mat3ra-esse 2025.8.14.post0__py3-none-any.whl → 2025.8.20.post0__py3-none-any.whl
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- mat3ra/esse/data/examples.py +1 -1
- mat3ra/esse/data/schemas.py +1 -1
- mat3ra/esse/models/core/reference/__init__.py +5 -5
- mat3ra/esse/models/core/reference/experiment/__init__.py +2 -2
- mat3ra/esse/models/job/__init__.py +21 -21
- mat3ra/esse/models/material/__init__.py +8 -8
- mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/interstitial.py +17 -17
- mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/substitutional.py +17 -17
- mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/vacancy.py +8 -8
- mat3ra/esse/models/materials_category/pristine_structures/three_dimensional/ideal_crystal.py +8 -8
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/nanoribbon.py +26 -26
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/nanotape.py +17 -17
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab.py +17 -17
- mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab_strained_supercell.py +17 -17
- mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/point_defect_site.py +8 -8
- mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/void_region.py +8 -8
- mat3ra/esse/models/materials_category_components/entities/core/two_dimensional/vacuum.py +8 -8
- mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/strained_non_uniform.py +8 -8
- mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/strained_uniform.py +8 -8
- mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/supercell.py +8 -8
- mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/slab_stack_configuration.py +26 -26
- mat3ra/esse/models/materials_category_components/operations/core/modifications/perturb.py +8 -8
- mat3ra/esse/models/properties_directory/non_scalar/total_energy_contributions.py +26 -26
- mat3ra/esse/models/properties_directory/structural/molecular_pattern.py +4 -4
- mat3ra/esse/models/property/meta.py +2 -2
- mat3ra/esse/models/property/raw.py +2 -2
- mat3ra/esse/models/property/source.py +2 -2
- mat3ra/esse/models/workflow/__init__.py +19 -19
- mat3ra/esse/models/workflow/subworkflow/__init__.py +6 -6
- mat3ra/esse/models/workflow/subworkflow/unit.py +6 -6
- mat3ra/esse/models/workflow/unit/__init__.py +8 -8
- {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.8.20.post0.dist-info}/METADATA +1 -1
- {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.8.20.post0.dist-info}/RECORD +36 -51
- mat3ra/esse/models/software_directory/ml/__init__.py +0 -3
- mat3ra/esse/models/software_directory/ml/exabyteml.py +0 -28
- mat3ra/esse/models/software_directory/ml/unit/__init__.py +0 -3
- mat3ra/esse/models/software_directory/ml/unit/execution/__init__.py +0 -879
- mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/__init__.py +0 -3
- mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/cross_validate.py +0 -293
- mat3ra/esse/models/software_directory/ml/unit/execution/initialize.py +0 -293
- mat3ra/esse/models/software_directory/ml/unit/execution/score.py +0 -286
- mat3ra/esse/models/software_directory/ml/unit/execution/train.py +0 -297
- mat3ra/esse/models/software_directory/ml/unit/processing/__init__.py +0 -276
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/__init__.py +0 -167
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/manipulation.py +0 -144
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.py +0 -163
- mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/__init__.py +0 -148
- mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/filter_based.py +0 -144
- {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.8.20.post0.dist-info}/WHEEL +0 -0
- {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.8.20.post0.dist-info}/licenses/LICENSE.md +0 -0
- {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.8.20.post0.dist-info}/top_level.txt +0 -0
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class Name605(Enum):
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symmetry = "symmetry"
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class MaterialConsistencyCheckSchema(BaseModel):
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class Name700(Enum):
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hartree_fock = "hartree_fock"
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class ScalarSchema94(BaseModel):
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value: float
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class Name701(Enum):
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total_energy_contributions = "total_energy_contributions"
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@@ -194,5 +194,5 @@ class TotalEnergyContributionsSchema(BaseModel):
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"""
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hartree-fock contribution
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"""
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name: Optional[Name701] = None
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units: Optional[Units] = None
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@@ -37,12 +37,12 @@ class FunctionalGroupPatternSchema(BaseModel):
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"""
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-
class
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+
class Name517(Enum):
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|
ring = "ring"
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|
class RingPatternSchema(BaseModel):
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-
name: Optional[
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|
+
name: Optional[Name517] = None
|
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46
46
|
atoms: Optional[List[ObjectWithId]] = Field(None, title="array of ids")
|
|
47
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|
"""
|
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|
array of objects containing integer id each
|
|
@@ -50,12 +50,12 @@ class RingPatternSchema(BaseModel):
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50
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|
isAromatic: Optional[bool] = None
|
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|
-
class
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|
+
class Name518(Enum):
|
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54
54
|
special_bond = "special_bond"
|
|
55
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|
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|
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57
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|
class SpecialBondPatternSchema(BaseModel):
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name: Optional[
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+
name: Optional[Name518] = None
|
|
59
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|
atoms: Optional[List[ObjectWithId]] = Field(None, title="array of ids")
|
|
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|
"""
|
|
61
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|
array of objects containing integer id each
|
|
@@ -55,7 +55,7 @@ class LocationSchema(BaseModel):
|
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55
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|
"""
|
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56
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|
-
class
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|
+
class Type46(Enum):
|
|
59
59
|
literature = "literature"
|
|
60
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|
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|
61
61
|
|
|
@@ -65,7 +65,7 @@ class PagesSchema(BaseModel):
|
|
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65
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|
|
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66
66
|
|
|
67
67
|
class LiteratureReferenceSchema(BaseModel):
|
|
68
|
-
type: Optional[
|
|
68
|
+
type: Optional[Type46] = None
|
|
69
69
|
doi: Optional[str] = None
|
|
70
70
|
"""
|
|
71
71
|
Digital Object Identifier of the reference.
|
|
@@ -55,7 +55,7 @@ class LocationSchema(BaseModel):
|
|
|
55
55
|
"""
|
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56
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|
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|
58
|
-
class
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|
+
class Type55(Enum):
|
|
59
59
|
literature = "literature"
|
|
60
60
|
|
|
61
61
|
|
|
@@ -65,7 +65,7 @@ class PagesSchema(BaseModel):
|
|
|
65
65
|
|
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66
66
|
|
|
67
67
|
class LiteratureReferenceSchema(BaseModel):
|
|
68
|
-
type: Optional[
|
|
68
|
+
type: Optional[Type55] = None
|
|
69
69
|
doi: Optional[str] = None
|
|
70
70
|
"""
|
|
71
71
|
Digital Object Identifier of the reference.
|
|
@@ -51,7 +51,7 @@ class LocationSchema(BaseModel):
|
|
|
51
51
|
"""
|
|
52
52
|
|
|
53
53
|
|
|
54
|
-
class
|
|
54
|
+
class Type64(Enum):
|
|
55
55
|
literature = "literature"
|
|
56
56
|
|
|
57
57
|
|
|
@@ -61,7 +61,7 @@ class PagesSchema(BaseModel):
|
|
|
61
61
|
|
|
62
62
|
|
|
63
63
|
class LiteratureReferenceSchema(BaseModel):
|
|
64
|
-
type: Optional[
|
|
64
|
+
type: Optional[Type64] = None
|
|
65
65
|
doi: Optional[str] = None
|
|
66
66
|
"""
|
|
67
67
|
Digital Object Identifier of the reference.
|
|
@@ -222,7 +222,7 @@ class DataIOUnitSchema(BaseModel):
|
|
|
222
222
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
223
223
|
|
|
224
224
|
|
|
225
|
-
class
|
|
225
|
+
class Type92(Enum):
|
|
226
226
|
reduce = "reduce"
|
|
227
227
|
|
|
228
228
|
|
|
@@ -319,7 +319,7 @@ class ReduceUnitSchema(BaseModel):
|
|
|
319
319
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
320
320
|
|
|
321
321
|
|
|
322
|
-
class
|
|
322
|
+
class Type93(Enum):
|
|
323
323
|
condition = "condition"
|
|
324
324
|
|
|
325
325
|
|
|
@@ -432,7 +432,7 @@ class ConditionUnitSchema(BaseModel):
|
|
|
432
432
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
433
433
|
|
|
434
434
|
|
|
435
|
-
class
|
|
435
|
+
class Type94(Enum):
|
|
436
436
|
assertion = "assertion"
|
|
437
437
|
|
|
438
438
|
|
|
@@ -518,7 +518,7 @@ class AssertionUnitSchema(BaseModel):
|
|
|
518
518
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
519
519
|
|
|
520
520
|
|
|
521
|
-
class
|
|
521
|
+
class Type95(Enum):
|
|
522
522
|
execution = "execution"
|
|
523
523
|
|
|
524
524
|
|
|
@@ -773,7 +773,7 @@ class ExecutionUnitSchemaBase(BaseModel):
|
|
|
773
773
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
774
774
|
|
|
775
775
|
|
|
776
|
-
class
|
|
776
|
+
class Type96(Enum):
|
|
777
777
|
assignment = "assignment"
|
|
778
778
|
|
|
779
779
|
|
|
@@ -864,7 +864,7 @@ class AssignmentUnitSchema(BaseModel):
|
|
|
864
864
|
scope: Optional[str] = None
|
|
865
865
|
|
|
866
866
|
|
|
867
|
-
class
|
|
867
|
+
class Type97(Enum):
|
|
868
868
|
processing = "processing"
|
|
869
869
|
|
|
870
870
|
|
|
@@ -1192,7 +1192,7 @@ class Subworkflow(BaseModel):
|
|
|
1192
1192
|
"""
|
|
1193
1193
|
|
|
1194
1194
|
|
|
1195
|
-
class
|
|
1195
|
+
class Type98(Enum):
|
|
1196
1196
|
io = "io"
|
|
1197
1197
|
|
|
1198
1198
|
|
|
@@ -1326,7 +1326,7 @@ class DataIOUnitSchema7(BaseModel):
|
|
|
1326
1326
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
1327
1327
|
|
|
1328
1328
|
|
|
1329
|
-
class
|
|
1329
|
+
class Type99(Enum):
|
|
1330
1330
|
reduce = "reduce"
|
|
1331
1331
|
|
|
1332
1332
|
|
|
@@ -1412,7 +1412,7 @@ class ReduceUnitSchema7(BaseModel):
|
|
|
1412
1412
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
1413
1413
|
|
|
1414
1414
|
|
|
1415
|
-
class
|
|
1415
|
+
class Type100(Enum):
|
|
1416
1416
|
condition = "condition"
|
|
1417
1417
|
|
|
1418
1418
|
|
|
@@ -1514,7 +1514,7 @@ class ConditionUnitSchema7(BaseModel):
|
|
|
1514
1514
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
1515
1515
|
|
|
1516
1516
|
|
|
1517
|
-
class
|
|
1517
|
+
class Type101(Enum):
|
|
1518
1518
|
assertion = "assertion"
|
|
1519
1519
|
|
|
1520
1520
|
|
|
@@ -1600,11 +1600,11 @@ class AssertionUnitSchema7(BaseModel):
|
|
|
1600
1600
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
1601
1601
|
|
|
1602
1602
|
|
|
1603
|
-
class
|
|
1603
|
+
class Type102(Enum):
|
|
1604
1604
|
execution = "execution"
|
|
1605
1605
|
|
|
1606
1606
|
|
|
1607
|
-
class
|
|
1607
|
+
class ExecutableSchema10(BaseModel):
|
|
1608
1608
|
name: str
|
|
1609
1609
|
"""
|
|
1610
1610
|
The name of the executable. e.g. pw.x
|
|
@@ -1652,7 +1652,7 @@ class ExecutableSchema18(BaseModel):
|
|
|
1652
1652
|
"""
|
|
1653
1653
|
|
|
1654
1654
|
|
|
1655
|
-
class
|
|
1655
|
+
class FlavorSchema10(BaseModel):
|
|
1656
1656
|
executableId: Optional[str] = None
|
|
1657
1657
|
"""
|
|
1658
1658
|
_id of the executable this flavor belongs to
|
|
@@ -1720,8 +1720,8 @@ class ExecutionUnitSchemaBase7(BaseModel):
|
|
|
1720
1720
|
type of the unit
|
|
1721
1721
|
"""
|
|
1722
1722
|
application: ApplicationSchemaBase = Field(..., title="application schema (base)")
|
|
1723
|
-
executable: Optional[
|
|
1724
|
-
flavor: Optional[
|
|
1723
|
+
executable: Optional[ExecutableSchema10] = Field(None, title="executable schema")
|
|
1724
|
+
flavor: Optional[FlavorSchema10] = Field(None, title="flavor schema")
|
|
1725
1725
|
input: Any
|
|
1726
1726
|
"""
|
|
1727
1727
|
unit input (type to be specified by the application's execution unit)
|
|
@@ -1792,7 +1792,7 @@ class ExecutionUnitSchemaBase7(BaseModel):
|
|
|
1792
1792
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
1793
1793
|
|
|
1794
1794
|
|
|
1795
|
-
class
|
|
1795
|
+
class Type103(Enum):
|
|
1796
1796
|
assignment = "assignment"
|
|
1797
1797
|
|
|
1798
1798
|
|
|
@@ -1883,7 +1883,7 @@ class AssignmentUnitSchema7(BaseModel):
|
|
|
1883
1883
|
scope: Optional[str] = None
|
|
1884
1884
|
|
|
1885
1885
|
|
|
1886
|
-
class
|
|
1886
|
+
class Type104(Enum):
|
|
1887
1887
|
processing = "processing"
|
|
1888
1888
|
|
|
1889
1889
|
|
|
@@ -1973,7 +1973,7 @@ class ProcessingUnitSchema7(BaseModel):
|
|
|
1973
1973
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
1974
1974
|
|
|
1975
1975
|
|
|
1976
|
-
class
|
|
1976
|
+
class Type105(Enum):
|
|
1977
1977
|
map = "map"
|
|
1978
1978
|
|
|
1979
1979
|
|
|
@@ -2079,7 +2079,7 @@ class MapUnitSchema(BaseModel):
|
|
|
2079
2079
|
statusTrack: Optional[List[StatusTrackItem]] = None
|
|
2080
2080
|
|
|
2081
2081
|
|
|
2082
|
-
class
|
|
2082
|
+
class Type106(Enum):
|
|
2083
2083
|
subworkflow = "subworkflow"
|
|
2084
2084
|
|
|
2085
2085
|
|