lorax-arg 0.1__py3-none-any.whl → 0.1.1__py3-none-any.whl

lorax/modes.py

@@ -79,8 +79,8 @@ def detect_mode() -> str:
 
     Priority:
     1. Explicit LORAX_MODE environment variable
-    2. Auto-detect based on REDIS_CLUSTER and GCS_BUCKET_NAME
-    3. Default to 'local' for conda package usage
+    2. Auto-detect: production only when both Redis and GCS are configured
+    3. Otherwise default to 'local' (never implicitly select development)
     """
     explicit_mode = os.getenv("LORAX_MODE", "").lower()
     if explicit_mode in MODE_CONFIGS:
@@ -91,10 +91,9 @@ def detect_mode() -> str:
     has_gcs = bool(os.getenv("GCS_BUCKET_NAME") or os.getenv("BUCKET_NAME"))
     if has_redis and has_gcs:
         return "production"
-    elif has_gcs:
-        return "development"
-    else:
-        return "local"
+
+    # Fall back to local to avoid accidentally running builds in development mode
+    return "local"
 
 
 def get_mode_config(mode: Optional[str] = None) -> ModeConfig:
@@ -139,7 +138,7 @@ def get_data_dir(mode_config: Optional[ModeConfig] = None) -> Path:
 def get_uploads_dir(mode_config: Optional[ModeConfig] = None) -> Path:
     """Get the uploads directory for the current mode."""
     data_dir = get_data_dir(mode_config)
-    uploads_dir = data_dir / "uploads" if mode_config and mode_config.mode == "local" else data_dir
+    uploads_dir = data_dir / "projects" if mode_config and mode_config.mode == "local" else data_dir
     uploads_dir.mkdir(parents=True, exist_ok=True)
     return uploads_dir
 

lorax/sockets/file_ops.py

@@ -22,6 +22,14 @@ from lorax.sockets.utils import is_csv_session_file
 UPLOAD_DIR = Path(UPLOADS_DIR)
 UPLOAD_DIR.mkdir(exist_ok=True)
 
+DEV_MODE = CURRENT_MODE == "development"
+
+
+def dev_print(*args, **kwargs):
+    """Print only when running in development mode."""
+    if DEV_MODE:
+        print(*args, **kwargs)
+
 
 def register_file_events(sio):
     """Register file operation socket events."""
@@ -32,7 +40,7 @@ def register_file_events(sio):
             share_sid = data.get("share_sid")
 
             if not lorax_sid:
-                print(f"⚠️ Missing lorax_sid")
+                dev_print(f"⚠️ Missing lorax_sid")
                 await sio.emit("error", {
                     "code": ERROR_MISSING_SESSION,
                     "message": "Session ID is missing."
@@ -41,7 +49,7 @@ def register_file_events(sio):
 
             session = await session_manager.get_session(lorax_sid)
             if not session:
-                print(f"⚠️ Unknown sid {lorax_sid}")
+                dev_print(f"⚠️ Unknown sid {lorax_sid}")
                 await sio.emit("error", {
                     "code": ERROR_SESSION_NOT_FOUND,
                     "message": "Session expired. Please refresh the page."
@@ -49,7 +57,7 @@ def register_file_events(sio):
                 return
 
             if share_sid and share_sid != lorax_sid:
-                print(f"⚠️ share_sid denied for sid={lorax_sid} target={share_sid}")
+                dev_print(f"⚠️ share_sid denied for sid={lorax_sid} target={share_sid}")
                 await sio.emit("error", {
                     "code": "share_sid_denied",
                     "message": "Access denied for shared upload."
@@ -62,16 +70,19 @@ def register_file_events(sio):
             # Extract genomic coordinates from client if provided
             genomiccoordstart = data.get("genomiccoordstart")
             genomiccoordend = data.get("genomiccoordend")
-            print("lorax_sid", lorax_sid, project, filename)
+            dev_print("lorax_sid", lorax_sid, project, filename)
             if not filename:
-                print("Missing file param")
+                dev_print("Missing file param")
                 return
 
+            gcs_allowed = True
             if project == 'Uploads':
                 target_sid = share_sid if share_sid else lorax_sid
                 if CURRENT_MODE == "local":
+                    # Local mode keeps uploads flat and does not pull uploads from GCS
                     file_path = UPLOAD_DIR / project / filename
                     blob_path = f"{project}/{filename}"
+                    gcs_allowed = False
                 else:
                     file_path = UPLOAD_DIR / project / target_sid / filename
                     blob_path = f"{project}/{target_sid}/{filename}"
@@ -79,17 +90,18 @@ def register_file_events(sio):
                 file_path = UPLOAD_DIR / project / filename
                 blob_path = f"{project}/{filename}"
 
-            if BUCKET_NAME and CURRENT_MODE != "local":
+            if BUCKET_NAME and gcs_allowed:
                 if file_path.exists():
-                    print(f"File {file_path} already exists, skipping download.")
+                    dev_print(f"File {file_path} already exists, skipping download.")
                 else:
-                    print(f"Downloading file {file_path} from {BUCKET_NAME}")
+                    dev_print(f"Downloading file {file_path} from {BUCKET_NAME}")
+                    print(f"[Lorax] Downloading gs://{BUCKET_NAME}/{blob_path} -> {file_path}")
                     await download_gcs_file(BUCKET_NAME, f"{blob_path}", str(file_path))
             else:
-                print("local mode or no bucket; using local uploads only")
+                dev_print("using local files (GCS disabled for this request)")
 
             if not file_path.exists():
-                print("File not found")
+                dev_print("File not found")
                 return
 
             # Clear TreeGraph cache when loading a new file
@@ -99,7 +111,7 @@ def register_file_events(sio):
             session.file_path = str(file_path)
             await session_manager.save_session(session)
 
-            print("loading file", file_path, os.getpid())
+            dev_print("loading file", file_path, os.getpid())
             ctx = await handle_upload(str(file_path), str(UPLOAD_DIR))
 
             await sio.emit("status", {
@@ -120,9 +132,9 @@ def register_file_events(sio):
             if genomiccoordstart is not None and genomiccoordend is not None:
                 try:
                     config['initial_position'] = [int(genomiccoordstart), int(genomiccoordend)]
-                    print(f"Using client-provided coordinates: [{genomiccoordstart}, {genomiccoordend}]")
+                    dev_print(f"Using client-provided coordinates: [{genomiccoordstart}, {genomiccoordend}]")
                 except (ValueError, TypeError) as e:
-                    print(f"Invalid coordinates, using computed: {e}")
+                    dev_print(f"Invalid coordinates, using computed: {e}")
 
             owner_sid = share_sid if share_sid else lorax_sid
             await sio.emit("load-file-result", {
@@ -134,7 +146,7 @@ def register_file_events(sio):
             }, to=sid)
 
         except Exception as e:
-            print(f"Load file error: {e}")
+            dev_print(f"Load file error: {e}")
             await sio.emit("error", {"message": str(e)}, to=sid)
 
     @sio.event
@@ -150,7 +162,7 @@ def register_file_events(sio):
                 return
 
             if not session.file_path:
-                print(f"⚠️ No file loaded for session {lorax_sid}")
+                dev_print(f"⚠️ No file loaded for session {lorax_sid}")
                 await sio.emit("error", {
                     "code": ERROR_NO_FILE_LOADED,
                     "message": "No file loaded. Please load a file first."
@@ -163,12 +175,12 @@ def register_file_events(sio):
                 }, to=sid)
                 return
 
-            print("fetch details in ", session.sid, os.getpid())
+            dev_print("fetch details in ", session.sid, os.getpid())
 
             result = await handle_details(session.file_path, data)
             await sio.emit("details-result", {"data": json.loads(result)}, to=sid)
         except Exception as e:
-            print(f"❌ Details error: {e}")
+            dev_print(f"❌ Details error: {e}")
             await sio.emit("details-result", {"error": str(e)}, to=sid)
 
     @sio.event
@@ -181,7 +193,7 @@ def register_file_events(sio):
                 return
 
             if not session.file_path:
-                print(f"⚠️ No file loaded for session {lorax_sid}")
+                dev_print(f"⚠️ No file loaded for session {lorax_sid}")
                 await sio.emit("error", {
                     "code": ERROR_NO_FILE_LOADED,
                     "message": "No file loaded. Please load a file first."
@@ -196,5 +208,5 @@ def register_file_events(sio):
                 "data": {"value": value, "localTrees": local_trees}
             }, to=sid)
         except Exception as e:
-            print(f"❌ Query error: {e}")
+            dev_print(f"❌ Query error: {e}")
             await sio.emit("query-result", {"error": str(e)}, to=sid)

{lorax_arg-0.1.dist-info → lorax_arg-0.1.1.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: lorax-arg
-Version: 0.1
+Version: 0.1.1
 Summary: Lorax single-port app (bundled UI + backend)
 Author: Lorax Team
 License: MIT

{lorax_arg-0.1.dist-info → lorax_arg-0.1.1.dist-info}/RECORD

@@ -6,7 +6,7 @@ lorax/handlers.py,sha256=PYuw_xq5-SsvSjAGURW0SnadyvjKr6Vct_0rQbtFsEw,32702
 lorax/lineage.py,sha256=BJo0vkYReyjT2CPwOzKNTZmKQLvPFDSxbJjRFRjhZzk,12955
 lorax/lorax_app.py,sha256=OabXITlMyPh-vO1qlFl90PRJbSKsw_M7xnlFXnOJVcg,2122
 lorax/manager.py,sha256=ARGZwVOo7dSGUIUeUVMeR0KugVeJdEbPD_torVQLE50,2232
-lorax/modes.py,sha256=ttDRnZecyeVGFu0UvI8dcIoO4BDAyTh7rDB94zKDi9c,5980
+lorax/modes.py,sha256=Yku8eI2_RCm-BuksmFKDeXf-QNk_tYZYktStqcjWVVY,6040
 lorax/pg.py,sha256=u-KPzmKr990-7euhTR7bENz5KvKD-FBX9zgJQNoMAlg,6500
 lorax/redis_utils.py,sha256=DqP-YwcCDAdmkERO6cDrr5X0PdrgzIK52Wm-ZTlalsU,725
 lorax/routes.py,sha256=zMjQ7XWKlNNRXNTyb7mArBiYYRdG4C9HGEiUw9MCCyM,4681
@@ -36,7 +36,7 @@ lorax/sockets/__init__.py,sha256=K6X2GyUha8yNhk1S4f4Q6NYhHwlmAprRLVcun1Cs0Ro,179
 lorax/sockets/connection.py,sha256=jKSJF5ToF260zbS24JiHVALIsFuv0kDP_R9ovVUc63g,3373
 lorax/sockets/debug.py,sha256=uUgnyAfhe1cwNMaEyPrWKqgtoxtHwy1n92ZEaHs8DRE,1374
 lorax/sockets/decorators.py,sha256=2QtG7VGIGSj38coDs7KbNjHUEqmvtR7sBobRlqntMjk,3785
-lorax/sockets/file_ops.py,sha256=UlVMghelzbl0w_OhmSFk5dQsBqu36zOTMse_6U-gNwI,7702
+lorax/sockets/file_ops.py,sha256=5Ercfsf15l58xsc-MfLb_9wX4L4uXGiB28IIZqaOps8,8195
 lorax/sockets/lineage.py,sha256=zfMal4X7ldG-e1PjQWbodgOfp2t5yiPlQGPVtGkW88A,10111
 lorax/sockets/metadata.py,sha256=3fgF80ez-riF2F7-M6bmBlilX10Lx1wUH__wY9y_Sww,9444
 lorax/sockets/mutations.py,sha256=kHafhth6DgI0Hss8HAIlhI8uqsddVlgkvfcV8RBuaME,5542
@@ -59,8 +59,8 @@ lorax_app/static/assets/localBackendWorker-BaWwjSV_.js,sha256=YW5js0UirOVb0YQPmK
 lorax_app/static/assets/renderDataWorker-BKLdiU7J.js,sha256=sghrouSnLrHUz3Pc7z_D-bc3PT1X0WdCi8_WHI2pHJY,4077
 lorax_app/static/gestures/gesture-flick.ogv,sha256=MVMT2CxgsnRBsR10WTptQe2vw8z2uGXQC7DC_2bqs4w,34638
 lorax_app/static/gestures/gesture-two-finger-scroll.ogv,sha256=E-IyviZeXmrm3FuwfAkEowEN0-IDh8zDikj36D0LVlo,39065
-lorax_arg-0.1.dist-info/METADATA,sha256=h0eLLsNhvoSoHqujCBbqctGLKGZMe3sCn5gb9hxvUZI,3598
-lorax_arg-0.1.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
-lorax_arg-0.1.dist-info/entry_points.txt,sha256=E2tGcqHnfNAyKE7np2CFCpgbJiIm7e-0vPLo1g2RNVA,107
-lorax_arg-0.1.dist-info/top_level.txt,sha256=midqTve5iv_2twMSjDj-HmJ_DePhUhLKtN-qtFaQyH4,16
-lorax_arg-0.1.dist-info/RECORD,,
+lorax_arg-0.1.1.dist-info/METADATA,sha256=JLzX21bF7h0Sm7hk2R84q_3vISUsVhNdtGSOo4KzoWY,3600
+lorax_arg-0.1.1.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
+lorax_arg-0.1.1.dist-info/entry_points.txt,sha256=E2tGcqHnfNAyKE7np2CFCpgbJiIm7e-0vPLo1g2RNVA,107
+lorax_arg-0.1.1.dist-info/top_level.txt,sha256=midqTve5iv_2twMSjDj-HmJ_DePhUhLKtN-qtFaQyH4,16
+lorax_arg-0.1.1.dist-info/RECORD,,