lingualabpy 0.1.0__py3-none-any.whl → 0.1.2__py3-none-any.whl

lingualabpy/_version.py

@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
 commit_id: COMMIT_ID
 __commit_id__: COMMIT_ID
 
-__version__ = version = '0.1.0'
-__version_tuple__ = version_tuple = (0, 1, 0)
+__version__ = version = '0.1.2'
+__version_tuple__ = version_tuple = (0, 1, 2)
 
 __commit_id__ = commit_id = None

lingualabpy/neuroimaging/hcp_connectome.py

@@ -87,10 +87,16 @@ class ConnectomeHcp2025(Connectome):
     default=5.0,
     help="full-width at half maximum in millimeters of the spatial smoothing to apply to the signal",
 )
+@click.option(
+    "--kind",
+    type=str,
+    default="correlation",
+    help="kind of functional connectivity matrices",
+)
 @click.argument("atlas_path", nargs=1, type=click.Path(exists=True))
 @click.argument("lut_path", nargs=1, type=click.Path(exists=True))
 @click.argument("rs_path", nargs=1, type=click.Path(exists=True))
-def main(atlas_path, lut_path, rs_path, output, smoothing_fwhm):
+def main(atlas_path, lut_path, rs_path, output, smoothing_fwhm, kind):
     """Process resting-state fMRI from the HCP-Young-Adult-2025 release to extract connectome.
 
     1. Validates input resting-state fMRI data structure
@@ -112,6 +118,8 @@ def main(atlas_path, lut_path, rs_path, output, smoothing_fwhm):
         output (str): Path to save results
 
         smoothing_fwhm (float): full-width at half maximum in millimeters of the spatial smoothing to apply to the signal
+
+        kind (str): kind of functional connectivity matrices
     """
     resting_state = ConnectomeHcp2025(path=Path(rs_path), output=Path(output))
 
@@ -125,7 +133,7 @@ def main(atlas_path, lut_path, rs_path, output, smoothing_fwhm):
     )
 
     correlation_measure = ConnectivityMeasure(
-        kind="correlation",
+        kind=kind,
         standardize=False,
         vectorize=False,
     )

lingualabpy/text/parser.py

@@ -17,6 +17,11 @@ def parse_waywithwords(document: Document) -> dict:
             content = para.text.split()
             speaker = content[0]
             transcription = " ".join(content[1:])
+
+            # Since 2026, some transcripts have `PA` for the interviewee.
+            # This check has been added to ensure backward compatibility.
+            if speaker == "PA":
+                speaker = "IE"
         except:
             speaker = None
 

{lingualabpy-0.1.0.dist-info → lingualabpy-0.1.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: lingualabpy
-Version: 0.1.0
+Version: 0.1.2
 Summary: Tools and utilities from the LINGUA laboratory
 Project-URL: Documentation, https://github.com/lingualab/lingualabpy
 Project-URL: Source, https://github.com/lingualab/lingualabpy

{lingualabpy-0.1.0.dist-info → lingualabpy-0.1.2.dist-info}/RECORD

@@ -1,5 +1,5 @@
 lingualabpy/__init__.py,sha256=KoUkh_Y5eCEDxIh8SaCL_jht5ebBIv7RuHyU-bu-uXk,685
-lingualabpy/_version.py,sha256=5jwwVncvCiTnhOedfkzzxmxsggwmTBORdFL_4wq0ZeY,704
+lingualabpy/_version.py,sha256=Ok5oAXdWgR9aghaFXTafTeDW6sYO3uVe6d2Nket57R4,704
 lingualabpy/io.py,sha256=-UXNXHgjy-W7h2h9fmZTe2glKm6tFNSgjLcGxcrVpEo,1106
 lingualabpy/plot.py,sha256=yfqKpS387u1TQaDINXatJhMr67J-q9k78EKrAnyBHlE,836
 lingualabpy/audio/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -12,15 +12,15 @@ lingualabpy/cli/docx2json.py,sha256=6c5CSAS0ru30aLIsD9lRfqiehrTHjmbPb_ICw5pi-6Y,
 lingualabpy/cli/jsons2csv.py,sha256=ASOHY2GjAn8G_qNyR0ZwQ_81_uakXjhwkCLOGGnLcMw,573
 lingualabpy/cli/plot_sound.py,sha256=DCK31EIN9IpirOw-Cb87k1U79dniFuNT8TWcGUBGh14,1603
 lingualabpy/neuroimaging/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-lingualabpy/neuroimaging/hcp_connectome.py,sha256=uVFz7yCHkSxIQIWZlvK11RqylUizVINmmuKRvBk5IM4,4945
+lingualabpy/neuroimaging/hcp_connectome.py,sha256=DM7KjXsnPjrvU0mMs7ys91vXNYDvsBgp8x5zts1_hOo,5129
 lingualabpy/text/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-lingualabpy/text/parser.py,sha256=A97YKH3syPrHrNgT7WD4IBsOFuM3IFEArOsyLWdJZeU,878
+lingualabpy/text/parser.py,sha256=EA2BGQ2RFgXYTOWzzoZuhhoFBK2THQNcPryZ2vY8KCg,1090
 lingualabpy/text/textgrid.py,sha256=X4R7gDLIM-xHEtvyqaXY8-72HY4kbpoWMPs2E5eQmhM,1418
 lingualabpy/tools/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 lingualabpy/tools/data.py,sha256=qzMHFhUTK59f4me646D6I8VNr0nF5xs53nTXtDCyTeU,1482
 lingualabpy/tools/interval.py,sha256=1wJO7sBB97GWRNvr5FmebOj7K33ZEn-nd2Xy9DY__Fg,2001
-lingualabpy-0.1.0.dist-info/METADATA,sha256=F6S6LBHVveLo7zH6a5FEVwfOam12ZFhC1m0elDwK_XY,2956
-lingualabpy-0.1.0.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
-lingualabpy-0.1.0.dist-info/entry_points.txt,sha256=iz_pd8DzlHRCT3x-j0ElQtC-ZrXjMZYCg14hgyRcb84,385
-lingualabpy-0.1.0.dist-info/licenses/LICENSE,sha256=c-I54KLO-TBc3-uz1_w3ru3Mf6RSEHnU5cbiIEuCRzw,1074
-lingualabpy-0.1.0.dist-info/RECORD,,
+lingualabpy-0.1.2.dist-info/METADATA,sha256=tPi_8YBJVgehSWhbxj_vKRZKwjyCM_de2PHUUDIImtA,2956
+lingualabpy-0.1.2.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
+lingualabpy-0.1.2.dist-info/entry_points.txt,sha256=iz_pd8DzlHRCT3x-j0ElQtC-ZrXjMZYCg14hgyRcb84,385
+lingualabpy-0.1.2.dist-info/licenses/LICENSE,sha256=c-I54KLO-TBc3-uz1_w3ru3Mf6RSEHnU5cbiIEuCRzw,1074
+lingualabpy-0.1.2.dist-info/RECORD,,