meta-edc 0.3.38__py3-none-any.whl → 0.3.40__py3-none-any.whl

meta_pharmacy/labels/print_sheets.py

@@ -7,23 +7,34 @@ from reportlab.graphics.barcode.widgets import BarcodeStandard39
 from reportlab.graphics.charts.textlabels import Label as RlLabel
 from reportlab.graphics.shapes import String
 
-from meta_pharmacy.models import Label
+from ..models import LabelData
 
 
-class LabelData:
+class Label:
+    """
+    this should be based on a generated dataset using the stock transfer
+    request data.
 
-    def __init__(self, label: Label):
-        self.label = label
-        self.gender = label.rx.registered_subject.gender
-        self.site_id = label.rx.site_id
-        self.subject_identifier = label.rx.subject_identifier
-        self.reference = label.rx_label_reference
-        self.sid = label.rx.rando_sid
+    maybe include a printout for the site to review the IN-STOCK vs ORDER
+    status for each subject in a stock transfer request
+
+    subject1 IN-STOCK
+    subject2 ORDER
+    subject3 ORDER
+    """
+
+    def __init__(self, obj: LabelData):
+        self.label = obj
+        self.gender = obj.gender
+        self.site_id = obj.site_id
+        self.subject_identifier = obj.subject_identifier
+        self.reference = obj.reference
+        self.sid = obj.sid
         self.site_name = sites.get(self.site_id).title
 
 
-def draw_label(label, width, height, data: Label):
-    data = LabelData(data)
+def draw_label(label, width, height, data: LabelData):
+    data = Label(data)
     br = BarcodeStandard39(
         humanReadable=True, checksum=False, barHeight=30, barWidth=0.7, gap=1.7
     )

meta_pharmacy/list_data.py

@@ -0,0 +1,8 @@
+from edc_sites.site import sites as site_sites
+
+list_data = {
+    "edc_pharmacy.location": [
+        ("central", "Central"),
+        *[(ss.name, ss.description) for ss in site_sites.all(aslist=True)],
+    ],
+}

meta_pharmacy/management/commands/update_initial_pharmacy_data.py

@@ -0,0 +1,10 @@
+from django.core.management import BaseCommand
+
+from meta_pharmacy.utils import update_initial_pharmacy_data
+
+
+class Command(BaseCommand):
+
+    def handle(self, *args, **options):
+        update_initial_pharmacy_data()
+        print("Done")

meta_pharmacy/migrations/0002_initial.py

@@ -1,5 +1,7 @@
 # Generated by Django 5.1 on 2024-09-09 20:35
 
+import uuid
+
 import _socket
 import django.db.models.deletion
 import django_audit_fields.fields.hostname_modification_field
@@ -7,15 +9,15 @@ import django_audit_fields.fields.userfield
 import django_audit_fields.fields.uuid_auto_field
 import django_audit_fields.models.audit_model_mixin
 import django_revision.revision_field
-import edc_pharmacy.models.rx
+import edc_pharmacy.models.prescription.rx
 import edc_sites.managers
 import edc_utils.date
-import meta_pharmacy.models
 import simple_history.models
-import uuid
 from django.conf import settings
 from django.db import migrations, models
 
+import meta_pharmacy.models
+
 
 class Migration(migrations.Migration):
 
@@ -40,7 +42,7 @@ class Migration(migrations.Migration):
             },
             bases=("edc_pharmacy.rx",),
             managers=[
-                ("objects", edc_pharmacy.models.rx.Manager()),
+                ("objects", edc_pharmacy.models.prescription.rx.Manager()),
                 ("on_site", edc_sites.managers.CurrentSiteManager()),
             ],
         ),
@@ -293,7 +295,7 @@ class Migration(migrations.Migration):
                         null=True,
                         on_delete=django.db.models.deletion.DO_NOTHING,
                         related_name="+",
-                        to="edc_pharmacy.subject",
+                        to="edc_registration.registeredsubject",
                         verbose_name="Subject Identifier",
                     ),
                 ),

meta_pharmacy/migrations/0008_remove_lotnumber_medication_and_more.py

@@ -0,0 +1,390 @@
+# Generated by Django 5.1.2 on 2024-11-14 20:53
+
+import _socket
+import django.db.models.deletion
+import django_audit_fields.fields.hostname_modification_field
+import django_audit_fields.fields.userfield
+import django_audit_fields.fields.uuid_auto_field
+import django_audit_fields.models.audit_model_mixin
+import django_revision.revision_field
+import edc_sites.managers
+import simple_history.models
+import uuid
+from django.conf import settings
+from django.db import migrations, models
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("edc_registration", "0031_alter_historicalregisteredsubject_site_and_more"),
+        ("meta_pharmacy", "0007_lotnumber_medication"),
+        ("sites", "0002_alter_domain_unique"),
+        migrations.swappable_dependency(settings.AUTH_USER_MODEL),
+    ]
+
+    operations = [
+        migrations.RemoveField(
+            model_name="lotnumber",
+            name="medication",
+        ),
+        migrations.AlterField(
+            model_name="historicalrx",
+            name="registered_subject",
+            field=models.ForeignKey(
+                blank=True,
+                db_constraint=False,
+                null=True,
+                on_delete=django.db.models.deletion.DO_NOTHING,
+                related_name="+",
+                to="edc_registration.registeredsubject",
+                verbose_name="Subject Identifier",
+            ),
+        ),
+        migrations.CreateModel(
+            name="HistoricalLabelData",
+            fields=[
+                (
+                    "revision",
+                    django_revision.revision_field.RevisionField(
+                        blank=True,
+                        editable=False,
+                        help_text="System field. Git repository tag:branch:commit.",
+                        max_length=75,
+                        null=True,
+                        verbose_name="Revision",
+                    ),
+                ),
+                (
+                    "created",
+                    models.DateTimeField(
+                        blank=True,
+                        default=django_audit_fields.models.audit_model_mixin.utcnow,
+                    ),
+                ),
+                (
+                    "modified",
+                    models.DateTimeField(
+                        blank=True,
+                        default=django_audit_fields.models.audit_model_mixin.utcnow,
+                    ),
+                ),
+                (
+                    "user_created",
+                    django_audit_fields.fields.userfield.UserField(
+                        blank=True,
+                        help_text="Updated by admin.save_model",
+                        max_length=50,
+                        verbose_name="user created",
+                    ),
+                ),
+                (
+                    "user_modified",
+                    django_audit_fields.fields.userfield.UserField(
+                        blank=True,
+                        help_text="Updated by admin.save_model",
+                        max_length=50,
+                        verbose_name="user modified",
+                    ),
+                ),
+                (
+                    "hostname_created",
+                    models.CharField(
+                        blank=True,
+                        default=_socket.gethostname,
+                        help_text="System field. (modified on create only)",
+                        max_length=60,
+                        verbose_name="Hostname created",
+                    ),
+                ),
+                (
+                    "hostname_modified",
+                    django_audit_fields.fields.hostname_modification_field.HostnameModificationField(
+                        blank=True,
+                        help_text="System field. (modified on every save)",
+                        max_length=50,
+                        verbose_name="Hostname modified",
+                    ),
+                ),
+                (
+                    "device_created",
+                    models.CharField(blank=True, max_length=10, verbose_name="Device created"),
+                ),
+                (
+                    "device_modified",
+                    models.CharField(
+                        blank=True, max_length=10, verbose_name="Device modified"
+                    ),
+                ),
+                (
+                    "locale_created",
+                    models.CharField(
+                        blank=True,
+                        help_text="Auto-updated by Modeladmin",
+                        max_length=10,
+                        null=True,
+                        verbose_name="Locale created",
+                    ),
+                ),
+                (
+                    "locale_modified",
+                    models.CharField(
+                        blank=True,
+                        help_text="Auto-updated by Modeladmin",
+                        max_length=10,
+                        null=True,
+                        verbose_name="Locale modified",
+                    ),
+                ),
+                (
+                    "id",
+                    django_audit_fields.fields.uuid_auto_field.UUIDAutoField(
+                        blank=True,
+                        db_index=True,
+                        editable=False,
+                        help_text="System auto field. UUID primary key.",
+                    ),
+                ),
+                ("subject_identifier", models.CharField(max_length=15, null=True)),
+                ("sid", models.IntegerField(help_text="Pharmacy reference", null=True)),
+                (
+                    "reference",
+                    models.CharField(
+                        db_index=True,
+                        help_text="Bottle reference",
+                        max_length=10,
+                        null=True,
+                    ),
+                ),
+                ("site_name", models.CharField(max_length=15, null=True)),
+                ("gender", models.CharField(max_length=5, null=True)),
+                ("pills_per_bottle", models.IntegerField(default=128, null=True)),
+                ("printed_datetime", models.DateTimeField(null=True)),
+                ("printed", models.BooleanField(default=False)),
+                ("scanned", models.BooleanField(default=False)),
+                ("scanned_datetime", models.DateTimeField(null=True)),
+                ("received_datetime", models.DateTimeField(null=True)),
+                (
+                    "received",
+                    models.BooleanField(default=False, help_text="Received at site"),
+                ),
+                (
+                    "dispensed",
+                    models.BooleanField(default=False, help_text="Dispensed to clinic"),
+                ),
+                ("dispensed_datetime", models.DateTimeField(null=True)),
+                (
+                    "crf",
+                    models.BooleanField(default=False, help_text="Entered into subject's CRF"),
+                ),
+                ("crf_datetime", models.DateTimeField(null=True)),
+                (
+                    "history_id",
+                    models.UUIDField(
+                        default=uuid.uuid4,
+                        editable=False,
+                        primary_key=True,
+                        serialize=False,
+                    ),
+                ),
+                ("history_date", models.DateTimeField(db_index=True)),
+                ("history_change_reason", models.CharField(max_length=100, null=True)),
+                (
+                    "history_type",
+                    models.CharField(
+                        choices=[("+", "Created"), ("~", "Changed"), ("-", "Deleted")],
+                        max_length=1,
+                    ),
+                ),
+                (
+                    "history_user",
+                    models.ForeignKey(
+                        null=True,
+                        on_delete=django.db.models.deletion.SET_NULL,
+                        related_name="+",
+                        to=settings.AUTH_USER_MODEL,
+                    ),
+                ),
+                (
+                    "site",
+                    models.ForeignKey(
+                        blank=True,
+                        db_constraint=False,
+                        null=True,
+                        on_delete=django.db.models.deletion.DO_NOTHING,
+                        related_name="+",
+                        to="sites.site",
+                    ),
+                ),
+            ],
+            options={
+                "verbose_name": "historical Label Data",
+                "verbose_name_plural": "historical Label Data",
+                "ordering": ("-history_date", "-history_id"),
+                "get_latest_by": ("history_date", "history_id"),
+            },
+            bases=(simple_history.models.HistoricalChanges, models.Model),
+        ),
+        migrations.CreateModel(
+            name="LabelData",
+            fields=[
+                (
+                    "revision",
+                    django_revision.revision_field.RevisionField(
+                        blank=True,
+                        editable=False,
+                        help_text="System field. Git repository tag:branch:commit.",
+                        max_length=75,
+                        null=True,
+                        verbose_name="Revision",
+                    ),
+                ),
+                (
+                    "created",
+                    models.DateTimeField(
+                        blank=True,
+                        default=django_audit_fields.models.audit_model_mixin.utcnow,
+                    ),
+                ),
+                (
+                    "modified",
+                    models.DateTimeField(
+                        blank=True,
+                        default=django_audit_fields.models.audit_model_mixin.utcnow,
+                    ),
+                ),
+                (
+                    "user_created",
+                    django_audit_fields.fields.userfield.UserField(
+                        blank=True,
+                        help_text="Updated by admin.save_model",
+                        max_length=50,
+                        verbose_name="user created",
+                    ),
+                ),
+                (
+                    "user_modified",
+                    django_audit_fields.fields.userfield.UserField(
+                        blank=True,
+                        help_text="Updated by admin.save_model",
+                        max_length=50,
+                        verbose_name="user modified",
+                    ),
+                ),
+                (
+                    "hostname_created",
+                    models.CharField(
+                        blank=True,
+                        default=_socket.gethostname,
+                        help_text="System field. (modified on create only)",
+                        max_length=60,
+                        verbose_name="Hostname created",
+                    ),
+                ),
+                (
+                    "hostname_modified",
+                    django_audit_fields.fields.hostname_modification_field.HostnameModificationField(
+                        blank=True,
+                        help_text="System field. (modified on every save)",
+                        max_length=50,
+                        verbose_name="Hostname modified",
+                    ),
+                ),
+                (
+                    "device_created",
+                    models.CharField(blank=True, max_length=10, verbose_name="Device created"),
+                ),
+                (
+                    "device_modified",
+                    models.CharField(
+                        blank=True, max_length=10, verbose_name="Device modified"
+                    ),
+                ),
+                (
+                    "locale_created",
+                    models.CharField(
+                        blank=True,
+                        help_text="Auto-updated by Modeladmin",
+                        max_length=10,
+                        null=True,
+                        verbose_name="Locale created",
+                    ),
+                ),
+                (
+                    "locale_modified",
+                    models.CharField(
+                        blank=True,
+                        help_text="Auto-updated by Modeladmin",
+                        max_length=10,
+                        null=True,
+                        verbose_name="Locale modified",
+                    ),
+                ),
+                (
+                    "id",
+                    django_audit_fields.fields.uuid_auto_field.UUIDAutoField(
+                        blank=True,
+                        editable=False,
+                        help_text="System auto field. UUID primary key.",
+                        primary_key=True,
+                        serialize=False,
+                    ),
+                ),
+                ("subject_identifier", models.CharField(max_length=15, null=True)),
+                ("sid", models.IntegerField(help_text="Pharmacy reference", null=True)),
+                (
+                    "reference",
+                    models.CharField(
+                        help_text="Bottle reference",
+                        max_length=10,
+                        null=True,
+                        unique=True,
+                    ),
+                ),
+                ("site_name", models.CharField(max_length=15, null=True)),
+                ("gender", models.CharField(max_length=5, null=True)),
+                ("pills_per_bottle", models.IntegerField(default=128, null=True)),
+                ("printed_datetime", models.DateTimeField(null=True)),
+                ("printed", models.BooleanField(default=False)),
+                ("scanned", models.BooleanField(default=False)),
+                ("scanned_datetime", models.DateTimeField(null=True)),
+                ("received_datetime", models.DateTimeField(null=True)),
+                (
+                    "received",
+                    models.BooleanField(default=False, help_text="Received at site"),
+                ),
+                (
+                    "dispensed",
+                    models.BooleanField(default=False, help_text="Dispensed to clinic"),
+                ),
+                ("dispensed_datetime", models.DateTimeField(null=True)),
+                (
+                    "crf",
+                    models.BooleanField(default=False, help_text="Entered into subject's CRF"),
+                ),
+                ("crf_datetime", models.DateTimeField(null=True)),
+                (
+                    "site",
+                    models.ForeignKey(
+                        null=True,
+                        on_delete=django.db.models.deletion.PROTECT,
+                        related_name="+",
+                        to="sites.site",
+                    ),
+                ),
+            ],
+            options={
+                "verbose_name": "Label Data",
+                "verbose_name_plural": "Label Data",
+            },
+            managers=[
+                ("on_site", edc_sites.managers.CurrentSiteManager()),
+            ],
+        ),
+        migrations.DeleteModel(
+            name="Label",
+        ),
+        migrations.DeleteModel(
+            name="LotNumber",
+        ),
+    ]

meta_pharmacy/migrations/0009_remove_historicalrx_slug.py

@@ -0,0 +1,17 @@
+# Generated by Django 5.1.2 on 2024-11-19 11:42
+
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_pharmacy", "0008_remove_lotnumber_medication_and_more"),
+    ]
+
+    operations = [
+        migrations.RemoveField(
+            model_name="historicalrx",
+            name="slug",
+        ),
+    ]

meta_pharmacy/models/__init__.py

@@ -1,4 +1,3 @@
-from .label import Label
-from .lot_number import LotNumber
+from .label_data import LabelData
 from .rx import Rx
 from .substitutions import MyManager, Substitutions

meta_pharmacy/models/label_data.py

@@ -0,0 +1,38 @@
+import random
+
+import edc_model.models
+from django.db import models
+from edc_model.models import BaseUuidModel
+from edc_sites.model_mixins import SiteModelMixin
+
+random.seed(237548)
+
+
+class LabelData(SiteModelMixin, BaseUuidModel):
+
+    subject_identifier = models.CharField(max_length=15, null=True)
+    sid = models.IntegerField(null=True, help_text="Pharmacy reference")
+    reference = models.CharField(
+        max_length=10, null=True, unique=True, help_text="Bottle reference"
+    )
+    site_name = models.CharField(max_length=15, null=True)
+    gender = models.CharField(max_length=5, null=True)
+    pills_per_bottle = models.IntegerField(null=True, default=128)
+
+    printed_datetime = models.DateTimeField(null=True)
+    printed = models.BooleanField(default=False)
+    scanned = models.BooleanField(default=False)
+    scanned_datetime = models.DateTimeField(null=True)
+
+    received_datetime = models.DateTimeField(null=True)
+    received = models.BooleanField(default=False, help_text="Received at site")
+    dispensed = models.BooleanField(default=False, help_text="Dispensed to clinic")
+    dispensed_datetime = models.DateTimeField(null=True)
+    crf = models.BooleanField(default=False, help_text="Entered into subject's CRF")
+    crf_datetime = models.DateTimeField(null=True)
+
+    history = edc_model.models.HistoricalRecords()
+
+    class Meta:
+        verbose_name = "Label Data"
+        verbose_name_plural = "Label Data"

meta_pharmacy/models/{label.py → rx_label.py}

@@ -1,8 +1,8 @@
 from django.db import models
 from edc_identifier.simple_identifier import SimpleUniqueIdentifier
 from edc_model.models import BaseUuidModel
+from edc_pharmacy.models import Lot
 
-from .lot_number import LotNumber
 from .rx import Rx
 
 
@@ -12,14 +12,13 @@ class LabelIdentifier(SimpleUniqueIdentifier):
     template = "{random_string}"
 
 
-class Label(BaseUuidModel):
+class RxLabel(BaseUuidModel):
 
     identifier_cls = LabelIdentifier
-    identifier_field_name: str = "rx_label_reference"
 
     rx = models.ForeignKey(Rx, on_delete=models.PROTECT)
-    lot_no = models.ForeignKey(LotNumber, on_delete=models.PROTECT)
-    rx_label_reference = models.CharField(max_length=15, unique=True)
+    lot = models.ForeignKey(Lot, on_delete=models.PROTECT)
+    label_identifier = models.CharField(max_length=15, unique=True)
 
     printed_datetime = models.DateTimeField(null=True)
     printed = models.BooleanField(default=False)
@@ -27,23 +26,13 @@ class Label(BaseUuidModel):
     scanned_datetime = models.DateTimeField(null=True)
 
     def __str__(self):
-        return self.rx_label_reference
+        return self.label_identifier
 
     def save(self, *args, **kwargs):
-        """Label referenceis always allocated."""
+        """Label reference is always allocated."""
         if not self.id:
-            setattr(
-                self,
-                self.identifier_field_name,
-                self.identifier_cls().identifier,
-            )
-        super().save(*args, **kwargs)  # type:ignore
-
-    @property
-    def human_readable_identifier(self):
-        """Returns a humanized screening identifier."""
-        x = self.screening_identifier
-        return f"{x[0:4]}-{x[4:]}"
+            self.label_identifier = self.identifier_cls().identifier
+        super().save(*args, **kwargs)
 
     class Meta(BaseUuidModel.Meta):
         verbose_name = "Label"

meta_pharmacy/utils/__init__.py

@@ -0,0 +1 @@
+from .update_initial_pharmacy_data import update_initial_pharmacy_data