mat3ra-esse 2024.4.8.post1__py3-none-any.whl → 2024.4.8.post2__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of mat3ra-esse might be problematic. Click here for more details.

Files changed (447) hide show
  1. mat3ra/esse/models/__init__.py +3 -0
  2. mat3ra/esse/models/core/__init__.py +3 -0
  3. mat3ra/esse/models/core/abstract/2d_data.py +17 -0
  4. mat3ra/esse/models/core/abstract/2d_plot.py +34 -0
  5. mat3ra/esse/models/core/abstract/3d_grid.py +14 -0
  6. mat3ra/esse/models/core/abstract/3d_tensor.py +19 -0
  7. mat3ra/esse/models/core/abstract/3d_vector_basis.py +15 -0
  8. mat3ra/esse/models/core/abstract/__init__.py +3 -0
  9. mat3ra/esse/models/core/abstract/point.py +13 -0
  10. mat3ra/esse/models/core/abstract/vector.py +13 -0
  11. mat3ra/esse/models/core/primitive/1d_data_series.py +13 -0
  12. mat3ra/esse/models/core/primitive/3d_lattice.py +34 -0
  13. mat3ra/esse/models/core/primitive/__init__.py +3 -0
  14. mat3ra/esse/models/core/primitive/array_of_3_booleans.py +13 -0
  15. mat3ra/esse/models/core/primitive/array_of_3_numbers.py +13 -0
  16. mat3ra/esse/models/core/primitive/array_of_ids.py +23 -0
  17. mat3ra/esse/models/core/primitive/array_of_strings.py +16 -0
  18. mat3ra/esse/models/core/primitive/axis.py +20 -0
  19. mat3ra/esse/models/core/primitive/group_info.py +20 -0
  20. mat3ra/esse/models/core/primitive/integer_one_or_zero.py +11 -0
  21. mat3ra/esse/models/core/primitive/linked_list/__init__.py +33 -0
  22. mat3ra/esse/models/core/primitive/linked_list/base_node.py +31 -0
  23. mat3ra/esse/models/core/primitive/linked_list/named_node.py +35 -0
  24. mat3ra/esse/models/core/primitive/linked_list/named_node_in_group.py +43 -0
  25. mat3ra/esse/models/core/primitive/linked_list/node_with_type.py +32 -0
  26. mat3ra/esse/models/core/primitive/scalar.py +11 -0
  27. mat3ra/esse/models/core/primitive/slugified_entry.py +18 -0
  28. mat3ra/esse/models/core/primitive/slugified_entry_or_slug.py +27 -0
  29. mat3ra/esse/models/core/primitive/string.py +11 -0
  30. mat3ra/esse/models/core/reference/__init__.py +260 -0
  31. mat3ra/esse/models/core/reference/exabyte.py +24 -0
  32. mat3ra/esse/models/core/reference/experiment/__init__.py +150 -0
  33. mat3ra/esse/models/core/reference/experiment/condition.py +28 -0
  34. mat3ra/esse/models/core/reference/experiment/location.py +18 -0
  35. mat3ra/esse/models/core/reference/literature/__init__.py +86 -0
  36. mat3ra/esse/models/core/reference/literature/name.py +16 -0
  37. mat3ra/esse/models/core/reference/literature/pages.py +14 -0
  38. mat3ra/esse/models/core/reference/modeling/__init__.py +49 -0
  39. mat3ra/esse/models/core/reference/modeling/exabyte.py +42 -0
  40. mat3ra/esse/models/core/reusable/__init__.py +3 -0
  41. mat3ra/esse/models/core/reusable/atomic_data/__init__.py +3 -0
  42. mat3ra/esse/models/core/reusable/atomic_data/per_orbital.py +21 -0
  43. mat3ra/esse/models/core/reusable/atomic_data/per_orbital_pair.py +34 -0
  44. mat3ra/esse/models/core/reusable/atomic_data/value_number.py +16 -0
  45. mat3ra/esse/models/core/reusable/atomic_data/value_string.py +16 -0
  46. mat3ra/esse/models/core/reusable/atomic_data_per_orbital_numeric.py +25 -0
  47. mat3ra/esse/models/core/reusable/atomic_data_per_orbital_pair_numeric.py +38 -0
  48. mat3ra/esse/models/core/reusable/atomic_orbital.py +20 -0
  49. mat3ra/esse/models/core/reusable/atomic_scalars.py +28 -0
  50. mat3ra/esse/models/core/reusable/atomic_strings.py +24 -0
  51. mat3ra/esse/models/core/reusable/atomic_vectors.py +24 -0
  52. mat3ra/esse/models/core/reusable/band_gap.py +42 -0
  53. mat3ra/esse/models/core/reusable/categories.py +43 -0
  54. mat3ra/esse/models/core/reusable/category_path.py +14 -0
  55. mat3ra/esse/models/core/reusable/dielectric_tensor_component.py +31 -0
  56. mat3ra/esse/models/core/reusable/energy.py +30 -0
  57. mat3ra/esse/models/core/reusable/file_metadata.py +24 -0
  58. mat3ra/esse/models/core/reusable/frequency_function_matrix.py +20 -0
  59. mat3ra/esse/models/core/reusable/object_storage_container_data.py +36 -0
  60. mat3ra/esse/models/definitions/__init__.py +3 -0
  61. mat3ra/esse/models/definitions/units.py +13 -0
  62. mat3ra/esse/models/element.py +74 -0
  63. mat3ra/esse/models/in_memory_entity/__init__.py +3 -0
  64. mat3ra/esse/models/in_memory_entity/base.py +58 -0
  65. mat3ra/esse/models/in_memory_entity/defaultable.py +62 -0
  66. mat3ra/esse/models/in_memory_entity/named.py +62 -0
  67. mat3ra/esse/models/in_memory_entity/named_defaultable.py +66 -0
  68. mat3ra/esse/models/in_memory_entity/named_defaultable_has_metadata.py +67 -0
  69. mat3ra/esse/models/in_memory_entity/named_defaultable_runtime_items.py +89 -0
  70. mat3ra/esse/models/job/__init__.py +3006 -0
  71. mat3ra/esse/models/job/base.py +287 -0
  72. mat3ra/esse/models/job/compute.py +161 -0
  73. mat3ra/esse/models/material/__init__.py +420 -0
  74. mat3ra/esse/models/material/conventional.py +13 -0
  75. mat3ra/esse/models/method/__init__.py +28 -0
  76. mat3ra/esse/models/method/categorized_method.py +86 -0
  77. mat3ra/esse/models/method/method_parameters.py +48 -0
  78. mat3ra/esse/models/method/unit_method.py +70 -0
  79. mat3ra/esse/models/methods_category/mathematical/__init__.py +3 -0
  80. mat3ra/esse/models/methods_category/mathematical/diff/__init__.py +48 -0
  81. mat3ra/esse/models/methods_category/mathematical/diff/enum_options.py +13 -0
  82. mat3ra/esse/models/methods_category/mathematical/diff/fd.py +52 -0
  83. mat3ra/esse/models/methods_category/mathematical/discr/__init__.py +48 -0
  84. mat3ra/esse/models/methods_category/mathematical/discr/enum_options.py +13 -0
  85. mat3ra/esse/models/methods_category/mathematical/discr/mesh/__init__.py +52 -0
  86. mat3ra/esse/models/methods_category/mathematical/discr/mesh/enum_options.py +13 -0
  87. mat3ra/esse/models/methods_category/mathematical/discr/mesh/hybrid.py +56 -0
  88. mat3ra/esse/models/methods_category/mathematical/discr/mesh/nstruct.py +56 -0
  89. mat3ra/esse/models/methods_category/mathematical/discr/mesh/struct/__init__.py +56 -0
  90. mat3ra/esse/models/methods_category/mathematical/discr/mesh/struct/cartesian.py +60 -0
  91. mat3ra/esse/models/methods_category/mathematical/discr/mesh/struct/enum_options.py +13 -0
  92. mat3ra/esse/models/methods_category/mathematical/enum_options.py +13 -0
  93. mat3ra/esse/models/methods_category/mathematical/fapprx/__init__.py +48 -0
  94. mat3ra/esse/models/methods_category/mathematical/fapprx/basisexp.py +52 -0
  95. mat3ra/esse/models/methods_category/mathematical/fapprx/enum_options.py +13 -0
  96. mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/__init__.py +52 -0
  97. mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/enum_options.py +13 -0
  98. mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/lin.py +56 -0
  99. mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/poly.py +56 -0
  100. mat3ra/esse/models/methods_category/mathematical/fapprx/ipol/spline.py +56 -0
  101. mat3ra/esse/models/methods_category/mathematical/intgr/__init__.py +48 -0
  102. mat3ra/esse/models/methods_category/mathematical/intgr/analytic/__init__.py +52 -0
  103. mat3ra/esse/models/methods_category/mathematical/intgr/analytic/enum_options.py +13 -0
  104. mat3ra/esse/models/methods_category/mathematical/intgr/analytic/volume.py +67 -0
  105. mat3ra/esse/models/methods_category/mathematical/intgr/diffeq/__init__.py +52 -0
  106. mat3ra/esse/models/methods_category/mathematical/intgr/diffeq/enum_options.py +13 -0
  107. mat3ra/esse/models/methods_category/mathematical/intgr/diffeq/order1.py +56 -0
  108. mat3ra/esse/models/methods_category/mathematical/intgr/diffeq/order2.py +56 -0
  109. mat3ra/esse/models/methods_category/mathematical/intgr/enum_options.py +13 -0
  110. mat3ra/esse/models/methods_category/mathematical/intgr/numquad/__init__.py +52 -0
  111. mat3ra/esse/models/methods_category/mathematical/intgr/numquad/enum_options.py +13 -0
  112. mat3ra/esse/models/methods_category/mathematical/intgr/numquad/gauss.py +56 -0
  113. mat3ra/esse/models/methods_category/mathematical/intgr/numquad/newcot.py +56 -0
  114. mat3ra/esse/models/methods_category/mathematical/intgr/transf/__init__.py +52 -0
  115. mat3ra/esse/models/methods_category/mathematical/intgr/transf/enum_options.py +13 -0
  116. mat3ra/esse/models/methods_category/mathematical/intgr/transf/fourier.py +56 -0
  117. mat3ra/esse/models/methods_category/mathematical/linalg/__init__.py +48 -0
  118. mat3ra/esse/models/methods_category/mathematical/linalg/dcomp.py +52 -0
  119. mat3ra/esse/models/methods_category/mathematical/linalg/diag/__init__.py +52 -0
  120. mat3ra/esse/models/methods_category/mathematical/linalg/diag/davidson.py +56 -0
  121. mat3ra/esse/models/methods_category/mathematical/linalg/diag/enum_options.py +13 -0
  122. mat3ra/esse/models/methods_category/mathematical/linalg/enum_options.py +13 -0
  123. mat3ra/esse/models/methods_category/mathematical/linalg/lintra.py +52 -0
  124. mat3ra/esse/models/methods_category/mathematical/linalg/matf.py +52 -0
  125. mat3ra/esse/models/methods_category/mathematical/opt/__init__.py +48 -0
  126. mat3ra/esse/models/methods_category/mathematical/opt/diff/__init__.py +52 -0
  127. mat3ra/esse/models/methods_category/mathematical/opt/diff/bracket.py +56 -0
  128. mat3ra/esse/models/methods_category/mathematical/opt/diff/enum_options.py +13 -0
  129. mat3ra/esse/models/methods_category/mathematical/opt/diff/local.py +56 -0
  130. mat3ra/esse/models/methods_category/mathematical/opt/diff/order1.py +56 -0
  131. mat3ra/esse/models/methods_category/mathematical/opt/diff/order2.py +56 -0
  132. mat3ra/esse/models/methods_category/mathematical/opt/diff/ordern/__init__.py +56 -0
  133. mat3ra/esse/models/methods_category/mathematical/opt/diff/ordern/cg.py +60 -0
  134. mat3ra/esse/models/methods_category/mathematical/opt/diff/ordern/enum_options.py +13 -0
  135. mat3ra/esse/models/methods_category/mathematical/opt/enum_options.py +13 -0
  136. mat3ra/esse/models/methods_category/mathematical/opt/ndiff/__init__.py +52 -0
  137. mat3ra/esse/models/methods_category/mathematical/opt/ndiff/direct.py +56 -0
  138. mat3ra/esse/models/methods_category/mathematical/opt/ndiff/enum_options.py +13 -0
  139. mat3ra/esse/models/methods_category/mathematical/opt/ndiff/pop.py +56 -0
  140. mat3ra/esse/models/methods_category/mathematical/opt/ndiff/stoch.py +56 -0
  141. mat3ra/esse/models/methods_category/mathematical/opt/root/__init__.py +52 -0
  142. mat3ra/esse/models/methods_category/mathematical/opt/root/bracket.py +56 -0
  143. mat3ra/esse/models/methods_category/mathematical/opt/root/enum_options.py +13 -0
  144. mat3ra/esse/models/methods_category/mathematical/opt/root/iter.py +56 -0
  145. mat3ra/esse/models/methods_category/mathematical/regression.py +54 -0
  146. mat3ra/esse/models/methods_category/physical/__init__.py +3 -0
  147. mat3ra/esse/models/methods_category/physical/enum_options.py +13 -0
  148. mat3ra/esse/models/methods_category/physical/qm/__init__.py +48 -0
  149. mat3ra/esse/models/methods_category/physical/qm/enum_options.py +13 -0
  150. mat3ra/esse/models/methods_category/physical/qm/wf/__init__.py +52 -0
  151. mat3ra/esse/models/methods_category/physical/qm/wf/ao/__init__.py +62 -0
  152. mat3ra/esse/models/methods_category/physical/qm/wf/ao/dunning.py +60 -0
  153. mat3ra/esse/models/methods_category/physical/qm/wf/ao/other.py +60 -0
  154. mat3ra/esse/models/methods_category/physical/qm/wf/ao/pople.py +60 -0
  155. mat3ra/esse/models/methods_category/physical/qm/wf/enum_options.py +13 -0
  156. mat3ra/esse/models/methods_category/physical/qm/wf/psp.py +63 -0
  157. mat3ra/esse/models/methods_category/physical/qm/wf/pw.py +56 -0
  158. mat3ra/esse/models/methods_category/physical/qm/wf/smearing.py +63 -0
  159. mat3ra/esse/models/methods_category/physical/qm/wf/tetrahedron.py +62 -0
  160. mat3ra/esse/models/methods_directory/legacy/__init__.py +3 -0
  161. mat3ra/esse/models/methods_directory/legacy/localorbital.py +37 -0
  162. mat3ra/esse/models/methods_directory/legacy/pseudopotential.py +40 -0
  163. mat3ra/esse/models/methods_directory/legacy/regression.py +118 -0
  164. mat3ra/esse/models/methods_directory/legacy/unknown.py +37 -0
  165. mat3ra/esse/models/methods_directory/mathematical/__init__.py +3 -0
  166. mat3ra/esse/models/methods_directory/mathematical/cg.py +87 -0
  167. mat3ra/esse/models/methods_directory/mathematical/davidson.py +83 -0
  168. mat3ra/esse/models/methods_directory/mathematical/regression/__init__.py +161 -0
  169. mat3ra/esse/models/methods_directory/mathematical/regression/data.py +69 -0
  170. mat3ra/esse/models/methods_directory/mathematical/regression/dataset.py +20 -0
  171. mat3ra/esse/models/methods_directory/mathematical/regression/kernel_ridge/__init__.py +3 -0
  172. mat3ra/esse/models/methods_directory/mathematical/regression/kernel_ridge/data_per_property.py +39 -0
  173. mat3ra/esse/models/methods_directory/mathematical/regression/linear/__init__.py +3 -0
  174. mat3ra/esse/models/methods_directory/mathematical/regression/linear/data_per_property.py +35 -0
  175. mat3ra/esse/models/methods_directory/mathematical/regression/per_feature_item.py +24 -0
  176. mat3ra/esse/models/methods_directory/mathematical/regression/precision.py +28 -0
  177. mat3ra/esse/models/methods_directory/mathematical/regression/precision_per_property.py +24 -0
  178. mat3ra/esse/models/methods_directory/physical/__init__.py +3 -0
  179. mat3ra/esse/models/methods_directory/physical/ao/__init__.py +3 -0
  180. mat3ra/esse/models/methods_directory/physical/ao/dunning.py +103 -0
  181. mat3ra/esse/models/methods_directory/physical/ao/enum_options.py +13 -0
  182. mat3ra/esse/models/methods_directory/physical/ao/other.py +107 -0
  183. mat3ra/esse/models/methods_directory/physical/ao/pople.py +101 -0
  184. mat3ra/esse/models/methods_directory/physical/psp/__init__.py +187 -0
  185. mat3ra/esse/models/methods_directory/physical/psp/file.py +106 -0
  186. mat3ra/esse/models/methods_directory/physical/psp/file_data_item.py +88 -0
  187. mat3ra/esse/models/methods_directory/physical/pw.py +83 -0
  188. mat3ra/esse/models/methods_directory/physical/smearing.py +90 -0
  189. mat3ra/esse/models/methods_directory/physical/tetrahedron.py +91 -0
  190. mat3ra/esse/models/model/__init__.py +43 -0
  191. mat3ra/esse/models/model/categorized_model.py +211 -0
  192. mat3ra/esse/models/model/mixins/__init__.py +3 -0
  193. mat3ra/esse/models/model/mixins/dft/__init__.py +5 -0
  194. mat3ra/esse/models/model/mixins/dft/double_hybrid_functional.py +18 -0
  195. mat3ra/esse/models/model/mixins/dft/enum_options.py +13 -0
  196. mat3ra/esse/models/model/mixins/dft/gga_functional.py +22 -0
  197. mat3ra/esse/models/model/mixins/dft/hybrid_functional.py +19 -0
  198. mat3ra/esse/models/model/mixins/dft/lda_functional.py +21 -0
  199. mat3ra/esse/models/model/mixins/dft/mgga_functional.py +21 -0
  200. mat3ra/esse/models/model/mixins/dispersion_correction.py +21 -0
  201. mat3ra/esse/models/model/mixins/enum_options.py +13 -0
  202. mat3ra/esse/models/model/mixins/hubbard.py +18 -0
  203. mat3ra/esse/models/model/mixins/spin_orbit_coupling.py +16 -0
  204. mat3ra/esse/models/model/mixins/spin_polarization.py +22 -0
  205. mat3ra/esse/models/model/model_parameters.py +123 -0
  206. mat3ra/esse/models/model/model_without_method.py +144 -0
  207. mat3ra/esse/models/models_category/__init__.py +3 -0
  208. mat3ra/esse/models/models_category/enum_options.py +13 -0
  209. mat3ra/esse/models/models_category/pb/__init__.py +48 -0
  210. mat3ra/esse/models/models_category/pb/enum_options.py +13 -0
  211. mat3ra/esse/models/models_category/pb/qm/__init__.py +52 -0
  212. mat3ra/esse/models/models_category/pb/qm/abin/__init__.py +56 -0
  213. mat3ra/esse/models/models_category/pb/qm/abin/enum_options.py +13 -0
  214. mat3ra/esse/models/models_category/pb/qm/abin/gw.py +66 -0
  215. mat3ra/esse/models/models_category/pb/qm/dft/__init__.py +56 -0
  216. mat3ra/esse/models/models_category/pb/qm/dft/enum_options.py +13 -0
  217. mat3ra/esse/models/models_category/pb/qm/dft/ksdft/__init__.py +60 -0
  218. mat3ra/esse/models/models_category/pb/qm/dft/ksdft/double_hybrid.py +64 -0
  219. mat3ra/esse/models/models_category/pb/qm/dft/ksdft/enum_options.py +13 -0
  220. mat3ra/esse/models/models_category/pb/qm/dft/ksdft/gga.py +64 -0
  221. mat3ra/esse/models/models_category/pb/qm/dft/ksdft/hybrid.py +64 -0
  222. mat3ra/esse/models/models_category/pb/qm/dft/ksdft/lda.py +64 -0
  223. mat3ra/esse/models/models_category/pb/qm/dft/ksdft/mgga.py +64 -0
  224. mat3ra/esse/models/models_category/pb/qm/enum_options.py +13 -0
  225. mat3ra/esse/models/models_category/pb/qm/semp.py +56 -0
  226. mat3ra/esse/models/models_category/st/__init__.py +48 -0
  227. mat3ra/esse/models/models_category/st/det/__init__.py +52 -0
  228. mat3ra/esse/models/models_category/st/det/enum_options.py +13 -0
  229. mat3ra/esse/models/models_category/st/det/ml/__init__.py +56 -0
  230. mat3ra/esse/models/models_category/st/det/ml/enum_options.py +13 -0
  231. mat3ra/esse/models/models_category/st/det/ml/re.py +60 -0
  232. mat3ra/esse/models/models_category/st/enum_options.py +13 -0
  233. mat3ra/esse/models/models_directory/__init__.py +3 -0
  234. mat3ra/esse/models/models_directory/double_hybrid.py +205 -0
  235. mat3ra/esse/models/models_directory/gga.py +219 -0
  236. mat3ra/esse/models/models_directory/gw.py +272 -0
  237. mat3ra/esse/models/models_directory/hybrid.py +213 -0
  238. mat3ra/esse/models/models_directory/lda.py +218 -0
  239. mat3ra/esse/models/models_directory/legacy/__init__.py +3 -0
  240. mat3ra/esse/models/models_directory/legacy/dft.py +170 -0
  241. mat3ra/esse/models/models_directory/legacy/ml.py +52 -0
  242. mat3ra/esse/models/models_directory/legacy/unknown.py +52 -0
  243. mat3ra/esse/models/models_directory/mgga.py +218 -0
  244. mat3ra/esse/models/models_directory/re.py +160 -0
  245. mat3ra/esse/models/project.py +82 -0
  246. mat3ra/esse/models/properties_directory/__init__.py +3 -0
  247. mat3ra/esse/models/properties_directory/derived_properties.py +140 -0
  248. mat3ra/esse/models/properties_directory/electronic_configuration.py +20 -0
  249. mat3ra/esse/models/properties_directory/elemental/__init__.py +3 -0
  250. mat3ra/esse/models/properties_directory/elemental/atomic_radius.py +34 -0
  251. mat3ra/esse/models/properties_directory/elemental/electronegativity.py +19 -0
  252. mat3ra/esse/models/properties_directory/elemental/ionization_potential.py +30 -0
  253. mat3ra/esse/models/properties_directory/non_scalar/__init__.py +3 -0
  254. mat3ra/esse/models/properties_directory/non_scalar/average_potential_profile.py +83 -0
  255. mat3ra/esse/models/properties_directory/non_scalar/band_gaps.py +64 -0
  256. mat3ra/esse/models/properties_directory/non_scalar/band_structure.py +92 -0
  257. mat3ra/esse/models/properties_directory/non_scalar/charge_density_profile.py +63 -0
  258. mat3ra/esse/models/properties_directory/non_scalar/density_of_states.py +97 -0
  259. mat3ra/esse/models/properties_directory/non_scalar/dielectric_tensor.py +40 -0
  260. mat3ra/esse/models/properties_directory/non_scalar/file_content.py +64 -0
  261. mat3ra/esse/models/properties_directory/non_scalar/hubbard_u.py +40 -0
  262. mat3ra/esse/models/properties_directory/non_scalar/hubbard_v.py +54 -0
  263. mat3ra/esse/models/properties_directory/non_scalar/hubbard_v_nn.py +54 -0
  264. mat3ra/esse/models/properties_directory/non_scalar/phonon_dispersions.py +79 -0
  265. mat3ra/esse/models/properties_directory/non_scalar/phonon_dos.py +71 -0
  266. mat3ra/esse/models/properties_directory/non_scalar/potential_profile.py +69 -0
  267. mat3ra/esse/models/properties_directory/non_scalar/reaction_energy_profile.py +69 -0
  268. mat3ra/esse/models/properties_directory/non_scalar/stress_tensor.py +31 -0
  269. mat3ra/esse/models/properties_directory/non_scalar/total_energy_contributions.py +198 -0
  270. mat3ra/esse/models/properties_directory/non_scalar/vibrational_spectrum.py +75 -0
  271. mat3ra/esse/models/properties_directory/scalar/__init__.py +3 -0
  272. mat3ra/esse/models/properties_directory/scalar/electron_affinity.py +34 -0
  273. mat3ra/esse/models/properties_directory/scalar/fermi_energy.py +34 -0
  274. mat3ra/esse/models/properties_directory/scalar/formation_energy.py +34 -0
  275. mat3ra/esse/models/properties_directory/scalar/ionization_potential.py +34 -0
  276. mat3ra/esse/models/properties_directory/scalar/pressure.py +25 -0
  277. mat3ra/esse/models/properties_directory/scalar/reaction_energy_barrier.py +34 -0
  278. mat3ra/esse/models/properties_directory/scalar/surface_energy.py +34 -0
  279. mat3ra/esse/models/properties_directory/scalar/total_energy.py +34 -0
  280. mat3ra/esse/models/properties_directory/scalar/total_force.py +29 -0
  281. mat3ra/esse/models/properties_directory/scalar/valence_band_offset.py +34 -0
  282. mat3ra/esse/models/properties_directory/scalar/zero_point_energy.py +34 -0
  283. mat3ra/esse/models/properties_directory/structural/__init__.py +3 -0
  284. mat3ra/esse/models/properties_directory/structural/atomic_forces.py +40 -0
  285. mat3ra/esse/models/properties_directory/structural/basis/__init__.py +68 -0
  286. mat3ra/esse/models/properties_directory/structural/basis/atomic_constraints.py +30 -0
  287. mat3ra/esse/models/properties_directory/structural/basis/atomic_coordinate.py +14 -0
  288. mat3ra/esse/models/properties_directory/structural/basis/atomic_coordinates.py +39 -0
  289. mat3ra/esse/models/properties_directory/structural/basis/atomic_element.py +19 -0
  290. mat3ra/esse/models/properties_directory/structural/basis/bonds.py +40 -0
  291. mat3ra/esse/models/properties_directory/structural/density.py +24 -0
  292. mat3ra/esse/models/properties_directory/structural/elemental_ratio.py +23 -0
  293. mat3ra/esse/models/properties_directory/structural/inchi.py +19 -0
  294. mat3ra/esse/models/properties_directory/structural/inchi_key.py +19 -0
  295. mat3ra/esse/models/properties_directory/structural/lattice/__init__.py +102 -0
  296. mat3ra/esse/models/properties_directory/structural/lattice/lattice_bravais.py +71 -0
  297. mat3ra/esse/models/properties_directory/structural/lattice/lattice_vectors.py +35 -0
  298. mat3ra/esse/models/properties_directory/structural/lattice/type_enum.py +24 -0
  299. mat3ra/esse/models/properties_directory/structural/lattice/type_extended_enum.py +34 -0
  300. mat3ra/esse/models/properties_directory/structural/magnetic_moments.py +35 -0
  301. mat3ra/esse/models/properties_directory/structural/molecular_pattern.py +70 -0
  302. mat3ra/esse/models/properties_directory/structural/p_norm.py +23 -0
  303. mat3ra/esse/models/properties_directory/structural/patterns/__init__.py +3 -0
  304. mat3ra/esse/models/properties_directory/structural/patterns/functional_group.py +37 -0
  305. mat3ra/esse/models/properties_directory/structural/patterns/ring.py +34 -0
  306. mat3ra/esse/models/properties_directory/structural/patterns/special_bond.py +33 -0
  307. mat3ra/esse/models/properties_directory/structural/symmetry.py +39 -0
  308. mat3ra/esse/models/properties_directory/structural/volume.py +24 -0
  309. mat3ra/esse/models/properties_directory/workflow/convergence/__init__.py +3 -0
  310. mat3ra/esse/models/properties_directory/workflow/convergence/electronic.py +26 -0
  311. mat3ra/esse/models/properties_directory/workflow/convergence/ionic.py +63 -0
  312. mat3ra/esse/models/properties_directory/workflow/convergence/kpoint.py +43 -0
  313. mat3ra/esse/models/property/__init__.py +3 -0
  314. mat3ra/esse/models/property/base/The_source_of_a_property/__init__.py +5 -0
  315. mat3ra/esse/models/property/base/The_source_of_a_property/field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.py +38 -0
  316. mat3ra/esse/models/property/base/__init__.py +232 -0
  317. mat3ra/esse/models/property/meta/The_source_of_a_property/__init__.py +5 -0
  318. mat3ra/esse/models/property/meta/The_source_of_a_property/field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.py +38 -0
  319. mat3ra/esse/models/property/meta/__init__.py +232 -0
  320. mat3ra/esse/models/property/raw/The_source_of_a_property/__init__.py +5 -0
  321. mat3ra/esse/models/property/raw/The_source_of_a_property/field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.py +38 -0
  322. mat3ra/esse/models/property/raw/__init__.py +232 -0
  323. mat3ra/esse/models/property/source/The_source_of_a_property/__init__.py +5 -0
  324. mat3ra/esse/models/property/source/The_source_of_a_property/field_This_could_be_an_article__a_simulation_on_Exabyte__an_external_simulation__etc.py +38 -0
  325. mat3ra/esse/models/property/source/__init__.py +150 -0
  326. mat3ra/esse/models/software/__init__.py +3 -0
  327. mat3ra/esse/models/software/application.py +93 -0
  328. mat3ra/esse/models/software/executable.py +97 -0
  329. mat3ra/esse/models/software/flavor.py +116 -0
  330. mat3ra/esse/models/software/template.py +77 -0
  331. mat3ra/esse/models/software_directory/ml/__init__.py +3 -0
  332. mat3ra/esse/models/software_directory/ml/exabyteml.py +28 -0
  333. mat3ra/esse/models/software_directory/ml/unit/__init__.py +3 -0
  334. mat3ra/esse/models/software_directory/ml/unit/execution/__init__.py +1348 -0
  335. mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/__init__.py +5 -0
  336. mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/cross_validate.py +381 -0
  337. mat3ra/esse/models/software_directory/ml/unit/execution/initialize.py +381 -0
  338. mat3ra/esse/models/software_directory/ml/unit/execution/score.py +374 -0
  339. mat3ra/esse/models/software_directory/ml/unit/execution/train.py +385 -0
  340. mat3ra/esse/models/software_directory/ml/unit/processing/__init__.py +328 -0
  341. mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/__init__.py +199 -0
  342. mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/manipulation.py +176 -0
  343. mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.py +195 -0
  344. mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/__init__.py +180 -0
  345. mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/filter_based.py +176 -0
  346. mat3ra/esse/models/software_directory/modeling/__init__.py +3 -0
  347. mat3ra/esse/models/software_directory/modeling/deepmd.py +112 -0
  348. mat3ra/esse/models/software_directory/modeling/espresso/__init__.py +39 -0
  349. mat3ra/esse/models/software_directory/modeling/espresso/arguments.py +35 -0
  350. mat3ra/esse/models/software_directory/modeling/nwchem.py +113 -0
  351. mat3ra/esse/models/software_directory/modeling/unit/__init__.py +3 -0
  352. mat3ra/esse/models/software_directory/modeling/unit/execution.py +390 -0
  353. mat3ra/esse/models/software_directory/modeling/vasp.py +117 -0
  354. mat3ra/esse/models/software_directory/scripting/__init__.py +3 -0
  355. mat3ra/esse/models/software_directory/scripting/jupyter_lab.py +115 -0
  356. mat3ra/esse/models/software_directory/scripting/python.py +129 -0
  357. mat3ra/esse/models/software_directory/scripting/shell.py +129 -0
  358. mat3ra/esse/models/software_directory/scripting/unit/__init__.py +3 -0
  359. mat3ra/esse/models/software_directory/scripting/unit/execution.py +390 -0
  360. mat3ra/esse/models/system/__init__.py +3 -0
  361. mat3ra/esse/models/system/_material.py +29 -0
  362. mat3ra/esse/models/system/_parent_job.py +29 -0
  363. mat3ra/esse/models/system/_project.py +29 -0
  364. mat3ra/esse/models/system/bankable.py +20 -0
  365. mat3ra/esse/models/system/consistency_check.py +40 -0
  366. mat3ra/esse/models/system/creator.py +29 -0
  367. mat3ra/esse/models/system/creator_account.py +28 -0
  368. mat3ra/esse/models/system/database_source.py +36 -0
  369. mat3ra/esse/models/system/defaultable.py +16 -0
  370. mat3ra/esse/models/system/description.py +17 -0
  371. mat3ra/esse/models/system/entity_reference.py +24 -0
  372. mat3ra/esse/models/system/file_source.py +28 -0
  373. mat3ra/esse/models/system/history.py +18 -0
  374. mat3ra/esse/models/system/iframe_message.py +36 -0
  375. mat3ra/esse/models/system/in_set.py +30 -0
  376. mat3ra/esse/models/system/is_multi_material.py +13 -0
  377. mat3ra/esse/models/system/is_outdated.py +13 -0
  378. mat3ra/esse/models/system/job_extended.py +36 -0
  379. mat3ra/esse/models/system/message.py +59 -0
  380. mat3ra/esse/models/system/metadata.py +13 -0
  381. mat3ra/esse/models/system/name.py +16 -0
  382. mat3ra/esse/models/system/owner.py +29 -0
  383. mat3ra/esse/models/system/path.py +16 -0
  384. mat3ra/esse/models/system/path_entity.py +20 -0
  385. mat3ra/esse/models/system/schema_version.py +16 -0
  386. mat3ra/esse/models/system/scope.py +13 -0
  387. mat3ra/esse/models/system/set.py +15 -0
  388. mat3ra/esse/models/system/sharing.py +13 -0
  389. mat3ra/esse/models/system/soft_removable.py +20 -0
  390. mat3ra/esse/models/system/status.py +20 -0
  391. mat3ra/esse/models/system/tags.py +16 -0
  392. mat3ra/esse/models/system/timestampable.py +22 -0
  393. mat3ra/esse/models/system/use_values.py +13 -0
  394. mat3ra/esse/models/third_party/db/nist_jarvis/2024.3.13/__init__.py +3 -0
  395. mat3ra/esse/models/third_party/db/nist_jarvis/2024.3.13/atoms.py +41 -0
  396. mat3ra/esse/models/third_party/db/nist_jarvis/2024.3.13/db_entry.py +55 -0
  397. mat3ra/esse/models/third_party/file/applications/espresso/7.2/__init__.py +3 -0
  398. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/__init__.py +1990 -0
  399. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/atomic_positions.py +51 -0
  400. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/atomic_species.py +34 -0
  401. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/cell.py +111 -0
  402. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/cell_parameters.py +36 -0
  403. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/control.py +169 -0
  404. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/electrons.py +139 -0
  405. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/hubbard.py +194 -0
  406. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/ions.py +422 -0
  407. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/k_points.py +73 -0
  408. mat3ra/esse/models/third_party/file/applications/espresso/7.2/pw.x/system.py +841 -0
  409. mat3ra/esse/models/workflow/__init__.py +2817 -0
  410. mat3ra/esse/models/workflow/base.py +79 -0
  411. mat3ra/esse/models/workflow/base_flow.py +180 -0
  412. mat3ra/esse/models/workflow/scope.py +14 -0
  413. mat3ra/esse/models/workflow/subworkflow/__init__.py +1472 -0
  414. mat3ra/esse/models/workflow/subworkflow/unit.py +1187 -0
  415. mat3ra/esse/models/workflow/unit/__init__.py +1415 -0
  416. mat3ra/esse/models/workflow/unit/assertion.py +149 -0
  417. mat3ra/esse/models/workflow/unit/assignment.py +165 -0
  418. mat3ra/esse/models/workflow/unit/base.py +137 -0
  419. mat3ra/esse/models/workflow/unit/condition.py +176 -0
  420. mat3ra/esse/models/workflow/unit/execution.py +374 -0
  421. mat3ra/esse/models/workflow/unit/input/__init__.py +3 -0
  422. mat3ra/esse/models/workflow/unit/input/_input.py +43 -0
  423. mat3ra/esse/models/workflow/unit/input/_inputItem.py +18 -0
  424. mat3ra/esse/models/workflow/unit/input/_inputItemId.py +21 -0
  425. mat3ra/esse/models/workflow/unit/input/_inputItemScope.py +18 -0
  426. mat3ra/esse/models/workflow/unit/input/_map_input/__init__.py +17 -0
  427. mat3ra/esse/models/workflow/unit/input/_map_input/values.py +13 -0
  428. mat3ra/esse/models/workflow/unit/io/__init__.py +254 -0
  429. mat3ra/esse/models/workflow/unit/io/api.py +27 -0
  430. mat3ra/esse/models/workflow/unit/io/db.py +39 -0
  431. mat3ra/esse/models/workflow/unit/io/object_storage.py +59 -0
  432. mat3ra/esse/models/workflow/unit/map.py +169 -0
  433. mat3ra/esse/models/workflow/unit/processing.py +153 -0
  434. mat3ra/esse/models/workflow/unit/reduce.py +160 -0
  435. mat3ra/esse/models/workflow/unit/runtime/__init__.py +3 -0
  436. mat3ra/esse/models/workflow/unit/runtime/_runtime_item_full_object.py +14 -0
  437. mat3ra/esse/models/workflow/unit/runtime/_runtime_item_name_object.py +14 -0
  438. mat3ra/esse/models/workflow/unit/runtime/_runtime_item_string.py +14 -0
  439. mat3ra/esse/models/workflow/unit/runtime/runtime_item.py +20 -0
  440. mat3ra/esse/models/workflow/unit/runtime/runtime_items.py +35 -0
  441. mat3ra/esse/models/workflow/unit/subworkflow.py +141 -0
  442. {mat3ra_esse-2024.4.8.post1.dist-info → mat3ra_esse-2024.4.8.post2.dist-info}/METADATA +1 -1
  443. mat3ra_esse-2024.4.8.post2.dist-info/RECORD +453 -0
  444. mat3ra_esse-2024.4.8.post1.dist-info/RECORD +0 -12
  445. {mat3ra_esse-2024.4.8.post1.dist-info → mat3ra_esse-2024.4.8.post2.dist-info}/LICENSE.md +0 -0
  446. {mat3ra_esse-2024.4.8.post1.dist-info → mat3ra_esse-2024.4.8.post2.dist-info}/WHEEL +0 -0
  447. {mat3ra_esse-2024.4.8.post1.dist-info → mat3ra_esse-2024.4.8.post2.dist-info}/top_level.txt +0 -0
@@ -0,0 +1,30 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/elemental/ionization_potential.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import Optional
9
+
10
+ from pydantic import BaseModel
11
+
12
+
13
+ class Name(Enum):
14
+ ionization_potential = "ionization_potential"
15
+
16
+
17
+ class Units(Enum):
18
+ kJ_mol = "kJ/mol"
19
+ eV = "eV"
20
+ J_mol = "J/mol"
21
+ hartree = "hartree"
22
+ cm_1 = "cm-1"
23
+ rydberg = "rydberg"
24
+ eV_atom = "eV/atom"
25
+
26
+
27
+ class IonizationPotential(BaseModel):
28
+ name: Optional[Name] = None
29
+ units: Optional[Units] = None
30
+ value: float
@@ -0,0 +1,3 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: schema
3
+ # version: 0.25.5
@@ -0,0 +1,83 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/average_potential_profile.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional, Union
9
+
10
+ from pydantic import BaseModel, Field
11
+
12
+
13
+ class Label(Enum):
14
+ z_coordinate = "z coordinate"
15
+
16
+
17
+ class Units(Enum):
18
+ km = "km"
19
+ m = "m"
20
+ pm = "pm"
21
+ nm = "nm"
22
+ angstrom = "angstrom"
23
+ a_u_ = "a.u."
24
+ bohr = "bohr"
25
+ fractional = "fractional"
26
+ crystal = "crystal"
27
+ cartesian = "cartesian"
28
+ alat = "alat"
29
+
30
+
31
+ class AxisSchema(BaseModel):
32
+ label: Label
33
+ """
34
+ label of an axis object
35
+ """
36
+ units: Optional[Units] = None
37
+ """
38
+ units for an axis
39
+ """
40
+
41
+
42
+ class Label1(Enum):
43
+ energy = "energy"
44
+
45
+
46
+ class Units4(Enum):
47
+ kJ_mol = "kJ/mol"
48
+ eV = "eV"
49
+ J_mol = "J/mol"
50
+ hartree = "hartree"
51
+ cm_1 = "cm-1"
52
+ rydberg = "rydberg"
53
+ eV_atom = "eV/atom"
54
+
55
+
56
+ class AxisSchema3(BaseModel):
57
+ label: Label1
58
+ """
59
+ label of an axis object
60
+ """
61
+ units: Optional[Units4] = None
62
+ """
63
+ units for an axis
64
+ """
65
+
66
+
67
+ class Name(Enum):
68
+ average_potential_profile = "average_potential_profile"
69
+
70
+
71
+ class AveragePotentialProfileSchema(BaseModel):
72
+ xAxis: AxisSchema = Field(..., title="axis schema")
73
+ yAxis: AxisSchema3 = Field(..., title="axis schema")
74
+ name: Optional[Name] = None
75
+ legend: Optional[List] = Field(None, min_length=1)
76
+ """
77
+ Legend of y Axis data series
78
+ """
79
+ xDataArray: List
80
+ """
81
+ array containing values of x Axis
82
+ """
83
+ yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
@@ -0,0 +1,64 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/band_gaps.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional
9
+
10
+ from pydantic import BaseModel, Field
11
+
12
+
13
+ class Name(Enum):
14
+ band_gaps = "band_gaps"
15
+
16
+
17
+ class Type(Enum):
18
+ direct = "direct"
19
+ indirect = "indirect"
20
+
21
+
22
+ class Units(Enum):
23
+ kJ_mol = "kJ/mol"
24
+ eV = "eV"
25
+ J_mol = "J/mol"
26
+ hartree = "hartree"
27
+ cm_1 = "cm-1"
28
+ rydberg = "rydberg"
29
+ eV_atom = "eV/atom"
30
+
31
+
32
+ class BandGapSchema(BaseModel):
33
+ kpointConduction: Optional[List[float]] = Field(None, max_length=3, min_length=3, title="point schema")
34
+ kpointValence: Optional[List[float]] = Field(None, max_length=3, min_length=3, title="point schema")
35
+ eigenvalueConduction: Optional[float] = None
36
+ """
37
+ eigenvalue at k-point in conduction band
38
+ """
39
+ eigenvalueValence: Optional[float] = None
40
+ """
41
+ eigenvalue at k-point in valence band
42
+ """
43
+ spin: Optional[float] = None
44
+ type: Type
45
+ units: Optional[Units] = None
46
+ value: float
47
+
48
+
49
+ class Eigenvalue1(BaseModel):
50
+ spin: Optional[float] = None
51
+ energies: Optional[List] = None
52
+ occupations: Optional[List] = None
53
+
54
+
55
+ class Eigenvalue(BaseModel):
56
+ kpoint: Optional[List[float]] = Field(None, max_length=3, min_length=3, title="point schema")
57
+ weight: Optional[float] = None
58
+ eigenvalues: Optional[List[Eigenvalue1]] = None
59
+
60
+
61
+ class BandGapsSchema(BaseModel):
62
+ name: Name
63
+ values: Optional[List[BandGapSchema]] = None
64
+ eigenvalues: Optional[List[Eigenvalue]] = None
@@ -0,0 +1,92 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/band_structure.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional, Union
9
+
10
+ from pydantic import BaseModel, Field
11
+
12
+
13
+ class Label(Enum):
14
+ kpoints = "kpoints"
15
+
16
+
17
+ class Units(Enum):
18
+ km = "km"
19
+ m = "m"
20
+ pm = "pm"
21
+ nm = "nm"
22
+ angstrom = "angstrom"
23
+ a_u_ = "a.u."
24
+ bohr = "bohr"
25
+ fractional = "fractional"
26
+ crystal = "crystal"
27
+ cartesian = "cartesian"
28
+ alat = "alat"
29
+
30
+
31
+ class AxisSchema(BaseModel):
32
+ label: Label
33
+ """
34
+ label of an axis object
35
+ """
36
+ units: Optional[Units] = None
37
+ """
38
+ units for an axis
39
+ """
40
+
41
+
42
+ class Label3(Enum):
43
+ energy = "energy"
44
+
45
+
46
+ class Units8(Enum):
47
+ kJ_mol = "kJ/mol"
48
+ eV = "eV"
49
+ J_mol = "J/mol"
50
+ hartree = "hartree"
51
+ cm_1 = "cm-1"
52
+ rydberg = "rydberg"
53
+ eV_atom = "eV/atom"
54
+
55
+
56
+ class AxisSchema6(BaseModel):
57
+ label: Label3
58
+ """
59
+ label of an axis object
60
+ """
61
+ units: Optional[Units8] = None
62
+ """
63
+ units for an axis
64
+ """
65
+
66
+
67
+ class Name(Enum):
68
+ band_structure = "band_structure"
69
+
70
+
71
+ class SpinEnum(Enum):
72
+ number_0_5 = 0.5
73
+ number__0_5 = -0.5
74
+
75
+
76
+ class BandStructureSchema(BaseModel):
77
+ xAxis: AxisSchema = Field(..., title="axis schema")
78
+ yAxis: AxisSchema6 = Field(..., title="axis schema")
79
+ name: Optional[Name] = None
80
+ spin: Optional[List[SpinEnum]] = None
81
+ """
82
+ spin of each band
83
+ """
84
+ legend: Optional[List] = Field(None, min_length=1)
85
+ """
86
+ Legend of y Axis data series
87
+ """
88
+ xDataArray: List
89
+ """
90
+ array containing values of x Axis
91
+ """
92
+ yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
@@ -0,0 +1,63 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/charge_density_profile.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional, Union
9
+
10
+ from pydantic import BaseModel, Field
11
+
12
+
13
+ class Label(Enum):
14
+ z_coordinate = "z coordinate"
15
+
16
+
17
+ class AxisSchema(BaseModel):
18
+ label: Label
19
+ """
20
+ label of an axis object
21
+ """
22
+ units: Optional[str] = None
23
+ """
24
+ units for an axis
25
+ """
26
+
27
+
28
+ class Label6(Enum):
29
+ charge_density = "charge density"
30
+
31
+
32
+ class Units(Enum):
33
+ e_A = "e/A"
34
+
35
+
36
+ class AxisSchema8(BaseModel):
37
+ label: Label6
38
+ """
39
+ label of an axis object
40
+ """
41
+ units: Optional[Units] = None
42
+ """
43
+ units for an axis
44
+ """
45
+
46
+
47
+ class Name(Enum):
48
+ charge_density_profile = "charge_density_profile"
49
+
50
+
51
+ class ChargeDensityProfileSchema(BaseModel):
52
+ xAxis: AxisSchema = Field(..., title="axis schema")
53
+ yAxis: AxisSchema8 = Field(..., title="axis schema")
54
+ name: Optional[Name] = None
55
+ legend: Optional[List] = Field(None, min_length=1)
56
+ """
57
+ Legend of y Axis data series
58
+ """
59
+ xDataArray: List
60
+ """
61
+ array containing values of x Axis
62
+ """
63
+ yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
@@ -0,0 +1,97 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/density_of_states.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional, Union
9
+
10
+ from pydantic import BaseModel, Field, constr
11
+
12
+
13
+ class Label(Enum):
14
+ energy = "energy"
15
+
16
+
17
+ class Units(Enum):
18
+ kJ_mol = "kJ/mol"
19
+ eV = "eV"
20
+ J_mol = "J/mol"
21
+ hartree = "hartree"
22
+ cm_1 = "cm-1"
23
+ rydberg = "rydberg"
24
+ eV_atom = "eV/atom"
25
+
26
+
27
+ class AxisSchema(BaseModel):
28
+ label: Label
29
+ """
30
+ label of an axis object
31
+ """
32
+ units: Optional[Units] = None
33
+ """
34
+ units for an axis
35
+ """
36
+
37
+
38
+ class Label8(Enum):
39
+ density_of_states = "density of states"
40
+
41
+
42
+ class Units12(Enum):
43
+ states_unitcell = "states/unitcell"
44
+
45
+
46
+ class AxisSchema10(BaseModel):
47
+ label: Label8
48
+ """
49
+ label of an axis object
50
+ """
51
+ units: Optional[Units12] = None
52
+ """
53
+ units for an axis
54
+ """
55
+
56
+
57
+ class Name(Enum):
58
+ density_of_states = "density_of_states"
59
+
60
+
61
+ class Spin(Enum):
62
+ number_0_5 = 0.5
63
+ number__0_5 = -0.5
64
+
65
+
66
+ class LegendItem(BaseModel):
67
+ element: Optional[str] = None
68
+ """
69
+ chemical element
70
+ """
71
+ index: Optional[int] = None
72
+ """
73
+ index inside sub-array of atoms of the same element type
74
+ """
75
+ electronicState: Optional[constr(pattern=r"^([1-5]{1})?(s|p|d|f|g).*$")] = None
76
+ """
77
+ electronic character and shell of PDOS, such as `1s` or `s`, or `total`
78
+ """
79
+ spin: Optional[Spin] = None
80
+ """
81
+ spin of the electronic state
82
+ """
83
+
84
+
85
+ class DensityOfStatesSchema(BaseModel):
86
+ xAxis: AxisSchema = Field(..., title="axis schema")
87
+ yAxis: AxisSchema10 = Field(..., title="axis schema")
88
+ name: Optional[Name] = None
89
+ legend: Optional[List[LegendItem]] = Field(None, min_length=1)
90
+ """
91
+ Legend of y Axis data series
92
+ """
93
+ xDataArray: List
94
+ """
95
+ array containing values of x Axis
96
+ """
97
+ yDataSeries: List[List[Union[float, str]]] = Field(..., title="1 dimension data series schema")
@@ -0,0 +1,40 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/dielectric_tensor.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional
9
+
10
+ from pydantic import BaseModel
11
+
12
+
13
+ class Name(Enum):
14
+ dielectric_tensor = "dielectric_tensor"
15
+
16
+
17
+ class Part(Enum):
18
+ real = "real"
19
+ imaginary = "imaginary"
20
+
21
+
22
+ class DielectricTensor(BaseModel):
23
+ part: Part
24
+ """
25
+ Real or imaginary part of the dielectric tensor component
26
+ """
27
+ spin: Optional[float] = None
28
+ frequencies: List[float]
29
+ """
30
+ Frequencies
31
+ """
32
+ components: List[List[float]]
33
+ """
34
+ Matrix with 3 columns, e.g. x, y, z
35
+ """
36
+
37
+
38
+ class DielectricTensorProperty(BaseModel):
39
+ name: Name
40
+ values: Optional[List[DielectricTensor]] = None
@@ -0,0 +1,64 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/file_content.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import Optional
9
+
10
+ from pydantic import BaseModel, Field
11
+
12
+
13
+ class Name(Enum):
14
+ file_content = "file_content"
15
+
16
+
17
+ class Filetype(Enum):
18
+ image = "image"
19
+ text = "text"
20
+ csv = "csv"
21
+
22
+
23
+ class ObjectStorageContainerData(BaseModel):
24
+ CONTAINER: Optional[str] = None
25
+ """
26
+ Object storage container for the file
27
+ """
28
+ NAME: Optional[str] = None
29
+ """
30
+ Name of the file inside the object storage bucket
31
+ """
32
+ PROVIDER: Optional[str] = None
33
+ """
34
+ Object storage provider
35
+ """
36
+ REGION: Optional[str] = None
37
+ """
38
+ Region for the object container specified in Container
39
+ """
40
+ SIZE: Optional[int] = None
41
+ """
42
+ Size of the file in bytes
43
+ """
44
+ TIMESTAMP: Optional[str] = None
45
+ """
46
+ Unix timestamp showing when the file was last modified
47
+ """
48
+
49
+
50
+ class FileContent(BaseModel):
51
+ name: Name
52
+ filetype: Optional[Filetype] = None
53
+ """
54
+ What kind of file this is, e.g. image / text
55
+ """
56
+ objectData: ObjectStorageContainerData = Field(..., title="Object Storage Container Data")
57
+ pathname: Optional[str] = None
58
+ """
59
+ Relative path to the directory that contains the file.
60
+ """
61
+ basename: Optional[str] = None
62
+ """
63
+ Basename of the file
64
+ """
@@ -0,0 +1,40 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/hubbard_u.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional
9
+
10
+ from pydantic import BaseModel, constr
11
+
12
+
13
+ class Name(Enum):
14
+ hubbard_u = "hubbard_u"
15
+
16
+
17
+ class Units(Enum):
18
+ eV = "eV"
19
+
20
+
21
+ class AtomicDataPerOrbitalNumeric(BaseModel):
22
+ id: int
23
+ """
24
+ Site number or index in the lattice
25
+ """
26
+ atomicSpecies: constr(pattern=r"^[a-zA-Z]{1,2}[\d+]?$")
27
+ """
28
+ Example: Co1, Mn
29
+ """
30
+ orbitalName: constr(pattern=r"^[1-7][sSpPdDfF]$")
31
+ value: float
32
+ """
33
+ Value related to a specific property, e.g., Hubbard U, V etc.
34
+ """
35
+
36
+
37
+ class HubbardUParameters(BaseModel):
38
+ name: Name
39
+ units: Optional[Units] = None
40
+ values: Optional[List[AtomicDataPerOrbitalNumeric]] = None
@@ -0,0 +1,54 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/hubbard_v.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional
9
+
10
+ from pydantic import BaseModel, constr
11
+
12
+
13
+ class Name(Enum):
14
+ hubbard_v = "hubbard_v"
15
+ hubbard_v_nn = "hubbard_v_nn"
16
+
17
+
18
+ class Units(Enum):
19
+ eV = "eV"
20
+
21
+
22
+ class AtomicDataPerOrbitalPairNumeric(BaseModel):
23
+ id: int
24
+ """
25
+ Site number or index in the lattice
26
+ """
27
+ id2: int
28
+ """
29
+ Site number or index in the lattice of second site
30
+ """
31
+ atomicSpecies: constr(pattern=r"^[a-zA-Z]{1,2}[\d+]?$")
32
+ """
33
+ Example: Co1, Mn
34
+ """
35
+ atomicSpecies2: constr(pattern=r"^[a-zA-Z]{1,2}[\d+]?$")
36
+ """
37
+ Example: Co2, O
38
+ """
39
+ orbitalName: Optional[constr(pattern=r"^[1-7][sSpPdDfF]$")] = None
40
+ orbitalName2: Optional[constr(pattern=r"^[1-7][sSpPdDfF]$")] = None
41
+ distance: Optional[float] = None
42
+ """
43
+ Distance between two sites in Bohr.
44
+ """
45
+ value: float
46
+ """
47
+ Value related to a specific property, e.g., Hubbard U, V etc.
48
+ """
49
+
50
+
51
+ class HubbardVParameters(BaseModel):
52
+ name: Name
53
+ units: Optional[Units] = None
54
+ values: Optional[List[AtomicDataPerOrbitalPairNumeric]] = None
@@ -0,0 +1,54 @@
1
+ # generated by datamodel-codegen:
2
+ # filename: properties_directory/non_scalar/hubbard_v_nn.json
3
+ # version: 0.25.5
4
+
5
+ from __future__ import annotations
6
+
7
+ from enum import Enum
8
+ from typing import List, Optional
9
+
10
+ from pydantic import BaseModel, constr
11
+
12
+
13
+ class Name(Enum):
14
+ hubbard_v = "hubbard_v"
15
+ hubbard_v_nn = "hubbard_v_nn"
16
+
17
+
18
+ class Units(Enum):
19
+ eV = "eV"
20
+
21
+
22
+ class AtomicDataPerOrbitalPairNumeric(BaseModel):
23
+ id: int
24
+ """
25
+ Site number or index in the lattice
26
+ """
27
+ id2: int
28
+ """
29
+ Site number or index in the lattice of second site
30
+ """
31
+ atomicSpecies: constr(pattern=r"^[a-zA-Z]{1,2}[\d+]?$")
32
+ """
33
+ Example: Co1, Mn
34
+ """
35
+ atomicSpecies2: constr(pattern=r"^[a-zA-Z]{1,2}[\d+]?$")
36
+ """
37
+ Example: Co2, O
38
+ """
39
+ orbitalName: Optional[constr(pattern=r"^[1-7][sSpPdDfF]$")] = None
40
+ orbitalName2: Optional[constr(pattern=r"^[1-7][sSpPdDfF]$")] = None
41
+ distance: Optional[float] = None
42
+ """
43
+ Distance between two sites in Bohr.
44
+ """
45
+ value: float
46
+ """
47
+ Value related to a specific property, e.g., Hubbard U, V etc.
48
+ """
49
+
50
+
51
+ class HubbardVParametersForNearestNeighbors(BaseModel):
52
+ name: Name
53
+ units: Optional[Units] = None
54
+ values: Optional[List[AtomicDataPerOrbitalPairNumeric]] = None