lingualabpy 0.0.6__py3-none-any.whl → 0.1.1__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- lingualabpy/__init__.py +25 -20
- lingualabpy/_version.py +34 -0
- lingualabpy/audio/metrics.py +85 -85
- lingualabpy/audio/triming.py +11 -11
- lingualabpy/cli/audio_metrics.py +59 -59
- lingualabpy/cli/audio_triming.py +48 -48
- lingualabpy/cli/docx2json.py +21 -21
- lingualabpy/cli/jsons2csv.py +23 -23
- lingualabpy/cli/plot_sound.py +55 -55
- lingualabpy/io.py +49 -49
- lingualabpy/neuroimaging/__init__.py +0 -0
- lingualabpy/neuroimaging/hcp_connectome.py +151 -0
- lingualabpy/plot.py +23 -23
- lingualabpy/text/parser.py +35 -35
- lingualabpy/text/textgrid.py +41 -41
- lingualabpy/tools/data.py +41 -41
- lingualabpy/tools/interval.py +59 -59
- lingualabpy-0.1.1.dist-info/METADATA +66 -0
- lingualabpy-0.1.1.dist-info/RECORD +26 -0
- {lingualabpy-0.0.6.dist-info → lingualabpy-0.1.1.dist-info}/WHEEL +1 -1
- lingualabpy-0.1.1.dist-info/entry_points.txt +7 -0
- {lingualabpy-0.0.6.dist-info → lingualabpy-0.1.1.dist-info/licenses}/LICENSE +21 -21
- lingualabpy/resources/FilledPauses.praat +0 -536
- lingualabpy/resources/syllablenucleiv3.praat +0 -0
- lingualabpy-0.0.6.dist-info/METADATA +0 -46
- lingualabpy-0.0.6.dist-info/RECORD +0 -25
- lingualabpy-0.0.6.dist-info/entry_points.txt +0 -7
lingualabpy/tools/interval.py
CHANGED
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@@ -1,59 +1,59 @@
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from textgrids import Interval
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def interval_to_list(interval: Interval) -> list[float]:
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""""""
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return [interval.xmin, interval.xmax]
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def is_overlap(interval0: Interval, interval1: Interval) -> bool:
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"""Check if two intervals overlap"""
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return interval0.xmin <= interval1.xmax and interval1.xmin <= interval0.xmax
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def remove_overlap(interval: Interval, interval_to_remove: Interval) -> list[Interval]:
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""""""
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# Return interval as a list if there is no overlap
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if not is_overlap(interval, interval_to_remove):
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return [interval]
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else:
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updated_intervals = []
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# If the start of the interval is before the start of the interval to be removed,
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# add the non-overlapping part to the result.
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if interval.xmin < interval_to_remove.xmin:
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updated_intervals.append(
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Interval(xmin=interval.xmin, xmax=interval_to_remove.xmin)
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)
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# If the end of the interval is after the end of the interval to be removed,
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# add the non-overlapping part to the result.
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if interval.xmax > interval_to_remove.xmax:
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updated_intervals.append(
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Interval(xmin=interval_to_remove.xmax, xmax=interval.xmax)
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)
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return updated_intervals
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def intervals_masking(
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intervals: list[Interval], intervals_mask: list[Interval]
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) -> list[list[float]]:
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""""""
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# Each intervals mask will be remove from all the intervals
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for interval_to_remove in intervals_mask:
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new_intervals = []
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for interval in intervals:
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# if the start of the interval is after the end of the mask
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# we can just add the interval they are sorted
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if interval.xmin > interval_to_remove.xmax:
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new_intervals.append(interval)
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else:
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new_intervals += remove_overlap(interval, interval_to_remove)
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intervals = new_intervals
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return [interval_to_list(_) for _ in intervals]
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from textgrids import Interval
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def interval_to_list(interval: Interval) -> list[float]:
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""""""
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return [interval.xmin, interval.xmax]
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def is_overlap(interval0: Interval, interval1: Interval) -> bool:
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"""Check if two intervals overlap"""
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return interval0.xmin <= interval1.xmax and interval1.xmin <= interval0.xmax
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def remove_overlap(interval: Interval, interval_to_remove: Interval) -> list[Interval]:
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""""""
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# Return interval as a list if there is no overlap
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if not is_overlap(interval, interval_to_remove):
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return [interval]
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else:
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updated_intervals = []
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# If the start of the interval is before the start of the interval to be removed,
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# add the non-overlapping part to the result.
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if interval.xmin < interval_to_remove.xmin:
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updated_intervals.append(
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Interval(xmin=interval.xmin, xmax=interval_to_remove.xmin)
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)
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# If the end of the interval is after the end of the interval to be removed,
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# add the non-overlapping part to the result.
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if interval.xmax > interval_to_remove.xmax:
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updated_intervals.append(
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Interval(xmin=interval_to_remove.xmax, xmax=interval.xmax)
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)
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return updated_intervals
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def intervals_masking(
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intervals: list[Interval], intervals_mask: list[Interval]
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) -> list[list[float]]:
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""""""
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# Each intervals mask will be remove from all the intervals
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for interval_to_remove in intervals_mask:
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new_intervals = []
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for interval in intervals:
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# if the start of the interval is after the end of the mask
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# we can just add the interval they are sorted
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if interval.xmin > interval_to_remove.xmax:
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new_intervals.append(interval)
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else:
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new_intervals += remove_overlap(interval, interval_to_remove)
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intervals = new_intervals
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return [interval_to_list(_) for _ in intervals]
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Metadata-Version: 2.4
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Name: lingualabpy
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Version: 0.1.1
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Summary: Tools and utilities from the LINGUA laboratory
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Project-URL: Documentation, https://github.com/lingualab/lingualabpy
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Project-URL: Source, https://github.com/lingualab/lingualabpy
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Project-URL: Tracker, https://github.com/lingualab/lingualabpy/issues
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Author-email: Christophe Bedetti <christophe.bedetti@umontreal.ca>
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License: MIT License
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Copyright (c) 2024 Lingua Laboratory
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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License-File: LICENSE
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Classifier: Development Status :: 3 - Alpha
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Classifier: Intended Audience :: Developers
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Classifier: Intended Audience :: Science/Research
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Classifier: License :: OSI Approved :: MIT License
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Classifier: Operating System :: MacOS :: MacOS X
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Classifier: Operating System :: Microsoft :: Windows
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Classifier: Operating System :: POSIX :: Linux
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Classifier: Programming Language :: Python :: 3 :: Only
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Classifier: Programming Language :: Python :: 3.8
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Classifier: Programming Language :: Python :: 3.9
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Classifier: Programming Language :: Python :: 3.10
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Topic :: Scientific/Engineering
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Requires-Python: >=3.8.1
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Requires-Dist: click
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Requires-Dist: matplotlib
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Requires-Dist: nilearn==0.12.1
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Requires-Dist: opencv-python
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Requires-Dist: pandas
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Requires-Dist: praat-parselmouth
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Requires-Dist: praat-textgrids
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Requires-Dist: pydub
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Requires-Dist: python-docx
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Provides-Extra: style
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Requires-Dist: black; extra == 'style'
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Requires-Dist: ruff; extra == 'style'
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Provides-Extra: test
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Requires-Dist: pytest; extra == 'test'
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Requires-Dist: pytest-cov; extra == 'test'
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Description-Content-Type: text/markdown
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# lingualabpy
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Tools and utilities from the LINGUA laboratory
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These tools are used in the pipeline [speechmetryflow](https://github.com/lingualab/speechmetryflow)
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lingualabpy/__init__.py,sha256=KoUkh_Y5eCEDxIh8SaCL_jht5ebBIv7RuHyU-bu-uXk,685
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lingualabpy/_version.py,sha256=m8HxkqoKGw_wAJtc4ZokpJKNLXqp4zwnNhbnfDtro7w,704
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lingualabpy/io.py,sha256=-UXNXHgjy-W7h2h9fmZTe2glKm6tFNSgjLcGxcrVpEo,1106
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lingualabpy/plot.py,sha256=yfqKpS387u1TQaDINXatJhMr67J-q9k78EKrAnyBHlE,836
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lingualabpy/audio/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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lingualabpy/audio/metrics.py,sha256=mPVLYrwxzbw1s8D_XHm0CHe4hrjhFz1GgUN5dmqoZbk,3417
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lingualabpy/audio/triming.py,sha256=Cz2EpjJO11czyAD-Y6gR2yDv95vIwSY_j8gu0nBheo4,277
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lingualabpy/cli/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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lingualabpy/cli/audio_metrics.py,sha256=p-3UNdg2GNl74A1aMh-iekLRivQ7VphKW5JDJ2ssZ9M,1744
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lingualabpy/cli/audio_triming.py,sha256=dNYFkcq13PNMJ4isdWJ32MBFAEKCXCWPXH_X5iH5eIQ,1518
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lingualabpy/cli/docx2json.py,sha256=6c5CSAS0ru30aLIsD9lRfqiehrTHjmbPb_ICw5pi-6Y,569
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lingualabpy/cli/jsons2csv.py,sha256=ASOHY2GjAn8G_qNyR0ZwQ_81_uakXjhwkCLOGGnLcMw,573
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lingualabpy/cli/plot_sound.py,sha256=DCK31EIN9IpirOw-Cb87k1U79dniFuNT8TWcGUBGh14,1603
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lingualabpy/neuroimaging/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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lingualabpy/neuroimaging/hcp_connectome.py,sha256=DM7KjXsnPjrvU0mMs7ys91vXNYDvsBgp8x5zts1_hOo,5129
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lingualabpy/text/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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lingualabpy/text/parser.py,sha256=A97YKH3syPrHrNgT7WD4IBsOFuM3IFEArOsyLWdJZeU,878
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lingualabpy/text/textgrid.py,sha256=X4R7gDLIM-xHEtvyqaXY8-72HY4kbpoWMPs2E5eQmhM,1418
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lingualabpy/tools/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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lingualabpy/tools/data.py,sha256=qzMHFhUTK59f4me646D6I8VNr0nF5xs53nTXtDCyTeU,1482
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lingualabpy/tools/interval.py,sha256=1wJO7sBB97GWRNvr5FmebOj7K33ZEn-nd2Xy9DY__Fg,2001
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lingualabpy-0.1.1.dist-info/METADATA,sha256=VJtbNEPGWjyX35bJYqXnShIO54Yzw8oSx7DFwDL0_NU,2956
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lingualabpy-0.1.1.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
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lingualabpy-0.1.1.dist-info/entry_points.txt,sha256=iz_pd8DzlHRCT3x-j0ElQtC-ZrXjMZYCg14hgyRcb84,385
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lingualabpy-0.1.1.dist-info/licenses/LICENSE,sha256=c-I54KLO-TBc3-uz1_w3ru3Mf6RSEHnU5cbiIEuCRzw,1074
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lingualabpy-0.1.1.dist-info/RECORD,,
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[console_scripts]
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lingualabpy_audio_metrics = lingualabpy.cli.audio_metrics:main
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lingualabpy_audio_triming = lingualabpy.cli.audio_triming:main
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lingualabpy_docx2json = lingualabpy.cli.docx2json:main
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lingualabpy_hcp_connectome = lingualabpy.neuroimaging.hcp_connectome:main
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lingualabpy_jsons2csv = lingualabpy.cli.jsons2csv:main
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lingualabpy_plot_sound = lingualabpy.cli.plot_sound:main
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MIT License
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Copyright (c) 2024 Lingua Laboratory
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of this software and associated documentation files (the "Software"), to deal
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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SOFTWARE.
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MIT License
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Copyright (c) 2024 Lingua Laboratory
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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