meta-edc 1.1.0__py3-none-any.whl → 1.1.2__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (30) hide show
  1. meta_analytics/README.rst +1 -2
  2. meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py +8 -0
  3. meta_analytics/notebooks/endpoints/meta_endpoints_by_date.ipynb +38 -46
  4. meta_analytics/notebooks/monitoring_report.ipynb +329 -246
  5. meta_analytics/notebooks/qa.ipynb +265 -0
  6. meta_consent/admin/actions/create_missing_prescriptions.py +1 -1
  7. meta_consent/admin/modeladmin_mixins.py +1 -1
  8. meta_consent/management/commands/create_missing_prescriptions.py +1 -1
  9. meta_consent/models/signals.py +1 -1
  10. meta_edc/settings/debug.py +2 -2
  11. {meta_edc-1.1.0.dist-info → meta_edc-1.1.2.dist-info}/METADATA +4 -4
  12. {meta_edc-1.1.0.dist-info → meta_edc-1.1.2.dist-info}/RECORD +30 -29
  13. meta_labs/tests/test_reportables.py +1 -1
  14. meta_prn/admin/offschedule_pregnancy_admin.py +3 -3
  15. meta_prn/admin/onschedule_dm_referral_admin.py +5 -5
  16. meta_prn/form_validators/end_of_study.py +2 -2
  17. meta_reports/admin/last_imp_refill_admin.py +3 -2
  18. meta_reports/models/endpoints.py +3 -0
  19. meta_reports/tasks.py +3 -2
  20. meta_subject/action_items.py +1 -1
  21. meta_subject/form_validators/delivery_form_validator.py +1 -0
  22. meta_subject/forms/delivery_form.py +2 -0
  23. meta_subject/management/commands/create_missing_rx.py +1 -1
  24. meta_subject/migrations/0107_auto_20220415_0043.py +1 -1
  25. meta_subject/models/signals.py +1 -1
  26. meta_subject/tests/tests/test_study_medication.py +1 -2
  27. {meta_edc-1.1.0.dist-info → meta_edc-1.1.2.dist-info}/WHEEL +0 -0
  28. {meta_edc-1.1.0.dist-info → meta_edc-1.1.2.dist-info}/licenses/AUTHORS.rst +0 -0
  29. {meta_edc-1.1.0.dist-info → meta_edc-1.1.2.dist-info}/licenses/LICENSE +0 -0
  30. {meta_edc-1.1.0.dist-info → meta_edc-1.1.2.dist-info}/top_level.txt +0 -0
meta_analytics/notebooks/qa.ipynb ADDED
@@ -0,0 +1,265 @@
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+ {
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+ "cells": [
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "0",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "%%capture\n",
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+ "import os\n",
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+ "from pathlib import Path\n",
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+ "\n",
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+ "from dj_notebook import activate\n",
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+ "\n",
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+ "env_file = os.environ[\"META_ENV\"]\n",
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+ "reports_folder = Path(os.environ[\"META_REPORTS_FOLDER\"])\n",
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+ "analysis_folder = Path(os.environ[\"META_ANALYSIS_FOLDER\"])\n",
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+ "pharmacy_folder = Path(os.environ[\"META_PHARMACY_FOLDER\"])\n",
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+ "plus = activate(dotenv_file=env_file)"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "1",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "from edc_pharmacy.models import StockRequestItem, Stock, StockAdjustment\n",
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+ "from django_pandas.io import read_frame\n"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "2",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "Stock.objects.all().order_by(\"created\").last()"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "3",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "\n",
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+ "df = read_frame(StockRequestItem.objects.filter(stock_request__request_identifier=\"000122\"))"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "4",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "df.query(\"in_stock==False\")"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "5",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "StockRequestItem.objects.filter(received=True)"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "6",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "df = read_frame(Stock.objects.filter(from_stock__code=\"UGNXMR\"))\n"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "7",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "df[df[\"unit_qty_in\"]==0.0]"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "8",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "df[\"unit_qty_in\"].dtype"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "9",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj = Stock.objects.get(code=\"UGNXMR\")"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "10",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj.__dict__"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "11",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj.unit_qty_in"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "12",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj.unit_qty_out\n"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "13",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "for obj in Stock.objects.filter(container__container_type__name=\"bucket\"):\n",
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+ " obj.save()\n",
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+ " stock_code = obj.code\n",
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+ " stock_unit_qty_in = obj.unit_qty_in\n",
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+ " stock_unit_qty_out = obj.unit_qty_out\n",
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+ " from_stock_count = Stock.objects.filter(from_stock__code=obj.code).count() * 128\n",
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+ " \n",
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+ " \n",
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+ " if not stock_unit_qty_in >= stock_unit_qty_out:\n",
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+ " print(stock_code, stock_unit_qty_in, stock_unit_qty_out, from_stock_count)\n",
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+ " print(f\"**Error stock_code={stock_code}\")"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "14",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "15",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj_adjustment = StockAdjustment.objects.create(stock=obj, unit_qty_in_old=obj.unit_qty_in, unit_qty_in_new=24576.00)"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "16",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj.refresh_from_db()"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "17",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj.unit_qty_in"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "18",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "StockAdjustment.objects.all().delete()"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "19",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj_adjustment"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "20",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "obj_adjustment.__dict__"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "id": "21",
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+ "metadata": {},
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+ "outputs": [],
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+ "source": []
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+ }
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+ ],
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+ "metadata": {
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+ "kernelspec": {
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+ "display_name": "Python 3",
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+ "language": "python",
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+ "name": "python3"
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+ },
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+ "language_info": {
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+ "codemirror_mode": {
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+ "name": "ipython",
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+ "version": 2
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+ },
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+ "file_extension": ".py",
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+ "mimetype": "text/x-python",
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+ "name": "python",
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+ "nbconvert_exporter": "python",
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+ "pygments_lexer": "ipython2",
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+ "version": "2.7.6"
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+ }
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+ },
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+ "nbformat": 4,
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+ "nbformat_minor": 5
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+ }
meta_consent/admin/actions/create_missing_prescriptions.py CHANGED
@@ -24,7 +24,7 @@ def create_missing_metformin_rx(modeladmin, request, queryset):
24
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  subject_identifier=instance.subject_identifier,
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  report_datetime=instance.consent_datetime,
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  randomizer_name=get_meta_version(),
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- medications=[medication],
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+ medication_names=[medication.name],
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  site_id=instance.site.id,
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  )
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  except PrescriptionAlreadyExists:
meta_consent/admin/modeladmin_mixins.py CHANGED
@@ -127,7 +127,7 @@ class SubjectConsentModelAdminMixin:
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  subject_identifier=instance.subject_identifier,
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  report_datetime=instance.consent_datetime,
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  randomizer_name=get_meta_version(),
130
- medications=[medication],
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+ medication_names=[medication.name],
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  site_id=instance.site.id,
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  )
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  except PrescriptionAlreadyExists:
meta_consent/management/commands/create_missing_prescriptions.py CHANGED
@@ -25,7 +25,7 @@ class Command(BaseCommand):
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  subject_identifier=instance.subject_identifier,
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  report_datetime=instance.consent_datetime,
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  randomizer_name=get_meta_version(),
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- medications=[medication],
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+ medication_names=[medication.name],
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  site_id=instance.site.id,
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  )
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  except PrescriptionAlreadyExists:
meta_consent/models/signals.py CHANGED
@@ -66,7 +66,7 @@ def subject_consent_on_post_save(sender, instance, raw, created, **kwargs):
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  create_prescription(
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  subject_identifier=instance.subject_identifier,
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  report_datetime=instance.consent_datetime,
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- medications=[instance.study_medication_name],
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+ medication_names=[instance.study_medication_name],
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  randomizer_name=get_meta_version(),
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  site=instance.site,
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  )
meta_edc/settings/debug.py CHANGED
@@ -8,11 +8,11 @@ print(f"Settings file {__file__}")
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  # TZ Sites:
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  # SITE_ID = SiteID(default=20) # Amana
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- # SITE_ID = SiteID(default=10) # Hindu Mandal
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+ SITE_ID = SiteID(default=10) # Hindu Mandal
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  # SITE_ID = SiteID(default=40) # Mwananyamala
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  # SITE_ID = SiteID(default=50) # Mbagala
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  # SITE_ID = SiteID(default=60) # Mnazi-Moja
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- SITE_ID = SiteID(default=30) # Temeke
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+ # SITE_ID = SiteID(default=30) # Temeke
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  INDEX_PAGE = "http://localhost:8000"
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  EDC_SITES_UAT_DOMAIN = False
{meta_edc-1.1.0.dist-info → meta_edc-1.1.2.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: meta-edc
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- Version: 1.1.0
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+ Version: 1.1.2
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  Summary: META Trial EDC (http://www.isrctn.com/ISRCTN76157257)
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  Home-page: https://github.com/meta-trial/meta-edc
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  Author: Erik van Widenfelt
@@ -680,7 +680,7 @@ License: GNU GENERAL PUBLIC LICENSE
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  Public License instead of this License. But first, please read
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  <https://www.gnu.org/licenses/why-not-lgpl.html>.
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- Keywords: django,clinicedc,META EDC,EDC,clinical trials
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+ Keywords: django,clinicedc,META EDC,EDC,clinical trials,META Trial
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  Classifier: Environment :: Web Environment
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  Classifier: Framework :: Django
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  Classifier: Framework :: Django :: 5.2
@@ -688,13 +688,13 @@ Classifier: Intended Audience :: Developers
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  Classifier: Intended Audience :: Science/Research
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  Classifier: Operating System :: OS Independent
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  Classifier: Programming Language :: Python :: 3.12
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+ Classifier: Programming Language :: Python :: 3.13
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  Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
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  Requires-Python: >=3.12
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  Description-Content-Type: text/x-rst
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  License-File: LICENSE
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  License-File: AUTHORS.rst
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- Requires-Dist: edc==1.1.0
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- Requires-Dist: edc-microscopy
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+ Requires-Dist: edc==1.1.2
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  Requires-Dist: beautifulsoup4
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  Requires-Dist: celery[redis]
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  Requires-Dist: django-pylabels
{meta_edc-1.1.0.dist-info → meta_edc-1.1.2.dist-info}/RECORD RENAMED
@@ -81,7 +81,7 @@ meta_ae/tests/holidays.csv,sha256=Ywr5pK_caGUJMgRwLzjMeSEUuyEpUWyJE5aJkfbg3bg,53
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  meta_ae/tests/urls.py,sha256=BKiCB7JZCxtZFh6Ym-Y-Hdq92NECIt-GqMDyt6_B7o0,260
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  meta_ae/tests/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  meta_ae/tests/tests/test_actions.py,sha256=BrSbtCudm0ZZ8KGHA36exOx9mYfCslPk3JMRlcAOB8s,4879
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- meta_analytics/README.rst,sha256=x5KDks1P2bSPdyq3f9CNkynAAgJaXl7AX_3rnmC16HU,357
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+ meta_analytics/README.rst,sha256=TRjju_9l-FoV6YU9qBwlktJDjiK3yfvrSvMo7Rd4mc8,422
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  meta_analytics/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  meta_analytics/constants.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  meta_analytics/get_tables.py,sha256=3jFmvLXWHY3FPd1u5OPVpAKWUcruCH0-A0KdKiiFGpc,2219
@@ -96,7 +96,7 @@ meta_analytics/dataframes/get_last_imp_visits_df.py,sha256=cScwy_nBGHg04_AYpjz_p
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  meta_analytics/dataframes/utils.py,sha256=NNJ2EZmpSXJqa7jCoNgqd4F3irQ_93ZsNnv6PPIm7S8,2383
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  meta_analytics/dataframes/glucose_endpoints/__init__.py,sha256=a9RlAnFM0Z4AKw-WztBvnGMo3tLLe1dx3292A2n_CnA,107
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  meta_analytics/dataframes/glucose_endpoints/endpoint_by_date.py,sha256=4Qd3i9hfSSkn_El7QAjuJDUbzQ1LBpkmFw0rHSlBfG0,6531
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- meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py,sha256=Nr92PmfmaS_OPPp6hmK1OWZsOr3eQ5FMD5u_oDF8Ylk,13682
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+ meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py,sha256=6zl4rskh3I99zXOwpCX1qTuyn-5uciO_lo41ondFutI,13987
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  meta_analytics/dataframes/glucose_endpoints/utils.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  meta_analytics/dataframes/screening/__init__.py,sha256=onGpmB4474gu_JcyRGdRy09YQyP2Np-mX-rYZTFdJoA,114
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  meta_analytics/dataframes/screening/get_glucose_tested_only_df.py,sha256=0oMJIsIJRjurfpPONuJ4Aoab1UJikezGe3lQNWRoOo4,660
@@ -110,9 +110,10 @@ meta_analytics/notebooks/hiv_regimens.ipynb,sha256=qqRq5befPPiPQ8sheFhe6iGxPicaj
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  meta_analytics/notebooks/incidence.ipynb,sha256=-kd0Mp67dk8ECoNEcKMTn92iBxuNLBIOC6-qLvz-31U,8101
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  meta_analytics/notebooks/liver.ipynb,sha256=s19AAV6vmtGqYAfN1cqVIcBeU7ptSGU94uZaeaz32qU,13985
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  meta_analytics/notebooks/magreth.ipynb,sha256=u4BWz6swBFLXcrOQDi_iSuFkp9NiISFk5uPahh7iXug,20773
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- meta_analytics/notebooks/monitoring_report.ipynb,sha256=skRJrbuLSoQcKRdy-aYV--7lN0QfkCiQ0nOUmFbZWo4,74734
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+ meta_analytics/notebooks/monitoring_report.ipynb,sha256=BySeKJZ7MQPGQ6vbNNXW5JBJyNmTfvP_c8JGjskUF5U,77415
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  meta_analytics/notebooks/pharmacy.ipynb,sha256=rAxMyPDZIyx-Qizgrdueq-rUYyeN3zMYVqDPkbjtnSs,34298
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  meta_analytics/notebooks/pharmacy_stock_202410.ipynb,sha256=Kx9QVmiDW-5DWuaoSvLM2vJGHRCam-im9ZVdJsOBFfs,8823
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+ meta_analytics/notebooks/qa.ipynb,sha256=QuAoepwpC1nQLYC-HWM6khNIsPDU_s13gk1Iz2RjETk,5282
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  meta_analytics/notebooks/steering.ipynb,sha256=pqJrH_Zdwp7sPgHwhahKK-XmNMQjk7bHJv7vHJaeTek,1112
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  meta_analytics/notebooks/ven.ipynb,sha256=JR1_BW2QGqsqteCSORS7Zz7yD3u8JeU9r4H7KJ6nRN4,5182
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  meta_analytics/notebooks/vitals.ipynb,sha256=mHlO6QbhD28aGUhVI0tF06MJm_JjUsKLdSpnz5NhbQI,5787
@@ -120,7 +121,7 @@ meta_analytics/notebooks/cleaning/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeR
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  meta_analytics/notebooks/cleaning/consent_v1_ext.ipynb,sha256=HIo8lKtyAs3blx-UXEJful5iXT-0fGQcb5vAT-o7umk,6403
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  meta_analytics/notebooks/cleaning/offschedule_eos.ipynb,sha256=U5KS7GzWKsWkJWIN4pXhKN9GJMCpkGVxrIEBaRoaah8,10620
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  meta_analytics/notebooks/dsmc/renal_dysfunction.ipynb,sha256=vy40GuSA2HH3OoCBLaHx5fxYzS3mOV5C2L7BqSUGemM,11116
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- meta_analytics/notebooks/endpoints/meta_endpoints_by_date.ipynb,sha256=4UxnO4ijILwKlRvYd2D7_XE5fqBj3puQqYbggu4Ouf0,22526
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+ meta_analytics/notebooks/endpoints/meta_endpoints_by_date.ipynb,sha256=0B4Jm7xnNeUxDdNN1dQ2GwgHE61esHpsZo0SWvPrM0U,22392
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@@ -150,12 +151,12 @@ meta_consent/constants.py,sha256=w5n3B4jwUDDZEc4gMpkKeffsHqi724GnoABFtjmvbQk,78
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- meta_consent/admin/modeladmin_mixins.py,sha256=hMwrkwI7BrjpozvhxRtG1JiyLUWqs5_QNPluN_3Zous,5362
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+ meta_consent/admin/modeladmin_mixins.py,sha256=-46oE_9wyv7mx09lTb8WeTi-Pa5CFnY7pSaZD0KQJJo,5372
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+ meta_consent/admin/actions/create_missing_prescriptions.py,sha256=_2ikpDg07irOQboRwna4-nYvESJwi6Nb6yFHBwNcPc0,1484
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@@ -167,7 +168,7 @@ meta_consent/locale/lg/LC_MESSAGES/django.po,sha256=qWq1GuH-sIg05d2vydpYIxS71-fj
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+ meta_consent/management/commands/create_missing_prescriptions.py,sha256=T9qg3eOAIzjqQLSMaEa52kf4lGKW7P_2ar-F_e1WkeM,1448
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@@ -202,7 +203,7 @@ meta_consent/migrations/0031_alter_historicalsubjectconsent_guardian_name_and_mo
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- meta_consent/models/signals.py,sha256=WHaCDREbWOnUfmT01U_Nxiu5x4OIyV3wKRLd98vbfeQ,5152
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+ meta_consent/models/signals.py,sha256=9E6Vdj7OGdRS7g8tig0K1VsbyzpFlYfPoMSYHXQLS68,5157
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@@ -276,7 +277,7 @@ meta_edc/management/commands/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NM
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- meta_edc/settings/debug.py,sha256=t44__VfifcaagPTcm7lUVcjaIsBuM4IRyWz9xyNubDg,1297
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+ meta_edc/settings/debug.py,sha256=4BkeyJuOq3b_TJJr18tgoYSM7LZgnlz7CmJhTFiEt14,1297
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@@ -289,8 +290,8 @@ meta_edc/tests/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hS
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  meta_edc/views/home_view.py,sha256=BXydy77TcdcM0-R3S_uHI4DtfnLMIzPJMyqjFJZFSsA,916
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- meta_edc-1.1.0.dist-info/licenses/AUTHORS.rst,sha256=wL4KUOd7FAFThhkLAJxSLQ2BPzd3ikG9q0UVZr3BbLg,244
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- meta_edc-1.1.0.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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+ meta_edc-1.1.2.dist-info/licenses/AUTHORS.rst,sha256=wL4KUOd7FAFThhkLAJxSLQ2BPzd3ikG9q0UVZr3BbLg,244
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+ meta_edc-1.1.2.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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@@ -305,7 +306,7 @@ meta_labs/processing_profiles.py,sha256=fRX72FOl2rsnOJYhgup5QacfGSXKtWqn2gD3Giz2
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  meta_labs/reportables.py,sha256=OX1rxiWKmsi7_ODxH1O8yBGgOq56HAaiG1XTEDGaOhM,586
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- meta_labs/tests/test_reportables.py,sha256=nmNR7wumpkI84BqE3pCRqz7TuvprJXv9Kbtxs8P8U90,1302
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+ meta_labs/tests/test_reportables.py,sha256=VxTQDScHxaQP1PNut7i4ATr4hTqVpmYUjDK7HQJ7vOI,1302
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@@ -395,14 +396,14 @@ meta_prn/admin/off_study_medication_admin.py,sha256=pUc6vXvPuoAwTBxE24ztvqEOVSK4
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  meta_prn/admin/offschedule_admin.py,sha256=GzmBaCc09ehWZnE93cuzSqHZxUYvXj_Fg-eLi-1PqF0,1748
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  meta_prn/admin/offschedule_postnatal_admin.py,sha256=USGbZIFDuB1Wwu0t-avQg6dcTNiEvpQqvkBEdrZBYk4,1970
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- meta_prn/admin/offschedule_pregnancy_admin.py,sha256=aeX8NstvwmW8xG1xBjkGRzftFA9d04tzazh_RI8PRoY,2052
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+ meta_prn/admin/offschedule_pregnancy_admin.py,sha256=NN9tfWe5uxK8NQr6CQgc9TwXHLfDvAMAz5E3IO1mt9c,2058
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- meta_prn/admin/onschedule_dm_referral_admin.py,sha256=gfWE-NpHC4ICjKb1Fhb5XZUQ5syTp0s0_9IU1-ZTp0k,1470
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+ meta_prn/admin/onschedule_dm_referral_admin.py,sha256=9g7YOOYTOrRDHwzIm6uYH_nb3rJJEkEDsK6ZLlA0LHE,1480
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  meta_prn/admin/protocol_incident_admin.py,sha256=fTlYJAxsrPDB8skZc-_2DxKH21k_cG7UH7wCgnviBck,739
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- meta_prn/form_validators/end_of_study.py,sha256=BlTjp3LgOpl3bFzNHn3S8OoHNE7mNUQkvJArAnu09x4,13150
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+ meta_prn/form_validators/end_of_study.py,sha256=Qovfk0MV2CU-J0jAe9hyCfSQVQ3uAIMKa92uTVvwZDY,13128
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  meta_prn/form_validators/protocol_incident.py,sha256=g28qDxXpb-RiE4szn-KHFA03GcaAp0VWJ5SD5f3NUp8,1068
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  meta_prn/forms/__init__.py,sha256=rQX_sPN77qzktlfH46qQNcZ1yV1WvKThm2c-jzangNQ,565
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  meta_prn/forms/dm_referral_form.py,sha256=TvJSzKyVXXCOHRw67_i3BP9yEjAwE2yT5H6Y9bLRddU,1350
@@ -520,13 +521,13 @@ meta_reports/ae_report.py,sha256=K0DCdfVBOCqqWWvCsl-Tf8rRCnNv3W2xbUI10VCuEhI,154
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  meta_reports/death_report.py,sha256=mJw08jMxOWIAtsKQN8zCP64HIrxW1fb48D9OXqEMpM0,4713
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  meta_reports/pdf_report.py,sha256=9lWnRc_BNieDFXC4VgA0QHK6g_ct58u8tupPRsbRvV0,2395
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- meta_reports/tasks.py,sha256=wPzfm99Hox1AIvt1KxYg1r6g9v8ta2AHOHesoN6AxEk,370
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+ meta_reports/tasks.py,sha256=F4sqOGjRo6-XbGi2nDPDGb7XirzJAx-pWExNkzxCoDo,390
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  meta_reports/urls.py,sha256=_c6AMrK4U5MsyFSU2JSPNfiZlbhuw24C7CyPNYpqGd0,206
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  meta_reports/utils.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  meta_reports/admin/endpoints_admin.py,sha256=7wZCdC-D-QHI1bb_ucgyDZYlnYD7mWtcZpcH_LftkLs,514
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  meta_reports/admin/endpoints_all_admin.py,sha256=_czdezZf9fSjwZJmO-3HbmdXrXP6nk8-HdiweqUzPRE,476
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- meta_reports/admin/last_imp_refill_admin.py,sha256=RKODpodLqQsKx1v4ybqVULo38s2bNXd1nsUpCdPlJ1A,6431
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+ meta_reports/admin/last_imp_refill_admin.py,sha256=be8BEaUT9Ca5LkCdsPnGPsDeJyKm0brezBf9SDksPVc,6530
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  meta_reports/admin/list_filters.py,sha256=pByBzz9-qGwqBfdZFlByxJUZDTJQXOTWfNLjmK8KF00,870
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  meta_reports/admin/modeladmin_mixins.py,sha256=tEZYw0xNMfBvo2RLDrYfi_S9lbZU02dwtLxdRDZob4Q,3663
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  meta_reports/admin/dbviews/__init__.py,sha256=2yPu0SO7ZX9yjan0OS9izzws14YYoXcGXmZhwJhax1I,675
@@ -608,7 +609,7 @@ meta_reports/migrations/0057_auto_20250422_2224.py,sha256=pGj-5Cr__ScaNtb8ROzm_4
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  meta_reports/migrations/0058_auto_20250422_2232.py,sha256=SZ2RS5jUVhgnirgU2XAU-EIDtsbUWD1GDl5jg_hMTrc,9743
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- meta_reports/models/endpoints.py,sha256=iMx8QIi_hLANIwZmAw1OJ_jPuDdml8s181Skh8UF9bM,901
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+ meta_reports/models/endpoints.py,sha256=Y0AAQGWSqv60i2nQxUX1p5GlBG8fvRAuDVr_svGJZPM,1009
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  meta_reports/models/last_imp_refill.py,sha256=LkJtsZU7fhem5O-OqsyN-qgGQm_IUGAYEpP3ESqdm88,988
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  meta_reports/models/dbviews/README,sha256=GdeboB7Xqb-Qo_rE1ondcxP8Ps93MIjLzCePQCePig0,686
@@ -793,7 +794,7 @@ meta_stats/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,
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  meta_subject/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
796
- meta_subject/action_items.py,sha256=3wwqxwxYGApbfucy1hmemG6H-HzZNTMkwnOV_8Q4cYk,6869
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+ meta_subject/action_items.py,sha256=lIEH3G2s9JpbJkxKULB4p2yy2HEg9fhGcde7kK5A108,6870
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  meta_subject/admin_site.py,sha256=fxUn5QKgo6wYUG18HW11kVrPqWvmWV2_PzKbgZQM4pU,169
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  meta_subject/baker_recipes.py,sha256=C8ag5z5MRczzb3MkYGL37DccQg1FykiLgxepBlitlh0,2741
@@ -849,7 +850,7 @@ meta_subject/admin/health_economics/health_economics_simple_admin.py,sha256=1pmg
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  meta_subject/admin/health_economics/health_economics_update_admin.py,sha256=MGGm_mLlU8wd61TCvlMv6HPeNe6EAlDm0Yx5aDtMXc0,3889
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  meta_subject/form_validators/__init__.py,sha256=8RXC_zbXN7Q11qxuDP0ZegNSvjsL5UDhO9tao1dbUgc,555
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  meta_subject/form_validators/birth_outcomes_form_validator.py,sha256=vujgXKIW4z8bJ536_9uBhETlbChhUvA3Rj5H8zR3UfI,349
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- meta_subject/form_validators/delivery_form_validator.py,sha256=b1-B0KHjYoUyJ3WZ6KOz9YthxbPH-DJpQBEVmYnkQbM,3193
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+ meta_subject/form_validators/delivery_form_validator.py,sha256=tZuTWjzPAIG3qsg_sEHR_qJSmVKY8DwiE0XM5Ba_sUg,3194
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854
  meta_subject/form_validators/dm_endpoint_form_validator.py,sha256=XK7eZikVwBwSAe0cB8TJPSsoljDIEonKwJ4WoESGr58,1513
854
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  meta_subject/form_validators/dm_followup_form_validator.py,sha256=2ssfqmC8eKK0pwvi64dr0zOpioaNmJRtBtkj_YzTZY4,7962
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  meta_subject/form_validators/egfr_drop_notification_form_validator.py,sha256=y5MUdRriMo8C2Qj_yzebDWsDkjQsFhcqTGrP8tBuhfA,530
@@ -860,7 +861,7 @@ meta_subject/forms/__init__.py,sha256=LrGBLJ3Se3McgUOdcrDyTM4B7G8ChVCrxDq4DXiYDL
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  meta_subject/forms/birth_outcomes_form.py,sha256=qqhZNQKiYk8C8CFebZTQB0hOm4ONrgkTG7hfuK7kW-o,374
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  meta_subject/forms/complications_glycemia_form.py,sha256=yTm3qRDJ1wPuukmpf0s0lg-oXi8fZ5Y7D7T9V-CsOXk,375
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  meta_subject/forms/concomitant_medication_form.py,sha256=eznM4YOSV0eSsc-qaQgkga76T76Oz6i8svyBaleW-gQ,375
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- meta_subject/forms/delivery_form.py,sha256=PrPNGJVJf-YwNTTo1XcjSnup6Rgo6Eq9ADBw9PrI8Ds,447
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+ meta_subject/forms/delivery_form.py,sha256=L4WZqWbo9gz_BzxSdckh3e0v6DojOSoygD2xEcT4P78,484
864
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  meta_subject/forms/egfr_drop_notification_form.py,sha256=qQ5Q1aeGqzohD5FjBto1ThMP8iS-aNrA7I_OMrtVZFA,507
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  meta_subject/forms/eq53d3l_form.py,sha256=EE67-CAIRNKZCKpmQolC8wgL5MMIjXlkn5SXe3XdhN0,508
866
867
  meta_subject/forms/followup_examination_form.py,sha256=PATGiGn1AXmK1koXy1QjMvgn43KuZn7yyZIrA_8sPXk,502
@@ -902,7 +903,7 @@ meta_subject/forms/health_economics/health_economics_update_form.py,sha256=gpdBc
902
903
  meta_subject/locale/lg/LC_MESSAGES/django.po,sha256=rENk0A-EfLRxdK5GR05BBr7reDnp7bNy5Ton7PCtX48,11016
903
904
  meta_subject/locale/sw/LC_MESSAGES/django.po,sha256=kLgzLiTOTu6Rf8J5kmFH_R9MlPWvpVSwz4g9Rl2CdOw,11063
904
905
  meta_subject/management/commands/create_missing_refills.py,sha256=IkxEOV2AHl2FYhLDtiWmiK0SoAcGFz24pLUXjNpFAAA,2432
905
- meta_subject/management/commands/create_missing_rx.py,sha256=jAqgz9yxhaEL1XBN9FqM-5cPv1TpNtL4XdltLPArOEA,1463
906
+ meta_subject/management/commands/create_missing_rx.py,sha256=YIIvPHQMk9jWd9BG-Jn1vMKfdS-l4LUHWFsAojpMQiA,1468
906
907
  meta_subject/management/commands/missed.py,sha256=qTHggBxlJWcEF_V4cGtxe93UJXlaW-ON6m1SOpJzmgg,8209
907
908
  meta_subject/metadata_rules/__init__.py,sha256=U8fKGiHsbSWW27dWbTp2A2pCmdcFgybbJDhazP591cE,53
908
909
  meta_subject/metadata_rules/metadata_rules.py,sha256=CeZKXkr_sFsMlZK3CoU8buF51hqSH5hyxTWS92ZfBGk,4323
@@ -1013,7 +1014,7 @@ meta_subject/migrations/0103_auto_20220324_0326.py,sha256=gBiNh4-CElPRQcGqb04t4Y
1013
1014
  meta_subject/migrations/0104_auto_20220412_2151.py,sha256=lruwZFW9lyRzAJ-13bJZh19ZhFYMKX6k-TUjuXWIZAY,966
1014
1015
  meta_subject/migrations/0105_auto_20220412_2310.py,sha256=wEJsJDk_cwh-JW8ZPxg9HGE3YKKtOPRQJTo6xywX5nk,1290
1015
1016
  meta_subject/migrations/0106_auto_20220414_1741.py,sha256=tUQQG1JgKa_XrTL2Paz83YaEs8LhIl9gph5OyiV22nk,772
1016
- meta_subject/migrations/0107_auto_20220415_0043.py,sha256=PWxsJHxonC9L0nTWJnNF-oc3dcZfzkJPNvI38DYDbD8,1718
1017
+ meta_subject/migrations/0107_auto_20220415_0043.py,sha256=I-NrKxsgQBzdzY5G_fRaB4Qh_Nwa5JMv3YyYOV73c4k,1723
1017
1018
  meta_subject/migrations/0108_auto_20220415_1747.py,sha256=4HHVMatXiqavoutbzbZY7TlTHxg32uQYP7gHWg27DX8,688
1018
1019
  meta_subject/migrations/0109_auto_20220415_1758.py,sha256=FNBIWr0sCmXCvzI0yNVeMSrPup7vMQJhnYxrzHu9DSA,556
1019
1020
  meta_subject/migrations/0110_auto_20220512_1811.py,sha256=iKRSR0qkKbgOGQUT3zyz7SWN7kyrfJtFH98c1QTu8gM,2516
@@ -1164,7 +1165,7 @@ meta_subject/models/patient_history.py,sha256=q1GFQYoH0rYowBFUDUYebYthKSdTHNuDnz
1164
1165
  meta_subject/models/physical_exam.py,sha256=SlDJJQrCEouTMaETYGjjVzFYONVx6AdtalPioUCN9yg,1991
1165
1166
  meta_subject/models/pregnancy_update.py,sha256=Cs5bZAslR7jtDS_dJE_btHN8Jw21KdqKCHA-Ll9ISO0,949
1166
1167
  meta_subject/models/sf12.py,sha256=1f6cAMtBUXy7jMaacAU8RJFFv73r9c3rJjBbNl-bSM4,283
1167
- meta_subject/models/signals.py,sha256=N-Y-QmwSiiJnridHMrAm08YttRorjB9hzo9XTCdMzWk,4557
1168
+ meta_subject/models/signals.py,sha256=QzvOapE7d8H0qVabqR9Cyn9W6NSEv0-oscGWM1NeSpE,4562
1168
1169
  meta_subject/models/study_medication.py,sha256=1kA_w4pYT1gcunfiQ46KdM01pd1jrQqLt4JEPLvfTTo,461
1169
1170
  meta_subject/models/subject_requisition.py,sha256=bSDwD-hpXeioH3xA7E6eGMu4hxWLDDSxhznfjrpXTjw,341
1170
1171
  meta_subject/models/subject_visit.py,sha256=f49M7ywCQqdYdiT5dUhlWXTTXs5K6aKlxkMgzWyj3VE,2152
@@ -1206,7 +1207,7 @@ meta_subject/tests/tests/test_next_appointment.py,sha256=OVe6Jf6uaR5ch28skkNrr4h
1206
1207
  meta_subject/tests/tests/test_patient_history_form.py,sha256=JzqCx_-g2jeknngGl94FhZNVCl0CfnWIAZ9R11y7-wY,2827
1207
1208
  meta_subject/tests/tests/test_physical_exam.py,sha256=U3TKOPWTVu8iXxsS8LGgJJEY8e2sKJ5iTBcIWIHKCAo,2947
1208
1209
  meta_subject/tests/tests/test_sf12.py,sha256=5Daf-R4EeLjfDpsC5PZELfPIqY--joGzrj8nPVUiatI,6837
1209
- meta_subject/tests/tests/test_study_medication.py,sha256=EFvAvjxJ1c0Bk-vi6S8ejf9Q5UsQ8c0PSTw9l-1iHvo,10161
1210
+ meta_subject/tests/tests/test_study_medication.py,sha256=W84r5wneEHj6edTh5olLm1gKH87EPDkd2FsL1tdkFBQ,10105
1210
1211
  meta_visit_schedule/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
1211
1212
  meta_visit_schedule/apps.py,sha256=Uy3glJJ3-yCcXZ_MvhDEzxVxQbBuCTsZxLNmd5p1DHw,164
1212
1213
  meta_visit_schedule/constants.py,sha256=912H945Ae35K2z0DmJUMnkhacRFO4-Rg_y0HDOX861s,560
@@ -1238,7 +1239,7 @@ tests/etc/user-rsa-restricted-private.pem,sha256=CUcHW9bznWdmmASN00hCzvxFPAFl4N2
1238
1239
  tests/etc/user-rsa-restricted-public.pem,sha256=mt84djoL-uHw6Wc5SJh0zml6VzXulnf8eQSFg7-fheg,450
1239
1240
  tests/etc/user-salt-local.key,sha256=x5anBw9fvbHurczouT3CjrkWb_xs7Ypm1htIJsgiuiw,256
1240
1241
  tests/etc/user-salt-restricted.key,sha256=pxmpcfBRNB-4C6wTvHXz-9fOfJgKIFOjaAF8ZFfa4q4,256
1241
- meta_edc-1.1.0.dist-info/METADATA,sha256=y4ko2psjFD5hmV78bD3F57hp9ijr8ftfVDLjneZqm5I,43555
1242
- meta_edc-1.1.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
1243
- meta_edc-1.1.0.dist-info/top_level.txt,sha256=RkzjNXwRq2kg_uZ_1bDwPUntijSXoY2YBqtByDwvvrc,244
1244
- meta_edc-1.1.0.dist-info/RECORD,,
1242
+ meta_edc-1.1.2.dist-info/METADATA,sha256=LM6BQiFagSs5kCluCm8FI2iK3jlneg4-Ncq3wQWBO9A,43587
1243
+ meta_edc-1.1.2.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
1244
+ meta_edc-1.1.2.dist-info/top_level.txt,sha256=RkzjNXwRq2kg_uZ_1bDwPUntijSXoY2YBqtByDwvvrc,244
1245
+ meta_edc-1.1.2.dist-info/RECORD,,
meta_labs/tests/test_reportables.py CHANGED
@@ -33,5 +33,5 @@ class TestReportables(TestCase):
33
33
  GradingData.objects.filter(
34
34
  reference_range_collection=reference_range_collection
35
35
  ).count(),
36
- 172,
36
+ 174,
37
37
  )
meta_prn/admin/offschedule_pregnancy_admin.py CHANGED
@@ -48,6 +48,6 @@ class OffSchedulePregnancyAdmin(
48
48
  custom_fields = ("offschedule_datetime",)
49
49
  return custom_fields + tuple(f for f in list_filter if f not in custom_fields)
50
50
 
51
- def get_readonly_fields(self, request, obj=None) -> Tuple[str, ...]:
52
- custom_fields = ("subject_identifier", "offschedule_datetime")
53
- return tuple(set(super().get_readonly_fields(request, obj=obj) + custom_fields))
51
+ # def get_readonly_fields(self, request, obj=None) -> Tuple[str, ...]:
52
+ # custom_fields = ("subject_identifier", "offschedule_datetime")
53
+ # return tuple(set(super().get_readonly_fields(request, obj=obj) + custom_fields))
meta_prn/admin/onschedule_dm_referral_admin.py CHANGED
@@ -29,11 +29,11 @@ class OnScheduleDmReferralAdmin(
29
29
  custom_fields = ("onschedule_datetime",)
30
30
  return custom_fields + tuple(f for f in list_filter if f not in custom_fields)
31
31
 
32
- def get_readonly_fields(self, request, obj=None) -> Tuple[str, ...]:
33
- return (
34
- "subject_identifier",
35
- "onschedule_datetime",
36
- )
32
+ # def get_readonly_fields(self, request, obj=None) -> Tuple[str, ...]:
33
+ # return (
34
+ # "subject_identifier",
35
+ # "onschedule_datetime",
36
+ # )
37
37
 
38
38
  def get_search_fields(self, request) -> Tuple[str, ...]:
39
39
  return tuple(set(super().get_search_fields(request) + ("subject_identifier",)))
meta_prn/form_validators/end_of_study.py CHANGED
@@ -304,7 +304,7 @@ class EndOfStudyFormValidator(
304
304
  transfer_model_cls = django_apps.get_model("meta_prn.subjecttransfer")
305
305
  try:
306
306
  obj = transfer_model_cls.objects.get(
307
- subject_visit__subject_identifier=self.subject_identifier,
307
+ subject_identifier=self.subject_identifier,
308
308
  )
309
309
  except ObjectDoesNotExist:
310
310
  self.raise_validation_error(
@@ -317,7 +317,7 @@ class EndOfStudyFormValidator(
317
317
  INVALID_ERROR,
318
318
  )
319
319
  else:
320
- if obj.transfer_date.date() != self.cleaned_data.get("transfer_date"):
320
+ if obj.transfer_date != self.cleaned_data.get("transfer_date"):
321
321
  dt = formatted_date(obj.transfer_date)
322
322
  self.raise_validation_error(
323
323
  {
meta_reports/admin/last_imp_refill_admin.py CHANGED
@@ -13,6 +13,7 @@ from edc_qareports.modeladmin_mixins import QaReportModelAdminMixin
13
13
  from edc_sites.admin import SiteModelAdminMixin
14
14
  from edc_sites.admin.list_filters import SiteListFilter
15
15
  from edc_utils import get_utcnow
16
+ from rangefilter.filters import DateRangeFilterBuilder
16
17
 
17
18
  from meta_analytics.dataframes import get_last_imp_visits_df
18
19
 
@@ -101,8 +102,8 @@ class LastImpRefillAdmin(
101
102
  ]
102
103
 
103
104
  list_filter = [
104
- ImpVisitDateListFilter,
105
- NextApptDateListFilter,
105
+ ("imp_visit_date", DateRangeFilterBuilder()),
106
+ ("next_appt_date", DateRangeFilterBuilder()),
106
107
  "imp_visit_code",
107
108
  "next_visit_code",
108
109
  SiteListFilter,