masster 0.4.5__py3-none-any.whl → 0.4.6__py3-none-any.whl

masster/__init__.py

@@ -1,5 +1,5 @@
 """
-master - Mass Spectrometry Analysis Assistant
+masster - Mass Spectrometry Analysis Assistant
 
 A comprehensive Python package for processing and analyzing untargeted metabolomics data,
 supporting both DDA (Data-Dependent Acquisition) and DIA (Data-Independent Acquisition)
@@ -8,14 +8,14 @@ mass spectrometry workflows.
 
 from __future__ import annotations
 
-from master._version import __version__
+from masster._version import __version__
 
-# from master._version import get_version
-from master.chromatogram import Chromatogram
-from master.lib import Lib
-from master.sample.sample import Sample
-from master.spectrum import Spectrum
-from master.study.study import Study
+# from masster._version import get_version
+from masster.chromatogram import Chromatogram
+from masster.lib import Lib
+from masster.sample.sample import Sample
+from masster.spectrum import Spectrum
+from masster.study.study import Study
 
 
 __all__ = [

masster/chromatogram.py

@@ -88,10 +88,10 @@ class Chromatogram:
 
     Example Usage:
         >>> import numpy as np
-        >>> from master import chrom
+        >>> from masster import Chromatogram
         >>> rt = np.linspace(0, 300, 1000)
         >>> intensity = np.random.normal(1000, 100, 1000)
-        >>> chromatogram = chrom(rt=rt, inty=intensity, label="EIC m/z 150")
+        >>> chromatogram = Chromatogram(rt=rt, inty=intensity, label="EIC m/z 150")
         >>> chromatogram.find_peaks()
         >>> chromatogram.calculate_area()
 

masster/logger.py

@@ -1,6 +1,6 @@
 # masster/logger.py
 """
-Simple logger system for master Study and Sample instances.
+Simple logger system for masster Study and Sample instances.
 Uses basic Python logging                timestamp = dt.strftime('%Y-%m-%d %H:%M:%S.%f')[:-3]
 
                 # Loguru-style colors for different log levels
@@ -59,7 +59,7 @@ class MasterLogger:
             self.sink = sink
 
         # Create a unique logger name for this instance
-        self.logger_name = f"master.{self.instance_type}.{self.instance_id}"
+        self.logger_name = f"masster.{self.instance_type}.{self.instance_id}"
 
         # Get a Python logger instance
         self.logger_instance = logging.getLogger(self.logger_name)
@@ -73,7 +73,7 @@ class MasterLogger:
         # Create a stream handler
         self.handler = logging.StreamHandler(self.sink)
 
-        # Create formatter that matches the original master style
+        # Create formatter that matches the original masster style
         class masterFormatter(logging.Formatter):
             def __init__(self, label):
                 super().__init__()

masster/sample/__init__.py

@@ -1,5 +1,5 @@
 """
-Sample module for master.
+Sample module for masster.
 
 This module provides the Sample class for handling mass spectrometry data.
 """

masster/sample/adducts.py

@@ -18,7 +18,7 @@ from typing import List, Dict
 from itertools import combinations
 
 # Import defaults class for external use
-from master.sample.defaults.find_adducts_def import find_adducts_defaults
+from masster.sample.defaults.find_adducts_def import find_adducts_defaults
 
 
 def _get_adducts(self, adducts_list: list = None, **kwargs):

masster/sample/h5.py

@@ -7,8 +7,8 @@ import polars as pl
 
 from typing import Any, Dict, List, Optional, Tuple
 
-from master.chromatogram import Chromatogram
-from master.spectrum import Spectrum
+from masster.chromatogram import Chromatogram
+from masster.spectrum import Spectrum
 
 
 def _save_sample5(
@@ -356,7 +356,7 @@ def _load_sample5(self, filename: str, map: bool = False):
             loaded_data = load_parameters_from_metadata(metadata_group)
 
             # Always create a fresh sample_defaults object
-            from master.sample.defaults.sample_def import sample_defaults
+            from masster.sample.defaults.sample_def import sample_defaults
 
             self.parameters = sample_defaults()
 
@@ -1096,7 +1096,7 @@ def _load_sample5_study(self, filename: str, map: bool = False):
             loaded_data = load_parameters_from_metadata(metadata_group)
 
             # Always create a fresh sample_defaults object
-            from master.sample.defaults.sample_def import sample_defaults
+            from masster.sample.defaults.sample_def import sample_defaults
 
             self.parameters = sample_defaults()
 

masster/sample/lib.py

@@ -34,7 +34,7 @@ Supported Adducts:
 
 Example Usage:
 ```python
-from master.sample.lib import Lib
+from masster.sample.lib import Lib
 
 # Create library instance
 lib = Lib()
@@ -63,7 +63,7 @@ import pyopenms as oms
 
 from tqdm import tqdm
 
-from master.chromatogram import Chromatogram
+from masster.chromatogram import Chromatogram
 # Parameters removed - using hardcoded defaults
 
 

masster/sample/load.py

@@ -47,10 +47,10 @@ import pyopenms as oms
 
 from tqdm import tqdm
 
-from master.chromatogram import Chromatogram
+from masster.chromatogram import Chromatogram
 
 # Parameters removed - using hardcoded defaults
-from master.spectrum import Spectrum
+from masster.spectrum import Spectrum
 
 
 def load(
@@ -556,12 +556,12 @@ def _load_wiff(
     filename=None,
 ):
     try:
-        # Use master's own implementation first
-        from master.sample.sciex import SciexWiffData as MasterSciexWiffData
+        # Use masster's own implementation first
+        from masster.sample.sciex import SciexWiffData as MasterSciexWiffData
 
         SciexWiffDataClass = MasterSciexWiffData
     except ImportError:
-        # Fallback to alpharaw if master implementation fails
+        # Fallback to alpharaw if masster implementation fails
         from alpharaw.sciex import SciexWiffData as AlpharawSciexWiffData
 
         SciexWiffDataClass = AlpharawSciexWiffData
@@ -972,8 +972,8 @@ def index_file(self):
         try:
             from alpharaw.sciex import SciexWiffData
         except ImportError:
-            # Fallback to master's own implementation
-            from master.sample.sciex import SciexWiffData
+            # Fallback to masster's own implementation
+            from masster.sample.sciex import SciexWiffData
 
         raw_data = SciexWiffData(centroided=False)
         raw_data.keep_k_peaks_per_spec = self.parameters.max_points_per_spectrum

masster/sample/parameters.py

@@ -85,7 +85,7 @@ def update_parameters(self, **kwargs):
                  - Individual parameter names and values (see sample_defaults for details)
     """
     # Import here to avoid circular imports
-    from master.sample.defaults.sample_def import (
+    from masster.sample.defaults.sample_def import (
         sample_defaults as SampleDefaults,
     )
 

masster/sample/plot.py

@@ -2073,7 +2073,7 @@ def plot_tic(
         return
 
     # Import helper locally to avoid circular imports
-    from master.study.helpers import get_tic
+    from masster.study.helpers import get_tic
 
     # Delegate TIC computation to study helper which handles ms1_df and scans_df fallbacks
     try:
@@ -2128,7 +2128,7 @@ def plot_bpc(
         return
 
     # Import helper locally to avoid circular imports
-    from master.study.helpers import get_bpc
+    from masster.study.helpers import get_bpc
 
     # Delegate BPC computation to study helper
     try:

masster/sample/processing.py

@@ -8,13 +8,13 @@ import pyopenms as oms
 
 from tqdm import tqdm
 
-from master.spectrum import Spectrum
+from masster.spectrum import Spectrum
 from .defaults.find_features_def import find_features_defaults
 from .defaults.find_ms2_def import find_ms2_defaults
 from .defaults.get_spectrum_def import get_spectrum_defaults
 
 
-from master.chromatogram import Chromatogram
+from masster.chromatogram import Chromatogram
 
 
 def get_spectrum(self, scan, **kwargs):

masster/sample/sample.py

@@ -23,7 +23,7 @@ Classes:
 
 Example Usage:
 ```python
-from master.sample import Sample
+from masster.sample import Sample
 
 sample = Sample(file="example.mzML")
 sample.find_features()
@@ -38,87 +38,87 @@ import sys
 
 import polars as pl
 
-from master._version import get_version
-from master.logger import MasterLogger
+from masster._version import get_version
+from masster.logger import MasterLogger
 
-from master.sample.defaults.sample_def import sample_defaults
-from master.sample.defaults.find_features_def import find_features_defaults
-from master.sample.defaults.find_adducts_def import find_adducts_defaults
-from master.sample.defaults.find_ms2_def import find_ms2_defaults
-from master.sample.defaults.get_spectrum_def import get_spectrum_defaults
+from masster.sample.defaults.sample_def import sample_defaults
+from masster.sample.defaults.find_features_def import find_features_defaults
+from masster.sample.defaults.find_adducts_def import find_adducts_defaults
+from masster.sample.defaults.find_ms2_def import find_ms2_defaults
+from masster.sample.defaults.get_spectrum_def import get_spectrum_defaults
 
 # Sample-specific imports
-from master.sample.h5 import _load_sample5
-from master.sample.h5 import _load_sample5_study
-from master.sample.h5 import _save_sample5
-from master.sample.helpers import _delete_ms2
-from master.sample.helpers import _estimate_memory_usage
-from master.sample.helpers import _get_scan_uids
-from master.sample.helpers import _get_feature_uids
-from master.sample.helpers import _features_sync
-
-# from master.sample.helpers import _parse_adduct_specs
-# from master.sample.helpers import _calculate_adduct_mass_shift
-# from master.sample.helpers import _parse_formula_expression
-# from master.sample.helpers import _calculate_molecular_mass
-# from master.sample.helpers import _parse_legacy_adduct_format
-# from master.sample.helpers import _extract_adduct_probability
-# from master.sample.helpers import _detect_adduct_groups_direct
-# from master.sample.helpers import _check_adduct_relationship
-from master.sample.adducts import _get_adducts
-from master.sample.adducts import find_adducts
-from master.sample.helpers import features_delete
-from master.sample.helpers import features_filter
-from master.sample.helpers import select
-from master.sample.helpers import select_closest_scan
-from master.sample.helpers import get_dda_stats
-from master.sample.helpers import get_feature
-from master.sample.helpers import get_scan
-from master.sample.helpers import get_eic
-from master.sample.helpers import set_source
-from master.sample.helpers import _recreate_feature_map
-from master.sample.helpers import _get_feature_map
-from master.sample.load import _load_featureXML
-from master.sample.load import _load_ms2data
-from master.sample.load import _load_mzML
-from master.sample.load import _load_raw
-from master.sample.load import _load_wiff
-from master.sample.load import chrom_extract
-from master.sample.load import index_file
-from master.sample.load import load
-from master.sample.load import load_noms1
-from master.sample.load import load_study
-from master.sample.load import sanitize
-from master.sample.plot import plot_2d
-from master.sample.plot import plot_2d_oracle
-from master.sample.plot import plot_dda_stats
-from master.sample.plot import plot_chrom
-from master.sample.plot import plot_feature_stats
-from master.sample.plot import plot_ms2_cycle
-from master.sample.plot import plot_ms2_eic
-from master.sample.plot import plot_ms2_q1
-from master.sample.plot import plot_bpc
-from master.sample.plot import plot_tic
-from master.sample.plot import _handle_sample_plot_output
-from master.sample.processing import _clean_features_df
-from master.sample.processing import _features_deisotope
-from master.sample.processing import _get_ztscan_stats
-from master.sample.processing import _spec_to_mat
-from master.sample.processing import analyze_dda
-from master.sample.processing import find_features
-from master.sample.processing import find_ms2
-from master.sample.processing import get_spectrum
-from master.sample.parameters import store_history
-from master.sample.parameters import get_parameters
-from master.sample.parameters import update_parameters
-from master.sample.parameters import get_parameters_property
-from master.sample.parameters import set_parameters_property
-from master.sample.save import _save_featureXML
-from master.sample.save import export_chrom
-from master.sample.save import export_dda_stats
-from master.sample.save import export_features
-from master.sample.save import export_mgf
-from master.sample.save import save
+from masster.sample.h5 import _load_sample5
+from masster.sample.h5 import _load_sample5_study
+from masster.sample.h5 import _save_sample5
+from masster.sample.helpers import _delete_ms2
+from masster.sample.helpers import _estimate_memory_usage
+from masster.sample.helpers import _get_scan_uids
+from masster.sample.helpers import _get_feature_uids
+from masster.sample.helpers import _features_sync
+
+# from masster.sample.helpers import _parse_adduct_specs
+# from masster.sample.helpers import _calculate_adduct_mass_shift
+# from masster.sample.helpers import _parse_formula_expression
+# from masster.sample.helpers import _calculate_molecular_mass
+# from masster.sample.helpers import _parse_legacy_adduct_format
+# from masster.sample.helpers import _extract_adduct_probability
+# from masster.sample.helpers import _detect_adduct_groups_direct
+# from masster.sample.helpers import _check_adduct_relationship
+from masster.sample.adducts import _get_adducts
+from masster.sample.adducts import find_adducts
+from masster.sample.helpers import features_delete
+from masster.sample.helpers import features_filter
+from masster.sample.helpers import select
+from masster.sample.helpers import select_closest_scan
+from masster.sample.helpers import get_dda_stats
+from masster.sample.helpers import get_feature
+from masster.sample.helpers import get_scan
+from masster.sample.helpers import get_eic
+from masster.sample.helpers import set_source
+from masster.sample.helpers import _recreate_feature_map
+from masster.sample.helpers import _get_feature_map
+from masster.sample.load import _load_featureXML
+from masster.sample.load import _load_ms2data
+from masster.sample.load import _load_mzML
+from masster.sample.load import _load_raw
+from masster.sample.load import _load_wiff
+from masster.sample.load import chrom_extract
+from masster.sample.load import index_file
+from masster.sample.load import load
+from masster.sample.load import load_noms1
+from masster.sample.load import load_study
+from masster.sample.load import sanitize
+from masster.sample.plot import plot_2d
+from masster.sample.plot import plot_2d_oracle
+from masster.sample.plot import plot_dda_stats
+from masster.sample.plot import plot_chrom
+from masster.sample.plot import plot_feature_stats
+from masster.sample.plot import plot_ms2_cycle
+from masster.sample.plot import plot_ms2_eic
+from masster.sample.plot import plot_ms2_q1
+from masster.sample.plot import plot_bpc
+from masster.sample.plot import plot_tic
+from masster.sample.plot import _handle_sample_plot_output
+from masster.sample.processing import _clean_features_df
+from masster.sample.processing import _features_deisotope
+from masster.sample.processing import _get_ztscan_stats
+from masster.sample.processing import _spec_to_mat
+from masster.sample.processing import analyze_dda
+from masster.sample.processing import find_features
+from masster.sample.processing import find_ms2
+from masster.sample.processing import get_spectrum
+from masster.sample.parameters import store_history
+from masster.sample.parameters import get_parameters
+from masster.sample.parameters import update_parameters
+from masster.sample.parameters import get_parameters_property
+from masster.sample.parameters import set_parameters_property
+from masster.sample.save import _save_featureXML
+from masster.sample.save import export_chrom
+from masster.sample.save import export_dda_stats
+from masster.sample.save import export_features
+from masster.sample.save import export_mgf
+from masster.sample.save import save
 
 
 class Sample:
@@ -329,20 +329,20 @@ class Sample:
 
     def _reload(self):
         """
-        Reloads all master modules to pick up any changes to their source code,
+        Reloads all masster modules to pick up any changes to their source code,
         and updates the instance's class reference to the newly reloaded class version.
         This ensures that the instance uses the latest implementation without restarting the interpreter.
         """
         # Reset logger configuration flags to allow proper reconfiguration after reload
         try:
-            import master.logger as logger_module
+            import masster.logger as logger_module
 
             if hasattr(logger_module, "_SAMPLE_LOGGER_CONFIGURED"):
                 logger_module._SAMPLE_LOGGER_CONFIGURED = False
         except Exception:
             pass
 
-        # Get the base module name (master)
+        # Get the base module name (masster)
         base_modname = self.__class__.__module__.split(".")[0]
         current_module = self.__class__.__module__
 
@@ -358,7 +358,7 @@ class Sample:
             ):
                 sample_modules.append(module_name)
 
-        # Add core master modules
+        # Add core masster modules
         core_modules = [
             f"{base_modname}._version",
             f"{base_modname}.chromatogram",
@@ -437,9 +437,9 @@ class Sample:
 
     def __str__(self):
         if self.features_df is None:
-            str = f"master Sample, source: {os.path.basename(self.file_path)}, features: 0"
+            str = f"masster Sample, source: {os.path.basename(self.file_path)}, features: 0"
         else:
-            str = f"master Sample, source: {os.path.basename(self.file_path)}, features: {len(self.features_df)}"
+            str = f"masster Sample, source: {os.path.basename(self.file_path)}, features: {len(self.features_df)}"
         return str
 
 

masster/sample/save.py

@@ -67,7 +67,7 @@ import pyopenms as oms
 from tqdm import tqdm
 
 # Parameters removed - using hardcoded defaults
-from master.spectrum import combine_peaks
+from masster.spectrum import combine_peaks
 
 
 def save(self, filename=None):

masster/spectrum.py

@@ -138,10 +138,10 @@ class Spectrum:
 
     Example Usage:
         >>> import numpy as np
-        >>> from master import spec
+        >>> from masster import Spectrum
         >>> mz = np.array([100.0, 150.0, 200.0, 250.0])
         >>> intensity = np.array([1000, 5000, 3000, 800])
-        >>> spectrum = spec(mz=mz, inty=intensity, ms_level=1)
+        >>> spectrum = Spectrum(mz=mz, inty=intensity, ms_level=1)
         >>> spectrum.find_peaks()
         >>> spectrum.plot()
 

masster/study/__init__.py

@@ -1,5 +1,5 @@
 """
-Study module for master.
+Study module for masster.
 
 This module provides the Sample class for handling mass spectrometry data.
 """

masster/study/export.py

@@ -10,9 +10,9 @@ import polars as pl
 
 from tqdm import tqdm
 
-from master.spectrum import combine_peaks
-from master.study.defaults import export_mgf_defaults
-from master._version import get_version
+from masster.spectrum import combine_peaks
+from masster.study.defaults import export_mgf_defaults
+from masster._version import get_version
 
 
 def _get_mgf_df(self, **kwargs):
@@ -444,7 +444,7 @@ def export_mztab(self, filename: str = None, include_mgf=True, **kwargs) -> None
     full_id_data = None
     try:
         # Import here to avoid circular imports
-        from master.study.id import get_id
+        from masster.study.id import get_id
 
         # Get full enriched identification data for SOME section
         full_id_data = get_id(self)
@@ -1157,7 +1157,7 @@ def export_xlsx(self, filename: str = None) -> None:
 
     # 3. Identification results
     try:
-        from master.study.id import get_id
+        from masster.study.id import get_id
 
         id_df = get_id(self)
         if id_df is not None and not id_df.is_empty():
@@ -1272,7 +1272,7 @@ def export_parquet(self, basename: str = None) -> None:
 
     # 3. Identification results
     try:
-        from master.study.id import get_id
+        from masster.study.id import get_id
 
         id_df = get_id(self)
         if id_df is not None and not id_df.is_empty():

masster/study/h5.py

@@ -35,8 +35,8 @@ import h5py
 import polars as pl
 from tqdm import tqdm
 
-from master.chromatogram import Chromatogram
-from master.spectrum import Spectrum
+from masster.chromatogram import Chromatogram
+from masster.spectrum import Spectrum
 
 
 # Helper functions for HDF5 operations
@@ -1734,7 +1734,7 @@ def _load_study5(self, filename=None):
                     self.history = {}
 
                 # Reconstruct self.parameters from loaded history
-                from master.study.defaults.study_def import study_defaults
+                from masster.study.defaults.study_def import study_defaults
 
                 # Always create a fresh study_defaults object to ensure we have all defaults
                 self.parameters = study_defaults()

masster/study/helpers.py

@@ -22,7 +22,7 @@ import pandas as pd
 import polars as pl
 
 from tqdm import tqdm
-from master.chromatogram import Chromatogram
+from masster.chromatogram import Chromatogram
 
 
 # =====================================================================================
@@ -816,7 +816,7 @@ def get_sample(self, sample):
 
     This helper mirrors the original Study.get_sample method but lives in helpers for reuse.
     """
-    from master.sample.sample import Sample
+    from masster.sample.sample import Sample
 
     if isinstance(sample, Sample):
         return sample
@@ -942,7 +942,7 @@ def restore_features(self, samples=None, maps=False):
         maps (bool, optional): If True, also load featureXML data and update study.feature_maps.
     """
     import datetime
-    from master.sample.sample import Sample
+    from masster.sample.sample import Sample
 
     if self.features_df is None or self.features_df.is_empty():
         self.logger.error("No features_df found in study.")
@@ -1100,8 +1100,8 @@ def restore_chrom(self, samples=None, mz_tol=0.010, rt_tol=10.0):
     """
     import datetime
     import numpy as np
-    from master.sample.sample import Sample
-    from master.chromatogram import Chromatogram
+    from masster.sample.sample import Sample
+    from masster.chromatogram import Chromatogram
 
     if self.features_df is None or self.features_df.is_empty():
         self.logger.error("No features_df found in study.")
@@ -2014,7 +2014,7 @@ def monkey_patch_study():
     as `features_select_original` if not already set, then replaces Study.features_select
     with the optimized `features_select` defined above. This function is idempotent.
     """
-    from master.study.study import Study
+    from masster.study.study import Study
 
     # Only set original if it doesn't exist yet
     if not hasattr(Study, "features_select_original"):
@@ -2276,7 +2276,7 @@ def consensus_select(
                 default_mz_tol = default_mz_tol.eic_mz_tol
             else:
                 # Fallback to align_defaults if study parameters not available
-                from master.study.defaults.align_def import align_defaults
+                from masster.study.defaults.align_def import align_defaults
 
                 default_mz_tol = align_defaults().mz_max_diff
 
@@ -2314,7 +2314,7 @@ def consensus_select(
                 default_rt_tol = default_rt_tol.eic_rt_tol
             else:
                 # Fallback to align_defaults if study parameters not available
-                from master.study.defaults.align_def import align_defaults
+                from masster.study.defaults.align_def import align_defaults
 
                 default_rt_tol = align_defaults().rt_tol
 
@@ -3549,7 +3549,7 @@ def _ensure_features_df_schema_order(self):
     try:
         import os
         import json
-        from master.study.h5 import _reorder_columns_by_schema
+        from masster.study.h5 import _reorder_columns_by_schema
 
         # Load schema
         schema_path = os.path.join(os.path.dirname(__file__), "study5_schema.json")

masster/study/helpers_optimized.py

@@ -345,7 +345,7 @@ def monkey_patch_study():
 
     Call this function to replace the original features_select with the optimized version.
     """
-    from master.study.study import Study
+    from masster.study.study import Study
 
     # Store original method for benchmarking
     Study.features_select_original = Study.features_select

masster/study/id.py

@@ -36,7 +36,7 @@ def lib_load(
     """
     # Lazy import to avoid circular imports at module import time
     try:
-        from master.lib.lib import Lib
+        from masster.lib.lib import Lib
     except Exception:
         Lib = None
 
@@ -58,7 +58,7 @@ def lib_load(
     if isinstance(lib_source, str):
         if Lib is None:
             raise ImportError(
-                "Could not import master.lib.lib.Lib - required for CSV loading",
+                "Could not import masster.lib.lib.Lib - required for CSV loading",
             )
 
         lib_obj = Lib()
@@ -74,7 +74,7 @@ def lib_load(
 
     else:
         raise TypeError(
-            "lib_source must be a CSV file path (str), a master.lib.Lib instance, or have a 'lib_df' attribute",
+            "lib_source must be a CSV file path (str), a masster.lib.Lib instance, or have a 'lib_df' attribute",
         )
 
     # Ensure lib_df is populated
@@ -159,7 +159,7 @@ def identify(study, features=None, params=None, **kwargs):
     """
     # Import defaults class
     try:
-        from master.study.defaults.identify_def import identify_defaults
+        from masster.study.defaults.identify_def import identify_defaults
     except ImportError:
         identify_defaults = None
 

masster/study/load.py

@@ -10,10 +10,10 @@ import pyopenms as oms
 
 from tqdm import tqdm
 
-from master.chromatogram import Chromatogram
-from master.study.defaults import fill_defaults
-from master.sample.sample import Sample
-from master.spectrum import Spectrum
+from masster.chromatogram import Chromatogram
+from masster.study.defaults import fill_defaults
+from masster.sample.sample import Sample
+from masster.spectrum import Spectrum
 
 
 # Pre-import heavy modules to avoid repeated loading in add_sample()
@@ -533,7 +533,7 @@ def fill_single(self, **kwargs):
         min_samples_abs: Absolute minimum sample threshold (default: 2)
     """
     # parameters initialization
-    from master.study.defaults import fill_defaults
+    from masster.study.defaults import fill_defaults
 
     params = fill_defaults()
 

masster/study/plot.py

@@ -1132,7 +1132,7 @@ def plot_bpc(
     from bokeh.plotting import figure, show, output_file
     from bokeh.models import ColumnDataSource, HoverTool
     from bokeh.io.export import export_png
-    from master.study.helpers import get_bpc
+    from masster.study.helpers import get_bpc
 
     sample_uids = self._get_sample_uids(samples)
     if not sample_uids:
@@ -1309,7 +1309,7 @@ def plot_eic(
     from bokeh.plotting import figure, show, output_file
     from bokeh.models import ColumnDataSource, HoverTool
     from bokeh.io.export import export_png
-    from master.study.helpers import get_eic
+    from masster.study.helpers import get_eic
 
     # Use study's eic_mz_tol parameter as default if not provided
     if mz_tol is None:
@@ -2325,7 +2325,7 @@ def plot_tic(
     from bokeh.plotting import figure, show, output_file
     from bokeh.models import ColumnDataSource, HoverTool
     from bokeh.io.export import export_png
-    from master.study.helpers import get_tic
+    from masster.study.helpers import get_tic
 
     sample_uids = self._get_sample_uids(samples)
     if not sample_uids:

masster/study/processing.py

@@ -8,7 +8,7 @@ import pyopenms as oms
 
 from tqdm import tqdm
 
-from master.study.defaults import (
+from masster.study.defaults import (
     align_defaults,
     find_ms2_defaults,
     integrate_defaults,

masster/study/save.py

@@ -9,7 +9,7 @@ import pyopenms as oms
 
 from tqdm import tqdm
 
-from master.sample.sample import Sample
+from masster.sample.sample import Sample
 
 
 def save(self, filename=None, add_timestamp=True, compress=False):

masster/study/study.py

@@ -52,111 +52,111 @@ import sys
 import polars as pl
 
 # Study-specific imports
-from master.study.h5 import _load_study5
-from master.study.h5 import _save_study5
-from master.study.h5 import _save_study5_compressed
-from master.study.helpers import _get_consensus_uids
-from master.study.helpers import _get_feature_uids
-from master.study.helpers import _get_sample_uids
-from master.study.helpers import _ensure_features_df_schema_order
-from master.study.helpers import compress
-from master.study.helpers import compress_features
-from master.study.helpers import compress_ms2
-from master.study.helpers import compress_chrom
-from master.study.helpers import restore_features
-from master.study.helpers import restore_chrom
-from master.study.helpers import restore_ms2
-from master.study.helpers import decompress
-from master.study.helpers import fill_reset
-from master.study.helpers import get_chrom
-from master.study.helpers import get_sample
-from master.study.helpers import get_consensus
-from master.study.helpers import get_consensus_matches
-from master.study.helpers import get_consensus_matrix
-from master.study.helpers import get_orphans
-from master.study.helpers import get_gaps_matrix
-from master.study.helpers import get_gaps_stats
-from master.study.helpers import align_reset
-from master.study.helpers import set_folder
-from master.study.helpers import set_source
-from master.study.helpers import sample_color
-from master.study.helpers import sample_color_reset
-from master.study.helpers import sample_name_replace
-from master.study.helpers import sample_name_reset
-from master.study.helpers import samples_select
-from master.study.helpers import samples_delete
-from master.study.helpers import features_select
-from master.study.helpers import features_filter
-from master.study.helpers import features_delete
-from master.study.helpers import consensus_select
-from master.study.helpers import consensus_filter
-from master.study.helpers import consensus_delete
-from master.study.load import add
-from master.study.load import add_sample
-from master.study.load import _add_samples_batch
-from master.study.load import _add_sample_optimized
-from master.study.load import _add_sample_standard
-from master.study.load import _sample_color_reset_optimized
-from master.study.load import fill_single
-from master.study.load import fill
-from master.study.load import _process_sample_for_parallel_fill
-from master.study.load import _get_missing_consensus_sample_combinations
-from master.study.load import load
-from master.study.load import _load_consensusXML
-from master.study.load import load_features
-from master.study.load import sanitize
-from master.study.plot import plot_alignment
-from master.study.plot import plot_consensus_2d
-from master.study.plot import plot_samples_2d
-from master.study.plot import plot_consensus_stats
-from master.study.plot import plot_chrom
-from master.study.plot import plot_pca
-from master.study.plot import plot_bpc
-from master.study.plot import plot_tic
-from master.study.plot import plot_eic
-from master.study.plot import plot_rt_correction
-from master.study.processing import align
-from master.study.processing import merge
-from master.study.processing import integrate
-from master.study.processing import find_ms2
-from master.study.parameters import store_history
-from master.study.parameters import get_parameters
-from master.study.parameters import update_parameters
-from master.study.parameters import get_parameters_property
-from master.study.parameters import set_parameters_property
-from master.study.save import save, save_consensus, _save_consensusXML, save_samples
-from master.study.export import (
+from masster.study.h5 import _load_study5
+from masster.study.h5 import _save_study5
+from masster.study.h5 import _save_study5_compressed
+from masster.study.helpers import _get_consensus_uids
+from masster.study.helpers import _get_feature_uids
+from masster.study.helpers import _get_sample_uids
+from masster.study.helpers import _ensure_features_df_schema_order
+from masster.study.helpers import compress
+from masster.study.helpers import compress_features
+from masster.study.helpers import compress_ms2
+from masster.study.helpers import compress_chrom
+from masster.study.helpers import restore_features
+from masster.study.helpers import restore_chrom
+from masster.study.helpers import restore_ms2
+from masster.study.helpers import decompress
+from masster.study.helpers import fill_reset
+from masster.study.helpers import get_chrom
+from masster.study.helpers import get_sample
+from masster.study.helpers import get_consensus
+from masster.study.helpers import get_consensus_matches
+from masster.study.helpers import get_consensus_matrix
+from masster.study.helpers import get_orphans
+from masster.study.helpers import get_gaps_matrix
+from masster.study.helpers import get_gaps_stats
+from masster.study.helpers import align_reset
+from masster.study.helpers import set_folder
+from masster.study.helpers import set_source
+from masster.study.helpers import sample_color
+from masster.study.helpers import sample_color_reset
+from masster.study.helpers import sample_name_replace
+from masster.study.helpers import sample_name_reset
+from masster.study.helpers import samples_select
+from masster.study.helpers import samples_delete
+from masster.study.helpers import features_select
+from masster.study.helpers import features_filter
+from masster.study.helpers import features_delete
+from masster.study.helpers import consensus_select
+from masster.study.helpers import consensus_filter
+from masster.study.helpers import consensus_delete
+from masster.study.load import add
+from masster.study.load import add_sample
+from masster.study.load import _add_samples_batch
+from masster.study.load import _add_sample_optimized
+from masster.study.load import _add_sample_standard
+from masster.study.load import _sample_color_reset_optimized
+from masster.study.load import fill_single
+from masster.study.load import fill
+from masster.study.load import _process_sample_for_parallel_fill
+from masster.study.load import _get_missing_consensus_sample_combinations
+from masster.study.load import load
+from masster.study.load import _load_consensusXML
+from masster.study.load import load_features
+from masster.study.load import sanitize
+from masster.study.plot import plot_alignment
+from masster.study.plot import plot_consensus_2d
+from masster.study.plot import plot_samples_2d
+from masster.study.plot import plot_consensus_stats
+from masster.study.plot import plot_chrom
+from masster.study.plot import plot_pca
+from masster.study.plot import plot_bpc
+from masster.study.plot import plot_tic
+from masster.study.plot import plot_eic
+from masster.study.plot import plot_rt_correction
+from masster.study.processing import align
+from masster.study.processing import merge
+from masster.study.processing import integrate
+from masster.study.processing import find_ms2
+from masster.study.parameters import store_history
+from masster.study.parameters import get_parameters
+from masster.study.parameters import update_parameters
+from masster.study.parameters import get_parameters_property
+from masster.study.parameters import set_parameters_property
+from masster.study.save import save, save_consensus, _save_consensusXML, save_samples
+from masster.study.export import (
     export_mgf,
     export_mztab,
     export_xlsx,
     export_parquet,
     _get_mgf_df,
 )
-from master.study.id import lib_load, identify, get_id, id_reset, lib_reset
-from master.study.id import (
+from masster.study.id import lib_load, identify, get_id, id_reset, lib_reset
+from masster.study.id import (
     _get_adducts,
     _calculate_formula_mass_shift,
     _format_adduct_name,
     _parse_element_counts,
 )
 
-from master.logger import MasterLogger
-from master.study.defaults.study_def import study_defaults
-from master.study.defaults.align_def import align_defaults
-from master.study.defaults.export_def import export_mgf_defaults
-from master.study.defaults.fill_chrom_def import fill_chrom_defaults
-from master.study.defaults.fill_def import fill_defaults
-from master.study.defaults.find_consensus_def import find_consensus_defaults
-from master.study.defaults.find_ms2_def import find_ms2_defaults
-from master.study.defaults.integrate_chrom_def import integrate_chrom_defaults
-from master.study.defaults.integrate_def import integrate_defaults
-from master.study.defaults.merge_def import merge_defaults
+from masster.logger import MasterLogger
+from masster.study.defaults.study_def import study_defaults
+from masster.study.defaults.align_def import align_defaults
+from masster.study.defaults.export_def import export_mgf_defaults
+from masster.study.defaults.fill_chrom_def import fill_chrom_defaults
+from masster.study.defaults.fill_def import fill_defaults
+from masster.study.defaults.find_consensus_def import find_consensus_defaults
+from masster.study.defaults.find_ms2_def import find_ms2_defaults
+from masster.study.defaults.integrate_chrom_def import integrate_chrom_defaults
+from masster.study.defaults.integrate_def import integrate_defaults
+from masster.study.defaults.merge_def import merge_defaults
 
 # Import sample defaults
-from master.sample.defaults.sample_def import sample_defaults
-from master.sample.defaults.find_features_def import find_features_defaults
-from master.sample.defaults.find_adducts_def import find_adducts_defaults
-from master.sample.defaults.get_spectrum_def import get_spectrum_defaults
+from masster.sample.defaults.sample_def import sample_defaults
+from masster.sample.defaults.find_features_def import find_features_defaults
+from masster.sample.defaults.find_adducts_def import find_adducts_defaults
+from masster.sample.defaults.get_spectrum_def import get_spectrum_defaults
 
 # Warning symbols for info display
 _WARNING_SYMBOL = "⚠️"  # Yellow warning triangle
@@ -188,8 +188,8 @@ class Study:
         - `export_consensus()`: Export consensus features for downstream analysis.
 
     Example Usage:
-        >>> from master import study
-        >>> study_obj = study(folder="./data")
+        >>> from masster import Study
+        >>> study_obj = Study(folder="./data")
         >>> study_obj.load_folder("./mzml_files")
         >>> study_obj.process_all()
         >>> study_obj.align()
@@ -479,20 +479,20 @@ class Study:
 
     def _reload(self):
         """
-        Reloads all master modules to pick up any changes to their source code,
+        Reloads all masster modules to pick up any changes to their source code,
         and updates the instance's class reference to the newly reloaded class version.
         This ensures that the instance uses the latest implementation without restarting the interpreter.
         """
         # Reset logger configuration flags to allow proper reconfiguration after reload
         """        try:
-            import master.sample.logger as logger_module
+            import masster.sample.logger as logger_module
 
             if hasattr(logger_module, "_STUDY_LOGGER_CONFIGURED"):
                 logger_module._STUDY_LOGGER_CONFIGURED = False
         except Exception:
             pass"""
 
-        # Get the base module name (master)
+        # Get the base module name (masster)
         base_modname = self.__class__.__module__.split(".")[0]
         current_module = self.__class__.__module__
 
@@ -508,7 +508,7 @@ class Study:
             ):
                 study_modules.append(module_name)
 
-        # Add core master modules
+        # Add core masster modules
         core_modules = [
             f"{base_modname}._version",
             f"{base_modname}.chromatogram",

{masster-0.4.5.dist-info → masster-0.4.6.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: masster
-Version: 0.4.5
+Version: 0.4.6
 Summary: Mass spectrometry data analysis package
 Author: Zamboni Lab
 License-Expression: AGPL-3.0-only
@@ -32,17 +32,17 @@ Requires-Dist: marimo>=0.14.16
 Requires-Dist: matplotlib>=3.8.0
 Requires-Dist: pandas>=2.2.0
 Requires-Dist: panel>=1.7.0
-Requires-Dist: polars>=1.0.0
 Requires-Dist: pyopenms>=3.3.0
 Requires-Dist: pyteomics>=4.7.0
 Requires-Dist: pythonnet>=3.0.0
-Requires-Dist: scipy>=1.12.0
 Requires-Dist: tqdm>=4.65.0
 Requires-Dist: openpyxl>=3.1.5
 Requires-Dist: cmap>=0.6.2
 Requires-Dist: altair>=5.5.0
 Requires-Dist: scikit-learn>=1.7.1
 Requires-Dist: ipython>=9.4.0
+Requires-Dist: scipy>=1.14.1
+Requires-Dist: polars>=1.32.3
 Provides-Extra: dev
 Requires-Dist: pytest>=7.0.0; extra == "dev"
 Requires-Dist: pytest-cov>=4.0.0; extra == "dev"

{masster-0.4.5.dist-info → masster-0.4.6.dist-info}/RECORD

@@ -1,8 +1,8 @@
-masster/__init__.py,sha256=ew7NLZoNITjngEGNArMoSZ-pRZMNoKncfjrBr3hFOTw,730
+masster/__init__.py,sha256=8U4cIteNlYyHDrxWSbB_MsDKCX9tds07SJG8-vh8Oa8,738
 masster/_version.py,sha256=VO89cZ_6MtW0W_P2yFvZpdGOhoWdoBYiY0efEf1SqsA,256
-masster/chromatogram.py,sha256=JrlvhuH-jUkA6YLeytrs4DEx2MlbrUNcyHm_JYVuOzE,19304
-masster/logger.py,sha256=XePn7BUOmfHjy936IlfCDzIsk2SBmVQNT0wOznf6GLI,14744
-masster/spectrum.py,sha256=pYaRwurCcPCZ6JLUjhrNQtdfv5u9LVTPTzUGFaeokXs,47709
+masster/chromatogram.py,sha256=iYpdv8C17zVnlWvOFgAn9ns2uFGiF-GgoYf5QVVAbHs,19319
+masster/logger.py,sha256=WoJSi6si7F04hhSfE9wqBvHLuZkw3YGCgPd3vn6bgCE,14747
+masster/spectrum.py,sha256=_upC_g2N9gwTaflXAugs9pSXpKUmzbIehofDordk7WI,47718
 masster/data/dda/20250530_VH_IQX_KW_RP_HSST3_100mm_12min_pos_v4_DDA_OT_C-MiLUT_QC_dil2_01_20250602151849.sample5,sha256=LdJMF8uLoDm9ixZNHBoOzBH6hX7NGY7vTvqa2Pzetb8,6539174
 masster/data/dda/20250530_VH_IQX_KW_RP_HSST3_100mm_12min_pos_v4_DDA_OT_C-MiLUT_QC_dil3_01_20250602150634.sample5,sha256=hWUfslGoOTiQw59jENSBXP4sa6DdkbOi40FJ68ep61Q,6956773
 masster/data/dda/20250530_VH_IQX_KW_RP_HSST3_100mm_12min_pos_v4_MS1_C-MiLUT_C008_v6_r38_01.sample5,sha256=dSd2cIgYYdRcNSzkhqlZCeWKi3x8Hhhcx8BFMuiVG4c,11382948
@@ -18,19 +18,19 @@ masster/data/wiff/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecR
 masster/data/wiff/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.wiff2,sha256=TFB0HW4Agkig6yht7FtgjUdbXax8jjKaHpSZSvuU5vs,3252224
 masster/lib/__init__.py,sha256=TcePNx3SYZHz6763TL9Sg4gUNXaRWjlrOtyS6vsu-hg,178
 masster/lib/lib.py,sha256=seAOqzat74iF6YnbNakU3rF5MN5t9WABIpcIPTvU1q8,24987
-masster/sample/__init__.py,sha256=nZ7wqDRqYVFnm9fvTJXnlTbxSMqulQC1RKR7WwDaSoY,169
-masster/sample/adducts.py,sha256=SIJsPI-3dtnoo2wA4E75kg8uiBVrVDTX6J0VW_Dawlw,32589
-masster/sample/h5.py,sha256=2UnPspkn2v0_iZS_aZsb-JjlxTld2Ts2DGpzqrqBDSw,111882
+masster/sample/__init__.py,sha256=HL0m1ept0PMAYUCQtDDnkdOS12IFl6oLAq4TZQz83uY,170
+masster/sample/adducts.py,sha256=jdtkkiMFeObRv3myluUx--IfpRsEq3-hPgkCb2VUxy4,32590
+masster/sample/h5.py,sha256=nl7zVExroa4k4-8YJWLU-Ipyj_ynrqqGmqJ5km8DAr4,111886
 masster/sample/helpers.py,sha256=JhzFpNh7j7YVUibIMuPQ50hBcGDEBCaBbmwA3Z5OhgM,41336
-masster/sample/lib.py,sha256=nBbSD6W68NuR-Xfd9LKFMY_L_oQnVwb8KyJEbasDJSE,33753
-masster/sample/load.py,sha256=CrwUwmBaC6sn78MGS0r3s13pC2aKicJZUsdOdt4HAEk,50978
-masster/sample/parameters.py,sha256=pxWYqMKFvU-MreDZAF9Ey7_Z0Y6PaG0F8VHrfIUy3SI,4455
-masster/sample/plot.py,sha256=uM6RlgWK-IURdC0jUvu0jheYvQYKFtWom0dzrYNRqfU,82755
-masster/sample/processing.py,sha256=KMRNrXLcvvD4NmGjDjsMqV6qgHqIWlhsk5Du-4xcm3M,49769
+masster/sample/lib.py,sha256=E-j9c3Wd8f9a-H8xj7CAOwlA8KcyXPoFyYm3c8r7LtI,33755
+masster/sample/load.py,sha256=ie8krEADEPKMP35D6pTkuajvSP2il7gcmxn5gg86Qco,50985
+masster/sample/parameters.py,sha256=Gg2KcuNbV_wZ_Wwv93QlM5J19ji0oSIvZLPV1NoBmq0,4456
+masster/sample/plot.py,sha256=abLnG0Bk75vqSGQz6uA3uTK3IE9N-s687ZH-n8Mhdzg,82757
+masster/sample/processing.py,sha256=lCHRv290oAFOxe_zR5GMi4FdxodjJh1rj2uLWy_wHnc,49771
 masster/sample/quant.py,sha256=tHNjvUFTdehKR31BXBZnVsBxMD9XJHgaltITOjr71uE,7562
-masster/sample/sample.py,sha256=p5lgs7GMf94Uqmog6YKshuoWAy-yrk9gf-zxncYwzog,18267
+masster/sample/sample.py,sha256=i9bnNOQCD33awRyIf6UIq7fV-FB8MqeSvygoPaFfJTU,18351
 masster/sample/sample5_schema.json,sha256=EKHVKXhqMqsavO34A4AJLPpysW0s2iLuLwjeTJP9R_8,3916
-masster/sample/save.py,sha256=gaENxcrPDU5W3XoyROaDUWCKae468H-Np1-_LMO6s1Q,32499
+masster/sample/save.py,sha256=XZl5ITYdOjojYFOoUZ-0ygVSPH1kT5Va6e8NyuTRNAI,32500
 masster/sample/sciex.py,sha256=vnbxsq_qnAQVuzcpziP1o3IC4kM5amGBcPmC2TAuDLw,46319
 masster/sample/defaults/__init__.py,sha256=A09AOP44cxD_oYohyt7XFUho0zndRcrzVD4DUaGnKH4,447
 masster/sample/defaults/find_adducts_def.py,sha256=Bu2KiBJRxD0SAnOPNMm_Nk-6fx6QYoRXjFNGzz-0_o0,13570
@@ -38,18 +38,18 @@ masster/sample/defaults/find_features_def.py,sha256=Bcd39uav1BniwKgrsB-I1maF3ljf
 masster/sample/defaults/find_ms2_def.py,sha256=KTELMAnioGLYbhzAwOgK14TZqboPEvzeBN0HC-v0Z5A,9872
 masster/sample/defaults/get_spectrum_def.py,sha256=o62p31PhGd-LiIkTOzKQhwPtnO2AtQDHcPu-O-YoQPs,11460
 masster/sample/defaults/sample_def.py,sha256=keoXyMyrm_iLgbYqfIbqCpJ3XHBVlNwCNmb5iMQL0iY,14579
-masster/study/__init__.py,sha256=OoxY1JtskLSWNL2zzieQb-xW4vWEGpE3nz5fkQyVMsU,165
-masster/study/export.py,sha256=CGiKT-lPBAS-qRt_vosIgFM-pdE6DhCv38wS8aZYKaw,54809
-masster/study/h5.py,sha256=wG9A2mbHdbhkWCfW1J5xRatnwW_lflgmvAdBt_eQTIQ,84057
-masster/study/helpers.py,sha256=Lt3tLRf5yEmUKL5_NqdNIp6lAFCXe_0yEhmQ65ihLfw,152446
-masster/study/helpers_optimized.py,sha256=kKKvcUjRSfvcJBqYyqnCcVvXvVYgffV2mxQgxJRYmsI,13926
-masster/study/id.py,sha256=3mFP2HymkQJ6Hf3oep1P5ti2zgMbimGBLW3ezEnvNzc,44719
-masster/study/load.py,sha256=reIkcM7zDeKK-KkfcOzy2c1Bp2g1h1K1uGaDr04Zvbw,70457
+masster/study/__init__.py,sha256=Zspv6U8jFqjkHGYdNdDy1rfUnCSolCzUdgSSg98PRgE,166
+masster/study/export.py,sha256=OIr2rXFtzE8n8MyO5Azq4eVuju2kzKiIrtNoIBGF-40,54815
+masster/study/h5.py,sha256=7m4-on04e3d0aNPNdSHPqnUXJgHmlzHHYaVHwwRF9Xc,84060
+masster/study/helpers.py,sha256=t6yHmyolRnzJseeFQZTv5GKZ6FMoMczlHMsJnRJsfAk,152455
+masster/study/helpers_optimized.py,sha256=5qf6tiLPgsOSna9XVtTrx2B0GJ1wI8ZTrSv8n8MtxNg,13927
+masster/study/id.py,sha256=EOw-2dM8nnx8QcQF1qAFfGqql75JusONuDBjmAuMU2w,44723
+masster/study/load.py,sha256=-pdBJdC4-vQWG1JSKucZot9XKJMECvHEwaTA1Kmm0JE,70462
 masster/study/parameters.py,sha256=0elaF7YspTsB7qyajWAbRNL2VfKlGz5GJLifmO8IGkk,3276
-masster/study/plot.py,sha256=Ivc5eaWQklr_bXD4LHNKdBxQBbq0grJh_Z6RVxucKZA,93852
-masster/study/processing.py,sha256=d6CxAyIqwWUJhpxgFwnNCd7jSz13swAFTOfpi4h2fxs,73932
-masster/study/save.py,sha256=xCXPw9g_l4Ox9RHNP76c6Z26v1cg4wgP-hQ2-RU74E8,6703
-masster/study/study.py,sha256=7PZYkwi8pZsWoW2rrROPfM0E_Uy-E4MIpX0qibSYydA,34748
+masster/study/plot.py,sha256=VBj1seZGGDJ9KGw8pmjuitn5H_tck1IPWSduWk57m3s,93855
+masster/study/processing.py,sha256=Wmfwzi29kD_u248o0Cc40fgub-RBio483SsTxqwpjAk,73933
+masster/study/save.py,sha256=F_H34zmvxV54Ds64ju90JJLy_F4hg6nRdHhJ9ssWKLA,6704
+masster/study/study.py,sha256=stEyhkQFo2yM2swahFPo4XTbLpklzJ7_xJsu0y1lnuY,34844
 masster/study/study5_schema.json,sha256=06cB473eo_IzzbsT1Q9W4-svNTdgNJhCS86NVpuyySI,7246
 masster/study/defaults/__init__.py,sha256=m3Z5KXGqsTdh7GjYzZoENERt39yRg0ceVRV1DeCt1P0,610
 masster/study/defaults/align_def.py,sha256=hHQbGgsOqMRHHr0Wn8Onr8XeaRz3-fFE0qGE-OMst80,20324
@@ -63,9 +63,9 @@ masster/study/defaults/integrate_chrom_def.py,sha256=0MNIWGTjty-Zu-NTQsIweuj3UVq
 masster/study/defaults/integrate_def.py,sha256=Vf4SAzdBfnsSZ3IRaF0qZvWu3gMDPHdgPfMYoPKeWv8,7246
 masster/study/defaults/merge_def.py,sha256=EBsKE3hsAkTEzN9dpdRD5W3_suTKy_WZ_96rwS0uBuE,8572
 masster/study/defaults/study_def.py,sha256=h8dYbi9xv0sesCSQik49Z53IkskMmNtW6ixl7it5pL0,16033
-masster-0.4.5.dist-info/licenses/LICENSE,sha256=bx5iLIKjgAdYQ7sISn7DsfHRKkoCUm1154sJJKhgqnU,35184
-masster-0.4.5.dist-info/METADATA,sha256=cfxWTY5LDYX3xcgC2oMHjE8W8v3Ljvika5HcKheEY7k,4585
-masster-0.4.5.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-masster-0.4.5.dist-info/entry_points.txt,sha256=ZHguQ_vPmdbpqq2uGtmEOLJfgP-DQ1T0c07Lxh30wc8,58
-masster-0.4.5.dist-info/top_level.txt,sha256=MPZokk6zWIP_UhQ_VkKxSTG63eM4WGu9oTcMpQXp7NI,8
-masster-0.4.5.dist-info/RECORD,,
+masster-0.4.6.dist-info/licenses/LICENSE,sha256=bx5iLIKjgAdYQ7sISn7DsfHRKkoCUm1154sJJKhgqnU,35184
+masster-0.4.6.dist-info/METADATA,sha256=teSd_NJ7grgFyakj2BJgFo4ixrpYSi4FdZQSONMv1Gk,4586
+masster-0.4.6.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+masster-0.4.6.dist-info/entry_points.txt,sha256=ZHguQ_vPmdbpqq2uGtmEOLJfgP-DQ1T0c07Lxh30wc8,58
+masster-0.4.6.dist-info/top_level.txt,sha256=MPZokk6zWIP_UhQ_VkKxSTG63eM4WGu9oTcMpQXp7NI,8
+masster-0.4.6.dist-info/RECORD,,