lsst-pipe-base 29.2025.4100__py3-none-any.whl → 29.2025.4300__py3-none-any.whl

lsst/pipe/base/resource_usage.py

@@ -0,0 +1,183 @@
+# This file is part of pipe_base.
+#
+# Developed for the LSST Data Management System.
+# This product includes software developed by the LSST Project
+# (http://www.lsst.org).
+# See the COPYRIGHT file at the top-level directory of this distribution
+# for details of code ownership.
+#
+# This software is dual licensed under the GNU General Public License and also
+# under a 3-clause BSD license. Recipients may choose which of these licenses
+# to use; please see the files gpl-3.0.txt and/or bsd_license.txt,
+# respectively.  If you choose the GPL option then the following text applies
+# (but note that there is still no warranty even if you opt for BSD instead):
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program.  If not, see <http://www.gnu.org/licenses/>.
+
+from __future__ import annotations
+
+__all__ = ("QuantumResourceUsage",)
+
+import datetime
+
+import numpy as np
+import pydantic
+
+from ._task_metadata import TaskMetadata
+
+
+class QuantumResourceUsage(pydantic.BaseModel):
+    """A struct holding the most frequently used resource usage metrics for
+    executed quanta.
+    """
+
+    memory: float = pydantic.Field(json_schema_extra={"unit": "byte"})
+    """Maximum memory usage of the process that ran this quantum, in bytes.
+
+    This is derived from the maximum resident set size at the end of the
+    quantum's execution, and is expected to only grow as multiple quanta are
+    executed in the same process; that makes this a lower bound on the actual
+    memory use of any particular quantum.
+    """
+
+    start: datetime.datetime
+    """Start time (UTC), corresponding to the beginning of the "prep" period.
+    """
+
+    prep_time: float = pydantic.Field(json_schema_extra={"unit": "s"})
+    """Wall-clock time in seconds spent preparing for the execution of this
+    quantum.
+
+    This includes checking for existing inputs, outputs, clobbering when
+    necessary, and running the `..PipelineTaskConnections.adjustQuantum` hook.
+    It does not include process startup times, import times, or butler
+    initialization overheads.
+    """
+
+    init_time: float = pydantic.Field(json_schema_extra={"unit": "s"})
+    """Wall-clock time in seconds spent initializing the task used to run this
+    quantum.
+
+    This includes the time spent reading init-inputs.
+    """
+
+    run_time: float = pydantic.Field(json_schema_extra={"unit": "s"})
+    """Wall-clock time in seconds spent executing this quantum.
+
+    This includes time spent reading inputs and writing outputs.  It does not
+    include the time spent writing the special log and metadata datasets.
+    """
+
+    run_time_cpu: float = pydantic.Field(json_schema_extra={"unit": "s"})
+    """CPU time in seconds spent executing this quantum.
+
+    This includes time spent reading inputs and writing outputs, to the extent
+    that those operations actually spend CPU time at all.  It does not include
+    the time spent writing the special log and metadata datasets.
+    """
+
+    @property
+    def total_time(self) -> float:
+        """Total wall-clock time spent in "prep", "init", and "run"."""
+        return self.prep_time + self.init_time + self.run_time
+
+    @property
+    def end(self) -> datetime.datetime:
+        """End time (UTC), corresponding to the end of the "run" period."""
+        return self.start + datetime.timedelta(seconds=self.total_time)
+
+    @classmethod
+    def from_task_metadata(cls, metadata: TaskMetadata) -> QuantumResourceUsage | None:
+        """Extract resource usage information from task metadata.
+
+        Parameters
+        ----------
+        metadata : `TaskMetadata`
+            Metadata written by
+            `.single_quantum_executor.SingleQuantumExecutor`.
+
+        Returns
+        -------
+        resource_usage : `QuantumResourceUsage` or `None`
+            Resource usage information for this quantum, or `None` if the
+            expected fields were not found.
+        """
+        try:
+            quantum_metadata = metadata["quantum"]
+        except KeyError:
+            return None
+        end = datetime.datetime.fromisoformat(quantum_metadata["endUtc"])
+        start = datetime.datetime.fromisoformat(quantum_metadata["prepUtc"])
+        try:
+            start_init = datetime.datetime.fromisoformat(quantum_metadata["initUtc"])
+        except KeyError:
+            start_init = end
+        try:
+            start_run = datetime.datetime.fromisoformat(quantum_metadata["startUtc"])
+        except KeyError:
+            start_run = end
+        try:
+            run_time_cpu = quantum_metadata["endCpuTime"] - quantum_metadata["startCpuTime"]
+        except KeyError:
+            run_time_cpu = 0.0
+        return cls(
+            memory=quantum_metadata["endMaxResidentSetSize"],
+            start=start,
+            prep_time=(start_init - start).total_seconds(),
+            init_time=(start_run - start_init).total_seconds(),
+            run_time=(end - start_run).total_seconds(),
+            run_time_cpu=run_time_cpu,
+        )
+
+    @staticmethod
+    def get_numpy_fields() -> dict[str, np.dtype]:
+        """Return a mapping from field name to the `numpy.dtype` for that
+        field.
+        """
+        return {
+            "memory": np.dtype(np.float32),
+            "start": np.dtype(np.float64),
+            "prep_time": np.dtype(np.float32),
+            "init_time": np.dtype(np.float32),
+            "run_time": np.dtype(np.float32),
+            "run_time_cpu": np.dtype(np.float32),
+        }
+
+    @staticmethod
+    def get_units() -> dict[str, str | None]:
+        """Return a mapping from field name to units.
+
+        Units are astropy-compatible strings.
+        """
+        return {
+            "memory": "byte",
+            "start": "s",
+            "prep_time": "s",
+            "init_time": "s",
+            "run_time": "s",
+            "run_time_cpu": "s",
+        }
+
+    def get_numpy_row(self) -> tuple[object, ...]:
+        """Convert this object to a `tuple` that can used to initialize a
+        NumPy structured array with the fields from `get_numpy_fields`.
+        """
+        return (
+            self.memory,
+            self.start.timestamp(),
+            self.prep_time,
+            self.init_time,
+            self.run_time,
+            self.run_time_cpu,
+        )

lsst/pipe/base/simple_pipeline_executor.py

@@ -667,7 +667,10 @@ class SimplePipelineExecutor:
             Butler to transfer records to.
         """
         assert self.predicted.dimension_data is not None, "Dimension data must be present for execution."
-        for record_set in self.predicted.dimension_data.records.values():
+        records = self.predicted.dimension_data.records
+        dimensions = out_butler.dimensions.sorted(records.keys())
+        for dimension in dimensions:
+            record_set = records[dimension.name]
             if record_set and record_set.element.has_own_table:
                 out_butler.registry.insertDimensionData(
                     record_set.element,

lsst/pipe/base/tests/util.py

@@ -29,6 +29,13 @@
 
 from __future__ import annotations
 
+__all__ = ("check_output_run", "patch_deterministic_uuid4")
+
+import random
+import uuid
+from collections.abc import Iterator
+from contextlib import contextmanager
+
 from lsst.daf.butler import DatasetRef
 
 from ..graph import QuantumGraph
@@ -111,3 +118,27 @@ def get_output_refs(graph: QuantumGraph) -> list[DatasetRef]:
             result += [ref for ref in init_refs if ref in output_refs]
 
     return result
+
+
+@contextmanager
+def patch_deterministic_uuid4(seed: int) -> Iterator[None]:
+    """Return a context manager that replaces the standard library's
+    `uuid.uuid4` function with one that generates random numbers with a
+    deterministic sequence.
+
+    Parameters
+    ----------
+    seed : `int
+        Integer seed for the random number generator.
+    """
+    random.seed(seed)
+    original = uuid.uuid4
+    uuid.uuid4 = _deterministic_uuid
+    try:
+        yield
+    finally:
+        uuid.uuid4 = original
+
+
+def _deterministic_uuid() -> uuid.UUID:
+    return uuid.UUID(int=random.getrandbits(128))

lsst/pipe/base/version.py

@@ -1,2 +1,2 @@
 __all__ = ["__version__"]
-__version__ = "29.2025.4100"
+__version__ = "29.2025.4300"

{lsst_pipe_base-29.2025.4100.dist-info → lsst_pipe_base-29.2025.4300.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: lsst-pipe-base
-Version: 29.2025.4100
+Version: 29.2025.4300
 Summary: Pipeline infrastructure for the Rubin Science Pipelines.
 Author-email: Rubin Observatory Data Management <dm-admin@lists.lsst.org>
 License: BSD 3-Clause License

{lsst_pipe_base-29.2025.4100.dist-info → lsst_pipe_base-29.2025.4300.dist-info}/RECORD

@@ -6,7 +6,7 @@ lsst/pipe/base/_dataset_handle.py,sha256=ft_ke1LbhLLndDPARsHSQJUA05LgUFnfWOq2vbw
 lsst/pipe/base/_instrument.py,sha256=I9UTaj81krR1zkTZ1owfOPBzHN29PY3Egg7fIE5obxQ,30057
 lsst/pipe/base/_observation_dimension_packer.py,sha256=78Jg2OVFOdXIK62TS2Y3X4095xqCzmiIx9o4TXyADYA,8027
 lsst/pipe/base/_quantumContext.py,sha256=gb60mTHbgOIEptYvJ64SaChvViXyeKJlG6kEHq4nYVw,19345
-lsst/pipe/base/_status.py,sha256=tvKm-z_haZGksOR4nQ-ePJgbLag-e3t4nQY47yLFP2M,15741
+lsst/pipe/base/_status.py,sha256=AoCyee9zS1c3SOi38fO8BCQ28fn3JhwDSjYHhQY_ANA,15740
 lsst/pipe/base/_task_metadata.py,sha256=Y4rjrYWvYxYCJwy86VvzxKMkNxEJbYVgLVuXo6KiXac,25638
 lsst/pipe/base/all_dimensions_quantum_graph_builder.py,sha256=nazY74jrdSCr6CFfPp78JecM_-udW95EYP7grLPO2hg,70830
 lsst/pipe/base/automatic_connection_constants.py,sha256=H5uuh1rYRpjndgPdb0dh1L_-OyLKdT6VWOZTAb__xCU,3298
@@ -19,7 +19,7 @@ lsst/pipe/base/dot_tools.py,sha256=vriWMaB8YTEKKvhJE5KYdVGE4gB5XmiYfD2f18Fue-c,4
 lsst/pipe/base/exec_fixup_data_id.py,sha256=9OjOcH-6AHZ1JnD_CemieI0wWX90J_VdaY9v1oXwMdQ,4187
 lsst/pipe/base/execution_graph_fixup.py,sha256=ND0x4hlpeEW-gudo-i2K7HT7MoM5sp_mcoqRMCopSqQ,3815
 lsst/pipe/base/execution_reports.py,sha256=jYtWCD4PkEAeVUpKIxuiJJVgsCm7qiwCorWVgNHkVgU,17270
-lsst/pipe/base/graph_walker.py,sha256=7dOx3V7thYr6eN29GRbkudV9Y8249ojDQUlnW2JHtg8,4486
+lsst/pipe/base/graph_walker.py,sha256=Ij7JfYF0srA29VgM_DhbNBxUBeOHDOnujrTQPjVNha0,4694
 lsst/pipe/base/log_capture.py,sha256=LylLrxPJyMxU90uSQ15PqFhObDSLWQWGKX6NuXOuwXA,9504
 lsst/pipe/base/mermaid_tools.py,sha256=cdlDJQ1x8k7-VvCLEUqvSC3GR1zCsB-aUTxOjYejNWc,5216
 lsst/pipe/base/mp_graph_executor.py,sha256=FKlFxjtU2-6SFzX_wsdtMMAj5P09ZE8V65-Sg585g2Y,35501
@@ -33,19 +33,20 @@ lsst/pipe/base/quantum_graph_executor.py,sha256=WP41iQmihy1jfgaHV6eu2aSrqQx_Fydq
 lsst/pipe/base/quantum_graph_skeleton.py,sha256=GhSQjRHaErneGY4A4E0tERqg9QPEeYrlpmdLzqFXy6E,28586
 lsst/pipe/base/quantum_provenance_graph.py,sha256=SChke6lcSzQQQMbVN_mCZ-RxDj7chehjJrSMvXRuhAI,93372
 lsst/pipe/base/quantum_reports.py,sha256=ut235L88v7SXaeVUvMA9qFl7tpeMwGnzob3X0QoOI_s,14210
+lsst/pipe/base/resource_usage.py,sha256=LfH7Qf6taI3lxw0aB90riRMn1UxUTMBSqtBjKPJ-XuY,6759
 lsst/pipe/base/separable_pipeline_executor.py,sha256=vXqJrRI5GNezzGV9QsiaRHEhioDF2Y_W7JQYQCzHR7A,16720
-lsst/pipe/base/simple_pipeline_executor.py,sha256=xYxaCJOorzy5RFXprzOZX8HtSGbd6Ir_nhqLnHr9FBM,29409
+lsst/pipe/base/simple_pipeline_executor.py,sha256=QjgX5seueopxPpnJz7H2hBNx-8ucxeT-3BXj6ET_vww,29543
 lsst/pipe/base/single_quantum_executor.py,sha256=YWzLJDTRlvMwmtjsIW7XXZEUlLlv7ize-Oxb_0eKTrI,26667
 lsst/pipe/base/struct.py,sha256=Fa-UkpuXOxdzKWbHrMUkJYOszZuBXCm2NesXNR0IOPQ,5048
 lsst/pipe/base/task.py,sha256=XHBd-7m1a4-6LgobBYA1DgY4H7EV-_RWKfxbhZbMmD4,15145
 lsst/pipe/base/taskFactory.py,sha256=MsDGECJqZLSZk8SGhpuVhNaP32UWuNvxZiDcZExPFG8,3412
 lsst/pipe/base/testUtils.py,sha256=lSBKMhoKflbi8JkMNYfEqqHNl-rtFI8UYT3QneDYpLo,18477
 lsst/pipe/base/utils.py,sha256=JmEt3l0xrh9uayKrSXuQEq12aXOhDr2YXmbYduaxCko,1940
-lsst/pipe/base/version.py,sha256=imQpc8l8n1Xj3guWKoFaXrBR3HnAY8jkMITBuZx-5DA,55
+lsst/pipe/base/version.py,sha256=pmH-QwBOGm7hpNEwNmgwgFuJ9J8NNZQ81N3RGqBJ3YU,55
 lsst/pipe/base/cli/__init__.py,sha256=861tXIAW7SqtqNUYkjbeEdfg8lDswXsjJQca0gVCFz4,54
 lsst/pipe/base/cli/_get_cli_subcommands.py,sha256=g_af64klRybBGKAg7fmBSZBdw2LYBAsFON_yQIMZON0,1289
-lsst/pipe/base/cli/cmd/__init__.py,sha256=BGicstnryQ48rYcNRh4fa6Vy63ZIlZ_pPAEa17jhkwY,1519
-lsst/pipe/base/cli/cmd/commands.py,sha256=t91PZoIQwgstzONNbqpFJMWpaxeHesVP6EtgkMJYrcE,5612
+lsst/pipe/base/cli/cmd/__init__.py,sha256=3UF2IQEEBor4YMGRNPdcZAVCAI5yFyeHp5nGul4IoyM,1557
+lsst/pipe/base/cli/cmd/commands.py,sha256=ilwKms1Gq4vc6Mddz3MB0fFcgWidseZeYlxTrOQlg8Q,9743
 lsst/pipe/base/cli/opt/__init__.py,sha256=DN17wUbMwNIgbDBfF35sdyGfaMT81f3b_CA5Pp8POdk,1347
 lsst/pipe/base/cli/opt/arguments.py,sha256=9LhDnsM98_2zOqqm-eyv_nnZmAQcBG5OpHzeJYw_eTw,1484
 lsst/pipe/base/cli/opt/options.py,sha256=d5mC2WXZJiUbkdaIo_VUsvNxShD3GmredbEN5jQD64Q,1900
@@ -65,7 +66,7 @@ lsst/pipe/base/pipeline_graph/_edges.py,sha256=n6iCYql-TvAyM1xrINt7m02efjebJlIwh
 lsst/pipe/base/pipeline_graph/_exceptions.py,sha256=3jvCXms0_5ThLGtsOlKxsI1vWiq3gY4hba8fRBW0tgI,3943
 lsst/pipe/base/pipeline_graph/_mapping_views.py,sha256=9nLKPA8j7sS09haShbJnEtGXbb4vy_cWpbLeMLBmVvs,9194
 lsst/pipe/base/pipeline_graph/_nodes.py,sha256=GGXfzXvrjNbwPt-0w8cC0l_I6CCNskoDNjA8Ds4ILS0,4236
-lsst/pipe/base/pipeline_graph/_pipeline_graph.py,sha256=G-P3r-AHBM1cMP7ex75M-Xtu4HlQiaIqly3er6BZC0A,121536
+lsst/pipe/base/pipeline_graph/_pipeline_graph.py,sha256=V5xvlH0VxPsSctWYD5kDT-HybfZqYjMtnZi6n48GEM4,122536
 lsst/pipe/base/pipeline_graph/_task_subsets.py,sha256=lLvcndSGcZigteWd4eeAM8LxQ1lHPBoysY8PjJTxx1c,13244
 lsst/pipe/base/pipeline_graph/_tasks.py,sha256=jTLpm5dZMXRNrGi3L45-3DtF95PGwhmejWLZ-zcSTzo,42802
 lsst/pipe/base/pipeline_graph/expressions.py,sha256=MZ0qxGA4ctu_WqVjdjjezZF8Jd5174PWbio7EF2wdl0,7717
@@ -80,11 +81,21 @@ lsst/pipe/base/pipeline_graph/visualization/_options.py,sha256=vOIp2T7DLA48lTm5m
 lsst/pipe/base/pipeline_graph/visualization/_printer.py,sha256=yJMRJ-aXd3nYDgs1FqS2l_hzNbQ50HUVm55VVaNi71s,16537
 lsst/pipe/base/pipeline_graph/visualization/_show.py,sha256=lPRjO1To2n5r3f_Wgcwy-7TmyJ7UszGGFXAlOtN1wDs,10510
 lsst/pipe/base/pipeline_graph/visualization/_status_annotator.py,sha256=dp7PXl9Cu7GfWjBi5g8KjXZgnF1KGg_idKKxtICL53Q,8679
-lsst/pipe/base/quantum_graph/__init__.py,sha256=rPvhjKcnPisHsJ1-PbyASSmyaxzw55nGYi4ZKI5LO84,1410
-lsst/pipe/base/quantum_graph/_common.py,sha256=PKYd7YsFCB7dW-WBlUVRmQEpt4rNKEfJmKL0SgFwd-M,22138
-lsst/pipe/base/quantum_graph/_multiblock.py,sha256=Y99r4yDAuxmf_YfXbHfBXVmMnKxmIBvOp9NPztlZqE8,27488
-lsst/pipe/base/quantum_graph/_predicted.py,sha256=_yp2mth3j0BC6lB4s_wk-atQ-scenoGxhiHD5qSb5e0,86013
+lsst/pipe/base/quantum_graph/__init__.py,sha256=-Gp3LihB0AXCvhG387wKAEpHRM-NrHGSXMti8cHee90,1437
+lsst/pipe/base/quantum_graph/_common.py,sha256=8WnQ5OD4LCz9i5xEWBlo3D3P7gfVRTYAxOkn0mbRvjE,22167
+lsst/pipe/base/quantum_graph/_multiblock.py,sha256=FQa8lafbuS4sD1rZE_ivQb-WTiHZkOol0OGCHNbTpq8,29125
+lsst/pipe/base/quantum_graph/_predicted.py,sha256=FHLqcEBBuJmIf_3eEUMdBNm70t9DvDWaxGp8bHTWJSA,88056
+lsst/pipe/base/quantum_graph/_provenance.py,sha256=zb7YXiIYnLPYaej9f9tl8aW8wtxow3YT79yk1vdErQg,48554
 lsst/pipe/base/quantum_graph/visualization.py,sha256=EbTWhk9aPq7sX6bcHmnEIsr2xuuR6d1SxspQbRe8D0Q,12235
+lsst/pipe/base/quantum_graph/aggregator/__init__.py,sha256=4CK8sP_ZjUKmxKS3LnCH1zG7XSk9IEwijrluRBHhEMU,7436
+lsst/pipe/base/quantum_graph/aggregator/_communicators.py,sha256=QERfDavbc_3dcRizrTtKtDha647aMBhFt74bH6N36QA,36375
+lsst/pipe/base/quantum_graph/aggregator/_config.py,sha256=iV1Ejfk-UnFoQ8TkpJE_jMZYHsmZcdLm5R-FnQEqO7s,5167
+lsst/pipe/base/quantum_graph/aggregator/_ingester.py,sha256=ohZOfQi9VL7fHEn_P84NOaSYvbzeDZIvk71UWL7ZHnY,13746
+lsst/pipe/base/quantum_graph/aggregator/_progress.py,sha256=D0PrjwdJTuPvgQwLeD90nocMgrNnSzkeQmXcvPFV7jc,7155
+lsst/pipe/base/quantum_graph/aggregator/_scanner.py,sha256=EcglaQBMjVxEJyikBAfCOvoqta6fMjKmtZGAOtgjNJE,15412
+lsst/pipe/base/quantum_graph/aggregator/_structs.py,sha256=nn7CVzYPFLZmCOeZhf47H8CIszUL0x3dNgUbGHazpl4,5475
+lsst/pipe/base/quantum_graph/aggregator/_supervisor.py,sha256=HoBAm1ojovpoIvl4KZKCOzSp1BF4YFZLtU8skUFX4O4,9287
+lsst/pipe/base/quantum_graph/aggregator/_writer.py,sha256=u6YubtNiLjFkvH5grQ94Y9ZU9rKUAtK77y07qh5EIo8,24679
 lsst/pipe/base/script/__init__.py,sha256=cLEXE7aq5UZ0juL_ScmRw0weFgp4tDgwEX_ts-NEYic,1522
 lsst/pipe/base/script/register_instrument.py,sha256=TRC2r2tSoYBNWNVQya01ELxAtGH8WVk9Ya-uNgCIL5U,2426
 lsst/pipe/base/script/retrieve_artifacts_for_quanta.py,sha256=pYI0wNl5PU8ImgzWfGEDrRz3PSKSg2szWLEIVKdm7Og,3939
@@ -96,19 +107,19 @@ lsst/pipe/base/tests/in_memory_limited_butler.py,sha256=UzLh416H67nCUhD9y3cniAAj
 lsst/pipe/base/tests/no_dimensions.py,sha256=58UpyRN8cLAMZtkOmjTm3dJZyRFRekotQ-7-OgEfiAI,4710
 lsst/pipe/base/tests/pipelineStepTester.py,sha256=KGxdB8gdVpSey2RUGURDIzIfPL-4qvQCsBpMrhG4Z2M,7208
 lsst/pipe/base/tests/simpleQGraph.py,sha256=WHphpVvOA9eSbVtUp884wjk4g6ppFLM7gnddDYSwnTc,19862
-lsst/pipe/base/tests/util.py,sha256=eWuIRz55HYgNmMkexinN9HjUFmPC3uapO8jMjcQY-ao,4010
+lsst/pipe/base/tests/util.py,sha256=IXpZOC58fdRnurB5lPcNX-xRgKEV-cPNkWKJDFIr1gs,4772
 lsst/pipe/base/tests/mocks/__init__.py,sha256=fDy9H9vRAIBpKDJEXNZuDWJMzWZfpcBT4TmyOw4o-RY,1572
 lsst/pipe/base/tests/mocks/_data_id_match.py,sha256=v33QZhZm-srXZAXZ8NbNKGN-_ql4AzaArBUk1lxhyss,7474
 lsst/pipe/base/tests/mocks/_pipeline_task.py,sha256=_n16lDsk3ItWi2J28Qheuqphr4aaCK6CN9acmJ1hAqI,30692
 lsst/pipe/base/tests/mocks/_repo.py,sha256=OTJw_fi37w7bkZbbLa7z51W-45zxySAnLbV7Qv_aSB4,27423
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