lsst-pipe-base 30.0.0rc2__py3-none-any.whl → 30.0.1rc1__py3-none-any.whl

lsst/pipe/base/single_quantum_executor.py

@@ -37,13 +37,13 @@ from typing import Any
 
 from lsst.daf.butler import (
     Butler,
-    ButlerMetrics,
     DatasetRef,
     DatasetType,
     LimitedButler,
     NamedKeyDict,
     Quantum,
 )
+from lsst.daf.butler.logging import ButlerLogRecords
 from lsst.utils.introspection import get_full_type_name
 from lsst.utils.timer import logInfo
 
@@ -59,7 +59,7 @@ from .connections import AdjustQuantumHelper
 from .log_capture import LogCapture, _ExecutionLogRecordsExtra
 from .pipeline_graph import TaskNode
 from .pipelineTask import PipelineTask
-from .quantum_graph_executor import QuantumExecutor
+from .quantum_graph_executor import QuantumExecutionResult, QuantumExecutor
 from .quantum_reports import QuantumReport
 from .task import _TASK_FULL_METADATA_TYPE, _TASK_METADATA_TYPE
 from .taskFactory import TaskFactory
@@ -78,12 +78,12 @@ class SingleQuantumExecutor(QuantumExecutor):
         Instance of a task factory.  Defaults to a new instance of
         `lsst.pipe.base.TaskFactory`.
     skip_existing_in : `str` or `~collections.abc.Iterable` [ `str` ]
-        Expressions representing the collections to search for existing output
-        datasets. See :ref:`daf_butler_ordered_collection_searches` for allowed
-        types. This class only checks for the presence of butler output run in
-        the list of collections. If the output run is present in the list then
-        the quanta whose complete outputs exist in the output run will be
-        skipped. `None` or empty string/sequence disables skipping.
+        A collection name or list of collections to search for the existing
+        outputs of quanta, which indicates that those quanta should be skipped.
+        This class only checks for the presence of butler output run in the
+        list of collections. If the output run is present in the list then the
+        quanta whose complete outputs exist in the output run will be skipped.
+        `None` or empty string/sequence disables skipping.
     clobber_outputs : `bool`, optional
         If `True`, then outputs from a quantum that exist in output run
         collection will be removed prior to executing a quantum. If
@@ -92,7 +92,7 @@ class SingleQuantumExecutor(QuantumExecutor):
         `None`.
     enable_lsst_debug : `bool`, optional
         Enable debugging with ``lsstDebug`` facility for a task.
-    limited_butler_factory : `Callable`, optional
+    limited_butler_factory : `~collections.abc.Callable`, optional
         A method that creates a `~lsst.daf.butler.LimitedButler` instance for a
         given Quantum. This parameter must be defined if ``butler`` is `None`.
         If ``butler`` is not `None` then this parameter is ignored.
@@ -157,21 +157,28 @@ class SingleQuantumExecutor(QuantumExecutor):
         self._previous_process_quanta: list[uuid.UUID] = []
 
     def execute(
-        self, task_node: TaskNode, /, quantum: Quantum, quantum_id: uuid.UUID | None = None
-    ) -> tuple[Quantum, QuantumReport | None]:
+        self,
+        task_node: TaskNode,
+        /,
+        quantum: Quantum,
+        quantum_id: uuid.UUID | None = None,
+        *,
+        log_records: ButlerLogRecords | None = None,
+    ) -> QuantumExecutionResult:
         # Docstring inherited from QuantumExecutor.execute
-        assert quantum.dataId is not None, "Quantum DataId cannot be None"
-
         if self._butler is not None:
             self._butler.registry.refresh()
-
-        result = self._execute(task_node, quantum, quantum_id=quantum_id)
-        report = QuantumReport(quantumId=quantum_id, dataId=quantum.dataId, taskLabel=task_node.label)
-        return result, report
+        return self._execute(task_node, quantum, quantum_id=quantum_id, log_records=log_records)
 
     def _execute(
-        self, task_node: TaskNode, /, quantum: Quantum, quantum_id: uuid.UUID | None = None
-    ) -> Quantum:
+        self,
+        task_node: TaskNode,
+        /,
+        quantum: Quantum,
+        quantum_id: uuid.UUID | None = None,
+        *,
+        log_records: ButlerLogRecords | None = None,
+    ) -> QuantumExecutionResult:
         """Execute the quantum.
 
         Internal implementation of `execute()`.
@@ -189,7 +196,7 @@ class SingleQuantumExecutor(QuantumExecutor):
 
         try:
             return self._execute_with_limited_butler(
-                task_node, limited_butler, quantum=quantum, quantum_id=quantum_id
+                task_node, limited_butler, quantum=quantum, quantum_id=quantum_id, log_records=log_records
             )
         finally:
             if used_butler_factory:
@@ -202,14 +209,17 @@ class SingleQuantumExecutor(QuantumExecutor):
         /,
         quantum: Quantum,
         quantum_id: uuid.UUID | None = None,
-    ) -> Quantum:
+        *,
+        log_records: ButlerLogRecords | None = None,
+    ) -> QuantumExecutionResult:
         startTime = time.time()
-
+        assert quantum.dataId is not None, "Quantum DataId cannot be None"
+        report = QuantumReport(quantumId=quantum_id, dataId=quantum.dataId, taskLabel=task_node.label)
         if self._butler is not None:
             log_capture = LogCapture.from_full(self._butler)
         else:
             log_capture = LogCapture.from_limited(limited_butler)
-        with log_capture.capture_logging(task_node, quantum) as captureLog:
+        with log_capture.capture_logging(task_node, quantum, records=log_records) as captureLog:
             # Save detailed resource usage before task start to metadata.
             quantumMetadata = _TASK_METADATA_TYPE()
             logInfo(None, "prep", metadata=quantumMetadata)  # type: ignore[arg-type]
@@ -228,7 +238,7 @@ class SingleQuantumExecutor(QuantumExecutor):
                     task_node.label,
                     quantum.dataId,
                 )
-                return quantum
+                return QuantumExecutionResult(quantum, report, skipped_existing=True, adjusted_no_work=False)
             captureLog.store = True
 
             captureLog.extra.previous_process_quanta.extend(self._previous_process_quanta)
@@ -244,6 +254,7 @@ class SingleQuantumExecutor(QuantumExecutor):
                     str(exc),
                 )
                 quantumMetadata["caveats"] = QuantumSuccessCaveats.from_adjust_quantum_no_work().value
+                quantumMetadata["outputs"] = []
                 # Make empty metadata that looks something like what a
                 # do-nothing task would write (but we don't bother with empty
                 # nested PropertySets for subtasks).  This is slightly
@@ -256,7 +267,13 @@ class SingleQuantumExecutor(QuantumExecutor):
                 if self._job_metadata is not None:
                     fullMetadata["job"] = self._job_metadata
                 self._write_metadata(quantum, fullMetadata, task_node, limited_butler)
-                return quantum
+                return QuantumExecutionResult(
+                    quantum,
+                    report,
+                    skipped_existing=False,
+                    adjusted_no_work=True,
+                    task_metadata=fullMetadata,
+                )
 
             # enable lsstDebug debugging
             if self._enable_lsst_debug:
@@ -278,10 +295,12 @@ class SingleQuantumExecutor(QuantumExecutor):
             )
             task = self._task_factory.makeTask(task_node, limited_butler, init_input_refs)
             logInfo(None, "start", metadata=quantumMetadata)  # type: ignore[arg-type]
+            outputs_put: list[uuid.UUID] = []
             try:
-                caveats, outputsPut, butler_metrics = self._run_quantum(
-                    task, quantum, task_node, limited_butler, quantum_id=quantum_id
-                )
+                with limited_butler.record_metrics() as butler_metrics:
+                    caveats = self._run_quantum(
+                        task, quantum, task_node, limited_butler, quantum_id=quantum_id, ids_put=outputs_put
+                    )
             except Exception as e:
                 _LOG.error(
                     "Execution of task '%s' on quantum %s failed. Exception %s: %s",
@@ -301,10 +320,10 @@ class SingleQuantumExecutor(QuantumExecutor):
                 quantumMetadata["caveats"] = caveats.value
                 # Stringify the UUID for easier compatibility with
                 # PropertyList.
-                quantumMetadata["outputs"] = [str(output) for output in outputsPut]
             finally:
                 logInfo(None, "end", metadata=quantumMetadata)  # type: ignore[arg-type]
                 fullMetadata = task.getFullMetadata()
+                quantumMetadata["outputs"] = [str(output) for output in outputs_put]
                 fullMetadata["quantum"] = quantumMetadata
                 if self._job_metadata is not None:
                     fullMetadata["job"] = self._job_metadata
@@ -317,7 +336,13 @@ class SingleQuantumExecutor(QuantumExecutor):
                 quantum.dataId,
                 stopTime - startTime,
             )
-        return quantum
+        return QuantumExecutionResult(
+            quantum,
+            report,
+            skipped_existing=False,
+            adjusted_no_work=False,
+            task_metadata=fullMetadata,
+        )
 
     def _check_existing_outputs(
         self,
@@ -519,8 +544,9 @@ class SingleQuantumExecutor(QuantumExecutor):
         task_node: TaskNode,
         /,
         limited_butler: LimitedButler,
-        quantum_id: uuid.UUID | None = None,
-    ) -> tuple[QuantumSuccessCaveats, list[uuid.UUID], ButlerMetrics]:
+        quantum_id: uuid.UUID | None,
+        ids_put: list[uuid.UUID],
+    ) -> QuantumSuccessCaveats:
         """Execute task on a single quantum.
 
         Parameters
@@ -533,18 +559,17 @@ class SingleQuantumExecutor(QuantumExecutor):
             Task definition structure.
         limited_butler : `~lsst.daf.butler.LimitedButler`
             Butler to use for dataset I/O.
-        quantum_id : `uuid.UUID` or `None`, optional
+        quantum_id : `uuid.UUID` or `None`
             ID of the quantum being executed.
+        ids_put : list[ `uuid.UUID` ]
+            List to be populated with the dataset IDs that were written by this
+            quantum.  This is an output parameter in order to allow it to be
+            populated even when an exception is raised.
 
         Returns
         -------
         flags : `QuantumSuccessCaveats`
             Flags that describe qualified successes.
-        ids_put : list[ `uuid.UUID` ]
-            Record of all the dataset IDs that were written by this quantum
-            being executed.
-        metrics : `lsst.daf.butler.ButlerMetrics`
-            Butler metrics recorded for this quantum.
         """
         flags = QuantumSuccessCaveats.NO_CAVEATS
 
@@ -556,8 +581,7 @@ class SingleQuantumExecutor(QuantumExecutor):
 
         # Call task runQuantum() method.
         try:
-            with limited_butler.record_metrics() as butler_metrics:
-                task.runQuantum(butlerQC, inputRefs, outputRefs)
+            task.runQuantum(butlerQC, inputRefs, outputRefs)
         except NoWorkFound as err:
             # Not an error, just an early exit.
             _LOG.info(
@@ -595,12 +619,13 @@ class SingleQuantumExecutor(QuantumExecutor):
                 )
                 _LOG.error(error, exc_info=error)
                 flags |= caught.FLAGS
+        finally:
+            ids_put.extend(output[2] for output in butlerQC.outputsPut)
         if not butlerQC.outputsPut:
             flags |= QuantumSuccessCaveats.ALL_OUTPUTS_MISSING
         if not butlerQC.outputsPut == butlerQC.allOutputs:
             flags |= QuantumSuccessCaveats.ANY_OUTPUTS_MISSING
-        ids_put = [output[2] for output in butlerQC.outputsPut]
-        return flags, ids_put, butler_metrics
+        return flags
 
     def _write_metadata(
         self, quantum: Quantum, metadata: Any, task_node: TaskNode, /, limited_butler: LimitedButler

lsst/pipe/base/struct.py

@@ -116,6 +116,10 @@ class Struct(SimpleNamespace):
         *nameList : `str`
             All remaining arguments are names of items to copy.
 
+        Returns
+        -------
+        None
+
         Raises
         ------
         RuntimeError

lsst/pipe/base/testUtils.py

@@ -341,7 +341,7 @@ def _assertAttributeMatchesConnection(obj: Any, attrName: str, connection: BaseC
 
     Raises
     ------
-    AssertionError:
+    AssertionError
         Raised if ``obj.attrName`` does not match what's expected
         from ``connection``.
     """
@@ -379,7 +379,7 @@ def assertValidOutput(task: PipelineTask, result: Struct) -> None:
 
     Raises
     ------
-    AssertionError:
+    AssertionError
         Raised if ``result`` does not match what's expected from ``task's``
         connections.
     """
@@ -402,7 +402,7 @@ def assertValidInitOutput(task: PipelineTask) -> None:
 
     Raises
     ------
-    AssertionError:
+    AssertionError
         Raised if ``task`` does not have the state expected from ``task's``
         connections.
     """

lsst/pipe/base/tests/mocks/_storage_class.py

@@ -381,7 +381,8 @@ MockDataset.model_rebuild()
 
 
 class MockStorageClassDelegate(StorageClassDelegate):
-    """Implementation of the StorageClassDelegate interface for mock datasets.
+    """Implementation of the `~lsst.daf.butler.StorageClassDelegate` interface
+    for mock datasets.
 
     This class does not implement assembly and disassembly just because it's
     not needed right now.  That could be added in the future with some

lsst/pipe/base/version.py

@@ -1,2 +1,2 @@
 __all__ = ["__version__"]
-__version__ = "30.0.0rc2"
+__version__ = "30.0.1rc1"

{lsst_pipe_base-30.0.0rc2.dist-info → lsst_pipe_base-30.0.1rc1.dist-info}/METADATA

@@ -1,20 +1,20 @@
 Metadata-Version: 2.4
 Name: lsst-pipe-base
-Version: 30.0.0rc2
+Version: 30.0.1rc1
 Summary: Pipeline infrastructure for the Rubin Science Pipelines.
 Author-email: Rubin Observatory Data Management <dm-admin@lists.lsst.org>
 License-Expression: BSD-3-Clause OR GPL-3.0-or-later
 Project-URL: Homepage, https://github.com/lsst/pipe_base
+Project-URL: Source, https://github.com/lsst/pipe_base
 Keywords: lsst
 Classifier: Intended Audience :: Science/Research
 Classifier: Operating System :: OS Independent
 Classifier: Programming Language :: Python :: 3
-Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
 Classifier: Programming Language :: Python :: 3.13
 Classifier: Programming Language :: Python :: 3.14
 Classifier: Topic :: Scientific/Engineering :: Astronomy
-Requires-Python: >=3.11.0
+Requires-Python: >=3.12.0
 Description-Content-Type: text/markdown
 License-File: COPYRIGHT
 License-File: LICENSE

lsst_pipe_base-30.0.1rc1.dist-info/RECORD

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