mat3ra-esse 2025.8.14.post0__py3-none-any.whl → 2025.10.8.post0__py3-none-any.whl

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  1. mat3ra/esse/data/examples.py +1 -1
  2. mat3ra/esse/data/schemas.py +1 -1
  3. mat3ra/esse/models/core/abstract/_2d_data.py +2 -2
  4. mat3ra/esse/models/core/abstract/_2d_plot.py +2 -6
  5. mat3ra/esse/models/core/primitive/_1d_data_series.py +3 -3
  6. mat3ra/esse/models/core/primitive/axis_3d_names_enum.py +13 -0
  7. mat3ra/esse/models/core/reference/__init__.py +8 -8
  8. mat3ra/esse/models/core/reference/exabyte.py +2 -8
  9. mat3ra/esse/models/core/reference/experiment/__init__.py +2 -2
  10. mat3ra/esse/models/core/reusable/coordinate_conditions/__init__.py +1 -78
  11. mat3ra/esse/models/core/reusable/coordinate_conditions/index.py +80 -0
  12. mat3ra/esse/models/core/reusable/hubbard_parameters.py +48 -0
  13. mat3ra/esse/models/core/reusable/kpoint.py +16 -0
  14. mat3ra/esse/models/core/reusable/repetition.py +14 -0
  15. mat3ra/esse/models/definitions/material.py +13 -0
  16. mat3ra/esse/models/element.py +10 -8
  17. mat3ra/esse/models/job/__init__.py +62 -62
  18. mat3ra/esse/models/material/__init__.py +12 -12
  19. mat3ra/esse/models/materials_category/compound_pristine_structures/two_dimensional/interface/configuration.py +80 -80
  20. mat3ra/esse/models/materials_category/defective_structures/one_dimensional/grain_boundary_linear/configuration.py +80 -80
  21. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/adatom/configuration.py +35 -35
  22. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/grain_boundary_planar/configuration.py +80 -80
  23. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/island/configuration.py +53 -53
  24. mat3ra/esse/models/materials_category/defective_structures/two_dimensional/terrace/configuration.py +53 -53
  25. mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/interstitial.py +29 -29
  26. mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/substitutional.py +32 -32
  27. mat3ra/esse/models/materials_category/defective_structures/zero_dimensional/point_defect/vacancy.py +12 -12
  28. mat3ra/esse/models/materials_category/pristine_structures/three_dimensional/ideal_crystal.py +12 -12
  29. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/nanoribbon.py +52 -52
  30. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/nanotape.py +32 -32
  31. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab.py +32 -32
  32. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab_strained_supercell.py +32 -32
  33. mat3ra/esse/models/materials_category/pristine_structures/two_dimensional/slab_strained_supercell_with_gap.py +1151 -0
  34. mat3ra/esse/models/materials_category/processed_structures/two_dimensional/passivation/configuration.py +17 -17
  35. mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/crystal_site.py +8 -8
  36. mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/point_defect_site.py +12 -12
  37. mat3ra/esse/models/materials_category_components/entities/auxiliary/zero_dimensional/void_region.py +12 -12
  38. mat3ra/esse/models/materials_category_components/entities/core/three_dimensional/crystal.py +8 -8
  39. mat3ra/esse/models/materials_category_components/entities/core/two_dimensional/vacuum.py +12 -12
  40. mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines.py +8 -8
  41. mat3ra/esse/models/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines_unique_repeated.py +8 -8
  42. mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/crystal_lattice_base.py +8 -8
  43. mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/strained_non_uniform.py +12 -12
  44. mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/strained_uniform.py +12 -12
  45. mat3ra/esse/models/materials_category_components/entities/reusable/three_dimensional/supercell.py +12 -12
  46. mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/crystal_lattice_planes.py +8 -8
  47. mat3ra/esse/models/materials_category_components/entities/reusable/two_dimensional/slab_stack_configuration.py +52 -52
  48. mat3ra/esse/models/materials_category_components/operations/core/modifications/perturb.py +12 -12
  49. mat3ra/esse/models/methods_directory/physical/psp/__init__.py +2 -2
  50. mat3ra/esse/models/methods_directory/physical/psp/file.py +2 -2
  51. mat3ra/esse/models/methods_directory/physical/psp/file_data_item.py +2 -2
  52. mat3ra/esse/models/properties_directory/derived_properties.py +6 -6
  53. mat3ra/esse/models/properties_directory/elemental/atomic_radius.py +1 -1
  54. mat3ra/esse/models/properties_directory/elemental/electronegativity.py +1 -2
  55. mat3ra/esse/models/properties_directory/elemental/ionization_potential.py +3 -4
  56. mat3ra/esse/models/properties_directory/jupyter_notebook_endpoint.py +20 -0
  57. mat3ra/esse/models/properties_directory/non_scalar/average_potential_profile.py +4 -8
  58. mat3ra/esse/models/properties_directory/non_scalar/band_gaps.py +2 -2
  59. mat3ra/esse/models/properties_directory/non_scalar/band_structure.py +5 -9
  60. mat3ra/esse/models/properties_directory/non_scalar/charge_density_profile.py +4 -8
  61. mat3ra/esse/models/properties_directory/non_scalar/density_of_states.py +5 -8
  62. mat3ra/esse/models/properties_directory/non_scalar/dielectric_tensor.py +2 -2
  63. mat3ra/esse/models/properties_directory/non_scalar/file_content.py +2 -2
  64. mat3ra/esse/models/properties_directory/non_scalar/final_structure.py +22 -0
  65. mat3ra/esse/models/properties_directory/non_scalar/hubbard_u.py +4 -4
  66. mat3ra/esse/models/properties_directory/non_scalar/hubbard_v.py +3 -4
  67. mat3ra/esse/models/properties_directory/non_scalar/hubbard_v_nn.py +3 -4
  68. mat3ra/esse/models/properties_directory/non_scalar/is_relaxed.py +22 -0
  69. mat3ra/esse/models/properties_directory/non_scalar/phonon_dispersions.py +10 -14
  70. mat3ra/esse/models/properties_directory/non_scalar/phonon_dos.py +10 -14
  71. mat3ra/esse/models/properties_directory/non_scalar/potential_profile.py +8 -12
  72. mat3ra/esse/models/properties_directory/non_scalar/reaction_energy_profile.py +8 -12
  73. mat3ra/esse/models/properties_directory/non_scalar/stress_tensor.py +5 -7
  74. mat3ra/esse/models/properties_directory/non_scalar/total_energy_contributions.py +64 -51
  75. mat3ra/esse/models/properties_directory/non_scalar/vibrational_spectrum.py +10 -14
  76. mat3ra/esse/models/properties_directory/non_scalar/workflow.py +2234 -0
  77. mat3ra/esse/models/properties_directory/reusable/hubbard_parameters.py +48 -0
  78. mat3ra/esse/models/properties_directory/scalar/electron_affinity.py +1 -1
  79. mat3ra/esse/models/properties_directory/scalar/fermi_energy.py +1 -1
  80. mat3ra/esse/models/properties_directory/scalar/formation_energy.py +1 -1
  81. mat3ra/esse/models/properties_directory/scalar/ionization_potential.py +3 -3
  82. mat3ra/esse/models/properties_directory/scalar/pressure.py +3 -4
  83. mat3ra/esse/models/properties_directory/scalar/reaction_energy_barrier.py +3 -3
  84. mat3ra/esse/models/properties_directory/scalar/surface_energy.py +3 -3
  85. mat3ra/esse/models/properties_directory/scalar/total_energy.py +3 -3
  86. mat3ra/esse/models/properties_directory/scalar/total_force.py +3 -4
  87. mat3ra/esse/models/properties_directory/scalar/valence_band_offset.py +3 -3
  88. mat3ra/esse/models/properties_directory/scalar/zero_point_energy.py +3 -3
  89. mat3ra/esse/models/properties_directory/structural/atomic_forces.py +5 -5
  90. mat3ra/esse/models/properties_directory/structural/basis/atomic_constraints_property.py +3 -3
  91. mat3ra/esse/models/properties_directory/structural/basis/boundary_conditions.py +30 -0
  92. mat3ra/esse/models/properties_directory/structural/basis/predicted_properties.py +82 -0
  93. mat3ra/esse/models/properties_directory/structural/lattice/units/__init__.py +23 -1
  94. mat3ra/esse/models/properties_directory/structural/magnetic_moments.py +5 -5
  95. mat3ra/esse/models/properties_directory/structural/molecular_pattern.py +5 -5
  96. mat3ra/esse/models/properties_directory/structural/patterns/functional_group.py +1 -1
  97. mat3ra/esse/models/properties_directory/structural/patterns/ring.py +1 -1
  98. mat3ra/esse/models/properties_directory/structural/patterns/special_bond.py +1 -1
  99. mat3ra/esse/models/properties_directory/workflow/convergence/electronic.py +4 -4
  100. mat3ra/esse/models/properties_directory/workflow/convergence/ionic.py +6 -6
  101. mat3ra/esse/models/property/base.py +1492 -14
  102. mat3ra/esse/models/property/holder.py +3568 -0
  103. mat3ra/esse/models/property/meta_holder/Reusable_schema_for_energy_value_with_unit_corresponding_to_a_specific_accuracy_level__e/g.py +31 -0
  104. mat3ra/esse/models/property/meta_holder.py +140 -0
  105. mat3ra/esse/models/property/proto_holder.py +86 -0
  106. mat3ra/esse/models/property/raw.py +27 -11
  107. mat3ra/esse/models/property/source.py +24 -1
  108. mat3ra/esse/models/workflow/__init__.py +54 -54
  109. mat3ra/esse/models/workflow/base_flow.py +4 -4
  110. mat3ra/esse/models/workflow/subworkflow/__init__.py +7 -7
  111. mat3ra/esse/models/workflow/subworkflow/unit.py +10 -10
  112. mat3ra/esse/models/workflow/unit/__init__.py +12 -12
  113. mat3ra/esse/models/workflow/unit/io/__init__.py +4 -4
  114. mat3ra/esse/models/workflow/unit/io/db.py +2 -2
  115. mat3ra/esse/models/workflow/unit/io/object_storage.py +1 -1
  116. {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.10.8.post0.dist-info}/METADATA +1 -1
  117. {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.10.8.post0.dist-info}/RECORD +122 -118
  118. mat3ra/esse/models/property/meta.py +0 -200
  119. mat3ra/esse/models/software_directory/ml/exabyteml.py +0 -28
  120. mat3ra/esse/models/software_directory/ml/unit/execution/__init__.py +0 -879
  121. mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/__init__.py +0 -3
  122. mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/cross_validate.py +0 -293
  123. mat3ra/esse/models/software_directory/ml/unit/execution/initialize.py +0 -293
  124. mat3ra/esse/models/software_directory/ml/unit/execution/score.py +0 -286
  125. mat3ra/esse/models/software_directory/ml/unit/execution/train.py +0 -297
  126. mat3ra/esse/models/software_directory/ml/unit/processing/__init__.py +0 -276
  127. mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/__init__.py +0 -167
  128. mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/manipulation.py +0 -144
  129. mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.py +0 -163
  130. mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/__init__.py +0 -148
  131. mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/filter_based.py +0 -144
  132. /mat3ra/esse/models/{software_directory/ml → properties_directory/reusable}/__init__.py +0 -0
  133. /mat3ra/esse/models/{software_directory/ml/unit → property/meta_holder/Reusable_schema_for_energy_value_with_unit_corresponding_to_a_specific_accuracy_level__e}/__init__.py +0 -0
  134. {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.10.8.post0.dist-info}/WHEEL +0 -0
  135. {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.10.8.post0.dist-info}/licenses/LICENSE.md +0 -0
  136. {mat3ra_esse-2025.8.14.post0.dist-info → mat3ra_esse-2025.10.8.post0.dist-info}/top_level.txt +0 -0
@@ -48,16 +48,12 @@ class Name(Enum):
48
48
  charge_density_profile = "charge_density_profile"
49
49
 
50
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51
- class ChargeDensityProfileSchema(BaseModel):
51
+ class ChargeDensityProfilePropertySchema(BaseModel):
52
52
  xAxis: AxisSchema = Field(..., title="axis schema")
53
53
  yAxis: AxisSchema8 = Field(..., title="axis schema")
54
- name: Optional[Name] = None
55
- legend: Optional[List] = Field(None, min_length=1)
56
- """
57
- Legend of y Axis data series
58
- """
59
- xDataArray: List
54
+ name: Name
55
+ xDataArray: List[Union[float, List[float]]]
60
56
  """
61
57
  array containing values of x Axis
62
58
  """
63
- yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
59
+ yDataSeries: List[List[float]] = Field(..., title="1 dimension data series schema")
@@ -82,16 +82,13 @@ class LegendItem(BaseModel):
82
82
  """
83
83
 
84
84
 
85
- class DensityOfStatesSchema(BaseModel):
85
+ class DensityOfStatesPropertySchema(BaseModel):
86
86
  xAxis: AxisSchema = Field(..., title="axis schema")
87
87
  yAxis: AxisSchema10 = Field(..., title="axis schema")
88
- name: Optional[Name] = None
89
- legend: Optional[List[LegendItem]] = Field(None, min_length=1)
90
- """
91
- Legend of y Axis data series
92
- """
93
- xDataArray: List
88
+ name: Name
89
+ legend: List[LegendItem]
90
+ xDataArray: List[Union[float, List[float]]]
94
91
  """
95
92
  array containing values of x Axis
96
93
  """
97
- yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
94
+ yDataSeries: List[List[float]] = Field(..., title="1 dimension data series schema")
@@ -35,6 +35,6 @@ class DielectricTensor(BaseModel):
35
35
  """
36
36
 
37
37
 
38
- class DielectricTensorProperty(BaseModel):
38
+ class DielectricTensorPropertySchema(BaseModel):
39
39
  name: Name
40
- values: Optional[List[DielectricTensor]] = None
40
+ values: List[DielectricTensor]
@@ -47,9 +47,9 @@ class ObjectStorageContainerData(BaseModel):
47
47
  """
48
48
 
49
49
 
50
- class FileContent(BaseModel):
50
+ class FileContentPropertySchema(BaseModel):
51
51
  name: Name
52
- filetype: Optional[Filetype] = None
52
+ filetype: Filetype
53
53
  """
54
54
  What kind of file this is, e.g. image / text
55
55
  """
@@ -0,0 +1,22 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/final_structure.json
3
+ # version: 0.28.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+
9
+ from pydantic import BaseModel
10
+
11
+
12
+ class Name(Enum):
13
+ final_structure = "final_structure"
14
+
15
+
16
+ class FinalStructurePropertySchema(BaseModel):
17
+ name: Name
18
+ isRelaxed: bool
19
+ materialId: str
20
+ """
21
+ Material's identity
22
+ """
@@ -5,7 +5,7 @@
5
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  from __future__ import annotations
6
6
 
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  from enum import Enum
8
- from typing import List, Optional
8
+ from typing import List
9
9
 
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  from pydantic import BaseModel, constr
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@@ -34,7 +34,7 @@ class AtomicDataPerOrbitalNumeric(BaseModel):
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  """
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37
- class HubbardUParameters(BaseModel):
37
+ class HubbardUParametersPropertySchema(BaseModel):
38
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  name: Name
39
- units: Optional[Units] = None
40
- values: Optional[List[AtomicDataPerOrbitalNumeric]] = None
39
+ units: Units
40
+ values: List[AtomicDataPerOrbitalNumeric]
@@ -12,7 +12,6 @@ from pydantic import BaseModel, constr
12
12
 
13
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  class Name(Enum):
14
14
  hubbard_v = "hubbard_v"
15
- hubbard_v_nn = "hubbard_v_nn"
16
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17
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18
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  class Units(Enum):
@@ -48,7 +47,7 @@ class AtomicDataPerOrbitalPairNumeric(BaseModel):
48
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  """
49
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51
- class HubbardVParameters(BaseModel):
50
+ class HubbardVParametersPropertySchema(BaseModel):
52
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  name: Name
53
- units: Optional[Units] = None
54
- values: Optional[List[AtomicDataPerOrbitalPairNumeric]] = None
52
+ units: Units
53
+ values: List[AtomicDataPerOrbitalPairNumeric]
@@ -11,7 +11,6 @@ from pydantic import BaseModel, constr
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12
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13
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  class Name(Enum):
14
- hubbard_v = "hubbard_v"
15
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  hubbard_v_nn = "hubbard_v_nn"
16
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@@ -48,7 +47,7 @@ class AtomicDataPerOrbitalPairNumeric(BaseModel):
48
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  """
49
48
 
50
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51
- class HubbardVParametersForNearestNeighbors(BaseModel):
50
+ class HubbardVNNParametersPropertySchema(BaseModel):
52
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  name: Name
53
- units: Optional[Units] = None
54
- values: Optional[List[AtomicDataPerOrbitalPairNumeric]] = None
52
+ units: Units
53
+ values: List[AtomicDataPerOrbitalPairNumeric]
@@ -0,0 +1,22 @@
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+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/is_relaxed.json
3
+ # version: 0.28.5
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+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+
9
+ from pydantic import BaseModel
10
+
11
+
12
+ class Name(Enum):
13
+ is_relaxed = "is_relaxed"
14
+
15
+
16
+ class IsRelaxedPropertySchema(BaseModel):
17
+ name: Name
18
+ value: bool
19
+ materialId: str
20
+ """
21
+ Material's identity
22
+ """
@@ -30,22 +30,22 @@ class AxisSchema(BaseModel):
30
30
  """
31
31
 
32
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33
- class Label9(Enum):
33
+ class Label25(Enum):
34
34
  frequency = "frequency"
35
35
 
36
36
 
37
- class Units231(Enum):
37
+ class Units272(Enum):
38
38
  cm_1 = "cm-1"
39
39
  THz = "THz"
40
40
  meV = "meV"
41
41
 
42
42
 
43
- class AxisSchema12(BaseModel):
44
- label: Label9
43
+ class AxisSchema28(BaseModel):
44
+ label: Label25
45
45
  """
46
46
  label of an axis object
47
47
  """
48
- units: Optional[Units231] = None
48
+ units: Optional[Units272] = None
49
49
  """
50
50
  units for an axis
51
51
  """
@@ -55,16 +55,12 @@ class Name(Enum):
55
55
  phonon_dispersions = "phonon_dispersions"
56
56
 
57
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58
- class PhononBandStructureSchema(BaseModel):
58
+ class PhononBandStructurePropertySchema(BaseModel):
59
59
  xAxis: AxisSchema = Field(..., title="axis schema")
60
- yAxis: AxisSchema12 = Field(..., title="axis schema")
61
- name: Optional[Name] = None
62
- legend: Optional[List] = Field(None, min_length=1)
63
- """
64
- Legend of y Axis data series
65
- """
66
- xDataArray: List
60
+ yAxis: AxisSchema28 = Field(..., title="axis schema")
61
+ name: Name
62
+ xDataArray: List[Union[float, List[float]]]
67
63
  """
68
64
  array containing values of x Axis
69
65
  """
70
- yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
66
+ yDataSeries: List[List[float]] = Field(..., title="1 dimension data series schema")
@@ -31,22 +31,22 @@ class AxisSchema(BaseModel):
31
31
  """
32
32
 
33
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34
- class Label11(Enum):
34
+ class Label27(Enum):
35
35
  Phonon_DOS = "Phonon DOS"
36
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37
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38
- class Units233(Enum):
38
+ class Units274(Enum):
39
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  states_cm_1 = "states/cm-1"
40
40
  states_THz = "states/THz"
41
41
  states_meV = "states/meV"
42
42
 
43
43
 
44
- class AxisSchema14(BaseModel):
45
- label: Label11
44
+ class AxisSchema30(BaseModel):
45
+ label: Label27
46
46
  """
47
47
  label of an axis object
48
48
  """
49
- units: Optional[Units233] = None
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+ units: Optional[Units274] = None
50
50
  """
51
51
  units for an axis
52
52
  """
@@ -56,16 +56,12 @@ class Name(Enum):
56
56
  phonon_dos = "phonon_dos"
57
57
 
58
58
 
59
- class PhononDensityOfStatesSchema(BaseModel):
59
+ class PhononDensityOfStatesPropertySchema(BaseModel):
60
60
  xAxis: AxisSchema = Field(..., title="axis schema")
61
- yAxis: AxisSchema14 = Field(..., title="axis schema")
62
- name: Optional[Name] = None
63
- legend: Optional[List] = Field(None, min_length=1)
64
- """
65
- Legend of y Axis data series
66
- """
67
- xDataArray: List
61
+ yAxis: AxisSchema30 = Field(..., title="axis schema")
62
+ name: Name
63
+ xDataArray: List[Union[float, List[float]]]
68
64
  """
69
65
  array containing values of x Axis
70
66
  """
71
- yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
67
+ yDataSeries: List[List[float]] = Field(..., title="1 dimension data series schema")
@@ -25,7 +25,7 @@ class AxisSchema(BaseModel):
25
25
  """
26
26
 
27
27
 
28
- class Label13(Enum):
28
+ class Label29(Enum):
29
29
  energy = "energy"
30
30
 
31
31
 
@@ -39,8 +39,8 @@ class Units(Enum):
39
39
  eV_atom = "eV/atom"
40
40
 
41
41
 
42
- class AxisSchema16(BaseModel):
43
- label: Label13
42
+ class AxisSchema32(BaseModel):
43
+ label: Label29
44
44
  """
45
45
  label of an axis object
46
46
  """
@@ -54,16 +54,12 @@ class Name(Enum):
54
54
  potential_profile = "potential_profile"
55
55
 
56
56
 
57
- class PotentialProfileSchema(BaseModel):
57
+ class PotentialProfilePropertySchema(BaseModel):
58
58
  xAxis: AxisSchema = Field(..., title="axis schema")
59
- yAxis: AxisSchema16 = Field(..., title="axis schema")
60
- name: Optional[Name] = None
61
- legend: Optional[List] = Field(None, min_length=1)
62
- """
63
- Legend of y Axis data series
64
- """
65
- xDataArray: List
59
+ yAxis: AxisSchema32 = Field(..., title="axis schema")
60
+ name: Name
61
+ xDataArray: List[Union[float, List[float]]]
66
62
  """
67
63
  array containing values of x Axis
68
64
  """
69
- yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
65
+ yDataSeries: List[List[float]] = Field(..., title="1 dimension data series schema")
@@ -25,7 +25,7 @@ class AxisSchema(BaseModel):
25
25
  """
26
26
 
27
27
 
28
- class Label15(Enum):
28
+ class Label31(Enum):
29
29
  energy = "energy"
30
30
 
31
31
 
@@ -39,8 +39,8 @@ class Units(Enum):
39
39
  eV_atom = "eV/atom"
40
40
 
41
41
 
42
- class AxisSchema18(BaseModel):
43
- label: Label15
42
+ class AxisSchema34(BaseModel):
43
+ label: Label31
44
44
  """
45
45
  label of an axis object
46
46
  """
@@ -54,16 +54,12 @@ class Name(Enum):
54
54
  reaction_energy_profile = "reaction_energy_profile"
55
55
 
56
56
 
57
- class ReactionEnergyProfileSchema(BaseModel):
57
+ class ReactionEnergyProfilePropertySchema(BaseModel):
58
58
  xAxis: AxisSchema = Field(..., title="axis schema")
59
- yAxis: AxisSchema18 = Field(..., title="axis schema")
60
- name: Optional[Name] = None
61
- legend: Optional[List] = Field(None, min_length=1)
62
- """
63
- Legend of y Axis data series
64
- """
65
- xDataArray: List
59
+ yAxis: AxisSchema34 = Field(..., title="axis schema")
60
+ name: Name
61
+ xDataArray: List[Union[float, List[float]]]
66
62
  """
67
63
  array containing values of x Axis
68
64
  """
69
- yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
65
+ yDataSeries: List[List[float]] = Field(..., title="1 dimension data series schema")
@@ -5,7 +5,7 @@
5
5
  from __future__ import annotations
6
6
 
7
7
  from enum import Enum
8
- from typing import List, Optional
8
+ from typing import List
9
9
 
10
10
  from pydantic import BaseModel, Field, RootModel
11
11
 
@@ -23,9 +23,7 @@ class Units(Enum):
23
23
  pa = "pa"
24
24
 
25
25
 
26
- class StressTensorSchema(BaseModel):
27
- value: Optional[List[ArrayOf3NumberElementsSchema]] = Field(
28
- None, max_length=3, min_length=3, title="matrix 3x3 schema"
29
- )
30
- name: Optional[Name] = None
31
- units: Optional[Units] = None
26
+ class StressTensorPropertySchema(BaseModel):
27
+ value: List[ArrayOf3NumberElementsSchema] = Field(..., max_length=3, min_length=3, title="matrix 3x3 schema")
28
+ name: Name
29
+ units: Units
@@ -19,115 +19,124 @@ class ScalarSchema(BaseModel):
19
19
  value: float
20
20
 
21
21
 
22
- class Name690(Enum):
22
+ class Name743(Enum):
23
23
  harris_foulkes = "harris_foulkes"
24
24
 
25
25
 
26
- class ScalarSchema83(BaseModel):
27
- name: Optional[Name690] = None
26
+ class ScalarSchema97(BaseModel):
27
+ name: Optional[Name743] = None
28
28
  value: float
29
29
 
30
30
 
31
- class Name691(Enum):
31
+ class Name744(Enum):
32
+ smearing = "smearing"
33
+
34
+
35
+ class ScalarSchema98(BaseModel):
36
+ name: Optional[Name744] = None
37
+ value: float
38
+
39
+
40
+ class Name745(Enum):
32
41
  one_electron = "one_electron"
33
42
 
34
43
 
35
- class ScalarSchema84(BaseModel):
36
- name: Optional[Name691] = None
44
+ class ScalarSchema99(BaseModel):
45
+ name: Optional[Name745] = None
37
46
  value: float
38
47
 
39
48
 
40
- class Name692(Enum):
49
+ class Name746(Enum):
41
50
  hartree = "hartree"
42
51
 
43
52
 
44
- class ScalarSchema85(BaseModel):
45
- name: Optional[Name692] = None
53
+ class ScalarSchema100(BaseModel):
54
+ name: Optional[Name746] = None
46
55
  value: float
47
56
 
48
57
 
49
- class Name693(Enum):
58
+ class Name747(Enum):
50
59
  exchange = "exchange"
51
60
 
52
61
 
53
- class ScalarSchema86(BaseModel):
54
- name: Optional[Name693] = None
62
+ class ScalarSchema101(BaseModel):
63
+ name: Optional[Name747] = None
55
64
  value: float
56
65
 
57
66
 
58
- class Name694(Enum):
67
+ class Name748(Enum):
59
68
  exchange_correlation = "exchange_correlation"
60
69
 
61
70
 
62
- class ScalarSchema87(BaseModel):
63
- name: Optional[Name694] = None
71
+ class ScalarSchema102(BaseModel):
72
+ name: Optional[Name748] = None
64
73
  value: float
65
74
 
66
75
 
67
- class Name695(Enum):
76
+ class Name749(Enum):
68
77
  ewald = "ewald"
69
78
 
70
79
 
71
- class ScalarSchema88(BaseModel):
72
- name: Optional[Name695] = None
80
+ class ScalarSchema103(BaseModel):
81
+ name: Optional[Name749] = None
73
82
  value: float
74
83
 
75
84
 
76
- class Name696(Enum):
85
+ class Name750(Enum):
77
86
  alphaZ = "alphaZ"
78
87
 
79
88
 
80
- class ScalarSchema89(BaseModel):
81
- name: Optional[Name696] = None
89
+ class ScalarSchema104(BaseModel):
90
+ name: Optional[Name750] = None
82
91
  value: float
83
92
 
84
93
 
85
- class Name697(Enum):
94
+ class Name751(Enum):
86
95
  atomic_energy = "atomic_energy"
87
96
 
88
97
 
89
- class ScalarSchema90(BaseModel):
90
- name: Optional[Name697] = None
98
+ class ScalarSchema105(BaseModel):
99
+ name: Optional[Name751] = None
91
100
  value: float
92
101
 
93
102
 
94
- class Name698(Enum):
103
+ class Name752(Enum):
95
104
  eigenvalues = "eigenvalues"
96
105
 
97
106
 
98
- class ScalarSchema91(BaseModel):
99
- name: Optional[Name698] = None
107
+ class ScalarSchema106(BaseModel):
108
+ name: Optional[Name752] = None
100
109
  value: float
101
110
 
102
111
 
103
- class Name699(Enum):
112
+ class Name753(Enum):
104
113
  PAW_double_counting_correction_2 = "PAW_double-counting_correction_2"
105
114
 
106
115
 
107
- class ScalarSchema92(BaseModel):
108
- name: Optional[Name699] = None
116
+ class ScalarSchema107(BaseModel):
117
+ name: Optional[Name753] = None
109
118
  value: float
110
119
 
111
120
 
112
- class Name700(Enum):
121
+ class Name754(Enum):
113
122
  PAW_double_counting_correction_3 = "PAW_double-counting_correction_3"
114
123
 
115
124
 
116
- class ScalarSchema93(BaseModel):
117
- name: Optional[Name700] = None
125
+ class ScalarSchema108(BaseModel):
126
+ name: Optional[Name754] = None
118
127
  value: float
119
128
 
120
129
 
121
- class Name701(Enum):
130
+ class Name755(Enum):
122
131
  hartree_fock = "hartree_fock"
123
132
 
124
133
 
125
- class ScalarSchema94(BaseModel):
126
- name: Optional[Name701] = None
134
+ class ScalarSchema109(BaseModel):
135
+ name: Optional[Name755] = None
127
136
  value: float
128
137
 
129
138
 
130
- class Name702(Enum):
139
+ class Name756(Enum):
131
140
  total_energy_contributions = "total_energy_contributions"
132
141
 
133
142
 
@@ -141,58 +150,62 @@ class Units(Enum):
141
150
  eV_atom = "eV/atom"
142
151
 
143
152
 
144
- class TotalEnergyContributionsSchema(BaseModel):
153
+ class TotalEnergyContributionsPropertySchema(BaseModel):
145
154
  temperatureEntropy: Optional[ScalarSchema] = Field(None, title="scalar schema")
146
155
  """
147
156
  product of temperature and configurational entropy
148
157
  """
149
- harrisFoulkes: Optional[ScalarSchema83] = Field(None, title="scalar schema")
158
+ harris_foulkes: Optional[ScalarSchema97] = Field(None, title="scalar schema")
150
159
  """
151
160
  non self-consitent energy based on an input charge density
152
161
  """
153
- oneElectron: Optional[ScalarSchema84] = Field(None, title="scalar schema")
162
+ smearing: Optional[ScalarSchema98] = Field(None, title="scalar schema")
163
+ """
164
+ smearing energy
165
+ """
166
+ one_electron: Optional[ScalarSchema99] = Field(None, title="scalar schema")
154
167
  """
155
168
  kinetic + pseudopotential energy
156
169
  """
157
- hartree: Optional[ScalarSchema85] = Field(None, title="scalar schema")
170
+ hartree: Optional[ScalarSchema100] = Field(None, title="scalar schema")
158
171
  """
159
172
  energy due to coulomb potential
160
173
  """
161
- exchange: Optional[ScalarSchema86] = Field(None, title="scalar schema")
174
+ exchange: Optional[ScalarSchema101] = Field(None, title="scalar schema")
162
175
  """
163
176
  exchange energy
164
177
  """
165
- exchangeCorrelation: Optional[ScalarSchema87] = Field(None, title="scalar schema")
178
+ exchange_correlation: Optional[ScalarSchema102] = Field(None, title="scalar schema")
166
179
  """
167
180
  exchange and correlation energy per particle
168
181
  """
169
- ewald: Optional[ScalarSchema88] = Field(None, title="scalar schema")
182
+ ewald: Optional[ScalarSchema103] = Field(None, title="scalar schema")
170
183
  """
171
184
  summation of interaction energies at long length scales due to coloumbic interactions
172
185
  """
173
- alphaZ: Optional[ScalarSchema89] = Field(None, title="scalar schema")
186
+ alphaZ: Optional[ScalarSchema104] = Field(None, title="scalar schema")
174
187
  """
175
188
  divergent electrostatic ion interaction in compensating electron gas
176
189
  """
177
- atomicEnergy: Optional[ScalarSchema90] = Field(None, title="scalar schema")
190
+ atomicEnergy: Optional[ScalarSchema105] = Field(None, title="scalar schema")
178
191
  """
179
192
  kinetic energy of wavefunctions in the atomic limit
180
193
  """
181
- eigenvalues: Optional[ScalarSchema91] = Field(None, title="scalar schema")
194
+ eigenvalues: Optional[ScalarSchema106] = Field(None, title="scalar schema")
182
195
  """
183
196
  sum of one electron energies of kinetic, electrostatic, and exchange correlation
184
197
  """
185
- PAWDoubleCounting2: Optional[ScalarSchema92] = Field(None, title="scalar schema")
198
+ PAWDoubleCounting2: Optional[ScalarSchema107] = Field(None, title="scalar schema")
186
199
  """
187
200
  double counting correction 2
188
201
  """
189
- PAWDoubleCounting3: Optional[ScalarSchema93] = Field(None, title="scalar schema")
202
+ PAWDoubleCounting3: Optional[ScalarSchema108] = Field(None, title="scalar schema")
190
203
  """
191
204
  double counting correction 3
192
205
  """
193
- hartreeFock: Optional[ScalarSchema94] = Field(None, title="scalar schema")
206
+ hartreeFock: Optional[ScalarSchema109] = Field(None, title="scalar schema")
194
207
  """
195
208
  hartree-fock contribution
196
209
  """
197
- name: Optional[Name702] = None
210
+ name: Name756
198
211
  units: Optional[Units] = None
@@ -32,25 +32,25 @@ class AxisSchema(BaseModel):
32
32
  """
33
33
 
34
34
 
35
- class Label17(Enum):
35
+ class Label33(Enum):
36
36
  Intensity = "Intensity"
37
37
  Absorbance = "Absorbance"
38
38
  Absorption_coefficient = "Absorption coefficient"
39
39
 
40
40
 
41
- class Units295(Enum):
41
+ class Units336(Enum):
42
42
  field_debye_angstrom__2 = "(debye/angstrom)^2"
43
43
  km_mol = "km/mol"
44
44
  m_mol = "m/mol"
45
45
  a_u_ = "a.u."
46
46
 
47
47
 
48
- class AxisSchema20(BaseModel):
49
- label: Label17
48
+ class AxisSchema36(BaseModel):
49
+ label: Label33
50
50
  """
51
51
  label of an axis object
52
52
  """
53
- units: Optional[Units295] = None
53
+ units: Optional[Units336] = None
54
54
  """
55
55
  units for an axis
56
56
  """
@@ -60,16 +60,12 @@ class Name(Enum):
60
60
  vibrational_spectrum = "vibrational_spectrum"
61
61
 
62
62
 
63
- class VibrationalSpectrumSchema(BaseModel):
63
+ class VibrationalSpectrumPropertySchema(BaseModel):
64
64
  xAxis: AxisSchema = Field(..., title="axis schema")
65
- yAxis: AxisSchema20 = Field(..., title="axis schema")
66
- name: Optional[Name] = None
67
- legend: Optional[List] = Field(None, min_length=1)
68
- """
69
- Legend of y Axis data series
70
- """
71
- xDataArray: List
65
+ yAxis: AxisSchema36 = Field(..., title="axis schema")
66
+ name: Name
67
+ xDataArray: List[Union[float, List[float]]]
72
68
  """
73
69
  array containing values of x Axis
74
70
  """
75
- yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
71
+ yDataSeries: List[List[float]] = Field(..., title="1 dimension data series schema")