lunapi 1.2.3__cp310-cp310-macosx_11_0_arm64.whl → 1.3.1__cp310-cp310-macosx_11_0_arm64.whl

lunapi/lunapi0.cpp

@@ -50,6 +50,39 @@ PYBIND11_MODULE(lunapi0, m) {
   m.def( "version" ,
 	 &lunapi_t::version ,
 	 "Version of Luna" );
+
+  m.def( "fetch_doms" ,
+	 &lunapi_t::fetch_doms ,
+	 "Fetch all command domains" );
+  m.def( "fetch_cmds" ,
+	 &lunapi_t::fetch_cmds ,
+	 "Fetch all commands" );
+  m.def( "fetch_params" ,
+	 &lunapi_t::fetch_params ,
+	 "Fetch all parameters for a command" );
+  m.def( "fetch_tbls" ,
+	 &lunapi_t::fetch_tbls ,
+	 "Fetch all tables for a command" );
+  m.def( "fetch_vars" ,
+	 &lunapi_t::fetch_vars ,
+	 "Fetch all variables for a command/table" );
+
+  m.def( "fetch_desc_dom" ,
+         &lunapi_t::fetch_desc_dom ,
+         "Description for a domain" );
+  m.def( "fetch_desc_cmd" ,
+         &lunapi_t::fetch_desc_cmd ,
+         "Description for a command" );
+  m.def( "fetch_desc_param" ,
+         &lunapi_t::fetch_desc_param ,
+         "Description for a command/parameter" );
+  m.def( "fetch_desc_tbl" ,
+         &lunapi_t::fetch_desc_tbl ,
+         "Description for a command/table" );  
+  m.def( "fetch_desc_var" ,
+         &lunapi_t::fetch_desc_var ,
+         "Description for a command/table/variable" );
+
   
   //
   // lunapi_t engine class
@@ -63,6 +96,9 @@ PYBIND11_MODULE(lunapi0, m) {
     .def( "build_sample_list" ,
 	  &lunapi_t::build_sample_list,
 	  "Load a sample list from a file" )
+    .def( "set_sample_list",
+	  &lunapi_t::set_sample_list,
+	  "Set sample list directly" )
     .def( "get_sample_list" ,
           &lunapi_t::sample_list,
           "Return the loaded sample list" )
@@ -77,7 +113,7 @@ PYBIND11_MODULE(lunapi0, m) {
     .def( "is_silenced" , &lunapi_t::is_silenced )
 
     .def( "flush" , &lunapi_t::flush )
-    
+    .def( "reinit" , &lunapi_t::re_init )
     .def( "reset" , &lunapi_t::reset )
     
     .def( "include" ,
@@ -165,6 +201,9 @@ PYBIND11_MODULE(lunapi0, m) {
     
     .def("tables",py::overload_cast<>(&lunapi_t::results,py::const_) ,
 	 "Return a result table (defined by a command/strata pair) from a prior eval()" );
+    
+
+  
   
   //
   // lunapi_inst_t : individual instance (EDF/annotation pair)
@@ -306,6 +345,7 @@ PYBIND11_MODULE(lunapi0, m) {
     .def( "get_time_scale", &segsrv_t::get_time_scale )
     .def( "set_scaling", &segsrv_t::set_scaling )
     .def( "fix_physical_scale", &segsrv_t::fix_physical_scale )
+    .def( "empirical_physical_scale", &segsrv_t::empirical_physical_scale )
     .def( "free_physical_scale", &segsrv_t::free_physical_scale )
     .def( "get_scaled_signal", &segsrv_t::get_scaled_signal )
     .def( "get_gaps" , &segsrv_t::get_gaps )
@@ -341,6 +381,9 @@ PYBIND11_MODULE(lunapi0, m) {
     .def( "compile_evts" , &segsrv_t::compile_evts )
     .def( "get_evnts_xaxes" , &segsrv_t::get_evnts_xaxes )
     .def( "get_evnts_yaxes" , &segsrv_t::get_evnts_yaxes )
+    .def( "set_evnt_format6" , &segsrv_t::set_annot_format6 )
+    .def( "get_evnts_xaxes_ends" , &segsrv_t::get_evnts_xaxes_ends )
+    .def( "get_evnts_yaxes_ends" , &segsrv_t::get_evnts_yaxes_ends )
     .def( "fetch_all_annots", &segsrv_t::fetch_all_evts )
     .def( "fetch_annots" , &segsrv_t::fetch_evts ); 
 

lunapi/lunapi1.py

@@ -1,7 +1,7 @@
 """lunapi1 module: a high-level wrapper around lunapi0 module functions"""
 
 # Luna Python interface (lunapi)
-# v1.2.3, 28-May-2025
+# v1.3.1, 16-Sep-2025
 
 import lunapi.lunapi0 as _luna
 
@@ -33,7 +33,7 @@ class resources:
    POPS_LIB = 's2'
    MODEL_PATH = '/build/luna-models/'
 
-lp_version = "v1.2.3"
+lp_version = "v1.3.1"
    
 # C++ singleton class (engine & sample list)
 # lunapi_t      --> luna
@@ -177,6 +177,10 @@ class proj:
       """ Drop Luna problem flag """
       proj.eng.reset()
 
+   def reinit(self):
+      """ Re-initialize project """
+      proj.eng.reinit()
+
    #------------------------------------------------------------------------
    
    def inst( self, n ):
@@ -1196,6 +1200,47 @@ class inst:
 # --------------------------------------------------------------------------------
 
 
+def fetch_doms():
+   """Fetch all command domains"""
+   return _luna.fetch_doms( True )
+
+def fetch_cmds( dom ):
+   """Fetch all commands"""
+   return _luna.fetch_cmds( dom, True )
+
+def fetch_params( cmd ):
+   """Fetch all command parameters"""
+   return _luna.fetch_params( cmd, True )
+
+def fetch_tbls( cmd ):
+   """Fetch all command tables"""
+   return _luna.fetch_tbls( cmd, True )
+
+def fetch_vars( cmd, tbl ):
+   """Fetch all command/table variables"""
+   return _luna.fetch_vars( cmd, tbl, True )
+
+def fetch_desc_dom( dom ):
+   """Description for a domain"""
+   return _luna.fetch_desc_dom( dom  )
+
+def fetch_desc_cmd( cmd ):
+   """Description for a command"""
+   return _luna.fetch_desc_cmd( cmd )
+
+def fetch_desc_param( cmd , param ):
+   """Description for a command/parameter"""
+   return _luna.fetch_desc_param( cmd, param )
+
+def fetch_desc_tbl( cmd , tbl ):
+   """Description for a command/table"""
+   return _luna.fetch_desc_tbl( cmd, tbl )
+
+def fetch_desc_var( cmd, tbl, var ):
+   """Fetch all command/table variable"""
+   return _luna.fetch_desc_var( cmd, tbl, var )
+
+
 # --------------------------------------------------------------------------------
 def cmdfile( f ):
    """load and parse a Luna command script from a file"""
@@ -1622,8 +1667,8 @@ class segsrv:
    def get_gaps(self):
       return self.segsrv.get_gaps()
 
-   def set_scaling(self, nchs, nanns = 0 , yscale = 1 , ygroup = 1 , yheader = 0.05 , yfooter = 0.05 , scaling_fixed_annot = 0.1 ):
-      self.segsrv.set_scaling( nchs, nanns, yscale, ygroup, yheader, yfooter, scaling_fixed_annot )
+   def set_scaling(self, nchs, nanns = 0 , yscale = 1 , ygroup = 1 , yheader = 0.05 , yfooter = 0.05 , scaling_fixed_annot = 0.1 , clip = True):
+      self.segsrv.set_scaling( nchs, nanns, yscale, ygroup, yheader, yfooter, scaling_fixed_annot , clip )
 
    def get_scaled_signal(self, ch, n1):
       return self.segsrv.get_scaled_signal( ch , n1 )
@@ -1631,8 +1676,11 @@ class segsrv:
    def fix_physical_scale(self,ch,lwr,upr):
       self.segsrv.fix_physical_scale( ch, lwr, upr )
 
+   def empirical_physical_scale(self,ch):
+      self.segsrv.empirical_physical_scale( ch )
+
    def free_physical_scale( self, ch ):
-      self.segsrv.free_physical_scal( ch )
+      self.segsrv.free_physical_scale( ch )
 
    def set_epoch_size( self, s ):
       self.segsrv.set_epoch_size( s )
@@ -1726,6 +1774,14 @@ class segsrv:
    def get_annots_yaxes(self,ann):
       return self.segsrv.get_evnts_yaxes( ann )
 
+   def set_annot_format6(self,b):
+      self.segsrv.set_evnt_format6(b)
+      
+   def get_annots_xaxes_ends(self,ann):
+      return self.segsrv.get_evnts_xaxes_ends( ann )
+
+   def get_annots_yaxes_ends(self,ann):
+      return self.segsrv.get_evnts_yaxes_ends( ann )
 
 
 
@@ -1813,7 +1869,6 @@ def scope( p,
         for key, value in anncols.items(): apalette[ key ] = value
     
 
-
     # define widgets
 
     wlay1 = widgets.Layout( width='95%' ) 
@@ -2180,8 +2235,8 @@ def scope( p,
                 g.data[ gidx ].visible = True
 
     def rescale(change):
-        ss.set_scaling( len(chbox.value) , len( anbox.value) , 2**float(yscale.value) , float(yspace.value) , header_height, footer_height , annot_height )
-        redraw()
+       ss.set_scaling( len(chbox.value) , len( anbox.value) , 2**float(yscale.value) , float(yspace.value) , header_height, footer_height , annot_height )
+       redraw()
     
     def update_bandpower(change):
         if pow_sel.value is None: return 
@@ -2418,7 +2473,7 @@ class moonbeam:
       self.pull_file( self.curr_edf )
 
       # EDFZ .idx
-      if re.search('\.edf\.gz$',self.curr_edf,re.IGNORECASE) or re.search('\.edfz$',self.curr_edf,re.IGNORECASE):
+      if re.search(r'\.edf\.gz$',self.curr_edf,re.IGNORECASE) or re.search(r'\.edfz$',self.curr_edf,re.IGNORECASE):
          self.pull_file( self.curr_edf + '.idx' )
 
       # annots (optional)
@@ -2487,3 +2542,5 @@ class moonbeam:
       df = pd.concat( [ df1 , df2 ] )
       return df
 
+
+

{lunapi-1.2.3.dist-info → lunapi-1.3.1.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: lunapi
-Version: 1.2.3
+Version: 1.3.1
 Summary: Python interface to the Luna toolset for sleep signal analysis
 Keywords: Sleep,EEG,PSG,Luna,Signal processing
 Author-Email: Shaun Purcell <smpurcell@bwh.harvard.edu>, Senthil Palanivelu <spalanivelu@mgh.harvard.edu>, Nataliia Kozhemiako <nkozhemiako@bwh.harvard.edu>

lunapi-1.3.1.dist-info/RECORD

@@ -0,0 +1,8 @@
+lunapi/lunapi0.cpython-310-darwin.so,sha256=hM-QKNCO2UXW5AhuzULNnXwC3o_cUW2vj5ASNSxJsKA,16339216
+lunapi/__init__.py,sha256=cDep9d2N4KKUt81AzHUyFsuRdGwxCD1rqqFmptsAqsk,352
+lunapi/lunapi1.py,sha256=jIXaSl8eazbD3b23Ua-ZRV8-gtj7W75wmoiaDQdbnEY,94080
+lunapi/lunapi0.cpp,sha256=zARcfjSlzyfGkRaOc_SNeFaDPcDpjGWEX3G13jYrwlE,14471
+lunapi-1.3.1.dist-info/RECORD,,
+lunapi-1.3.1.dist-info/WHEEL,sha256=oeaqksGkf-80Owufqv_HTXjJrxDpA_v_U7oZjvUH15Y,114
+lunapi-1.3.1.dist-info/METADATA,sha256=uWaw2hLPqyIKYrSqBxMVk6ij13Q2fSOidrgm6lCYLNc,1519
+lunapi-1.3.1.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149

{lunapi-1.2.3.dist-info → lunapi-1.3.1.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: scikit-build-core 0.11.3
+Generator: scikit-build-core 0.11.6
 Root-Is-Purelib: false
 Tag: cp310-cp310-macosx_11_0_arm64
 

lunapi-1.2.3.dist-info/RECORD

@@ -1,8 +0,0 @@
-lunapi/lunapi0.cpython-310-darwin.so,sha256=otIv4KNde-TJRe4pIpEW-qc7palHhtQ4sW-QmSZzxJo,16112592
-lunapi/__init__.py,sha256=cDep9d2N4KKUt81AzHUyFsuRdGwxCD1rqqFmptsAqsk,352
-lunapi/lunapi1.py,sha256=IBGgPsHM_Wlzv7If4_gli1onM6127MWY_A5UapPHAzU,92537
-lunapi/lunapi0.cpp,sha256=nQ5cwNdm4fvZ5TSDSxrgWu8Luw1r6NyDsvDWu9sLv7I,13053
-lunapi-1.2.3.dist-info/RECORD,,
-lunapi-1.2.3.dist-info/WHEEL,sha256=87YilxMELXSqqZymMWWtrBQ8MObQp3jOwOGXoMbDavg,114
-lunapi-1.2.3.dist-info/METADATA,sha256=CJCsb2ZSt6h8oYb2K_Hx4khWZBrxZQauka_HcDp4O54,1519
-lunapi-1.2.3.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149