megadetector 5.0.12__py3-none-any.whl → 5.0.14__py3-none-any.whl

megadetector/utils/path_utils.py

@@ -733,9 +733,13 @@ def _get_file_size(filename,verbose=False):
     return (filename,size)
 
     
-def parallel_get_file_sizes(filenames, max_workers=16, 
-                        use_threads=True, verbose=False,
-                        recursive=True):
+def parallel_get_file_sizes(filenames, 
+                            max_workers=16, 
+                            use_threads=True, 
+                            verbose=False,
+                            recursive=True, 
+                            convert_slashes=True,
+                            return_relative_paths=False):
     """
     Returns a dictionary mapping every file in [filenames] to the corresponding file size,
     or None for errors.  If [filenames] is a folder, will enumerate the folder (optionally recursively).
@@ -747,6 +751,10 @@ def parallel_get_file_sizes(filenames, max_workers=16,
         use_threads (bool, optional): whether to use threads (True) or processes (False) for
             parallel copying; ignored if max_workers <= 1
         verbose (bool, optional): enable additionald debug output
+        recursive (bool, optional): enumerate recursively, only relevant if [filenames] is a folder.
+        convert_slashes (bool, optional): convert backslashes to forward slashes
+        return_relative_paths (bool, optional): return relative paths; only relevant if [filenames]
+            is a folder.
         
     Returns:
         dict: dictionary mapping filenames to file sizes in bytes
@@ -754,20 +762,45 @@ def parallel_get_file_sizes(filenames, max_workers=16,
 
     n_workers = min(max_workers,len(filenames))
     
+    folder_name = None
+    
+    if verbose:
+        print('Enumerating files')
+        
     if isinstance(filenames,str) and os.path.isdir(filenames):
+        
+        folder_name = filenames
+        
+        # Enumerate absolute paths here, we'll convert to relative later if requested
         filenames = recursive_file_list(filenames,recursive=recursive,return_relative_paths=False)
+
+    if verbose:
+        print('Creating worker pool')
     
     if use_threads:
+        pool_string = 'thread'
         pool = ThreadPool(n_workers)
     else:
+        pool_string = 'process'
         pool = Pool(n_workers)
 
-    resize_results = list(tqdm(pool.imap(
+    if verbose:
+        print('Created a {} pool of {} workers'.format(
+            pool_string,n_workers))
+        
+    # This returns (filename,size) tuples
+    get_size_results = list(tqdm(pool.imap(
         partial(_get_file_size,verbose=verbose),filenames), total=len(filenames)))
     
     to_return = {}
-    for r in resize_results:
-        to_return[r[0]] = r[1]
+    for r in get_size_results:
+        fn = r[0]
+        if return_relative_paths and (folder_name is not None):
+            fn = os.path.relpath(fn,folder_name)
+        if convert_slashes:
+            fn = fn.replace('\\','/')
+        size = r[1]
+        to_return[fn] = size
 
     return to_return
 

megadetector/utils/process_utils.py

@@ -15,8 +15,6 @@ Includes handy example code for doing this on multiple processes/threads.
 import os
 import subprocess
 
-os.environ["PYTHONUNBUFFERED"] = "1"
-
 def execute(cmd,encoding=None,errors=None,env=None,verbose=False):
     """
     Run [cmd] (a single string) in a shell, yielding each line of output to the caller.
@@ -37,6 +35,8 @@ def execute(cmd,encoding=None,errors=None,env=None,verbose=False):
         int: the command's return code, always zero, otherwise a CalledProcessError is raised    
     """
     
+    os.environ["PYTHONUNBUFFERED"] = "1"
+    
     if verbose: 
         if encoding is not None:
             print('Launching child process with non-default encoding {}'.format(encoding))
@@ -59,7 +59,9 @@ def execute(cmd,encoding=None,errors=None,env=None,verbose=False):
     return return_code
 
 
-def execute_and_print(cmd,print_output=True,encoding=None,errors=None,env=None,verbose=False):
+def execute_and_print(cmd,print_output=True,encoding=None,errors=None,
+                      env=None,verbose=False,catch_exceptions=True,
+                      echo_command=False):
     """
     Run [cmd] (a single string) in a shell, capturing and printing output.  Returns
     a dictionary with fields "status" and "output".
@@ -76,12 +78,17 @@ def execute_and_print(cmd,print_output=True,encoding=None,errors=None,env=None,v
         errors (str, optional): error handling, see Popen() documentation
         env (dict, optional): environment variables, see Popen() documentation
         verbose (bool, optional): enable additional debug console output
-    
+        catch_exceptions (bool, optional): catch exceptions and include in the output, otherwise raise
+        echo_command (bool, optional): print the command before executing
+        
     Returns:
         dict: a dictionary with fields "status" (the process return code) and "output"
         (the content of stdout)    
     """
 
+    if echo_command:
+        print('Running command:\n{}\n'.format(cmd))
+        
     to_return = {'status':'unknown','output':''}
     output = []
     try:
@@ -91,6 +98,8 @@ def execute_and_print(cmd,print_output=True,encoding=None,errors=None,env=None,v
                 print(s,end='',flush=True)
         to_return['status'] = 0
     except subprocess.CalledProcessError as cpe:
+        if not catch_exceptions:
+            raise
         print('execute_and_print caught error: {} ({})'.format(cpe.output,str(cpe)))
         to_return['status'] = cpe.returncode
     to_return['output'] = output

megadetector/visualization/visualization_utils.py

@@ -1457,7 +1457,8 @@ def parallel_check_image_integrity(filenames,
                                    modes=None, 
                                    max_workers=16, 
                                    use_threads=True, 
-                                   recursive=True):
+                                   recursive=True,
+                                   verbose=False):
     """
     Check whether we can successfully load a list of images via OpenCV and/or PIL.
     
@@ -1470,6 +1471,7 @@ def parallel_check_image_integrity(filenames,
             parallelization
         recursive (bool, optional): if [filenames] is a folder, whether to search recursively for images.
             Ignored if [filenames] is a list.
+        verbose (bool, optional): enable additional debug output
             
     Returns:
         list: a list of dicts, each with a key called 'file' (the value of [filename]), one key for 
@@ -1480,9 +1482,12 @@ def parallel_check_image_integrity(filenames,
     n_workers = min(max_workers,len(filenames))
     
     if isinstance(filenames,str) and os.path.isdir(filenames):
+        if verbose:
+            print('Enumerating images in {}'.format(filenames))
         filenames = find_images(filenames,recursive=recursive,return_relative_paths=False)
     
-    print('Checking image integrity for {} filenames'.format(len(filenames)))
+    if verbose:
+        print('Checking image integrity for {} filenames'.format(len(filenames)))
     
     if n_workers <= 1:
         

megadetector/visualization/visualize_db.py

@@ -40,86 +40,88 @@ class DbVizOptions:
     Parameters controlling the behavior of visualize_db().
     """
     
-    #: Number of images to sample from the database, or None to visualize all images
-    num_to_visualize = None
-    
-    #: Target size for rendering; set either dimension to -1 to preserve aspect ratio.
-    #:
-    #: If viz_size is None or (-1,-1), the original image size is used.
-    viz_size = (800, -1)
-    
-    #: HTML rendering options; see write_html_image_list for details
-    #:
-    #:The most relevant option one might want to set here is:
-    #:
-    #: htmlOptions['maxFiguresPerHtmlFile']
-    #:
-    #: ...which can be used to paginate previews to a number of images that will load well
-    #: in a browser (5000 is a reasonable limit).
-    htmlOptions = write_html_image_list()
-    
-    #: Whether to sort images by filename (True) or randomly (False)
-    sort_by_filename = True
-    
-    #: Only show images that contain bounding boxes
-    trim_to_images_with_bboxes = False
-    
-    #: Random seed to use for sampling images
-    random_seed = 0
-    
-    #: Should we include Web search links for each category name?    
-    add_search_links = False
-    
-    #: Should each thumbnail image link back to the original image?
-    include_image_links = False
-    
-    #: Should there be a text link back to each original image?
-    include_filename_links = False
-    
-    #: Line width in pixels
-    box_thickness = 4
-    
-    #: Number of pixels to expand each bounding box
-    box_expansion = 0
-    
-    #: Only include images that contain annotations with these class names (not IDs)
-    #:
-    #: Mutually exclusive with classes_to_exclude
-    classes_to_include = None
-    
-    #: Exclude images that contain annotations with these class names (not IDs)
-    #:
-    #: Mutually exclusive with classes_to_include
-    classes_to_exclude = None
-    
-    #: Special tag used to say "show me all images with multiple categories"
-    #:
-    #: :meta private:
-    multiple_categories_tag = '*multiple*'
-
-    #: We sometimes flatten image directories by replacing a path separator with 
-    #: another character.  Leave blank for the typical case where this isn't necessary.
-    pathsep_replacement = '' # '~'
-
-    #: Parallelize rendering across multiple workers
-    parallelize_rendering = False
-    
-    #: In theory, whether to parallelize with threads (True) or processes (False), but
-    #: process-based parallelization in this function is currently unsupported
-    parallelize_rendering_with_threads = True
-    
-    #: Number of workers to use for parallelization; ignored if parallelize_rendering
-    #: is False
-    parallelize_rendering_n_cores = 25
+    def __init__(self):
+        
+        #: Number of images to sample from the database, or None to visualize all images
+        self.num_to_visualize = None
+        
+        #: Target size for rendering; set either dimension to -1 to preserve aspect ratio.
+        #:
+        #: If viz_size is None or (-1,-1), the original image size is used.
+        self.viz_size = (800, -1)
+        
+        #: HTML rendering options; see write_html_image_list for details
+        #:
+        #:The most relevant option one might want to set here is:
+        #:
+        #: htmlOptions['maxFiguresPerHtmlFile']
+        #:
+        #: ...which can be used to paginate previews to a number of images that will load well
+        #: in a browser (5000 is a reasonable limit).
+        self.htmlOptions = write_html_image_list()
+        
+        #: Whether to sort images by filename (True) or randomly (False)
+        self.sort_by_filename = True
+        
+        #: Only show images that contain bounding boxes
+        self.trim_to_images_with_bboxes = False
+        
+        #: Random seed to use for sampling images
+        self.random_seed = 0
+        
+        #: Should we include Web search links for each category name?    
+        self.add_search_links = False
         
-    #: Should we show absolute (True) or relative (False) paths for each image?
-    show_full_paths = False
+        #: Should each thumbnail image link back to the original image?
+        self.include_image_links = False
+        
+        #: Should there be a text link back to each original image?
+        self.include_filename_links = False
+        
+        #: Line width in pixels
+        self.box_thickness = 4
+        
+        #: Number of pixels to expand each bounding box
+        self.box_expansion = 0
+        
+        #: Only include images that contain annotations with these class names (not IDs)
+        #:
+        #: Mutually exclusive with classes_to_exclude
+        self.classes_to_include = None
+        
+        #: Exclude images that contain annotations with these class names (not IDs)
+        #:
+        #: Mutually exclusive with classes_to_include
+        self.classes_to_exclude = None
+        
+        #: Special tag used to say "show me all images with multiple categories"
+        #:
+        #: :meta private:
+        self.multiple_categories_tag = '*multiple*'
     
-    #: Set to False to skip existing images
-    force_rendering = True
+        #: We sometimes flatten image directories by replacing a path separator with 
+        #: another character.  Leave blank for the typical case where this isn't necessary.
+        self.pathsep_replacement = '' # '~'
     
-    #: Enable additionald debug console output
-    verbose = False
+        #: Parallelize rendering across multiple workers
+        self.parallelize_rendering = False
+        
+        #: In theory, whether to parallelize with threads (True) or processes (False), but
+        #: process-based parallelization in this function is currently unsupported
+        self.parallelize_rendering_with_threads = True
+        
+        #: Number of workers to use for parallelization; ignored if parallelize_rendering
+        #: is False
+        self.parallelize_rendering_n_cores = 25
+            
+        #: Should we show absolute (True) or relative (False) paths for each image?
+        self.show_full_paths = False
+        
+        #: Set to False to skip existing images
+        self.force_rendering = True
+        
+        #: Enable additionald debug console output
+        self.verbose = False
     
 
 #%% Helper functions

megadetector/visualization/visualize_detector_output.py

@@ -174,7 +174,6 @@ def visualize_detector_output(detector_output_path,
         f'Confidence threshold {confidence_threshold} is invalid, must be in (0, 1).')
     
     if 'detection_categories' in detector_output:
-        print('Using custom label mapping')
         detector_label_map = detector_output['detection_categories']
     else:
         detector_label_map = DEFAULT_DETECTOR_LABEL_MAP

{megadetector-5.0.12.dist-info → megadetector-5.0.14.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: megadetector
-Version: 5.0.12
+Version: 5.0.14
 Summary: MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.
 Author-email: Your friendly neighborhood MegaDetector team <cameratraps@lila.science>
 Maintainer-email: Your friendly neighborhood MegaDetector team <cameratraps@lila.science>
@@ -114,7 +114,7 @@ print('Found {} detections above threshold'.format(len(detections_above_threshol
 
 ```
 from megadetector.detection.run_detector_batch import \
-    load_and_run_detector_batch,write_results_to_file
+    load_and_run_detector_batch, write_results_to_file
 from megadetector.utils import path_utils
 import os
 

{megadetector-5.0.12.dist-info → megadetector-5.0.14.dist-info}/RECORD

@@ -1,13 +1,13 @@
 megadetector/api/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/api/batch_processing/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/api/batch_processing/api_core/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-megadetector/api/batch_processing/api_core/server.py,sha256=BNqM5EK29B0haCW7rdeOzVqcCJDziZiD0Etc1mPs56c,11668
-megadetector/api/batch_processing/api_core/server_api_config.py,sha256=G8X5wgqEXPrWWQpgDI9ua-JktiUgy9mOpEltXSIazLQ,3318
+megadetector/api/batch_processing/api_core/server.py,sha256=-g6hfaSp7dUaT-2-bUSXkLE-MJnig3gZ3W_GbNkoAE0,11618
+megadetector/api/batch_processing/api_core/server_api_config.py,sha256=AjmLStXYoMMwxZJSephYROEprcSkG5RPlOr7Zho9xLk,3277
 megadetector/api/batch_processing/api_core/server_app_config.py,sha256=tQCFsFv0wJCegHfnu-Za3okdXwEd4U522hiM0YGNkMY,1860
 megadetector/api/batch_processing/api_core/server_batch_job_manager.py,sha256=K7fMFBJA8Z1SkA4eBM-nymcq7VQjwZ6ZRaNnNKFlat8,10324
-megadetector/api/batch_processing/api_core/server_job_status_table.py,sha256=3fJrdyeoVLGbbbdKy7cAVL_ZHbCmCQ2o5D26jBBQRJo,6239
+megadetector/api/batch_processing/api_core/server_job_status_table.py,sha256=P621Df7RTTKqW8VlxnCqkBtIO4Ko5bSS6WbU0ETzPGY,5984
 megadetector/api/batch_processing/api_core/server_orchestration.py,sha256=LYHABzhOvP0NrM1VIjI6Vwb95YZ5xjQ52mUJW8oIOQ0,17003
-megadetector/api/batch_processing/api_core/server_utils.py,sha256=oFusP1E29op5DN1nEaR-jQZgRExqMDdzmRL6BHj8EDk,3314
+megadetector/api/batch_processing/api_core/server_utils.py,sha256=uJvnW50lSE_LnRtEyrFI2dbVSecmGudaRhUH6NcAx1M,3100
 megadetector/api/batch_processing/api_core/batch_service/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/api/batch_processing/api_core/batch_service/score.py,sha256=_hjUBIe0s9wmpmQwwDg-fd7tJMCn8735zJcgF15mTFo,17354
 megadetector/api/batch_processing/api_core_support/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -18,12 +18,12 @@ megadetector/api/batch_processing/data_preparation/__init__.py,sha256=47DEQpj8HB
 megadetector/api/batch_processing/integration/digiKam/setup.py,sha256=7P1X3JYrBDXmLUeLRrzxNfDkL5lo-pY8nXsp9Cz8rOI,203
 megadetector/api/batch_processing/integration/digiKam/xmp_integration.py,sha256=zk5s7dD-FIkNnRxECT-0TAuBw7R__Or5_ft7Ha3iqMM,17774
 megadetector/api/batch_processing/integration/eMammal/test_scripts/config_template.py,sha256=UnvrgaFRBu59MuVUJa2WpG8ebcOJWcNeZEx6GWuYLzc,73
-megadetector/api/batch_processing/integration/eMammal/test_scripts/push_annotations_to_emammal.py,sha256=_mfKTNfLtQKaOK5YuG5mTm_Q_24_0K4wR3eLzJwXVPs,3607
+megadetector/api/batch_processing/integration/eMammal/test_scripts/push_annotations_to_emammal.py,sha256=keqru1Ktbrj6J6TBEUm3e5N0Ps_0G2X4u4YVavWvDiU,3576
 megadetector/api/batch_processing/integration/eMammal/test_scripts/select_images_for_testing.py,sha256=OYMu97p8vprSv03QcnS6aSxPBocn9sgaozfUqq_JpyM,1369
 megadetector/api/synchronous/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/api/synchronous/api_core/animal_detection_api/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/api/synchronous/api_core/animal_detection_api/api_backend.py,sha256=6fo9k1byFZdxeHzov-qNFD1ZMClXPIG-BBUlZlbHoMw,4929
-megadetector/api/synchronous/api_core/animal_detection_api/api_frontend.py,sha256=aV522pnD__xtk902JHULOrLrq0lVM7JTC5AUKNPmtBk,10417
+megadetector/api/synchronous/api_core/animal_detection_api/api_frontend.py,sha256=f16J7OBN87Tv0vVIIpXlyyVDeT6qYXDe5Kpr5XGqhdQ,10233
 megadetector/api/synchronous/api_core/animal_detection_api/config.py,sha256=05fVcLx0KK3wWFi62Mr-m_soewVn81qqeObUh-a2mrA,982
 megadetector/api/synchronous/api_core/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/api/synchronous/api_core/tests/load_test.py,sha256=bxyk3Oufl0V79vRsCPeRtWlE2o2KRtVgiqs7TSyP-iU,3277
@@ -50,32 +50,33 @@ megadetector/classification/train_classifier_tf.py,sha256=aounVoV20Iz1X5VZzKfJEa
 megadetector/classification/train_utils.py,sha256=5XnwPGtIjtDFu4xend8BH97zYhulUhF0BJHA-uYzojg,11333
 megadetector/classification/efficientnet/__init__.py,sha256=e-jfknjzCc5a0CSW-TaZ2vi0SPU1OMIsayoz2s94QAo,182
 megadetector/classification/efficientnet/model.py,sha256=qJHWV9-rYKa4E_TIee5N_OjRhqDdM-icPpoMap3Q5HM,17040
-megadetector/classification/efficientnet/utils.py,sha256=TF5S2cn2lvlCO2dFhdFPdzjbBBs-SyZGZmEx_dsJMbo,24846
+megadetector/classification/efficientnet/utils.py,sha256=dzrDrQQcvINdJFbODmrHQMUaM0RaUbct52zcSprseAg,24693
 megadetector/data_management/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-megadetector/data_management/camtrap_dp_to_coco.py,sha256=DLiGrSdndiEIUi1lF-kc-HsQVt3ouCWOQ3sthDw-Ais,8635
-megadetector/data_management/cct_json_utils.py,sha256=eCyypfQ1K21IoPDp3aYumm9WyiprNoqZAlMN8AVVKls,14795
+megadetector/data_management/camtrap_dp_to_coco.py,sha256=WC5u5nK5BwXpV26_pGy6CppQryJMgsJ9NtDbGIRQqLg,8629
+megadetector/data_management/cct_json_utils.py,sha256=LuNbxU5EAslWanC08PTKzwzCUmesGnbbJhZ1e2dCgnI,15140
 megadetector/data_management/cct_to_md.py,sha256=BvQ24XlYhgMYFcsvo6btR1k1UsiPL1vBoxegooJbxdA,5070
 megadetector/data_management/cct_to_wi.py,sha256=hnFErIlBDmhZtBv21kDW14MSdHlUjwtCGn2vnG-cN34,9771
-megadetector/data_management/coco_to_labelme.py,sha256=7HIk8N3gkGz85hffTYvzoPMw_XaCbAjvyruoMoxiFU8,8314
+megadetector/data_management/coco_to_labelme.py,sha256=Uql6f1TaMmKIZClCcqUB1bPxokdXgyAKsQm5pk5foKk,8986
 megadetector/data_management/coco_to_yolo.py,sha256=rTDOh3XdoOoo7HCSH7obT3xpQgiSykf71ba8uOXfnxc,28121
 megadetector/data_management/generate_crops_from_cct.py,sha256=Esq2Vlvp1AQvD8bmtC15OvoTZTHASBfcIVIuisxXT08,4383
 megadetector/data_management/get_image_sizes.py,sha256=2b6arj4gvoN-9f61lC3t1zAFFwYFxfb2iL83Tstoiik,6602
 megadetector/data_management/labelme_to_coco.py,sha256=8RUXALXbLpmS7UYUet4BAe9JVSDW7ojwDDpxYs072ZI,21231
 megadetector/data_management/labelme_to_yolo.py,sha256=dRePSOwU_jiCr0EakDQCz1Ct-ZHDxDglUk4HbM1LfWc,10034
-megadetector/data_management/ocr_tools.py,sha256=sdOu1hCnQrohtoKDhSdMcmQPKrTp9EpbFRfXx0Bph74,32562
-megadetector/data_management/read_exif.py,sha256=bMMzZYP8p5Ey1MglJo3fz2NeSV1l90GiTWQGxalKfNw,22765
+megadetector/data_management/ocr_tools.py,sha256=T9ClY3B-blnK3-UF1vpVdageknYsykm_6FAfqn0kliU,32529
+megadetector/data_management/read_exif.py,sha256=-q0NqJ3VZSBovD_d6de-s3UR2NuKF6gSw2etfvVuRO4,27866
 megadetector/data_management/remap_coco_categories.py,sha256=xXWv0QhTjkUfc9RKtAZanK77HMSq_21mFg_34KFD6hw,2903
 megadetector/data_management/remove_exif.py,sha256=9YwMUliszhVzkkUcotpRKA-a3h5WdQF1taQ594Bgm60,1666
+megadetector/data_management/rename_images.py,sha256=AG3YIxXEYdGmK4G-rv0_XZIylPqOZpS6gfEkydF6oDg,6918
 megadetector/data_management/resize_coco_dataset.py,sha256=AaiV7efIcNnqsXsnQckmHq2G__7ZQHBV_jN6rhZfMjo,6810
-megadetector/data_management/wi_download_csv_to_coco.py,sha256=8UJRlu1JAhKcIl-wydq54k037htCMrXBZVDHDYMZm8A,8340
-megadetector/data_management/yolo_output_to_md_output.py,sha256=cxIeEcqhPOdLGYnNcT-yYnFg-yXD5wIcYJX5TGNWeEg,17305
+megadetector/data_management/wi_download_csv_to_coco.py,sha256=ilnJZhNZK-FGUR-AfUSWjIDUk9Gytgxw7IOK_N8WKLE,8350
+megadetector/data_management/yolo_output_to_md_output.py,sha256=VZtatLoryeh2pbh1fRAJe-ao7vtoNn6ACyRbAk-2Mlg,17561
 megadetector/data_management/yolo_to_coco.py,sha256=G9XiB9D8PWaCq_kc61pKe2GkkuKwdJ7K7zsbGShb_jw,25176
 megadetector/data_management/annotations/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/data_management/annotations/annotation_constants.py,sha256=1597MpAr_HdidIHoDFj4RgUO3K5e2Xm2bGafGeonR2k,953
 megadetector/data_management/databases/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/data_management/databases/add_width_and_height_to_db.py,sha256=X7A_iniGwlkhZ0jUNm564GT_mH2_RJGLD0aGP9cBhY0,749
 megadetector/data_management/databases/combine_coco_camera_traps_files.py,sha256=oeELrMgxhsJ6aNBxPQyu4CmsdtYnzS5GKZEV8U-XUdk,6693
-megadetector/data_management/databases/integrity_check_json_db.py,sha256=RNUz6A24UwBzRIbolzXIPic3Q5LFaaCHcAJP1arap2I,16305
+megadetector/data_management/databases/integrity_check_json_db.py,sha256=A8AAlpfAbbthUH3ZOQrvRjzliMl2RS8g764Nk7Ypuqk,17109
 megadetector/data_management/databases/subset_json_db.py,sha256=JK71qSUpUZe7cJquyt2xEzirDoZq1Lrr2X0cgtHKBpA,3219
 megadetector/data_management/importers/add_nacti_sizes.py,sha256=jjGTpd36g5w7nLIeOatXRwu1Uti2GiGgP3-61QSg8oA,1156
 megadetector/data_management/importers/add_timestamps_to_icct.py,sha256=5l1TkWq3X4Mxed7zlZ07U1RQcjbzBnwcoftNiaruigM,2364
@@ -84,7 +85,7 @@ megadetector/data_management/importers/auckland_doc_test_to_json.py,sha256=tT4Xn
 megadetector/data_management/importers/auckland_doc_to_json.py,sha256=EoNsAJvzTwcgHspE05eO0LHazMVYM7-yzFBit0FiJWk,5970
 megadetector/data_management/importers/awc_to_json.py,sha256=e1HjShGS2WC-l99FV89g1u0o2v5990Vh9XsjIukg6qQ,5327
 megadetector/data_management/importers/bellevue_to_json.py,sha256=oJMSF0r_snRXtppiwFy4vvP8gErEw6_7Kv1UJs59QLo,7919
-megadetector/data_management/importers/cacophony-thermal-importer.py,sha256=YauLjRDwMaML3MpVJvon308bcO14r956iClKNwDsIDs,28640
+megadetector/data_management/importers/cacophony-thermal-importer.py,sha256=4o7gyX-uUlS3rkQZlOUGMaaUVT_pdTizcuXw4rvDrE4,28577
 megadetector/data_management/importers/carrizo_shrubfree_2018.py,sha256=ah14pfzLuDUph--qUqRqvWszOFY245rsIfAgCEF7F_I,7858
 megadetector/data_management/importers/carrizo_trail_cam_2017.py,sha256=gwpL0sM82A6UBn2qWilP15D-1lOzQchZuhxXMzZ_7Ws,8862
 megadetector/data_management/importers/cct_field_adjustments.py,sha256=wQmcntZNpHYRGjZvOcXqPxhAGdn1pDZa1pAXgTAyKmI,1348
@@ -134,40 +135,41 @@ megadetector/data_management/lila/get_lila_image_counts.py,sha256=UxXS5RDnSA_Wbx
 megadetector/data_management/lila/lila_common.py,sha256=IEnGoyRgcqbek1qJ1gFE83p1Pg_5kaMS-nQI25lRWIs,10132
 megadetector/data_management/lila/test_lila_metadata_urls.py,sha256=2zKNjgqC3kxdFfyvQC3KTlpc9lf2iMzecHQBf--r_Tk,4438
 megadetector/detection/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-megadetector/detection/process_video.py,sha256=Fufvtmmuf6huWdwet1d035BJHq2Sq7muIgLNVGS8Y0Y,29912
-megadetector/detection/pytorch_detector.py,sha256=-sI1Bm4acNLDi63RaiPpuEM8_RDwDQ2LWHBVTtkr2RM,12727
-megadetector/detection/run_detector.py,sha256=CxwCqE-T5ioQ1kb5Tn4HvzBMK0gvJwaAOl8HfDTWiVY,29745
-megadetector/detection/run_detector_batch.py,sha256=MQ8cEVg92aTmysapPuj3JAr92HfnuopCHbDGoMZA7ko,52132
-megadetector/detection/run_inference_with_yolov5_val.py,sha256=e0LRZ8J1VI3G3eVL6_y19i2j77ZUsLl-mf3i7oLde7U,36946
+megadetector/detection/process_video.py,sha256=wNjv2LciLSzIu_wkMQMrSf9gOyv0NC-Busq-yYORG_0,42686
+megadetector/detection/pytorch_detector.py,sha256=p70kAX5pqU4SO4GjYJmzbTPV4tKUp5WRapOs7vgSKes,13885
+megadetector/detection/run_detector.py,sha256=biXbeS8aNDlidilxjzhZ-p4_wr2ID-rpsRklbNEd7ME,30094
+megadetector/detection/run_detector_batch.py,sha256=V8gfcWNHu7r0Nj7seQVeFpB5ylkkhZK1gFwHuoiB4L4,56894
+megadetector/detection/run_inference_with_yolov5_val.py,sha256=u9i1ndwl_k0DsiAWYQcYrrrB9D9Wt56_k6iGTAetUaM,46786
 megadetector/detection/run_tiled_inference.py,sha256=vw0713eNuMiEOjHfweQl58zPHNxPOMdFWZ8bTDLhlMY,37883
-megadetector/detection/tf_detector.py,sha256=5tdGXgF7bkeDJaXe4U34HD5z97xVzDpmYWqNK2AVf1o,7562
-megadetector/detection/video_utils.py,sha256=vdetbPCHKccJZNt4sREVcHil6WyMgU3QXNWe4mgSJLg,22773
+megadetector/detection/tf_detector.py,sha256=-vcBuYRRLKumUj6imcDYgCgClGji0a21uMjoUAtY3yw,8104
+megadetector/detection/video_utils.py,sha256=e6XidwChyqkN5ga7yLbujMqKwXITvQGVWEw0qyAhSoA,32398
 megadetector/detection/detector_training/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/detection/detector_training/model_main_tf2.py,sha256=YwNsZ7hkIFaEuwKU0rHG_VyqiR_0E01BbdlD0Yx4Smo,4936
 megadetector/postprocessing/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/postprocessing/add_max_conf.py,sha256=qTE1_0RwGAy6jLDkHrIo2pS84yNbUV11s4IZuAYGdIU,1514
-megadetector/postprocessing/categorize_detections_by_size.py,sha256=RFTQrVM8FhIcwevBFKOiBv2epY4GzWHf-kIXyhyAUX8,5688
+megadetector/postprocessing/categorize_detections_by_size.py,sha256=YdapcvjA6Dz2dPa2AFf1Dwyl7C-OmmP4G4OjhTOuaF4,5797
+megadetector/postprocessing/classification_postprocessing.py,sha256=8uvlA0Gc8nakM5IE5Pud7WZfmF5kEhcYvxgQXcI9kl0,30429
 megadetector/postprocessing/combine_api_outputs.py,sha256=xCJHEKca8YW-mupEr0yNNwwSBeL9NvcV1w3VtEzN4lk,8535
-megadetector/postprocessing/compare_batch_results.py,sha256=qLEqVpqaGa6tbEfToEZNyATaqXMvgBc7bLwgykAGpz4,38261
-megadetector/postprocessing/convert_output_format.py,sha256=IGCWoIJ1Z9RUI9yqpbL3t5KThDiElM3czmiTyXty72c,15002
+megadetector/postprocessing/compare_batch_results.py,sha256=7O5c6-JsIDpuIGobks_R9j8MPuiZQRnEtNnJQsJqICM,38918
+megadetector/postprocessing/convert_output_format.py,sha256=HwThfK76UPEAGa3KQbJ_tMKIrUvJ3JhKoQVWJt9dPBk,15447
 megadetector/postprocessing/load_api_results.py,sha256=FqcaiPMuqTojZOV3Jn14pJESpuwjWGbZtcvJuVXUaDM,6861
 megadetector/postprocessing/md_to_coco.py,sha256=t8zHN3QmwxuvcQKxLd_yMSjwncxy7YEoq2EGr0kwBDs,11049
 megadetector/postprocessing/md_to_labelme.py,sha256=hejMKVxaz_xdtsGDPTQkeWuis7gzT-VOrL2Qf8ym1x0,11703
-megadetector/postprocessing/merge_detections.py,sha256=cpAeyWJjC6_Mf0wv9Qxo_zxp_xfgmrMIfeEhCEBKVe4,17173
-megadetector/postprocessing/postprocess_batch_results.py,sha256=fl3a7Mc4l0OgRA5BLT_GgaC9WuDcoyf3hNW9fXIZeI4,77376
+megadetector/postprocessing/merge_detections.py,sha256=AEMgMivhph1vph_t_Qv85d9iHynT2nvq7otN4KGrDLU,17776
+megadetector/postprocessing/postprocess_batch_results.py,sha256=ucFW2WsuoxIgEC62CrgOLCOTO3LxIZ-LPCYRJ9xjais,78178
 megadetector/postprocessing/remap_detection_categories.py,sha256=d9IYTa0i_KbbrarJc_mczABmdwypscl5-KpK8Hx_z8o,6640
 megadetector/postprocessing/render_detection_confusion_matrix.py,sha256=_wsk4W0PbNiqmFuHy-EA0Z07B1tQLMsdCTPatnHAdZw,27382
 megadetector/postprocessing/separate_detections_into_folders.py,sha256=k42gxnL8hbBiV0e2T-jmFrhxzIxnhi57Nx9cDSSL5s0,31218
-megadetector/postprocessing/subset_json_detector_output.py,sha256=64nEOilaB0_B8o-unh7PCjyUkfDPQDcl2QGOuzkw5OI,26424
+megadetector/postprocessing/subset_json_detector_output.py,sha256=TIXIWEv0nh4cXvhMLcM_ZryM5ly1NOTkWopM2RjEpqQ,26822
 megadetector/postprocessing/top_folders_to_bottom.py,sha256=Dqk-KZXiRlIYlmLZmk6aUapmaaLJUKOf8wK1kxt9W6A,6283
 megadetector/postprocessing/repeat_detection_elimination/find_repeat_detections.py,sha256=e4Y9CyMyd-bLN3il8tu76vI0nVYHZlhZr6vcL0J4zQ0,9832
 megadetector/postprocessing/repeat_detection_elimination/remove_repeat_detections.py,sha256=tARPxuY0OyQgpKU2XqiQPko3f-hHnWuISB8ZlZgXwxI,2819
-megadetector/postprocessing/repeat_detection_elimination/repeat_detections_core.py,sha256=qj9gcvXu_xdpvzIuPVyHfGegOO5R0bdYtXlI9gKrFcM,66513
+megadetector/postprocessing/repeat_detection_elimination/repeat_detections_core.py,sha256=_RX0Gtb8YQPYdfQDGIvg1RvyqsdyanmEg1pqVmheHlg,67776
 megadetector/taxonomy_mapping/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/taxonomy_mapping/map_lila_taxonomy_to_wi_taxonomy.py,sha256=6D_YHTeWTs6O8S9ABog2t9-wfQSh9dW2k9XTqXUZKfo,17927
 megadetector/taxonomy_mapping/map_new_lila_datasets.py,sha256=M-hRnQuqh5QhW-7LmTvYRex1Y2izQFSgEzb92gqqx1M,4062
 megadetector/taxonomy_mapping/prepare_lila_taxonomy_release.py,sha256=N9TUgg3_2u4hc5OBRydvEpweC3RIJ9ry5bXoi1BXLAY,4676
-megadetector/taxonomy_mapping/preview_lila_taxonomy.py,sha256=eYl7tjvSlEH7F7UsRm8YlljQAdITEQvjQb-1NyYbQK8,19583
+megadetector/taxonomy_mapping/preview_lila_taxonomy.py,sha256=3e-e3rurissksHgRCrc-_oLJSy2KCxcvwtAQM7L2E1U,19549
 megadetector/taxonomy_mapping/retrieve_sample_image.py,sha256=4cfWsLRwS_EwAmQr2p5tA_W6glBK71tSjPfaHxUZQWs,1979
 megadetector/taxonomy_mapping/simple_image_download.py,sha256=_1dEGn4356mdQAy9yzkH5DntPO7-nQyYo2zm08ODpJc,6852
 megadetector/taxonomy_mapping/species_lookup.py,sha256=B5arfF1OVICtTokVOtJcN8W2SxGmq46AO0SfA11Upt8,28291
@@ -176,11 +178,11 @@ megadetector/taxonomy_mapping/taxonomy_graph.py,sha256=ayrTFseVaIMbtMXhnjWCkZdxI
 megadetector/taxonomy_mapping/validate_lila_category_mappings.py,sha256=1qyZr23bvZSVUYLQnO1XAtIZ4jdpARA5dxt8euKVyOA,2527
 megadetector/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/utils/azure_utils.py,sha256=0BdnkG2hW-X0yFpsJqmBhOd2wysz_LvhuyImPJMVPJs,6271
-megadetector/utils/ct_utils.py,sha256=mppmjTtRNGgnp0IBoXUPy5uNAanxpgPteVW5ACUi3vg,17847
+megadetector/utils/ct_utils.py,sha256=RTMc0UszYuW9QpMo-qetaWder1mFWIzkMLL2UM6PYdY,17960
 megadetector/utils/directory_listing.py,sha256=r4rg2xA4O9ZVxVtzPZzXIXa0DOEukAJMTTNcNSiQcuM,9668
-megadetector/utils/md_tests.py,sha256=FTNB-_5_gICkvbQZ9_m5aPoHc-5PeWokkKvFJ47qTcM,36018
-megadetector/utils/path_utils.py,sha256=kVkz70tZM2RpNpuquqFCydL6ca5n3Grwh0Un2lHpXCA,35948
-megadetector/utils/process_utils.py,sha256=uNzbijLk4lRqj2uU9zlUN8VuDeM4J7aLR2eb2O2-9ys,5226
+megadetector/utils/md_tests.py,sha256=W8Ua4eh8Z1QHBUlhKoBTt-2a9XOEhVv2TgLu065_PlI,46842
+megadetector/utils/path_utils.py,sha256=Uj_aNvA_P0buq-3ebQLZz-6to8mNO5JyBhD7n1-pUoU,37149
+megadetector/utils/process_utils.py,sha256=2SdFVxqob-YUW2BTjUEavNuRH3jA4V05fbKMtrVSd3c,5635
 megadetector/utils/sas_blob_utils.py,sha256=k76EcMmJc_otrEHcfV2fxAC6fNhxU88FxM3ddSYrsKU,16917
 megadetector/utils/split_locations_into_train_val.py,sha256=jvaDu1xKB51L3Xq2nXQo0XtXRjNRf8RglBApl1g6gHo,10101
 megadetector/utils/string_utils.py,sha256=ZQapJodzvTDyQhjZgMoMl3-9bqnKAUlORpws8Db9AkA,2050
@@ -189,11 +191,11 @@ megadetector/utils/write_html_image_list.py,sha256=apzoWkgZWG-ybCT4k92PlS4-guN_s
 megadetector/visualization/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/visualization/plot_utils.py,sha256=lOfU3uPrcuHZagV_1SN8erT8PujIepocgw6KZ17Ej6c,10671
 megadetector/visualization/render_images_with_thumbnails.py,sha256=kgJYW8BsqRO4C7T3sqItdBuSkZ64I1vOtIWAsVG4XBI,10589
-megadetector/visualization/visualization_utils.py,sha256=BIb1uCDD6TlHLDM_2uA-4lzcVcdiFLeKu8kuY2fct6g,62150
-megadetector/visualization/visualize_db.py,sha256=l7U4emtNdLGTWU5gB7i7O9yOmvLDBCeZMOAGeKu36rk,20798
-megadetector/visualization/visualize_detector_output.py,sha256=dFpQdLnbULO8wPGeN2z0muYNtHglUDsH-LeqdbYa6DY,17096
-megadetector-5.0.12.dist-info/LICENSE,sha256=RMa3qq-7Cyk7DdtqRj_bP1oInGFgjyHn9-PZ3PcrqIs,1100
-megadetector-5.0.12.dist-info/METADATA,sha256=Hc-G5FqXVt5T1zxOx6qR5E4qpbinZvxBXVKnEqxkkeU,7892
-megadetector-5.0.12.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
-megadetector-5.0.12.dist-info/top_level.txt,sha256=wf9DXa8EwiOSZ4G5IPjakSxBPxTDjhYYnqWRfR-zS4M,13
-megadetector-5.0.12.dist-info/RECORD,,
+megadetector/visualization/visualization_utils.py,sha256=jWiXlLpmWh_CH2vApZURclOC7fdip1aKWQ66wuNabyA,62369
+megadetector/visualization/visualize_db.py,sha256=3FhOtn3GHvNsomwSpsSEzYe58lF9B4Ob3MEi_xplrdo,21256
+megadetector/visualization/visualize_detector_output.py,sha256=LY8QgDWpWlXVLZJUskvT29CdkNvIlEsFTk4DC_lS6pk,17052
+megadetector-5.0.14.dist-info/LICENSE,sha256=RMa3qq-7Cyk7DdtqRj_bP1oInGFgjyHn9-PZ3PcrqIs,1100
+megadetector-5.0.14.dist-info/METADATA,sha256=yeX8szvUXU887ERsfi8lV8lSYEa4fBPM21KXbjNJOOI,7893
+megadetector-5.0.14.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
+megadetector-5.0.14.dist-info/top_level.txt,sha256=wf9DXa8EwiOSZ4G5IPjakSxBPxTDjhYYnqWRfR-zS4M,13
+megadetector-5.0.14.dist-info/RECORD,,