lsst-ctrl-mpexec 29.2025.3900__py3-none-any.whl → 29.2025.4000__py3-none-any.whl

lsst/ctrl/mpexec/_pipeline_graph_factory.py

@@ -45,18 +45,30 @@ class PipelineGraphFactory:
         dimension schema.
     select_tasks : `str`, optional
         String expression that filters the tasks in the pipeline graph.
+    pipeline_graph : `lsst.pipe.base.pipeline_graph.PipelineGraph`, optional
+        Already-constructed pipeline graph.
     """
 
-    def __init__(self, pipeline: Pipeline, butler: Butler | None = None, select_tasks: str = ""):
+    def __init__(
+        self,
+        pipeline: Pipeline | None = None,
+        butler: Butler | None = None,
+        select_tasks: str = "",
+        *,
+        pipeline_graph: PipelineGraph | None = None,
+    ):
+        if pipeline is None and pipeline_graph is None:
+            raise TypeError("At least one of 'pipeline' and 'pipeline_graph' must not be `None`.")
         self._pipeline = pipeline
         self._registry = butler.registry if butler is not None else None
         self._select_tasks = select_tasks
-        self._pipeline_graph: PipelineGraph | None = None
+        self._pipeline_graph: PipelineGraph | None = pipeline_graph
         self._resolved: bool = False
         self._for_visualization_only: bool = False
 
     def __call__(self, *, resolve: bool = True, visualization_only: bool = False) -> PipelineGraph:
         if self._pipeline_graph is None:
+            assert self._pipeline is not None, "Guaranteed at construction."
             self._pipeline_graph = self._pipeline.to_graph()
             if self._select_tasks:
                 self._pipeline_graph = self._pipeline_graph.select(self._select_tasks)
@@ -71,6 +83,8 @@ class PipelineGraphFactory:
     @property
     def pipeline(self) -> Pipeline:
         """The original pipeline definition."""
+        if self._pipeline is None:
+            raise RuntimeError("Cannot obtain pipeline from pipeline graph.")
         if self._select_tasks:
             raise RuntimeError(
                 "The --select-tasks option cannot be used with operations that return or display a "
@@ -79,4 +93,8 @@ class PipelineGraphFactory:
         return self._pipeline
 
     def __bool__(self) -> bool:
-        return bool(self._pipeline)
+        if self._pipeline is not None:
+            return bool(self._pipeline)
+        else:
+            assert self._pipeline_graph is not None, "Guaranteed at construction."
+            return bool(self._pipeline_graph.tasks)

lsst/ctrl/mpexec/cli/cmd/commands.py

@@ -35,25 +35,22 @@ from typing import Any
 
 import click
 
-import lsst.pipe.base.cli.opt as pipeBaseOpts
 from lsst.ctrl.mpexec.showInfo import ShowInfo
 from lsst.daf.butler.cli.opt import (
     collections_option,
-    config_file_option,
-    config_option,
     confirm_option,
     options_file_option,
     processes_option,
     repo_argument,
     where_option,
 )
-from lsst.daf.butler.cli.utils import MWCtxObj, catch_and_exit, option_section, unwrap
+from lsst.daf.butler.cli.utils import catch_and_exit, option_section, unwrap
 from lsst.pipe.base.quantum_reports import Report
 
 from .. import opt as ctrlMpExecOpts
 from .. import script
 from ..script import confirmable
-from ..utils import PipetaskCommand, makePipelineActions
+from ..utils import PipetaskCommand, collect_pipeline_actions
 
 epilog = unwrap(
     """Notes:
@@ -69,41 +66,6 @@ ignored.)
 )
 
 
-def _collectActions(ctx: click.Context, **kwargs: Any) -> dict[str, Any]:
-    """Extract pipeline building options, replace them with PipelineActions,
-    return updated `kwargs`.
-
-    Notes
-    -----
-    The pipeline actions (task, delete, config, config_file, and instrument)
-    must be handled in the order they appear on the command line, but the CLI
-    specification gives them all different option names. So, instead of using
-    the individual action options as they appear in kwargs (because
-    invocation order can't be known), we capture the CLI arguments by
-    overriding `click.Command.parse_args` and save them in the Context's
-    `obj` parameter. We use `makePipelineActions` to create a list of
-    pipeline actions from the CLI arguments and pass that list to the script
-    function using the `pipeline_actions` kwarg name, and remove the action
-    options from kwargs.
-    """
-    for pipelineAction in (
-        ctrlMpExecOpts.task_option.name(),
-        ctrlMpExecOpts.delete_option.name(),
-        config_option.name(),
-        config_file_option.name(),
-        pipeBaseOpts.instrument_option.name(),
-    ):
-        kwargs.pop(pipelineAction)
-
-    actions = makePipelineActions(MWCtxObj.getFrom(ctx).args)
-    pipeline_actions = []
-    for action in actions:
-        pipeline_actions.append(action)
-
-    kwargs["pipeline_actions"] = pipeline_actions
-    return kwargs
-
-
 def _unhandledShow(show: ShowInfo, cmd: str) -> None:
     if show.unhandled:
         print(
@@ -125,7 +87,7 @@ def build(ctx: click.Context, **kwargs: Any) -> None:
 
     This does not require input data to be specified.
     """
-    kwargs = _collectActions(ctx, **kwargs)
+    kwargs = collect_pipeline_actions(ctx, **kwargs)
     show = ShowInfo(kwargs.pop("show", []))
     if kwargs.get("butler_config") is not None and (
         {"pipeline-graph", "task-graph"}.isdisjoint(show.commands) and not kwargs.get("pipeline_dot")
@@ -187,7 +149,7 @@ concurrency = multiprocessing
 @catch_and_exit
 def qgraph(ctx: click.Context, **kwargs: Any) -> None:
     """Build and optionally save quantum graph."""
-    kwargs = _collectActions(ctx, **kwargs)
+    kwargs = collect_pipeline_actions(ctx, **kwargs)
     summary = kwargs.pop("summary", None)
     with coverage_context(kwargs):
         show = ShowInfo(kwargs.pop("show", []))
@@ -204,12 +166,21 @@ def qgraph(ctx: click.Context, **kwargs: Any) -> None:
                 file=sys.stderr,
             )
             return
-        if (qgraph := script.qgraph(pipeline_graph_factory, **kwargs, show=show)) is None:
+        if (
+            qgraph := script.qgraph(
+                pipeline_graph_factory,
+                **kwargs,
+                show=show,
+                # Making a summary report requires that we load the same graph
+                # components as execution.
+                for_execution=(summary is not None),
+            )
+        ) is None:
             raise click.ClickException("QuantumGraph was empty; ERROR logs above should provide details.")
         # QuantumGraph-only summary call here since script.qgraph also called
         # by run methods.
         if summary:
-            report = Report(qgraphSummary=qgraph.getSummary())
+            report = Report(qgraphSummary=qgraph._make_summary())
             with open(summary, "w") as out:
                 # Do not save fields that are not set.
                 out.write(report.model_dump_json(exclude_none=True, indent=2))
@@ -222,7 +193,7 @@ def qgraph(ctx: click.Context, **kwargs: Any) -> None:
 @catch_and_exit
 def run(ctx: click.Context, **kwargs: Any) -> None:
     """Build and execute pipeline and quantum graph."""
-    kwargs = _collectActions(ctx, **kwargs)
+    kwargs = collect_pipeline_actions(ctx, **kwargs)
     with coverage_context(kwargs):
         show = ShowInfo(kwargs.pop("show", []))
         pipeline_graph_factory = script.build(**kwargs, show=show)
@@ -233,7 +204,7 @@ def run(ctx: click.Context, **kwargs: Any) -> None:
                 file=sys.stderr,
             )
             return
-        if (qgraph := script.qgraph(pipeline_graph_factory, **kwargs, show=show)) is None:
+        if (qgraph := script.qgraph(pipeline_graph_factory, for_execution=True, **kwargs, show=show)) is None:
             raise click.ClickException("QuantumGraph was empty; ERROR logs above should provide details.")
         _unhandledShow(show, "run")
         if show.handled:

lsst/ctrl/mpexec/cli/script/pre_exec_init_qbb.py

@@ -28,6 +28,9 @@
 from __future__ import annotations
 
 from lsst.pipe.base import BuildId, QuantumGraph
+from lsst.pipe.base.pipeline_graph import TaskImportMode
+from lsst.pipe.base.quantum_graph import PredictedQuantumGraph
+from lsst.resources import ResourcePath, ResourcePathExpression
 from lsst.utils.logging import getLogger
 
 from ..butler_factory import ButlerFactory
@@ -37,7 +40,7 @@ _LOG = getLogger(__name__)
 
 def pre_exec_init_qbb(
     butler_config: str,
-    qgraph: str,
+    qgraph: ResourcePathExpression,
     qgraph_id: str | None,
     config_search_path: list[str] | None,
     **kwargs: object,
@@ -64,11 +67,27 @@ def pre_exec_init_qbb(
         function and pass all the option kwargs to each of the script functions
         which ignore these unused kwargs.
     """
-    _LOG.verbose("Reading full quantum graph from %s.", qgraph)
-    # Load quantum graph. We do not really need individual Quanta here,
-    # but we need datastore records for initInputs, and those are only
-    # available from Quanta, so load the whole thing.
-    qg = QuantumGraph.loadUri(qgraph, graphID=BuildId(qgraph_id) if qgraph_id is not None else None)
+    qgraph = ResourcePath(qgraph)
+    match qgraph.getExtension():
+        case ".qgraph":
+            _LOG.verbose("Reading full quantum graph from %s.", qgraph)
+            qg = PredictedQuantumGraph.from_old_quantum_graph(
+                QuantumGraph.loadUri(
+                    qgraph,
+                    graphID=BuildId(qgraph_id) if qgraph_id is not None else None,
+                )
+            )
+        case ".qg":
+            _LOG.verbose("Reading init quanta from quantum graph from %s.", qgraph)
+            if qgraph_id is not None:
+                _LOG.warning("--qgraph-id is ignored when loading new '.qg' files.")
+            with PredictedQuantumGraph.open(
+                qgraph, import_mode=TaskImportMode.ASSUME_CONSISTENT_EDGES
+            ) as reader:
+                reader.read_init_quanta()
+            qg = reader.finish()
+        case ext:
+            raise ValueError(f"Unrecognized extension for quantum graph: {ext!r}")
 
     # Ensure that QBB uses shared datastore cache for writes.
     ButlerFactory.define_datastore_cache()

lsst/ctrl/mpexec/cli/script/qgraph.py

@@ -42,6 +42,8 @@ from lsst.pipe.base.all_dimensions_quantum_graph_builder import (
 )
 from lsst.pipe.base.dot_tools import graph2dot
 from lsst.pipe.base.mermaid_tools import graph2mermaid
+from lsst.pipe.base.pipeline_graph import TaskImportMode
+from lsst.pipe.base.quantum_graph import PredictedQuantumGraph, PredictedQuantumGraphComponents
 from lsst.resources import ResourcePath, ResourcePathExpression
 from lsst.utils.iteration import ensure_iterable
 from lsst.utils.logging import getLogger
@@ -60,7 +62,7 @@ _LOG = getLogger(__name__)
 def qgraph(
     pipeline_graph_factory: PipelineGraphFactory | None,
     *,
-    qgraph: QuantumGraph | ResourcePathExpression | None,
+    qgraph: ResourcePathExpression | None,
     qgraph_id: str | None,
     qgraph_node_id: Iterable[uuid.UUID | str] | None,
     qgraph_datastore_records: bool,
@@ -85,8 +87,10 @@ def qgraph(
     mock: bool = False,
     unmocked_dataset_types: Sequence[str],
     mock_failure: Mapping[str, ForcedFailure],
+    for_execution: bool = False,
+    for_init_output_run: bool = False,
     **kwargs: object,
-) -> QuantumGraph | None:
+) -> PredictedQuantumGraph | None:
     """Implement the command line interface `pipetask qgraph` subcommand.
 
     Should only be called by command line tools and unit test code that test
@@ -97,8 +101,7 @@ def qgraph(
     pipeline_graph_factory : `..PipelineGraphFactory` or `None`
         A factory that holds the pipeline and can produce a pipeline graph.
         If this is not `None` then `qgraph` should be `None`.
-    qgraph : `lsst.pipe.base.QuantumGraph`, convertible to \
-            `lsst.resources.ResourcePath` or `None`
+    qgraph : convertible to `lsst.resources.ResourcePath`, or `None`
         URI location for a serialized quantum graph definition. If this option
         is not `None` then ``pipeline_graph_factory`` should be `None`.
     qgraph_id : `str` or `None`
@@ -179,15 +182,23 @@ def qgraph(
         List of overall-input dataset types that should not be mocked.
     mock_failure : `~collections.abc.Mapping`
         Quanta that should raise exceptions.
-    **kwargs : `object`
+    for_execution : `bool`, optional
+        If `True`, the script is being used to feed another that will execute
+        the given quanta, and hence all information needed for execution must
+        be loaded.
+    for_init_output_run : `bool`, optional
+        If `True`, the script is being used to feed another that will
+        initialize the output run, and hence all information needed to do so
+        must be loaded.
+    **kwargs : `dict` [`str`, `str`]
         Ignored; click commands may accept options for more than one script
         function and pass all the option kwargs to each of the script functions
         which ignore these unused kwargs.
 
     Returns
     -------
-    qgraph : `lsst.pipe.base.QuantumGraph` or `None`
-        The qgraph object that was created.
+    qg : `lsst.pipe.base.quantum_graph.PredictedQuantumGraph`
+        The quantum graph object that was created or loaded.
     """
     # make sure that --extend-run always enables --skip-existing
     if extend_run:
@@ -213,16 +224,43 @@ def qgraph(
     if skip_existing and run:
         skip_existing_in += (run,)
 
+    qgc: PredictedQuantumGraphComponents
     if qgraph is not None:
-        if not isinstance(qgraph, QuantumGraph):
-            # click passes empty tuple as default value for qgraph_node_id
-            nodes = qgraph_node_id or None
-            qgraph = QuantumGraph.loadUri(
-                qgraph,
-                butler.dimensions,
-                nodes=nodes,
-                graphID=BuildId(qgraph_id) if qgraph_id is not None else None,
-            )
+        # click passes empty tuple as default value for qgraph_node_id
+        quantum_ids = (
+            {uuid.UUID(q) if not isinstance(q, uuid.UUID) else q for q in qgraph_node_id}
+            if qgraph_node_id
+            else None
+        )
+        qgraph = ResourcePath(qgraph)
+        match qgraph.getExtension():
+            case ".qgraph":
+                qgc = PredictedQuantumGraphComponents.from_old_quantum_graph(
+                    QuantumGraph.loadUri(
+                        qgraph,
+                        butler.dimensions,
+                        nodes=quantum_ids,
+                        graphID=BuildId(qgraph_id) if qgraph_id is not None else None,
+                    )
+                )
+            case ".qg":
+                if qgraph_id is not None:
+                    _LOG.warning("--qgraph-id is ignored when loading new '.qg' files.")
+                if for_execution or for_init_output_run or save_qgraph or show.needs_full_qg:
+                    import_mode = TaskImportMode.ASSUME_CONSISTENT_EDGES
+                else:
+                    import_mode = TaskImportMode.DO_NOT_IMPORT
+                with PredictedQuantumGraph.open(qgraph, import_mode=import_mode) as reader:
+                    if for_execution or qgraph_dot or qgraph_mermaid or show.needs_full_qg:
+                        # This reads everything for the given quanta.
+                        reader.read_execution_quanta(quantum_ids)
+                    elif for_init_output_run:
+                        reader.read_init_quanta()
+                    else:
+                        reader.read_thin_graph()
+                    qgc = reader.components
+            case ext:
+                raise ValueError(f"Unrecognized extension for quantum graph: {ext!r}")
 
         # pipeline can not be provided in this case
         if pipeline_graph_factory:
@@ -265,38 +303,37 @@ def qgraph(
             output_run=run,
             data_id_tables=data_id_tables,
         )
-        # accumulate metadata
+        # Accumulate metadata (QB builder adds some of its own).
         metadata = {
-            "input": inputs,
-            "output": output,
             "butler_argument": str(butler_config),
-            "output_run": run,
             "extend_run": extend_run,
             "skip_existing_in": skip_existing_in,
             "skip_existing": skip_existing,
             "data_query": data_query,
         }
         assert run is not None, "Butler output run collection must be defined"
-        qgraph = graph_builder.build(metadata, attach_datastore_records=qgraph_datastore_records)
+        qgc = graph_builder.finish(
+            output, metadata=metadata, attach_datastore_records=qgraph_datastore_records
+        )
 
-    if len(qgraph) == 0:
-        # Nothing to do.
+    if not summarize_quantum_graph(qgc.header):
         return None
-    summarize_quantum_graph(qgraph)
 
     if save_qgraph:
-        _LOG.verbose("Writing QuantumGraph to %r.", save_qgraph)
-        qgraph.saveUri(save_qgraph)
+        _LOG.verbose("Writing quantum graph to %r.", save_qgraph)
+        qgc.write(save_qgraph)
+
+    qg = qgc.assemble()
 
     if qgraph_dot:
         _LOG.verbose("Writing quantum graph DOT visualization to %r.", qgraph_dot)
-        graph2dot(qgraph, qgraph_dot)
+        graph2dot(qg, qgraph_dot)  # TODO[DM-51850]: make this work
 
     if qgraph_mermaid:
         _LOG.verbose("Writing quantum graph Mermaid visualization to %r.", qgraph_mermaid)
-        graph2mermaid(qgraph, qgraph_mermaid)
+        graph2mermaid(qg, qgraph_mermaid)  # TODO[DM-51850]: make this work
 
     # optionally dump some info.
-    show.show_graph_info(qgraph, butler_config)
+    show.show_graph_info(qg, butler_config)  # TODO[DM-51850]: make this work
 
-    return qgraph
+    return qg

lsst/ctrl/mpexec/cli/script/run.py

@@ -33,8 +33,9 @@ from typing import TYPE_CHECKING, Literal
 import astropy.units as u
 
 import lsst.utils.timer
-from lsst.pipe.base import ExecutionResources, QuantumGraph, TaskFactory
+from lsst.pipe.base import ExecutionResources, TaskFactory
 from lsst.pipe.base.mp_graph_executor import MPGraphExecutor
+from lsst.pipe.base.quantum_graph import PredictedQuantumGraph
 from lsst.pipe.base.single_quantum_executor import SingleQuantumExecutor
 from lsst.resources import ResourcePath, ResourcePathExpression
 from lsst.utils.doImport import doImportType
@@ -52,7 +53,7 @@ _LOG = getLogger(__name__)
 
 
 def run(
-    qg: QuantumGraph,
+    qg: PredictedQuantumGraph,
     *,
     task_factory: TaskFactory | None = None,
     pdb: str | None,
@@ -93,8 +94,8 @@ def run(
 
     Parameters
     ----------
-    qg : `lsst.pipe.base.QuantumGraph`
-        A QuantumGraph generated by a previous subcommand.
+    qg : `lsst.pipe.base.quantum_graph.PredictedQuantumGraph`
+        A quantum graph generated by a previous subcommand.
     task_factory : `lsst.pipe.base.TaskFactory`, optional
         A custom task factory to use.
     pdb : `str`, optional
@@ -211,19 +212,17 @@ def run(
     enable_lsst_debug = debug
     del debug
 
-    # If we have no output run specified, use the one from the graph rather
-    # than letting a new timestamped run be created.
-    if not output_run and qg.metadata and (output_run := qg.metadata.get("output_run")):
-        output_run = output_run
-
-    # Check that output run defined on command line is consistent with
-    # quantum graph.
-    if output_run and qg.metadata:
-        graph_output_run = qg.metadata.get("output_run", output_run)
-        if graph_output_run != output_run:
+    if not output_run:
+        # If we have no output run specified, use the one from the graph rather
+        # than letting a new timestamped run be created.
+        output_run = qg.header.output_run
+    else:
+        # Check that output run defined on command line is consistent with
+        # quantum graph.
+        if qg.header.output_run != output_run:
             raise ValueError(
                 f"Output run defined on command line ({output_run}) has to be "
-                f"identical to graph metadata ({graph_output_run}). "
+                f"identical to graph metadata ({qg.header.output_run}). "
                 "To update graph metadata run `pipetask update-graph-run` command."
             )
 

lsst/ctrl/mpexec/cli/script/run_qbb.py

@@ -43,8 +43,9 @@ from lsst.daf.butler import (
     Quantum,
     QuantumBackedButler,
 )
-from lsst.pipe.base import BuildId, ExecutionResources, QuantumGraph, TaskFactory
+from lsst.pipe.base import ExecutionResources, TaskFactory
 from lsst.pipe.base.mp_graph_executor import MPGraphExecutor
+from lsst.pipe.base.quantum_graph import PredictedQuantumGraph
 from lsst.pipe.base.single_quantum_executor import SingleQuantumExecutor
 from lsst.resources import ResourcePath, ResourcePathExpression
 from lsst.utils.logging import VERBOSE, getLogger
@@ -147,31 +148,31 @@ def run_qbb(
     if not enable_implicit_threading:
         disable_implicit_threading()
 
+    # click passes empty tuple as default value for qgraph_node_id
+    quantum_ids = (
+        {uuid.UUID(q) if not isinstance(q, uuid.UUID) else q for q in qgraph_node_id}
+        if qgraph_node_id
+        else None
+    )
     # Load quantum graph.
-    nodes = qgraph_node_id or None
     with lsst.utils.timer.time_this(
         _LOG,
-        msg=f"Reading {str(len(nodes)) if nodes is not None else 'all'} quanta.",
+        msg=f"Reading {str(len(quantum_ids)) if quantum_ids is not None else 'all'} quanta.",
         level=VERBOSE,
     ) as qg_read_time:
-        qg = QuantumGraph.loadUri(
-            qgraph, nodes=nodes, graphID=BuildId(qgraph_id) if qgraph_id is not None else None
-        )
+        qg = PredictedQuantumGraph.read_execution_quanta(qgraph, quantum_ids=quantum_ids)
     job_metadata = {"qg_read_time": qg_read_time.duration, "qg_size": len(qg)}
 
-    if qg.metadata is None:
-        raise ValueError("QuantumGraph is missing metadata, cannot continue.")
-
-    summarize_quantum_graph(qg)
+    summarize_quantum_graph(qg.header)
 
-    dataset_types = {dstype.name: dstype for dstype in qg.registryDatasetTypes()}
+    dataset_types = {dtn.name: dtn.dataset_type for dtn in qg.pipeline_graph.dataset_types.values()}
 
     # Ensure that QBB uses shared datastore cache.
     ButlerFactory.define_datastore_cache()
 
     _butler_factory = _QBBFactory(
         butler_config=butler_config,
-        dimensions=qg.universe,
+        dimensions=qg.pipeline_graph.universe,
         dataset_types=dataset_types,
         config_search_path=config_search_path,
     )

lsst/ctrl/mpexec/cli/script/update_graph_run.py

@@ -25,16 +25,20 @@
 # You should have received a copy of the GNU General Public License
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 
-from lsst.pipe.base import QuantumGraph
+import logging
+
+from lsst.pipe.base.quantum_graph import PredictedQuantumGraphComponents
 from lsst.resources import ResourcePathExpression
 
+_LOG = logging.getLogger(__name__)
+
 
 def update_graph_run(
     input_graph: ResourcePathExpression,
     run: str,
     output_graph: ResourcePathExpression,
-    metadata_run_key: str,
-    update_graph_id: bool,
+    metadata_run_key: str = "output_run",
+    update_graph_id: bool = False,
 ) -> None:
     """Update quantum graph with new output run name and dataset IDs and save
     updated graph to a file.
@@ -47,15 +51,15 @@ def update_graph_run(
         Collection name, if collection exists it must be of ``RUN`` type.
     output_graph : `~lsst.resources.ResourcePathExpression`
         Location to store updated quantum graph.
-    metadata_run_key : `str`
-        Specifies metadata key corresponding to output run name to update
-        with new run name. If metadata is missing it is not
-        updated. If metadata is present but key is missing, it will be
-        added.
+    metadata_run_key : `str`, optional
+        Ignored (overriding warns).
     update_graph_id : `bool`
-        If `True` then also update graph ID with a new unique value.
+        Ignored (overriding warns).
     """
-    qgraph = QuantumGraph.loadUri(input_graph)
-    key = metadata_run_key if metadata_run_key else None
-    qgraph.updateRun(run, metadata_key=key, update_graph_id=update_graph_id)
-    qgraph.saveUri(output_graph)
+    qgc = PredictedQuantumGraphComponents.read_execution_quanta(input_graph)
+    if metadata_run_key and metadata_run_key != "output_run":
+        _LOG.warning("--metadata-run-key is now ignored.")
+    if update_graph_id:
+        _LOG.warning("--update-graph-id is now ignored.")
+    qgc.update_output_run(run)
+    qgc.write(output_graph)

lsst/ctrl/mpexec/cli/utils.py

@@ -30,13 +30,15 @@ import collections
 import contextlib
 import logging
 import re
+from typing import Any
 
+import click
 from astropy.table import Table
 
 from lsst.daf.butler.cli.opt import config_file_option, config_option
-from lsst.daf.butler.cli.utils import MWCommand, split_commas
-from lsst.pipe.base import QuantumGraph
+from lsst.daf.butler.cli.utils import MWCommand, MWCtxObj, split_commas
 from lsst.pipe.base.cli.opt import instrument_option
+from lsst.pipe.base.quantum_graph import HeaderModel
 from lsst.utils.logging import getLogger
 
 from .opt import delete_option, task_option
@@ -103,7 +105,7 @@ _ACTION_CONFIG_FILE = _PipelineActionType("configfile", "(?P<label>.+):(?P<value
 _ACTION_ADD_INSTRUMENT = _PipelineActionType("add_instrument", "(?P<value>[^:]+)")
 
 
-def makePipelineActions(
+def make_pipeline_actions(
     args: list[str],
     taskFlags: list[str] = task_option.opts(),
     deleteFlags: list[str] = delete_option.opts(),
@@ -160,47 +162,96 @@ def makePipelineActions(
     return pipelineActions
 
 
+def collect_pipeline_actions(ctx: click.Context, **kwargs: Any) -> dict[str, Any]:
+    """Extract pipeline building options, replace them with PipelineActions,
+    return updated `kwargs`.
+
+    Parameters
+    ----------
+    ctx : `click.Context`
+        Click context to extract actions from.
+    **kwargs : `object`
+        Keyword arguments to start from.
+
+    Returns
+    -------
+    kwargs : `dict`
+        Updated keyword arguments.
+
+    Notes
+    -----
+    The pipeline actions (task, delete, config, config_file, and instrument)
+    must be handled in the order they appear on the command line, but the CLI
+    specification gives them all different option names. So, instead of using
+    the individual action options as they appear in kwargs (because
+    invocation order can't be known), we capture the CLI arguments by
+    overriding `click.Command.parse_args` and save them in the Context's
+    `obj` parameter. We use `makePipelineActions` to create a list of
+    pipeline actions from the CLI arguments and pass that list to the script
+    function using the `pipeline_actions` kwarg name, and remove the action
+    options from kwargs.
+    """
+    from lsst.pipe.base.cli.opt import instrument_option
+
+    from .opt import delete_option, task_option
+
+    for pipelineAction in (
+        task_option.name(),
+        delete_option.name(),
+        config_option.name(),
+        config_file_option.name(),
+        instrument_option.name(),
+    ):
+        kwargs.pop(pipelineAction)
+
+    actions = make_pipeline_actions(MWCtxObj.getFrom(ctx).args)
+    pipeline_actions = []
+    for action in actions:
+        pipeline_actions.append(action)
+
+    kwargs["pipeline_actions"] = pipeline_actions
+    return kwargs
+
+
 class PipetaskCommand(MWCommand):
     """Command subclass with pipetask-command specific overrides."""
 
     extra_epilog = "See 'pipetask --help' for more options."
 
 
-def summarize_quantum_graph(qgraph: QuantumGraph) -> int:
+def summarize_quantum_graph(qg_header: HeaderModel) -> int:
     """Report a summary of the quanta in the graph.
 
     Parameters
     ----------
-    qgraph : `lsst.pipe.base.QuantumGraph`
-        The graph to be summarized.
+    qg_header : `lsst.pipe.base.quantum_graph.HeaderModel`
+        Header of the quantum graph.
 
     Returns
     -------
     n_quanta : `int`
         The number of quanta in the graph.
     """
-    n_quanta = len(qgraph)
+    n_quanta = qg_header.n_quanta
     if n_quanta == 0:
         _LOG.info("QuantumGraph contains no quanta.")
     else:
-        summary = qgraph.getSummary()
         if _LOG.isEnabledFor(logging.INFO):
             qg_quanta, qg_tasks = [], []
-            for task_label, task_info in summary.qgraphTaskSummaries.items():
+            for task_label, n_quanta_for_task in qg_header.n_task_quanta.items():
                 qg_tasks.append(task_label)
-                qg_quanta.append(task_info.numQuanta)
+                qg_quanta.append(n_quanta_for_task)
             qg_task_table = Table(dict(Quanta=qg_quanta, Tasks=qg_tasks))
             qg_task_table_formatted = "\n".join(qg_task_table.pformat())
             quanta_str = "quantum" if n_quanta == 1 else "quanta"
-            n_tasks = len(qgraph.taskGraph)
+            n_tasks = len(qg_header.n_task_quanta)
             n_tasks_plural = "" if n_tasks == 1 else "s"
             _LOG.info(
-                "QuantumGraph contains %d %s for %d task%s, graph ID: %r\n%s",
+                "QuantumGraph contains %d %s for %d task%s\n%s",
                 n_quanta,
                 quanta_str,
                 n_tasks,
                 n_tasks_plural,
-                qgraph.graphID,
                 qg_task_table_formatted,
             )
     return n_quanta

lsst/ctrl/mpexec/showInfo.py

@@ -40,8 +40,9 @@ import lsst.pex.config as pexConfig
 import lsst.pex.config.history as pexConfigHistory
 from lsst.daf.butler import Butler, DatasetRef, DatasetType, NamedKeyMapping
 from lsst.daf.butler.datastore.record_data import DatastoreRecordData
-from lsst.pipe.base import PipelineGraph, QuantumGraph
+from lsst.pipe.base import PipelineGraph
 from lsst.pipe.base.pipeline_graph import visualization
+from lsst.pipe.base.quantum_graph import PredictedQuantumGraph
 from lsst.resources import ResourcePathExpression
 
 from . import util
@@ -135,6 +136,7 @@ class ShowInfo:
             raise ValueError(
                 f"Unknown value(s) for show: {unknown} (choose from '{', '.join(sorted(known))}')"
             )
+        self.needs_full_qg: bool = "graph" in self.commands.keys() or "uri" in self.commands.keys()
 
     @property
     def unhandled(self) -> frozenset[str]:
@@ -190,15 +192,15 @@ class ShowInfo:
 
     def show_graph_info(
         self,
-        graph: QuantumGraph,
+        qg: PredictedQuantumGraph,
         butler_config: ResourcePathExpression | None = None,
     ) -> None:
         """Show information associated with this graph.
 
         Parameters
         ----------
-        graph : `lsst.pipe.base.QuantumGraph`
-            Graph to use when reporting information.
+        qg : `lsst.pipe.base.quantum_graph.PredictedQuantumGraph`
+            Quantum graph.
         butler_config : convertible to `lsst.resources.ResourcePath`, optional
             Path to configuration for the butler.
         """
@@ -207,13 +209,13 @@ class ShowInfo:
                 continue
             match command:
                 case "graph":
-                    self._showGraph(graph)
+                    self._showGraph(qg)
                 case "uri":
                     if butler_config is None:
                         raise ValueError("Showing URIs requires the -b option")
-                    self._showUri(graph, butler_config)
+                    self._showUri(qg, butler_config)
                 case "workflow":
-                    self._showWorkflow(graph)
+                    self._showWorkflow(qg)
                 case _:
                     raise RuntimeError(f"Unexpectedly tried to process command {command!r}.")
             self.handled.add(command)
@@ -322,13 +324,13 @@ class ShowInfo:
             for configName, taskName in util.subTaskIter(task_node.config):
                 print(f"{configName}: {taskName}", file=self.stream)
 
-    def _showGraph(self, graph: QuantumGraph) -> None:
+    def _showGraph(self, qg: PredictedQuantumGraph) -> None:
         """Print quanta information to stdout
 
         Parameters
         ----------
-        graph : `lsst.pipe.base.QuantumGraph`
-            Execution graph.
+        qg : `lsst.pipe.base.quantum_graph.PredictedQuantumGraph`
+            Quantum graph.
         """
 
         def _print_refs(
@@ -351,39 +353,38 @@ class ShowInfo:
                 else:
                     print(f"      {key}: []", file=self.stream)
 
-        for taskNode in graph.iterTaskGraph():
-            print(taskNode, file=self.stream)
-
-            for iq, quantum_node in enumerate(graph.getNodesForTask(taskNode)):
-                quantum = quantum_node.quantum
-                print(
-                    f"  Quantum {iq} dataId={quantum.dataId} nodeId={quantum_node.nodeId}:", file=self.stream
-                )
+        for task_label, quanta_for_task in qg.quanta_by_task.items():
+            print(f"{task_label} ({qg.pipeline_graph.tasks[task_label].task_class_name})", file=self.stream)
+            execution_quanta = qg.build_execution_quanta(task_label=task_label)
+            for data_id, quantum_id in quanta_for_task.items():
+                quantum = execution_quanta[quantum_id]
+                print(f"  Quantum {quantum_id} dataId={data_id}:", file=self.stream)
                 print("    inputs:", file=self.stream)
                 _print_refs(quantum.inputs, quantum.datastore_records)
                 print("    outputs:", file=self.stream)
                 _print_refs(quantum.outputs, quantum.datastore_records)
 
-    def _showWorkflow(self, graph: QuantumGraph) -> None:
+    def _showWorkflow(self, qg: PredictedQuantumGraph) -> None:
         """Print quanta information and dependency to stdout
 
         Parameters
         ----------
-        graph : `lsst.pipe.base.QuantumGraph`
-            Execution graph.
+        qg : `lsst.pipe.base.quantum_graph.PredictedQuantumGraph`
+            Quantum graph.
         """
-        for node in graph:
-            print(f"Quantum {node.nodeId}: {node.taskDef.taskName}", file=self.stream)
-            for parent in graph.determineInputsToQuantumNode(node):
-                print(f"Parent Quantum {parent.nodeId} - Child Quantum {node.nodeId}", file=self.stream)
+        xgraph = qg.quantum_only_xgraph
+        for child_id, child_data in xgraph.nodes.items():
+            print(f"Quantum {child_id}: {child_data['pipeline_node'].task_class_name}", file=self.stream)
+            for parent_id in xgraph.predecessors(child_id):
+                print(f"Parent Quantum {parent_id} - Child Quantum {child_id}", file=self.stream)
 
-    def _showUri(self, graph: QuantumGraph, butler_config: ResourcePathExpression) -> None:
+    def _showUri(self, qg: PredictedQuantumGraph, butler_config: ResourcePathExpression) -> None:
         """Print input and predicted output URIs to stdout.
 
         Parameters
         ----------
-        graph : `lsst.pipe.base.QuantumGraph`
-            Execution graph
+        qg : `lsst.pipe.base.quantum_graph.PredictedQuantumGraph`
+            Quantum graph.
         butler_config : convertible to `lsst.resources.ResourcePath`
             Path to configuration for the butler.
         """
@@ -398,13 +399,16 @@ class ShowInfo:
                     print(f"        {compName}: {compUri}", file=self.stream)
 
         butler = Butler.from_config(butler_config)
-        for node in graph:
-            print(f"Quantum {node.nodeId}: {node.taskDef.taskName}", file=self.stream)
+        xgraph = qg.quantum_only_xgraph
+        execution_quanta = qg.build_execution_quanta()
+        for quantum_id, quantum_data in xgraph.nodes.items():
+            print(f"Quantum {quantum_id}: {quantum_data['pipeline_node'].task_class_name}", file=self.stream)
             print("  inputs:", file=self.stream)
-            for refs in node.quantum.inputs.values():
+            execution_quantum = execution_quanta[quantum_id]
+            for refs in execution_quantum.inputs.values():
                 for ref in refs:
                     dumpURIs(ref)
             print("  outputs:", file=self.stream)
-            for refs in node.quantum.outputs.values():
+            for refs in execution_quantum.outputs.values():
                 for ref in refs:
                     dumpURIs(ref)

lsst/ctrl/mpexec/singleQuantumExecutor.py

@@ -164,7 +164,7 @@ class SingleQuantumExecutor(lsst.pipe.base.single_quantum_executor.SingleQuantum
         return super()._write_metadata(quantum, metadata, task_node, limited_butler=limited_butler)
 
     def initGlobals(self, quantum: Quantum) -> None:
-        return super()._init_globals(quantum)
+        pass
 
     @property
     def butler(self) -> Butler | None:

lsst/ctrl/mpexec/version.py

@@ -1,2 +1,2 @@
 __all__ = ["__version__"]
-__version__ = "29.2025.3900"
+__version__ = "29.2025.4000"

{lsst_ctrl_mpexec-29.2025.3900.dist-info → lsst_ctrl_mpexec-29.2025.4000.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: lsst-ctrl-mpexec
-Version: 29.2025.3900
+Version: 29.2025.4000
 Summary: Pipeline execution infrastructure for the Rubin Observatory LSST Science Pipelines.
 Author-email: Rubin Observatory Data Management <dm-admin@lists.lsst.org>
 License: BSD 3-Clause License

{lsst_ctrl_mpexec-29.2025.3900.dist-info → lsst_ctrl_mpexec-29.2025.4000.dist-info}/RECORD

@@ -1,7 +1,7 @@
 lsst/__init__.py,sha256=aXdEOZVrBQISQi6XPS9s1NhBjIJaIwNNxCFRiGchRAw,1369
 lsst/ctrl/__init__.py,sha256=aXdEOZVrBQISQi6XPS9s1NhBjIJaIwNNxCFRiGchRAw,1369
 lsst/ctrl/mpexec/__init__.py,sha256=Ld4bk-SLij104yAdrAzvh54ZblCglYszOa6cLjWnIDE,1707
-lsst/ctrl/mpexec/_pipeline_graph_factory.py,sha256=suzWUn9YGn0CTA_3N1Wd-sUo7TFxuo_6VZ2nO0CJ5a8,3552
+lsst/ctrl/mpexec/_pipeline_graph_factory.py,sha256=HJPjvbsfqsKE0FVru5zje55rgKb9jXvOMVEEGIaTCU8,4337
 lsst/ctrl/mpexec/execFixupDataId.py,sha256=26eFIrZ-I5oTGoBzO35WH2UtwYIPe5aX37IHE9OfAa0,1633
 lsst/ctrl/mpexec/executionGraphFixup.py,sha256=hpkU0cCRcz80c-YQS1eU5G4riRTSUfOfPjCehTkWTMA,1776
 lsst/ctrl/mpexec/log_capture.py,sha256=Y8ExKqrpyboBoi6giY9dlL4OyCrZn-c_6EB8Oh_z6dc,1605
@@ -11,18 +11,18 @@ lsst/ctrl/mpexec/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 lsst/ctrl/mpexec/quantumGraphExecutor.py,sha256=7LCoqsmNSWUJ1ph1bfgrVrpk5Ug5ArzniFkqcxgjfhI,2106
 lsst/ctrl/mpexec/reports.py,sha256=EvHjW9wdjfN1lj4DQH634oJ9zv3wYKySvJ_UtFDtNHY,2460
 lsst/ctrl/mpexec/separablePipelineExecutor.py,sha256=yHymF9jSthVCl_230TzRqQrcAmohSgR7Me8YAbMazM8,1818
-lsst/ctrl/mpexec/showInfo.py,sha256=nOnZe4SLJPpIYEoND-6uaYOI0YBKQRX92yYIN1l1zUo,16867
+lsst/ctrl/mpexec/showInfo.py,sha256=WCoZYd_4q6ZIYRH0qv-VK8zCl53aIIeYlma48tVO3ZI,17470
 lsst/ctrl/mpexec/simple_pipeline_executor.py,sha256=aVWgOds0ILCTzXdrWy0KFyjcIuqw6cNq8alAJeZd8AE,1797
-lsst/ctrl/mpexec/singleQuantumExecutor.py,sha256=Y6ufL6y5PuQ6-x8sFu_m2moCIA3JvOf6Gb9PotXeTno,8649
+lsst/ctrl/mpexec/singleQuantumExecutor.py,sha256=Y70xs5f06sEeDXF3cKNjxL4gdG69Osu8Xbol-vm-VIo,8616
 lsst/ctrl/mpexec/taskFactory.py,sha256=0TdCM-le7CXhobVbWPTqcq9sOrGceUY6mmkzzWhi0dM,1707
 lsst/ctrl/mpexec/util.py,sha256=y2Rw5PL40_EuLtVxiqSVX0JfPV4IrFl1LfOMUWx2u30,4236
-lsst/ctrl/mpexec/version.py,sha256=qaaoasFkyU8Kx3tKT5jPh3H-bKD5Y8pAmsL3Scaq2UU,55
+lsst/ctrl/mpexec/version.py,sha256=OZgl6BR-Rxy62NJlHO2yg_Rq4EhfmRSKDkEEnAyc-3Q,55
 lsst/ctrl/mpexec/cli/__init__.py,sha256=6dpDHNBzyicVpFi1fsaiYVbYEMeoL57IHKkPaej24gs,1301
 lsst/ctrl/mpexec/cli/butler_factory.py,sha256=-Nlm5nVcWK_JbW8oc5qudu9yuZg5Pknf1LmtkxTkHJs,26713
 lsst/ctrl/mpexec/cli/pipetask.py,sha256=4HnhX9dCizCihVbpHVJX5WXO9TEli9oL6wA-tPh1_vA,2209
-lsst/ctrl/mpexec/cli/utils.py,sha256=Yld_IHGY_z-Sn7KkuFbhQcrhWsZci_AHB7jDFkeoJSY,8099
+lsst/ctrl/mpexec/cli/utils.py,sha256=Oiw4yOpsR7_kJObhZAZu8hm81NFmaLaRAv86v4smadk,9833
 lsst/ctrl/mpexec/cli/cmd/__init__.py,sha256=nRmwwW5d55gAEkyE7NpSK8mxa56HcfEta2r-Y9I07F8,1661
-lsst/ctrl/mpexec/cli/cmd/commands.py,sha256=5vmik8pzd61rAAZs0FjbQxzmZEHkRC0_M21yh4Mw6sw,18245
+lsst/ctrl/mpexec/cli/cmd/commands.py,sha256=dO0WMFEwAAGoiNBgkQXu1oW-N89Eah89X2XR84PKQBg,17063
 lsst/ctrl/mpexec/cli/opt/__init__.py,sha256=IzUInuJj9igiaNcEqMx0adelgJtQC5_XMYnaiizBn0A,1378
 lsst/ctrl/mpexec/cli/opt/arguments.py,sha256=vjUw0ZN_4HStp-_3ne6AT5S_eH7sly3OVfL07tgrJnY,1572
 lsst/ctrl/mpexec/cli/opt/optionGroups.py,sha256=v_fbB-frVUdXr82VY_mC8KHdUJSJNaU64qBJO4cA3To,7445
@@ -31,20 +31,20 @@ lsst/ctrl/mpexec/cli/script/__init__.py,sha256=eCuF4FAI5D3pl05IMJj7TCkZq-hireua2
 lsst/ctrl/mpexec/cli/script/build.py,sha256=3_ohOGuope_hCrvBAo1X31nejgTZ73PZv_ew3ykhYIc,6919
 lsst/ctrl/mpexec/cli/script/cleanup.py,sha256=D7W-azf4mNJcIWhbU5uCRCi94mkb8-Q2ksRFblQGrUw,4990
 lsst/ctrl/mpexec/cli/script/confirmable.py,sha256=Bo1GSTZQn44d_TRj6N3YfpYcZiuHEYoz26WZQwMyb4A,3918
-lsst/ctrl/mpexec/cli/script/pre_exec_init_qbb.py,sha256=ubH3Blw5y0YISDLCI0SCaSqEfumnt30_J0jvtpdoN8U,3344
+lsst/ctrl/mpexec/cli/script/pre_exec_init_qbb.py,sha256=3cNw5BKMT4_YWo1GeuH4VmvKeYOoyDcjH7QgBEoiPmA,4140
 lsst/ctrl/mpexec/cli/script/purge.py,sha256=gYwSsZfTBP6oDcDp_YdqQEKGvAStvsj5hwNw42S8ptE,10637
-lsst/ctrl/mpexec/cli/script/qgraph.py,sha256=yqTSynAP3d1qiRzrdvaSBCspYQFASpXtrGUeybTUKfk,12798
+lsst/ctrl/mpexec/cli/script/qgraph.py,sha256=aaWRxqQHWWg8hRYlMZmKxQMq5arZNIYa4rHvQmENRUs,14905
 lsst/ctrl/mpexec/cli/script/report.py,sha256=ItJitmYmWIDjj7PxRtP4qXLx-z5FAU6nSfI2gx0GS5k,12800
-lsst/ctrl/mpexec/cli/script/run.py,sha256=AxGv8NkyYYJCsFw3vqC6HkKRU7wTLuSetllKRCmFT-4,14180
-lsst/ctrl/mpexec/cli/script/run_qbb.py,sha256=iWlxg-CMp2nkk5B0ZGovMd0Eg9Q-F1zbcQqfhUUYDYI,10739
-lsst/ctrl/mpexec/cli/script/update_graph_run.py,sha256=v_EdOaD6jR_vSlgm_5-pwUjoNEFMrAuYFM1xIaHVU3Q,2597
-lsst_ctrl_mpexec-29.2025.3900.dist-info/licenses/COPYRIGHT,sha256=pGCjnRAnyt02a6_9PLzXQikpvYmvMmK9fCdOKlRSV6k,369
-lsst_ctrl_mpexec-29.2025.3900.dist-info/licenses/LICENSE,sha256=pRExkS03v0MQW-neNfIcaSL6aiAnoLxYgtZoFzQ6zkM,232
-lsst_ctrl_mpexec-29.2025.3900.dist-info/licenses/bsd_license.txt,sha256=7MIcv8QRX9guUtqPSBDMPz2SnZ5swI-xZMqm_VDSfxY,1606
-lsst_ctrl_mpexec-29.2025.3900.dist-info/licenses/gpl-v3.0.txt,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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-lsst_ctrl_mpexec-29.2025.3900.dist-info/RECORD,,
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