megadetector 10.0.6__py3-none-any.whl → 10.0.8__py3-none-any.whl

megadetector/utils/wi_taxonomy_utils.py

@@ -10,8 +10,6 @@ Functions related to working with the SpeciesNet / Wildlife Insights taxonomy.
 
 import os
 import json
-import tempfile
-import uuid
 
 import pandas as pd
 
@@ -180,8 +178,10 @@ def taxonomy_level_index(s):
     if len(tokens) == 7:
         tokens = tokens[1:-1]
 
+    # Anything without a class is considered non-taxonomic
     if len(tokens[0]) == 0:
         return 0
+
     # WI taxonomy strings start at class, so we'll never return 1 (kingdom) or 2 (phylum)
     elif len(tokens[1]) == 0:
         return 3
@@ -198,6 +198,22 @@ def taxonomy_level_index(s):
         return 8
 
 
+def is_taxonomic_prediction_string(s):
+    """
+    Determines whether [s] is a classification string that has taxonomic properties; this
+    does not include, e.g., blanks/vehicles/no cv result.  It also excludes "animal".
+
+    Args:
+        s (str): a five- or seven-token taxonomic string
+
+    Returns:
+        bool: whether [s] is a taxonomic category
+    """
+
+    return (taxonomy_level_index(s) > 0)
+
+
+
 def get_kingdom(prediction_string):
     """
     Return the kingdom field from a WI prediction string
@@ -381,11 +397,12 @@ def generate_whole_image_detections_for_classifications(classifications_json_fil
 
 
 def generate_md_results_from_predictions_json(predictions_json_file,
-                                              md_results_file,
+                                              md_results_file=None,
                                               base_folder=None,
                                               max_decimals=5,
                                               convert_human_to_person=True,
-                                              convert_homo_species_to_human=True):
+                                              convert_homo_species_to_human=True,
+                                              verbose=False):
     """
     Generate an MD-formatted .json file from a predictions.json file, generated by the
     SpeciesNet ensemble.  Typically, MD results files use relative paths, and predictions.json
@@ -406,7 +423,7 @@ def generate_md_results_from_predictions_json(predictions_json_file,
 
     Args:
         predictions_json_file (str): path to a predictions.json file, or a dict
-        md_results_file (str): path to which we should write an MD-formatted .json file
+        md_results_file (str, optional): path to which we should write an MD-formatted .json file
         base_folder (str, optional): leading string to remove from each path in the
             predictions.json file
         max_decimals (int, optional): number of decimal places to which we should round
@@ -417,6 +434,10 @@ def generate_md_results_from_predictions_json(predictions_json_file,
         convert_homo_species_to_human (bool, optional): the ensemble often rolls human predictions
             up to "homo species", which isn't wrong, but looks odd.  This forces these back to
             "homo sapiens".
+        verbose (bool, optional): enable additional debug output
+
+    Returns:
+        dict: results in MD format
     """
 
     # Read predictions file
@@ -540,7 +561,9 @@ def generate_md_results_from_predictions_json(predictions_json_file,
                     # but a non-blank prediction.  For now, create a fake detection to handle this prediction.
                     if len(im_out['detections']) == 0:
 
-                        print('Warning: creating fake detection for non-blank whole-image classification')
+                        if verbose:
+                            print('Warning: creating fake detection for non-blank whole-image classification' + \
+                                  ' in {}'.format(im_in['file']))
                         det_out = {}
                         all_unknown_detections.append(det_out)
 
@@ -622,12 +645,15 @@ def generate_md_results_from_predictions_json(predictions_json_file,
     output_dict['classification_category_descriptions'] = classification_category_descriptions
     output_dict['images'] = images_out
 
-    with open(md_results_file,'w') as f:
-        json.dump(output_dict,f,indent=1)
+    if md_results_file is not None:
+        with open(md_results_file,'w') as f:
+            json.dump(output_dict,f,indent=1)
 
-    validation_options = ValidateBatchResultsOptions()
-    validation_options.raise_errors = True
-    _ = validate_batch_results(md_results_file, options=validation_options)
+        validation_options = ValidateBatchResultsOptions()
+        validation_options.raise_errors = True
+        _ = validate_batch_results(md_results_file, options=validation_options)
+
+    return output_dict
 
 # ...def generate_md_results_from_predictions_json(...)
 
@@ -867,24 +893,16 @@ def load_md_or_speciesnet_file(fn,verbose=True):
     with open(fn,'r') as f:
         detector_output = json.load(f)
 
-    # Convert to MD format if necessary
+    # If this is a SpeicesNet file, convert to MD format
     if 'predictions' in detector_output:
+
         if verbose:
             print('This appears to be a SpeciesNet output file, converting to MD format')
-        md_temp_dir = os.path.join(tempfile.gettempdir(), 'megadetector_temp_files')
-        os.makedirs(md_temp_dir,exist_ok=True)
-        temp_results_file = os.path.join(md_temp_dir,str(uuid.uuid1()) + '.json')
-        print('Writing temporary results to {}'.format(temp_results_file))
-        generate_md_results_from_predictions_json(predictions_json_file=fn,
-                                                  md_results_file=temp_results_file,
-                                                  base_folder=None)
-        with open(temp_results_file,'r') as f:
-            detector_output = json.load(f)
-        try:
-            os.remove(temp_results_file)
-        except Exception:
-            if verbose:
-                print('Warning: error removing temporary .json {}'.format(temp_results_file))
+        detector_output = generate_md_results_from_predictions_json(predictions_json_file=fn,
+                                                                    md_results_file=None,
+                                                                    base_folder=None)
+
+    # ...if this is a SpeciesNet file
 
     assert 'images' in detector_output, \
         'Detector output file should be a json file with an "images" field.'

megadetector/visualization/visualize_video_output.py

@@ -67,6 +67,10 @@ class VideoVisualizationOptions:
         #: Skip frames before first and after last above-threshold detection
         self.trim_to_detections = False
 
+        #: By default, output videos use the same extension as input videos,
+        #: use this to force a particular extension
+        self.output_extension = None
+
 # ...class VideoVisualizationOptions
 
 
@@ -287,10 +291,16 @@ def _process_video(video_entry,
         result['error'] = 'Video not found: {}'.format(input_video_path)
         return result
 
-    # Create output path preserving directory structure
-    rel_path = video_entry['file']
-    output_video_path = os.path.join(out_dir, rel_path)
-    os.makedirs(os.path.dirname(output_video_path), exist_ok=True)
+    output_fn_relative = video_entry['file']
+
+    if options.output_extension is not None:
+        ext = options.output_extension
+        if not ext.startswith('.'):
+            ext = '.' + ext
+        output_fn_relative = os.path.splitext(output_fn_relative)[0] + ext
+
+    output_fn_abs = os.path.join(out_dir, output_fn_relative)
+    os.makedirs(os.path.dirname(output_fn_abs), exist_ok=True)
 
     # Get frames to process
     frames_to_process = _get_frames_to_process(video_entry,
@@ -392,10 +402,10 @@ def _process_video(video_entry,
 
             # Create VideoWriter
             fourcc = cv2.VideoWriter_fourcc(*options.fourcc)
-            video_writer = cv2.VideoWriter(output_video_path, fourcc, output_framerate, (width, height))
+            video_writer = cv2.VideoWriter(output_fn_abs, fourcc, output_framerate, (width, height))
 
             if not video_writer.isOpened():
-                result['error'] = 'Failed to open video writer for {}'.format(output_video_path)
+                result['error'] = 'Failed to open video writer for {}'.format(output_fn_abs)
                 return result
 
             # Write frames

{megadetector-10.0.6.dist-info → megadetector-10.0.8.dist-info}/METADATA

@@ -1,134 +1,134 @@
-Metadata-Version: 2.4
-Name: megadetector
-Version: 10.0.6
-Summary: MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.
-Author-email: Your friendly neighborhood MegaDetector team <cameratraps@lila.science>
-Maintainer-email: Your friendly neighborhood MegaDetector team <cameratraps@lila.science>
-License:     MIT License
-        
-            Permission is hereby granted, free of charge, to any person obtaining a copy
-            of this software and associated documentation files (the "Software"), to deal
-            in the Software without restriction, including without limitation the rights
-            to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-            copies of the Software, and to permit persons to whom the Software is
-            furnished to do so, subject to the following conditions:
-        
-            The above copyright notice and this permission notice shall be included in all
-            copies or substantial portions of the Software.
-        
-            THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-            IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-            FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-            AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-            LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-            OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
-            SOFTWARE.
-        
-Project-URL: Homepage, https://github.com/agentmorris/MegaDetector
-Project-URL: Documentation, https://megadetector.readthedocs.io
-Project-URL: Bug Reports, https://github.com/agentmorris/MegaDetector/issues
-Project-URL: Source, https://github.com/agentmorris/MegaDetector
-Keywords: camera traps,conservation,wildlife,ai,megadetector
-Classifier: Programming Language :: Python :: 3
-Requires-Python: <3.14,>=3.9
-Description-Content-Type: text/markdown
-License-File: LICENSE
-Requires-Dist: mkl==2024.0; sys_platform != "darwin"
-Requires-Dist: numpy>=1.26.4
-Requires-Dist: Pillow>=9.5
-Requires-Dist: tqdm>=4.64.0
-Requires-Dist: jsonpickle>=3.0.2
-Requires-Dist: humanfriendly>=2.1
-Requires-Dist: matplotlib>=3.8.0
-Requires-Dist: opencv-python>=4.8.0
-Requires-Dist: requests>=2.31.0
-Requires-Dist: pyqtree>=1.0.0
-Requires-Dist: scikit-learn>=1.3.1
-Requires-Dist: pandas>=2.1.1
-Requires-Dist: python-dateutil
-Requires-Dist: send2trash
-Requires-Dist: clipboard
-Requires-Dist: dill
-Requires-Dist: ruff
-Requires-Dist: pytest
-Requires-Dist: ultralytics-yolov5==0.1.1
-Requires-Dist: yolov9pip==0.0.4
-Dynamic: license-file
-
-# MegaDetector
-
-This package is a pip-installable version of the support/inference code for [MegaDetector](https://github.com/agentmorris/MegaDetector/?tab=readme-ov-file#megadetector), an object detection model that helps conservation biologists spend less time doing boring things with camera trap images.  Complete documentation for this Python package is available at [megadetector.readthedocs.io](https://megadetector.readthedocs.io).
-
-If you aren't looking for the Python package specifically, and you just want to learn more about what MegaDetector is all about, head over to the [MegaDetector repo](https://github.com/agentmorris/MegaDetector/?tab=readme-ov-file#megadetector).
-
-If you don't want to run MegaDetector, and you just want to use the utilities in this package - postprocessing, manipulating large volumes of camera trap images, etc. - you may want to check out the [megadetector-utils](https://pypi.org/project/megadetector-utils/) package, which is identical to this one, but excludes all of the PyTorch/YOLO dependencies, and is thus approximately one zillion times smaller.
-
-## Installation
-
-Install with:
-
-`pip install megadetector`
-
-MegaDetector model weights aren't downloaded at the time you install the package, but they will be (optionally) automatically downloaded the first time you run the model.
-
-## Package reference
-
-See [megadetector.readthedocs.io](https://megadetector.readthedocs.io).
-
-
-## Examples of things you can do with this package
-
-### Run MegaDetector on one image and count the number of detections
-
-```
-from megadetector.utils import url_utils
-from megadetector.visualization import visualization_utils as vis_utils
-from megadetector.detection import run_detector
-
-# This is the image at the bottom of this page, it has one animal in it
-image_url = 'https://github.com/agentmorris/MegaDetector/raw/main/images/orinoquia-thumb-web.jpg'
-temporary_filename = url_utils.download_url(image_url)
-
-image = vis_utils.load_image(temporary_filename)
-
-# This will automatically download MDv5a; you can also specify a filename.
-model = run_detector.load_detector('MDV5A')
-
-result = model.generate_detections_one_image(image)
-
-detections_above_threshold = [d for d in result['detections'] if d['conf'] > 0.2]
-print('Found {} detections above threshold'.format(len(detections_above_threshold)))
-```
-
-### Run MegaDetector on a folder of images
-
-```
-from megadetector.detection.run_detector_batch import \
-    load_and_run_detector_batch, write_results_to_file
-from megadetector.utils import path_utils
-import os
-
-# Pick a folder to run MD on recursively, and an output file
-image_folder = os.path.expanduser('~/megadetector_test_images')
-output_file = os.path.expanduser('~/megadetector_output_test.json')
-
-# Recursively find images
-image_file_names = path_utils.find_images(image_folder,recursive=True)
-
-# This will automatically download MDv5a; you can also specify a filename.
-results = load_and_run_detector_batch('MDV5A', image_file_names)
-
-# Write results to a format that Timelapse and other downstream tools like.
-write_results_to_file(results,
-                      output_file,
-                      relative_path_base=image_folder,
-                      detector_file=detector_filename)
-```
-
-## Contact
-
-Contact <a href="cameratraps@lila.science">cameratraps@lila.science</a> with questions.
-
-## Gratuitous animal picture
-
-<img src="https://github.com/agentmorris/MegaDetector/raw/main/images/orinoquia-thumb-web_detections.jpg"><br/>Image credit University of Minnesota, from the [Orinoquía Camera Traps](http://lila.science/datasets/orinoquia-camera-traps/) data set.
+Metadata-Version: 2.4
+Name: megadetector
+Version: 10.0.8
+Summary: MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.
+Author-email: Your friendly neighborhood MegaDetector team <cameratraps@lila.science>
+Maintainer-email: Your friendly neighborhood MegaDetector team <cameratraps@lila.science>
+License:     MIT License
+        
+            Permission is hereby granted, free of charge, to any person obtaining a copy
+            of this software and associated documentation files (the "Software"), to deal
+            in the Software without restriction, including without limitation the rights
+            to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+            copies of the Software, and to permit persons to whom the Software is
+            furnished to do so, subject to the following conditions:
+        
+            The above copyright notice and this permission notice shall be included in all
+            copies or substantial portions of the Software.
+        
+            THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+            IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+            FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+            AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+            LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+            OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+            SOFTWARE.
+        
+Project-URL: Homepage, https://github.com/agentmorris/MegaDetector
+Project-URL: Documentation, https://megadetector.readthedocs.io
+Project-URL: Bug Reports, https://github.com/agentmorris/MegaDetector/issues
+Project-URL: Source, https://github.com/agentmorris/MegaDetector
+Keywords: camera traps,conservation,wildlife,ai,megadetector
+Classifier: Programming Language :: Python :: 3
+Requires-Python: <3.14,>=3.9
+Description-Content-Type: text/markdown
+License-File: LICENSE
+Requires-Dist: mkl==2024.0; sys_platform != "darwin"
+Requires-Dist: numpy>=1.26.4
+Requires-Dist: Pillow>=9.5
+Requires-Dist: tqdm>=4.64.0
+Requires-Dist: jsonpickle>=3.0.2
+Requires-Dist: humanfriendly>=2.1
+Requires-Dist: matplotlib>=3.8.0
+Requires-Dist: opencv-python>=4.8.0
+Requires-Dist: requests>=2.31.0
+Requires-Dist: pyqtree>=1.0.0
+Requires-Dist: scikit-learn>=1.3.1
+Requires-Dist: pandas>=2.1.1
+Requires-Dist: python-dateutil
+Requires-Dist: send2trash
+Requires-Dist: clipboard
+Requires-Dist: dill
+Requires-Dist: ruff
+Requires-Dist: pytest
+Requires-Dist: ultralytics-yolov5==0.1.1
+Requires-Dist: yolov9pip==0.0.4
+Dynamic: license-file
+
+# MegaDetector
+
+This package is a pip-installable version of the support/inference code for [MegaDetector](https://github.com/agentmorris/MegaDetector/?tab=readme-ov-file#megadetector), an object detection model that helps conservation biologists spend less time doing boring things with camera trap images.  Complete documentation for this Python package is available at [megadetector.readthedocs.io](https://megadetector.readthedocs.io).
+
+If you aren't looking for the Python package specifically, and you just want to learn more about what MegaDetector is all about, head over to the [MegaDetector repo](https://github.com/agentmorris/MegaDetector/?tab=readme-ov-file#megadetector).
+
+If you don't want to run MegaDetector, and you just want to use the utilities in this package - postprocessing, manipulating large volumes of camera trap images, etc. - you may want to check out the [megadetector-utils](https://pypi.org/project/megadetector-utils/) package, which is identical to this one, but excludes all of the PyTorch/YOLO dependencies, and is thus approximately one zillion times smaller.
+
+## Installation
+
+Install with:
+
+`pip install megadetector`
+
+MegaDetector model weights aren't downloaded at the time you install the package, but they will be (optionally) automatically downloaded the first time you run the model.
+
+## Package reference
+
+See [megadetector.readthedocs.io](https://megadetector.readthedocs.io).
+
+
+## Examples of things you can do with this package
+
+### Run MegaDetector on one image and count the number of detections
+
+```
+from megadetector.utils import url_utils
+from megadetector.visualization import visualization_utils as vis_utils
+from megadetector.detection import run_detector
+
+# This is the image at the bottom of this page, it has one animal in it
+image_url = 'https://github.com/agentmorris/MegaDetector/raw/main/images/orinoquia-thumb-web.jpg'
+temporary_filename = url_utils.download_url(image_url)
+
+image = vis_utils.load_image(temporary_filename)
+
+# This will automatically download MDv5a; you can also specify a filename.
+model = run_detector.load_detector('MDV5A')
+
+result = model.generate_detections_one_image(image)
+
+detections_above_threshold = [d for d in result['detections'] if d['conf'] > 0.2]
+print('Found {} detections above threshold'.format(len(detections_above_threshold)))
+```
+
+### Run MegaDetector on a folder of images
+
+```
+from megadetector.detection.run_detector_batch import \
+    load_and_run_detector_batch, write_results_to_file
+from megadetector.utils import path_utils
+import os
+
+# Pick a folder to run MD on recursively, and an output file
+image_folder = os.path.expanduser('~/megadetector_test_images')
+output_file = os.path.expanduser('~/megadetector_output_test.json')
+
+# Recursively find images
+image_file_names = path_utils.find_images(image_folder,recursive=True)
+
+# This will automatically download MDv5a; you can also specify a filename.
+results = load_and_run_detector_batch('MDV5A', image_file_names)
+
+# Write results to a format that Timelapse and other downstream tools like.
+write_results_to_file(results,
+                      output_file,
+                      relative_path_base=image_folder,
+                      detector_file=detector_filename)
+```
+
+## Contact
+
+Contact <a href="cameratraps@lila.science">cameratraps@lila.science</a> with questions.
+
+## Gratuitous animal picture
+
+<img src="https://github.com/agentmorris/MegaDetector/raw/main/images/orinoquia-thumb-web_detections.jpg"><br/>Image credit University of Minnesota, from the [Orinoquía Camera Traps](http://lila.science/datasets/orinoquia-camera-traps/) data set.

{megadetector-10.0.6.dist-info → megadetector-10.0.8.dist-info}/RECORD

@@ -32,7 +32,7 @@ megadetector/classification/efficientnet/utils.py,sha256=76SQdh0zK7CFcwTW4kiechC
 megadetector/data_management/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/data_management/animl_to_md.py,sha256=Z6PDJxeM_5dMZJBM3j0mxDPW2_1bNkXx0M3_qq42_Ig,4416
 megadetector/data_management/camtrap_dp_to_coco.py,sha256=HoCGMzZTEvnudnAjbOr-mCizXHmc8mMNSUChy_Q9PkI,9673
-megadetector/data_management/cct_json_utils.py,sha256=B9YawIxs1l62AsWlv0yHaV01XZtbRXQ8NByRwfYGjv0,19536
+megadetector/data_management/cct_json_utils.py,sha256=Azyuwok6-g5YGVAdBzv3-eJIlplXCoTcjGWu6zy9bQ0,19917
 megadetector/data_management/cct_to_md.py,sha256=e1fYevSz0m65n5H16uB6uwzNiXiwxjdB2ka5p68R4d0,5120
 megadetector/data_management/cct_to_wi.py,sha256=wcBOmurXY5I-hiqV6SmRSGUAeYaKHEU1LgCZjqVmCyw,9561
 megadetector/data_management/coco_to_labelme.py,sha256=uYJ60XoZfHUEfLzj-EjLyeNM590skNnMp-IThWwNISo,8683
@@ -59,7 +59,7 @@ megadetector/data_management/databases/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JC
 megadetector/data_management/databases/add_width_and_height_to_db.py,sha256=EYfFGPkXyFz6ZGQfXjCK3pNXLBg0hu73wiACdEEB0E0,2964
 megadetector/data_management/databases/combine_coco_camera_traps_files.py,sha256=Au7akR2KZHm_l8-MGGRGf0CQy1az_JVgZW5Yz1_XQeQ,6609
 megadetector/data_management/databases/integrity_check_json_db.py,sha256=kxGCHpBADXT_LHVLUENGvmby-orvVYIsK6fdgqhABBI,17386
-megadetector/data_management/databases/subset_json_db.py,sha256=mO1eAkrfCSAp2_r5vHVjHvet_utFJcWRm3rNa8WvSx8,4134
+megadetector/data_management/databases/subset_json_db.py,sha256=AQF-12vnZJ73JrWvjUd2ME666MmQDiCOvO0e7zGjPpg,6243
 megadetector/data_management/lila/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/data_management/lila/create_lila_blank_set.py,sha256=tApCL4XN1Vzl6YvcdI6SY4TZbHeCyHLzNYweFfX0sy0,19490
 megadetector/data_management/lila/create_lila_test_set.py,sha256=UWJPKrwNW-UVeGrMUrFvmIt2UHVyuFiPzRFKkbEbk5A,5014
@@ -73,21 +73,21 @@ megadetector/data_management/lila/test_lila_metadata_urls.py,sha256=ThU78Ks5V3rF
 megadetector/detection/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/detection/change_detection.py,sha256=Ne3GajbH_0KPBU8ruHp4Rkr0uKd5oKAMQ3CQTRKRHgQ,28659
 megadetector/detection/process_video.py,sha256=kuQHrpOC3LQo9ecqJPpzkds9fZVnoLmrfJw_yh-oxi8,17890
-megadetector/detection/pytorch_detector.py,sha256=ixU-2_AnCwEP33FaaqTZRoi1WxIUeM4x_ksbNT-tezA,59817
+megadetector/detection/pytorch_detector.py,sha256=4Ix6AOBciMbn5zFHXe4hgb5tXGOup57ju3z8gtsin3s,60567
 megadetector/detection/run_detector.py,sha256=TTX29zxDN_O7ja61sOmMIVewUz3yRvKg1D1AAYhVEkc,46851
 megadetector/detection/run_detector_batch.py,sha256=aZgiywL6arrdQ_l3jzlHctlccqL537lwVStjhi1hIWw,89823
-megadetector/detection/run_inference_with_yolov5_val.py,sha256=A-AQuARVVy7oR9WtenCZwzvd5U3HQwihMr4Jkiv9U0g,53515
+megadetector/detection/run_inference_with_yolov5_val.py,sha256=dJXh3BwKOQQ4OA-Mq_heEb7AfBAk7qKUAagnIGuFtaU,53689
 megadetector/detection/run_md_and_speciesnet.py,sha256=Dp_SpJZp0pX9jzFtxM6zPCyBNq49uyQpMDAdNDLVorM,50280
-megadetector/detection/run_tiled_inference.py,sha256=wrQkKIloHBO9v2i0nZ1_Tt75iFtVrnco3Y4FafoVxdw,39382
+megadetector/detection/run_tiled_inference.py,sha256=hVpR-URC67e6Ht-cy_EgIrJ4GFina29H_lBXOE3bzwM,39435
 megadetector/detection/tf_detector.py,sha256=3b2MiqgMw8KBDzHQliUSDXWrmKpa9iZnfe6EgYpMcYo,8398
-megadetector/detection/video_utils.py,sha256=AlmNJ5n7qmv3Z65HcjI1ALAxXMmyTG3pUiO7oJm-8rs,53363
+megadetector/detection/video_utils.py,sha256=M7yje6XeOnR_QwDyuG1o6bwTKvRysoA2NiOK2MSi98E,53943
 megadetector/postprocessing/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/postprocessing/add_max_conf.py,sha256=9MYtsH2mwkiaZb7Qcor5J_HskfAj7d9srp8G_Qldpk0,1722
 megadetector/postprocessing/categorize_detections_by_size.py,sha256=DpZpRNFlyeOfWuOc6ICuENgIWDCEtiErJ_frBZp9lYM,5382
-megadetector/postprocessing/classification_postprocessing.py,sha256=klHi5OFQx0LTQntg384llZeSmrxUWEm2HJQmEU-sG8U,60710
+megadetector/postprocessing/classification_postprocessing.py,sha256=OoPVr34vXyLykB42SplcSKo9cj7dgf8Yju_DCDhd6_k,68574
 megadetector/postprocessing/combine_batch_outputs.py,sha256=BEP8cVa0sMIPg7tkWQc_8vOEPnbmWjOsQdVJHe61uz8,8468
 megadetector/postprocessing/compare_batch_results.py,sha256=RDlKLwea76rOWiDneSJUj6P_oMBMnD2BY4inoxLqQiw,84258
-megadetector/postprocessing/convert_output_format.py,sha256=FiwKSiMyEeNVLLfjpQtx3CrMbchwNUaW2TgLmdXGFVo,14892
+megadetector/postprocessing/convert_output_format.py,sha256=3KLO6NqddofgIEYjV8_iZIf0iXaplFN2AroUq5i4R7k,14472
 megadetector/postprocessing/create_crop_folder.py,sha256=T37HnvBEakikXY3n3Bgk5boFo_0-Z5aKnkEWXv-Ki4s,23166
 megadetector/postprocessing/detector_calibration.py,sha256=UFjJ8D6tMghatLRj3CyrtJ7vrPIJkULMNsYMIj98j2M,20495
 megadetector/postprocessing/generate_csv_report.py,sha256=KIGT8zFZev-cl4YOCq2BqnodBWsZG-7CZaWuep_211U,19169
@@ -100,7 +100,7 @@ megadetector/postprocessing/postprocess_batch_results.py,sha256=VJyXx8I6KZgefrLN
 megadetector/postprocessing/remap_detection_categories.py,sha256=BE6Ce-PGBEx1FyG3XwbYp2D5sh5xUlVf6fonaMuPMAg,7927
 megadetector/postprocessing/render_detection_confusion_matrix.py,sha256=oNvDTh5td5ynELNnhz4XaLP2HiwLuojkJlob15TpgcY,26365
 megadetector/postprocessing/separate_detections_into_folders.py,sha256=Yvpkl_MsWbGoo4zvQHrXHkATRJaYdYligItfg9bvuV8,32262
-megadetector/postprocessing/subset_json_detector_output.py,sha256=FiP1sUYfIBqOiSwjkJ6qkj4hvlF7yJsF7-y9tmfSShc,32187
+megadetector/postprocessing/subset_json_detector_output.py,sha256=R6CtSMcriXq50EHawXWC5pHZ-vtJFSKqjeleGKiouDY,32325
 megadetector/postprocessing/top_folders_to_bottom.py,sha256=zYrqMHjUZG8urh2CYphfs91ZQ620uqe-TL8jVYy8KVw,6049
 megadetector/postprocessing/validate_batch_results.py,sha256=9nr7LeKMdki9Y821ag2bZFQCxuq0OqINDH7cPXyVcY8,12059
 megadetector/postprocessing/repeat_detection_elimination/find_repeat_detections.py,sha256=XgVeyga8iSC01MAjXxb2rn-CgJTYHqC_gfxxEoSn4aw,9420
@@ -121,17 +121,17 @@ megadetector/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuF
 megadetector/tests/test_nms_synthetic.py,sha256=oY6xmT1sLSSN7weQJ8TPTaZgAiSiZ6s43EffUhwLWIw,14707
 megadetector/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/utils/ct_utils.py,sha256=IiZV8dWtJamveINv_joATMgMPHeDkZ8l82jDEQcLgQg,60502
-megadetector/utils/directory_listing.py,sha256=CZBzwg0Fus1xuRAp3ycEBjViDdwwk4eKdGq06ZERLDg,6414
+megadetector/utils/directory_listing.py,sha256=0-VMuQWo6rETIKERqfX6Zn7pRp_GJ4JiFiWvsw9PQcU,6500
 megadetector/utils/extract_frames_from_video.py,sha256=vjSVgxtb5z2syHCVYWc2KdNUpc-O6yY8nkbj_wqsIvY,12255
 megadetector/utils/gpu_test.py,sha256=5zUfAVeSjH8I08eCqayFmMxL-0mix8SjJJTe5ORABvU,3544
 megadetector/utils/md_tests.py,sha256=Iup4KjyIpLUpZ4TzzwEyGK61rg6aH7NrEQsdQ-ov51I,80300
-megadetector/utils/path_utils.py,sha256=qU1jTBHYy11i5vOMslFEUjc1VBnxQHnDCPYkVzuUXms,98686
+megadetector/utils/path_utils.py,sha256=tV8eh77m_uS8YYpOQZO8GUKR6l5sZrSSIkApqgi_DmY,101030
 megadetector/utils/process_utils.py,sha256=gQcpH9WYvGPUs0FhtJ5_Xvl6JsvoGz8_mnDQk0PbTRM,5673
 megadetector/utils/split_locations_into_train_val.py,sha256=fd_6pj1aWY6hybwaXvBn9kBcOHjI90U-OsTmEAGpeu8,10297
 megadetector/utils/string_utils.py,sha256=r2Maw3zbzk3EyaZcNkdqr96yP_8m4ey6v0WxlemEY9U,6155
-megadetector/utils/url_utils.py,sha256=VWYDHbWctTtw7mvbb_A5DTdF3v9V2mWhBoOP5MGE5S8,25728
+megadetector/utils/url_utils.py,sha256=PzqN-VquAZFBRin2ZaYi5U2WCsMYSwvM0X-NN45Fdh4,28448
 megadetector/utils/wi_platform_utils.py,sha256=8CGpiox_aL6RVZKfJqPVwpW4_6Cjku0HIajJPcmeNpE,32019
-megadetector/utils/wi_taxonomy_utils.py,sha256=VTlWqZqNBplpvTvg7E_tCh88RdG_wf-6jE6ahU7GOuI,66173
+megadetector/utils/wi_taxonomy_utils.py,sha256=o4AvY5gZXfk69pPckdGxgIPhqsH2-hJQucavSRsUnoc,66513
 megadetector/utils/write_html_image_list.py,sha256=6Tbe5wyUxoBYJgH9yVrxxKCeWF2BVre_wQMEOQJ-ZIU,9068
 megadetector/visualization/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 megadetector/visualization/plot_utils.py,sha256=uDDlOhdaJ3V8sGj2kS9b0cgszKc8WCq2_ofl6TW_XUs,10727
@@ -139,9 +139,9 @@ megadetector/visualization/render_images_with_thumbnails.py,sha256=-XX4PG4wnrFjF
 megadetector/visualization/visualization_utils.py,sha256=E5uvysS3F1S_yiPFxZty3U2f6cjuE8zG6XWggYOu-5o,75921
 megadetector/visualization/visualize_db.py,sha256=8YDWSR0eMehXYdPtak9z8UUw35xV7hu-0eCuzgSLjWc,25558
 megadetector/visualization/visualize_detector_output.py,sha256=HpWh7ugwo51YBHsFi40iAp9G-uRAMMjgsm8H_uBolBs,20295
-megadetector/visualization/visualize_video_output.py,sha256=4A5uit_JVV46kZCsO6j0bZ5-o6ZTAlXKuVvvR_xWpho,20266
-megadetector-10.0.6.dist-info/licenses/LICENSE,sha256=RMa3qq-7Cyk7DdtqRj_bP1oInGFgjyHn9-PZ3PcrqIs,1100
-megadetector-10.0.6.dist-info/METADATA,sha256=KjAHAEEE_ELiV6BtcFx_bfjKJg9fxFFEOF_0uHtbp3s,6352
-megadetector-10.0.6.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-megadetector-10.0.6.dist-info/top_level.txt,sha256=wf9DXa8EwiOSZ4G5IPjakSxBPxTDjhYYnqWRfR-zS4M,13
-megadetector-10.0.6.dist-info/RECORD,,
+megadetector/visualization/visualize_video_output.py,sha256=ibMGB5ynMwNXmaMlY8h8tURb-Lyvuxs1EB08x_jvev0,20606
+megadetector-10.0.8.dist-info/licenses/LICENSE,sha256=RMa3qq-7Cyk7DdtqRj_bP1oInGFgjyHn9-PZ3PcrqIs,1100
+megadetector-10.0.8.dist-info/METADATA,sha256=eMFedi5m5t_vYsJzAQsf7Q2Z9mHASAqEOuJjiQVWgZE,6486
+megadetector-10.0.8.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+megadetector-10.0.8.dist-info/top_level.txt,sha256=wf9DXa8EwiOSZ4G5IPjakSxBPxTDjhYYnqWRfR-zS4M,13
+megadetector-10.0.8.dist-info/RECORD,,