mat3ra-esse 2025.1.27.post0__py3-none-any.whl → 2025.4.3.post0__py3-none-any.whl
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- mat3ra/esse/data/schemas.py +1 -1
- mat3ra/esse/models/__init__.py +1 -1
- mat3ra/esse/models/core/__init__.py +1 -1
- mat3ra/esse/models/core/abstract/_2d_data.py +17 -0
- mat3ra/esse/models/core/abstract/_2d_plot.py +34 -0
- mat3ra/esse/models/core/abstract/_3d_grid.py +14 -0
- mat3ra/esse/models/core/abstract/_3d_tensor.py +19 -0
- mat3ra/esse/models/core/abstract/_3d_vector_basis.py +15 -0
- mat3ra/esse/models/core/abstract/__init__.py +1 -1
- mat3ra/esse/models/core/abstract/point.py +1 -1
- mat3ra/esse/models/core/abstract/vector.py +1 -1
- mat3ra/esse/models/core/primitive/_1d_data_series.py +13 -0
- mat3ra/esse/models/core/primitive/_3d_lattice.py +34 -0
- mat3ra/esse/models/core/primitive/__init__.py +1 -1
- mat3ra/esse/models/core/primitive/array_of_3_booleans.py +1 -1
- mat3ra/esse/models/core/primitive/array_of_3_numbers.py +1 -1
- mat3ra/esse/models/core/primitive/array_of_ids.py +1 -1
- mat3ra/esse/models/core/primitive/array_of_strings.py +1 -1
- mat3ra/esse/models/core/primitive/axis.py +1 -1
- mat3ra/esse/models/core/primitive/group_info.py +1 -1
- mat3ra/esse/models/core/primitive/integer_one_or_zero.py +1 -1
- mat3ra/esse/models/core/primitive/integer_positive_single_digit.py +11 -0
- mat3ra/esse/models/core/primitive/linked_list/__init__.py +1 -1
- mat3ra/esse/models/core/primitive/linked_list/base_node.py +1 -1
- mat3ra/esse/models/core/primitive/linked_list/named_node.py +1 -1
- mat3ra/esse/models/core/primitive/linked_list/named_node_in_group.py +1 -1
- mat3ra/esse/models/core/primitive/linked_list/node_with_type.py +1 -1
- mat3ra/esse/models/core/primitive/scalar.py +1 -1
- mat3ra/esse/models/core/primitive/slugified_entry.py +1 -1
- mat3ra/esse/models/core/primitive/slugified_entry_or_slug.py +1 -1
- mat3ra/esse/models/core/primitive/string.py +1 -1
- mat3ra/esse/models/core/reference/__init__.py +1 -1
- mat3ra/esse/models/core/reference/exabyte.py +1 -1
- mat3ra/esse/models/core/reference/experiment/__init__.py +1 -1
- mat3ra/esse/models/core/reference/experiment/condition.py +1 -1
- mat3ra/esse/models/core/reference/experiment/location.py +1 -1
- mat3ra/esse/models/core/reference/literature/__init__.py +1 -1
- mat3ra/esse/models/core/reference/literature/name.py +1 -1
- mat3ra/esse/models/core/reference/literature/pages.py +1 -1
- mat3ra/esse/models/core/reference/modeling/__init__.py +1 -1
- mat3ra/esse/models/core/reference/modeling/exabyte.py +1 -1
- mat3ra/esse/models/core/reusable/__init__.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_data/__init__.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_data/per_orbital.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_data/per_orbital_pair.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_data/value_number.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_data/value_string.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_data_per_orbital_numeric.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_data_per_orbital_pair_numeric.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_orbital.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_scalars.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_strings.py +1 -1
- mat3ra/esse/models/core/reusable/atomic_vectors.py +1 -1
- mat3ra/esse/models/core/reusable/band_gap.py +1 -1
- mat3ra/esse/models/core/reusable/categories.py +1 -1
- mat3ra/esse/models/core/reusable/category_path.py +1 -1
- mat3ra/esse/models/core/reusable/dielectric_tensor_component.py +1 -1
- mat3ra/esse/models/core/reusable/energy.py +3 -3
- mat3ra/esse/models/core/reusable/file_metadata.py +1 -1
- mat3ra/esse/models/core/reusable/frequency_function_matrix.py +1 -1
- mat3ra/esse/models/core/reusable/object_storage_container_data.py +1 -1
- mat3ra/esse/models/definitions/__init__.py +1 -1
- mat3ra/esse/models/definitions/constants.py +40 -0
- mat3ra/esse/models/definitions/units.py +4 -4
- mat3ra/esse/models/element.py +7 -8
- mat3ra/esse/models/in_memory_entity/__init__.py +1 -1
- mat3ra/esse/models/in_memory_entity/base.py +1 -1
- mat3ra/esse/models/in_memory_entity/defaultable.py +1 -1
- mat3ra/esse/models/in_memory_entity/has_consistency_check_has_metadata_named_defaultable.py +1 -1
- mat3ra/esse/models/in_memory_entity/named.py +1 -1
- mat3ra/esse/models/in_memory_entity/named_defaultable.py +1 -1
- mat3ra/esse/models/in_memory_entity/named_defaultable_has_metadata.py +1 -1
- mat3ra/esse/models/in_memory_entity/named_defaultable_runtime_items.py +1 -1
- mat3ra/esse/models/job/__init__.py +12 -13
- mat3ra/esse/models/job/base.py +1 -1
- mat3ra/esse/models/job/compute.py +1 -1
- mat3ra/esse/models/material/__init__.py +41 -71
- mat3ra/esse/models/material/consistency_check.py +1 -1
- mat3ra/esse/models/material/conventional.py +1 -1
- mat3ra/esse/models/method/__init__.py +1 -1
- mat3ra/esse/models/method/categorized_method.py +1 -1
- mat3ra/esse/models/method/method_parameters.py +1 -1
- mat3ra/esse/models/method/unit_method.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/diff/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/diff/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/diff/fd.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/mesh/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/mesh/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/mesh/hybrid.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/mesh/nstruct.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/mesh/struct/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/mesh/struct/cartesian.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/discr/mesh/struct/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/fapprx/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/fapprx/basisexp.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/fapprx/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/lin.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/poly.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/spline.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/analytic/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/analytic/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/analytic/volume.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/diffeq/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/diffeq/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/diffeq/order1.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/diffeq/order2.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/numquad/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/numquad/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/numquad/gauss.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/numquad/newcot.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/transf/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/transf/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/intgr/transf/fourier.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/linalg/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/linalg/dcomp.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/linalg/diag/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/linalg/diag/davidson.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/linalg/diag/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/linalg/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/linalg/lintra.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/linalg/matf.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/bracket.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/local.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/order1.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/order2.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/ordern/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/ordern/cg.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/diff/ordern/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/ndiff/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/ndiff/direct.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/ndiff/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/ndiff/pop.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/ndiff/stoch.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/root/__init__.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/root/bracket.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/root/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/opt/root/iter.py +1 -1
- mat3ra/esse/models/methods_category/mathematical/regression.py +1 -1
- mat3ra/esse/models/methods_category/physical/__init__.py +1 -1
- mat3ra/esse/models/methods_category/physical/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/__init__.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/__init__.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/ao/__init__.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/ao/dunning.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/ao/other.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/ao/pople.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/enum_options.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/psp.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/pw.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/smearing.py +1 -1
- mat3ra/esse/models/methods_category/physical/qm/wf/tetrahedron.py +1 -1
- mat3ra/esse/models/methods_directory/legacy/__init__.py +1 -1
- mat3ra/esse/models/methods_directory/legacy/localorbital.py +1 -1
- mat3ra/esse/models/methods_directory/legacy/pseudopotential.py +1 -1
- mat3ra/esse/models/methods_directory/legacy/regression.py +1 -1
- mat3ra/esse/models/methods_directory/legacy/unknown.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/__init__.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/cg.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/davidson.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/__init__.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/data.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/dataset.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/kernel_ridge/__init__.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/kernel_ridge/data_per_property.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/linear/__init__.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/linear/data_per_property.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/per_feature_item.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/precision.py +1 -1
- mat3ra/esse/models/methods_directory/mathematical/regression/precision_per_property.py +1 -1
- mat3ra/esse/models/methods_directory/physical/__init__.py +1 -1
- mat3ra/esse/models/methods_directory/physical/ao/__init__.py +1 -1
- mat3ra/esse/models/methods_directory/physical/ao/dunning.py +1 -1
- mat3ra/esse/models/methods_directory/physical/ao/enum_options.py +1 -1
- mat3ra/esse/models/methods_directory/physical/ao/other.py +1 -1
- mat3ra/esse/models/methods_directory/physical/ao/pople.py +1 -1
- mat3ra/esse/models/methods_directory/physical/psp/__init__.py +1 -1
- mat3ra/esse/models/methods_directory/physical/psp/file.py +1 -1
- mat3ra/esse/models/methods_directory/physical/psp/file_data_item.py +1 -1
- mat3ra/esse/models/methods_directory/physical/pw.py +1 -1
- mat3ra/esse/models/methods_directory/physical/smearing.py +1 -1
- mat3ra/esse/models/methods_directory/physical/tetrahedron.py +1 -1
- mat3ra/esse/models/model/__init__.py +1 -1
- mat3ra/esse/models/model/categorized_model.py +1 -1
- mat3ra/esse/models/model/mixins/__init__.py +1 -1
- mat3ra/esse/models/model/mixins/dft/__init__.py +1 -3
- mat3ra/esse/models/model/mixins/dft/double_hybrid_functional.py +1 -1
- mat3ra/esse/models/model/mixins/dft/enum_options.py +1 -1
- mat3ra/esse/models/model/mixins/dft/gga_functional.py +1 -1
- mat3ra/esse/models/model/mixins/dft/hybrid_functional.py +1 -1
- mat3ra/esse/models/model/mixins/dft/lda_functional.py +1 -1
- mat3ra/esse/models/model/mixins/dft/mgga_functional.py +1 -1
- mat3ra/esse/models/model/mixins/dispersion_correction.py +1 -1
- mat3ra/esse/models/model/mixins/enum_options.py +1 -1
- mat3ra/esse/models/model/mixins/hubbard.py +1 -1
- mat3ra/esse/models/model/mixins/spin_orbit_coupling.py +1 -1
- mat3ra/esse/models/model/mixins/spin_polarization.py +1 -1
- mat3ra/esse/models/model/model_parameters.py +1 -1
- mat3ra/esse/models/model/model_without_method.py +1 -1
- mat3ra/esse/models/models_category/__init__.py +1 -1
- mat3ra/esse/models/models_category/enum_options.py +1 -1
- mat3ra/esse/models/models_category/pb/__init__.py +1 -1
- mat3ra/esse/models/models_category/pb/enum_options.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/__init__.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/abin/__init__.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/abin/enum_options.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/abin/gw.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/__init__.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/enum_options.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/ksdft/__init__.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/ksdft/double_hybrid.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/ksdft/enum_options.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/ksdft/gga.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/ksdft/hybrid.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/ksdft/lda.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/dft/ksdft/mgga.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/enum_options.py +1 -1
- mat3ra/esse/models/models_category/pb/qm/semp.py +1 -1
- mat3ra/esse/models/models_category/st/__init__.py +1 -1
- mat3ra/esse/models/models_category/st/det/__init__.py +1 -1
- mat3ra/esse/models/models_category/st/det/enum_options.py +1 -1
- mat3ra/esse/models/models_category/st/det/ml/__init__.py +1 -1
- mat3ra/esse/models/models_category/st/det/ml/enum_options.py +1 -1
- mat3ra/esse/models/models_category/st/det/ml/re.py +1 -1
- mat3ra/esse/models/models_category/st/enum_options.py +1 -1
- mat3ra/esse/models/models_directory/__init__.py +1 -1
- mat3ra/esse/models/models_directory/double_hybrid.py +1 -1
- mat3ra/esse/models/models_directory/gga.py +1 -1
- mat3ra/esse/models/models_directory/gw.py +1 -1
- mat3ra/esse/models/models_directory/hybrid.py +1 -1
- mat3ra/esse/models/models_directory/lda.py +1 -1
- mat3ra/esse/models/models_directory/legacy/__init__.py +1 -1
- mat3ra/esse/models/models_directory/legacy/dft.py +1 -1
- mat3ra/esse/models/models_directory/legacy/ml.py +1 -1
- mat3ra/esse/models/models_directory/legacy/unknown.py +1 -1
- mat3ra/esse/models/models_directory/mgga.py +1 -1
- mat3ra/esse/models/models_directory/re.py +1 -1
- mat3ra/esse/models/project.py +1 -1
- mat3ra/esse/models/properties_directory/__init__.py +1 -1
- mat3ra/esse/models/properties_directory/derived_properties.py +6 -7
- mat3ra/esse/models/properties_directory/electronic_configuration.py +1 -1
- mat3ra/esse/models/properties_directory/elemental/__init__.py +1 -1
- mat3ra/esse/models/properties_directory/elemental/atomic_radius.py +5 -6
- mat3ra/esse/models/properties_directory/elemental/electronegativity.py +1 -1
- mat3ra/esse/models/properties_directory/elemental/ionization_potential.py +1 -1
- mat3ra/esse/models/properties_directory/non_scalar/__init__.py +1 -1
- mat3ra/esse/models/properties_directory/non_scalar/average_potential_profile.py +5 -6
- mat3ra/esse/models/properties_directory/non_scalar/band_gaps.py +1 -1
- mat3ra/esse/models/properties_directory/non_scalar/band_structure.py +2 -11
- mat3ra/esse/models/properties_directory/non_scalar/charge_density_profile.py +3 -3
- mat3ra/esse/models/properties_directory/non_scalar/density_of_states.py +5 -5
- mat3ra/esse/models/properties_directory/non_scalar/dielectric_tensor.py +1 -1
- mat3ra/esse/models/properties_directory/non_scalar/file_content.py +1 -1
- mat3ra/esse/models/properties_directory/non_scalar/hubbard_u.py +1 -1
- mat3ra/esse/models/properties_directory/non_scalar/hubbard_v.py +1 -1
- mat3ra/esse/models/properties_directory/non_scalar/hubbard_v_nn.py +1 -1
- mat3ra/esse/models/properties_directory/non_scalar/phonon_dispersions.py +6 -15
- mat3ra/esse/models/properties_directory/non_scalar/phonon_dos.py +5 -5
- mat3ra/esse/models/properties_directory/non_scalar/potential_profile.py +3 -3
- mat3ra/esse/models/properties_directory/non_scalar/reaction_energy_profile.py +3 -3
- mat3ra/esse/models/properties_directory/non_scalar/stress_tensor.py +4 -4
- mat3ra/esse/models/properties_directory/non_scalar/total_energy_contributions.py +27 -27
- mat3ra/esse/models/properties_directory/non_scalar/vibrational_spectrum.py +5 -5
- mat3ra/esse/models/properties_directory/scalar/__init__.py +1 -1
- mat3ra/esse/models/properties_directory/scalar/electron_affinity.py +3 -3
- mat3ra/esse/models/properties_directory/scalar/fermi_energy.py +3 -3
- mat3ra/esse/models/properties_directory/scalar/formation_energy.py +3 -3
- mat3ra/esse/models/properties_directory/scalar/ionization_potential.py +3 -3
- mat3ra/esse/models/properties_directory/scalar/pressure.py +1 -1
- mat3ra/esse/models/properties_directory/scalar/reaction_energy_barrier.py +3 -3
- mat3ra/esse/models/properties_directory/scalar/surface_energy.py +3 -3
- mat3ra/esse/models/properties_directory/scalar/total_energy.py +3 -3
- mat3ra/esse/models/properties_directory/scalar/total_force.py +1 -1
- mat3ra/esse/models/properties_directory/scalar/valence_band_offset.py +3 -3
- mat3ra/esse/models/properties_directory/scalar/zero_point_energy.py +3 -3
- mat3ra/esse/models/properties_directory/structural/__init__.py +1 -1
- mat3ra/esse/models/properties_directory/structural/atomic_forces.py +1 -1
- mat3ra/esse/models/properties_directory/structural/basis/__init__.py +10 -36
- mat3ra/esse/models/properties_directory/structural/basis/atomic_constraints.py +1 -1
- mat3ra/esse/models/properties_directory/structural/basis/atomic_coordinate.py +1 -1
- mat3ra/esse/models/properties_directory/structural/basis/atomic_coordinates.py +5 -6
- mat3ra/esse/models/properties_directory/structural/basis/atomic_element.py +1 -1
- mat3ra/esse/models/properties_directory/structural/basis/atomic_label.py +14 -0
- mat3ra/esse/models/properties_directory/structural/basis/bonds.py +1 -1
- mat3ra/esse/models/properties_directory/structural/density.py +1 -1
- mat3ra/esse/models/properties_directory/structural/elemental_ratio.py +1 -1
- mat3ra/esse/models/properties_directory/structural/inchi.py +1 -1
- mat3ra/esse/models/properties_directory/structural/inchi_key.py +1 -1
- mat3ra/esse/models/properties_directory/structural/lattice/__init__.py +14 -17
- mat3ra/esse/models/properties_directory/structural/lattice/lattice_bravais.py +10 -7
- mat3ra/esse/models/properties_directory/structural/lattice/lattice_vectors.py +5 -6
- mat3ra/esse/models/properties_directory/structural/lattice/type_enum.py +2 -2
- mat3ra/esse/models/properties_directory/structural/lattice/type_extended_enum.py +4 -3
- mat3ra/esse/models/properties_directory/structural/magnetic_moments.py +1 -1
- mat3ra/esse/models/properties_directory/structural/molecular_pattern.py +5 -5
- mat3ra/esse/models/properties_directory/structural/p_norm.py +1 -1
- mat3ra/esse/models/properties_directory/structural/patterns/__init__.py +1 -1
- mat3ra/esse/models/properties_directory/structural/patterns/functional_group.py +1 -1
- mat3ra/esse/models/properties_directory/structural/patterns/ring.py +1 -1
- mat3ra/esse/models/properties_directory/structural/patterns/special_bond.py +1 -1
- mat3ra/esse/models/properties_directory/structural/symmetry.py +1 -1
- mat3ra/esse/models/properties_directory/structural/volume.py +1 -1
- mat3ra/esse/models/properties_directory/workflow/convergence/__init__.py +1 -1
- mat3ra/esse/models/properties_directory/workflow/convergence/electronic.py +1 -1
- mat3ra/esse/models/properties_directory/workflow/convergence/ionic.py +3 -3
- mat3ra/esse/models/properties_directory/workflow/convergence/kpoint.py +1 -1
- mat3ra/esse/models/property/__init__.py +1 -1
- mat3ra/esse/models/property/base/The_source_of_a_property/__init__.py +1 -3
- mat3ra/esse/models/property/base/The_source_of_a_property/field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.py +1 -1
- mat3ra/esse/models/property/base.py +200 -0
- mat3ra/esse/models/property/meta/The_source_of_a_property/__init__.py +1 -3
- mat3ra/esse/models/property/meta/The_source_of_a_property/field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.py +1 -1
- mat3ra/esse/models/property/meta.py +200 -0
- mat3ra/esse/models/property/raw/The_source_of_a_property/__init__.py +1 -3
- mat3ra/esse/models/property/raw/The_source_of_a_property/field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.py +1 -1
- mat3ra/esse/models/property/raw.py +200 -0
- mat3ra/esse/models/property/source/The_source_of_a_property/__init__.py +1 -3
- mat3ra/esse/models/property/source/The_source_of_a_property/field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.py +1 -1
- mat3ra/esse/models/property/source.py +150 -0
- mat3ra/esse/models/software/__init__.py +1 -1
- mat3ra/esse/models/software/application.py +1 -1
- mat3ra/esse/models/software/executable.py +1 -1
- mat3ra/esse/models/software/flavor.py +1 -1
- mat3ra/esse/models/software/template.py +1 -1
- mat3ra/esse/models/software_directory/ml/__init__.py +1 -1
- mat3ra/esse/models/software_directory/ml/exabyteml.py +1 -1
- mat3ra/esse/models/software_directory/ml/unit/__init__.py +1 -1
- mat3ra/esse/models/software_directory/ml/unit/execution/__init__.py +1 -1
- mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/__init__.py +1 -3
- mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/cross_validate.py +1 -1
- mat3ra/esse/models/software_directory/ml/unit/execution/initialize.py +1 -1
- mat3ra/esse/models/software_directory/ml/unit/execution/score.py +1 -1
- mat3ra/esse/models/software_directory/ml/unit/execution/train.py +1 -1
- mat3ra/esse/models/software_directory/ml/unit/processing/__init__.py +2 -2
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/__init__.py +2 -2
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/manipulation.py +4 -4
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.py +2 -2
- mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/__init__.py +1 -1
- mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/filter_based.py +1 -1
- mat3ra/esse/models/software_directory/modeling/__init__.py +1 -1
- mat3ra/esse/models/software_directory/modeling/deepmd.py +1 -1
- mat3ra/esse/models/software_directory/modeling/espresso/__init__.py +1 -1
- mat3ra/esse/models/software_directory/modeling/espresso/arguments.py +1 -1
- mat3ra/esse/models/software_directory/modeling/nwchem.py +1 -1
- mat3ra/esse/models/software_directory/modeling/unit/__init__.py +1 -1
- mat3ra/esse/models/software_directory/modeling/unit/execution.py +1 -1
- mat3ra/esse/models/software_directory/modeling/vasp.py +1 -1
- mat3ra/esse/models/software_directory/scripting/__init__.py +1 -1
- mat3ra/esse/models/software_directory/scripting/jupyter_lab.py +1 -1
- mat3ra/esse/models/software_directory/scripting/python.py +1 -1
- mat3ra/esse/models/software_directory/scripting/shell.py +1 -1
- mat3ra/esse/models/software_directory/scripting/unit/__init__.py +1 -1
- mat3ra/esse/models/software_directory/scripting/unit/execution.py +1 -1
- mat3ra/esse/models/system/__init__.py +1 -1
- mat3ra/esse/models/system/_material.py +1 -1
- mat3ra/esse/models/system/_parent_job.py +1 -1
- mat3ra/esse/models/system/_project.py +1 -1
- mat3ra/esse/models/system/bankable.py +1 -1
- mat3ra/esse/models/system/consistency_check.py +1 -1
- mat3ra/esse/models/system/creator.py +1 -1
- mat3ra/esse/models/system/creator_account.py +1 -1
- mat3ra/esse/models/system/database_source.py +1 -1
- mat3ra/esse/models/system/defaultable.py +1 -1
- mat3ra/esse/models/system/description.py +1 -1
- mat3ra/esse/models/system/entity_reference.py +1 -1
- mat3ra/esse/models/system/file_source.py +1 -1
- mat3ra/esse/models/system/has_consistency_check.py +1 -1
- mat3ra/esse/models/system/history.py +1 -1
- mat3ra/esse/models/system/iframe_message.py +1 -1
- mat3ra/esse/models/system/in_set.py +1 -1
- mat3ra/esse/models/system/is_multi_material.py +1 -1
- mat3ra/esse/models/system/is_outdated.py +1 -1
- mat3ra/esse/models/system/job_extended.py +1 -1
- mat3ra/esse/models/system/message.py +1 -1
- mat3ra/esse/models/system/metadata.py +1 -1
- mat3ra/esse/models/system/name.py +1 -1
- mat3ra/esse/models/system/owner.py +1 -1
- mat3ra/esse/models/system/path.py +1 -1
- mat3ra/esse/models/system/path_entity.py +1 -1
- mat3ra/esse/models/system/schema_version.py +1 -1
- mat3ra/esse/models/system/scope.py +1 -1
- mat3ra/esse/models/system/set.py +1 -1
- mat3ra/esse/models/system/sharing.py +1 -1
- mat3ra/esse/models/system/soft_removable.py +1 -1
- mat3ra/esse/models/system/status.py +1 -1
- mat3ra/esse/models/system/tags.py +1 -1
- mat3ra/esse/models/system/timestampable.py +5 -4
- mat3ra/esse/models/system/use_values.py +1 -1
- mat3ra/esse/models/third_party/db/nist_jarvis/{2024.3.13 → 2024_3.13}/__init__.py +1 -1
- mat3ra/esse/models/third_party/db/nist_jarvis/{2024.3.13 → 2024_3.13}/atoms.py +4 -4
- mat3ra/esse/models/third_party/db/nist_jarvis/{2024.3.13 → 2024_3.13}/db_entry.py +4 -4
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/__init__.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/__init__.py +2 -1989
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/atomic_positions.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/atomic_species.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/cell.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/cell_parameters.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/control.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/electrons.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/hubbard.py +6 -6
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/ions.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/k_points.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/system.py +1 -1
- mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw_x.py +1990 -0
- mat3ra/esse/models/workflow/__init__.py +12 -13
- mat3ra/esse/models/workflow/base.py +1 -1
- mat3ra/esse/models/workflow/base_flow.py +1 -1
- mat3ra/esse/models/workflow/scope.py +1 -1
- mat3ra/esse/models/workflow/subworkflow/__init__.py +6 -7
- mat3ra/esse/models/workflow/subworkflow/unit.py +6 -7
- mat3ra/esse/models/workflow/unit/__init__.py +8 -9
- mat3ra/esse/models/workflow/unit/assertion.py +1 -1
- mat3ra/esse/models/workflow/unit/assignment.py +1 -1
- mat3ra/esse/models/workflow/unit/base.py +1 -1
- mat3ra/esse/models/workflow/unit/condition.py +1 -1
- mat3ra/esse/models/workflow/unit/execution.py +1 -1
- mat3ra/esse/models/workflow/unit/input/__init__.py +1 -1
- mat3ra/esse/models/workflow/unit/input/_input.py +1 -1
- mat3ra/esse/models/workflow/unit/input/_inputItem.py +1 -1
- mat3ra/esse/models/workflow/unit/input/_inputItemId.py +1 -1
- mat3ra/esse/models/workflow/unit/input/_inputItemScope.py +1 -1
- mat3ra/esse/models/workflow/unit/input/_map_input/__init__.py +1 -1
- mat3ra/esse/models/workflow/unit/input/_map_input/values.py +1 -1
- mat3ra/esse/models/workflow/unit/io/__init__.py +2 -2
- mat3ra/esse/models/workflow/unit/io/api.py +1 -1
- mat3ra/esse/models/workflow/unit/io/db.py +3 -3
- mat3ra/esse/models/workflow/unit/io/object_storage.py +1 -1
- mat3ra/esse/models/workflow/unit/map.py +1 -1
- mat3ra/esse/models/workflow/unit/processing.py +1 -1
- mat3ra/esse/models/workflow/unit/reduce.py +1 -1
- mat3ra/esse/models/workflow/unit/runtime/__init__.py +1 -1
- mat3ra/esse/models/workflow/unit/runtime/_runtime_item_full_object.py +1 -1
- mat3ra/esse/models/workflow/unit/runtime/_runtime_item_name_object.py +1 -1
- mat3ra/esse/models/workflow/unit/runtime/_runtime_item_string.py +1 -1
- mat3ra/esse/models/workflow/unit/runtime/runtime_item.py +1 -1
- mat3ra/esse/models/workflow/unit/runtime/runtime_items.py +1 -1
- mat3ra/esse/models/workflow/unit/subworkflow.py +1 -1
- {mat3ra_esse-2025.1.27.post0.dist-info → mat3ra_esse-2025.4.3.post0.dist-info}/METADATA +3 -2
- mat3ra_esse-2025.4.3.post0.dist-info/RECORD +471 -0
- {mat3ra_esse-2025.1.27.post0.dist-info → mat3ra_esse-2025.4.3.post0.dist-info}/WHEEL +1 -1
- mat3ra_esse-2025.1.27.post0.dist-info/RECORD +0 -456
- {mat3ra_esse-2025.1.27.post0.dist-info → mat3ra_esse-2025.4.3.post0.dist-info/licenses}/LICENSE.md +0 -0
- {mat3ra_esse-2025.1.27.post0.dist-info → mat3ra_esse-2025.4.3.post0.dist-info}/top_level.txt +0 -0
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class LatticeTypeEnum(Enum):
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CUB = "CUB"
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BCC = "BCC"
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FCC = "FCC"
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# generated by datamodel-codegen:
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# filename: properties_directory/structural/lattice/type_extended_enum.json
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# version: 0.
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# version: 0.28.5
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from __future__ import annotations
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from enum import Enum
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class LatticeTypeExtendedEnum(Enum):
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BCC = "BCC"
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BCT_1 = "BCT-1"
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BCT_2 = "BCT-2"
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@@ -30,5 +30,6 @@ class LatticeTypeExtendedSchema(Enum):
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RHL_2 = "RHL-2"
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TET = "TET"
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TRI_1a = "TRI_1a"
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TRI_1b = "TRI_1b"
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TRI_2a = "TRI_2a"
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TRI_2b = "TRI_2b"
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# generated by datamodel-codegen:
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# filename: properties_directory/structural/molecular_pattern.json
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# version: 0.
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# version: 0.28.5
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from __future__ import annotations
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@@ -37,12 +37,12 @@ class FunctionalGroupPatternSchema(BaseModel):
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"""
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class Name55(Enum):
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ring = "ring"
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class RingPatternSchema(BaseModel):
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name: Optional[
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name: Optional[Name55] = None
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atoms: Optional[List[AtomicId]] = Field(None, title="atomic ids")
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"""
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array of objects containing integer id each
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@@ -50,12 +50,12 @@ class RingPatternSchema(BaseModel):
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isAromatic: Optional[bool] = None
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class Name56(Enum):
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special_bond = "special_bond"
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class SpecialBondPatternSchema(BaseModel):
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name: Optional[
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name: Optional[Name56] = None
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atoms: Optional[List[AtomicId]] = Field(None, title="atomic ids")
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"""
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array of objects containing integer id each
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# generated by datamodel-codegen:
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# filename: properties_directory/workflow/convergence/ionic.json
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# version: 0.
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# version: 0.28.5
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from __future__ import annotations
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@@ -18,14 +18,14 @@ class Units(Enum):
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eV = "eV"
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class
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class Units32(Enum):
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eV = "eV"
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rydberg = "rydberg"
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hartree = "hartree"
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class Electronic(BaseModel):
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units: Optional[
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units: Optional[Units32] = None
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"""
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units for force tolerance
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"""
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@@ -0,0 +1,200 @@
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# generated by datamodel-codegen:
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# filename: property/base.json
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# version: 0.28.5
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from __future__ import annotations
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from enum import Enum
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from typing import Any, Dict, List, Optional
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from pydantic import BaseModel, Field
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from .The_source_of_a_property import (
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field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc,
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)
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class Type(Enum):
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experiment = "experiment"
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class ExperimentAuthorSchema(BaseModel):
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first: str
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middle: Optional[str] = None
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last: str
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affiliation: Optional[str] = None
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class ScalarItem(BaseModel):
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value: Optional[str] = None
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class ConditionSchema(BaseModel):
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units: Optional[str] = None
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"""
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condition unit
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"""
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scalar: Optional[List[ScalarItem]] = None
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"""
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array of condition values
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"""
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name: str
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"""
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human-readable name of the condition
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"""
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class LocationSchema(BaseModel):
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latitude: float
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"""
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location latitude
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"""
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longitude: float
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"""
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location longitude
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+
"""
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class Type5(Enum):
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literature = "literature"
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class PagesSchema(BaseModel):
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start: str
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end: Optional[str] = None
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+
class LiteratureReferenceSchema(BaseModel):
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type: Optional[Type5] = None
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doi: Optional[str] = None
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"""
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Digital Object Identifier of the reference.
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"""
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isbn: Optional[str] = None
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"""
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International Standard Book Number of the reference.
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+
"""
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issn: Optional[str] = None
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"""
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International Standard Serial Number of the reference.
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"""
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url: Optional[str] = None
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"""
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Internet address of the reference.
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"""
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title: Optional[str] = None
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+
"""
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Title of the work.
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+
"""
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publisher: Optional[str] = None
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"""
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Publisher of the work.
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+
"""
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journal: Optional[str] = None
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+
"""
|
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Journal in which the work appeared.
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+
"""
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volume: Optional[str] = None
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"""
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Volume of the series in which the work appeared.
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"""
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year: Optional[str] = None
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"""
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Year in which the reference was published.
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+
"""
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issue: Optional[str] = None
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+
"""
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Issue of the collection in which the work appeared.
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"""
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+
pages: Optional[PagesSchema] = Field(None, title="pages schema")
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+
"""
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111
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+
Start and end pages of the work.
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"""
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authors: Optional[List[ExperimentAuthorSchema]] = None
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"""
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List of authors of the work.
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"""
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+
editors: Optional[List[ExperimentAuthorSchema]] = None
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+
"""
|
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|
+
List of editors of the work.
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+
"""
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|
+
reference: Optional[List[Dict[str, Any]]] = None
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+
"""
|
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+
References cited by the work. Reference objects can nest as deeply as needed. This is useful, for example, when tracking the history of a value referenced in a scholarly article; the top level reference would contain information about where the data was accessed while the nested reference would contain information about where it was originally published.
|
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124
|
+
"""
|
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125
|
+
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126
|
+
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|
+
class InfoForCharacteristicObtainedByExperiment(BaseModel):
|
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|
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type: Optional[Type] = None
|
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|
+
authors: List[ExperimentAuthorSchema]
|
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+
"""
|
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|
+
experiment authors
|
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132
|
+
"""
|
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+
title: str
|
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134
|
+
"""
|
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135
|
+
experiment title
|
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136
|
+
"""
|
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137
|
+
method: str
|
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138
|
+
"""
|
|
139
|
+
method used in experiment
|
|
140
|
+
"""
|
|
141
|
+
conditions: List[ConditionSchema]
|
|
142
|
+
location: Optional[LocationSchema] = Field(None, title="location schema")
|
|
143
|
+
timestamp: float
|
|
144
|
+
"""
|
|
145
|
+
epoch time.
|
|
146
|
+
"""
|
|
147
|
+
note: Optional[str] = None
|
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148
|
+
"""
|
|
149
|
+
Note about experiment
|
|
150
|
+
"""
|
|
151
|
+
references: Optional[List[LiteratureReferenceSchema]] = None
|
|
152
|
+
"""
|
|
153
|
+
references to literature articles
|
|
154
|
+
"""
|
|
155
|
+
|
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156
|
+
|
|
157
|
+
class SystemTag(Enum):
|
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158
|
+
isRefined = "isRefined"
|
|
159
|
+
isBest = "isBest"
|
|
160
|
+
|
|
161
|
+
|
|
162
|
+
class SchemaOfBaseMaterialSPreliminaryProperty(BaseModel):
|
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163
|
+
slug: Optional[str] = None
|
|
164
|
+
"""
|
|
165
|
+
property slug, e.g. total_energy
|
|
166
|
+
"""
|
|
167
|
+
group: Optional[str] = None
|
|
168
|
+
"""
|
|
169
|
+
property group, e.g. qe:dft:gga:pbe
|
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170
|
+
"""
|
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171
|
+
data: Dict[str, Any]
|
|
172
|
+
"""
|
|
173
|
+
container of the information, specific to each property
|
|
174
|
+
"""
|
|
175
|
+
source: field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.Field = Field(
|
|
176
|
+
...,
|
|
177
|
+
title="The source of a property. This could be an article, a simulation on Exabyte, an external simulation, etc.",
|
|
178
|
+
)
|
|
179
|
+
exabyteId: Optional[List[str]] = None
|
|
180
|
+
"""
|
|
181
|
+
Id of the corresponding item in the entity bank that this property is obtained for
|
|
182
|
+
"""
|
|
183
|
+
precision: Optional[Dict[str, Any]] = None
|
|
184
|
+
count: Optional[float] = None
|
|
185
|
+
"""
|
|
186
|
+
total number of properties among which this property is the best.
|
|
187
|
+
"""
|
|
188
|
+
systemTags: Optional[List[SystemTag]] = None
|
|
189
|
+
"""
|
|
190
|
+
property system tags, marks property system characteristics, values refined or best (could be both)
|
|
191
|
+
"""
|
|
192
|
+
field_id: Optional[str] = Field(None, alias="_id")
|
|
193
|
+
"""
|
|
194
|
+
entity identity
|
|
195
|
+
"""
|
|
196
|
+
systemName: Optional[str] = None
|
|
197
|
+
schemaVersion: Optional[str] = "2022.8.16"
|
|
198
|
+
"""
|
|
199
|
+
entity's schema version. Used to distinct between different schemas.
|
|
200
|
+
"""
|