letta-nightly 0.8.17.dev20250723104501__py3-none-any.whl → 0.9.0.dev20250724081419__py3-none-any.whl

letta/services/agent_serialization_manager.py

@@ -0,0 +1,707 @@
+from datetime import datetime, timezone
+from typing import Dict, List
+
+from letta.errors import AgentFileExportError, AgentFileImportError
+from letta.helpers.pinecone_utils import should_use_pinecone
+from letta.log import get_logger
+from letta.schemas.agent import AgentState, CreateAgent
+from letta.schemas.agent_file import (
+    AgentFileSchema,
+    AgentSchema,
+    BlockSchema,
+    FileAgentSchema,
+    FileSchema,
+    GroupSchema,
+    ImportResult,
+    MessageSchema,
+    SourceSchema,
+    ToolSchema,
+)
+from letta.schemas.block import Block
+from letta.schemas.enums import FileProcessingStatus
+from letta.schemas.file import FileMetadata
+from letta.schemas.message import Message
+from letta.schemas.source import Source
+from letta.schemas.tool import Tool
+from letta.schemas.user import User
+from letta.services.agent_manager import AgentManager
+from letta.services.block_manager import BlockManager
+from letta.services.file_manager import FileManager
+from letta.services.file_processor.embedder.openai_embedder import OpenAIEmbedder
+from letta.services.file_processor.embedder.pinecone_embedder import PineconeEmbedder
+from letta.services.file_processor.file_processor import FileProcessor
+from letta.services.file_processor.parser.markitdown_parser import MarkitdownFileParser
+from letta.services.file_processor.parser.mistral_parser import MistralFileParser
+from letta.services.files_agents_manager import FileAgentManager
+from letta.services.group_manager import GroupManager
+from letta.services.mcp_manager import MCPManager
+from letta.services.message_manager import MessageManager
+from letta.services.source_manager import SourceManager
+from letta.services.tool_manager import ToolManager
+from letta.settings import settings
+from letta.utils import get_latest_alembic_revision
+
+logger = get_logger(__name__)
+
+
+class AgentSerializationManager:
+    """
+    Manages export and import of agent files between database and AgentFileSchema format.
+
+    Handles:
+    - ID mapping between database IDs and human-readable file IDs
+    - Coordination across multiple entity managers
+    - Transaction safety during imports
+    - Referential integrity validation
+    """
+
+    def __init__(
+        self,
+        agent_manager: AgentManager,
+        tool_manager: ToolManager,
+        source_manager: SourceManager,
+        block_manager: BlockManager,
+        group_manager: GroupManager,
+        mcp_manager: MCPManager,
+        file_manager: FileManager,
+        file_agent_manager: FileAgentManager,
+        message_manager: MessageManager,
+    ):
+        self.agent_manager = agent_manager
+        self.tool_manager = tool_manager
+        self.source_manager = source_manager
+        self.block_manager = block_manager
+        self.group_manager = group_manager
+        self.mcp_manager = mcp_manager
+        self.file_manager = file_manager
+        self.file_agent_manager = file_agent_manager
+        self.message_manager = message_manager
+        self.file_parser = MistralFileParser() if settings.mistral_api_key else MarkitdownFileParser()
+        self.using_pinecone = should_use_pinecone()
+
+        # ID mapping state for export
+        self._db_to_file_ids: Dict[str, str] = {}
+
+        # Counters for generating Stripe-style IDs
+        self._id_counters: Dict[str, int] = {
+            AgentSchema.__id_prefix__: 0,
+            GroupSchema.__id_prefix__: 0,
+            BlockSchema.__id_prefix__: 0,
+            FileSchema.__id_prefix__: 0,
+            SourceSchema.__id_prefix__: 0,
+            ToolSchema.__id_prefix__: 0,
+            MessageSchema.__id_prefix__: 0,
+            FileAgentSchema.__id_prefix__: 0,
+            # MCPServerSchema.__id_prefix__: 0,
+        }
+
+    def _reset_state(self):
+        """Reset internal state for a new operation"""
+        self._db_to_file_ids.clear()
+        for key in self._id_counters:
+            self._id_counters[key] = 0
+
+    def _generate_file_id(self, entity_type: str) -> str:
+        """Generate a Stripe-style ID for the given entity type"""
+        counter = self._id_counters[entity_type]
+        file_id = f"{entity_type}-{counter}"
+        self._id_counters[entity_type] += 1
+        return file_id
+
+    def _map_db_to_file_id(self, db_id: str, entity_type: str, allow_new: bool = True) -> str:
+        """Map a database UUID to a file ID, creating if needed (export only)"""
+        if db_id in self._db_to_file_ids:
+            return self._db_to_file_ids[db_id]
+
+        if not allow_new:
+            raise AgentFileExportError(
+                f"Unexpected new {entity_type} ID '{db_id}' encountered during conversion. "
+                f"All IDs should have been mapped during agent processing."
+            )
+
+        file_id = self._generate_file_id(entity_type)
+        self._db_to_file_ids[db_id] = file_id
+        return file_id
+
+    def _extract_unique_tools(self, agent_states: List[AgentState]) -> List:
+        """Extract unique tools across all agent states by ID"""
+        all_tools = []
+        for agent_state in agent_states:
+            if agent_state.tools:
+                all_tools.extend(agent_state.tools)
+
+        unique_tools = {}
+        for tool in all_tools:
+            unique_tools[tool.id] = tool
+
+        return sorted(unique_tools.values(), key=lambda x: x.name)
+
+    def _extract_unique_blocks(self, agent_states: List[AgentState]) -> List:
+        """Extract unique blocks across all agent states by ID"""
+        all_blocks = []
+        for agent_state in agent_states:
+            if agent_state.memory and agent_state.memory.blocks:
+                all_blocks.extend(agent_state.memory.blocks)
+
+        unique_blocks = {}
+        for block in all_blocks:
+            unique_blocks[block.id] = block
+
+        return sorted(unique_blocks.values(), key=lambda x: x.label)
+
+    async def _extract_unique_sources_and_files_from_agents(
+        self, agent_states: List[AgentState], actor: User, files_agents_cache: dict = None
+    ) -> tuple[List[Source], List[FileMetadata]]:
+        """Extract unique sources and files from agent states using bulk operations"""
+
+        all_source_ids = set()
+        all_file_ids = set()
+
+        for agent_state in agent_states:
+            files_agents = await self.file_agent_manager.list_files_for_agent(
+                agent_id=agent_state.id,
+                actor=actor,
+                is_open_only=False,
+                return_as_blocks=False,
+                per_file_view_window_char_limit=agent_state.per_file_view_window_char_limit,
+            )
+            # cache the results for reuse during conversion
+            if files_agents_cache is not None:
+                files_agents_cache[agent_state.id] = files_agents
+
+            for file_agent in files_agents:
+                all_source_ids.add(file_agent.source_id)
+                all_file_ids.add(file_agent.file_id)
+        sources = await self.source_manager.get_sources_by_ids_async(list(all_source_ids), actor)
+        files = await self.file_manager.get_files_by_ids_async(list(all_file_ids), actor, include_content=True)
+
+        return sources, files
+
+    async def _convert_agent_state_to_schema(self, agent_state: AgentState, actor: User, files_agents_cache: dict = None) -> AgentSchema:
+        """Convert AgentState to AgentSchema with ID remapping"""
+
+        agent_file_id = self._map_db_to_file_id(agent_state.id, AgentSchema.__id_prefix__)
+
+        # use cached file-agent data if available, otherwise fetch
+        if files_agents_cache is not None and agent_state.id in files_agents_cache:
+            files_agents = files_agents_cache[agent_state.id]
+        else:
+            files_agents = await self.file_agent_manager.list_files_for_agent(
+                agent_id=agent_state.id,
+                actor=actor,
+                is_open_only=False,
+                return_as_blocks=False,
+                per_file_view_window_char_limit=agent_state.per_file_view_window_char_limit,
+            )
+        agent_schema = await AgentSchema.from_agent_state(
+            agent_state, message_manager=self.message_manager, files_agents=files_agents, actor=actor
+        )
+        agent_schema.id = agent_file_id
+
+        if agent_schema.messages:
+            for message in agent_schema.messages:
+                message_file_id = self._map_db_to_file_id(message.id, MessageSchema.__id_prefix__)
+                message.id = message_file_id
+                message.agent_id = agent_file_id
+
+        if agent_schema.in_context_message_ids:
+            agent_schema.in_context_message_ids = [
+                self._map_db_to_file_id(message_id, MessageSchema.__id_prefix__, allow_new=False)
+                for message_id in agent_schema.in_context_message_ids
+            ]
+
+        if agent_schema.tool_ids:
+            agent_schema.tool_ids = [self._map_db_to_file_id(tool_id, ToolSchema.__id_prefix__) for tool_id in agent_schema.tool_ids]
+
+        if agent_schema.source_ids:
+            agent_schema.source_ids = [
+                self._map_db_to_file_id(source_id, SourceSchema.__id_prefix__) for source_id in agent_schema.source_ids
+            ]
+
+        if agent_schema.block_ids:
+            agent_schema.block_ids = [self._map_db_to_file_id(block_id, BlockSchema.__id_prefix__) for block_id in agent_schema.block_ids]
+
+        if agent_schema.files_agents:
+            for file_agent in agent_schema.files_agents:
+                file_agent.file_id = self._map_db_to_file_id(file_agent.file_id, FileSchema.__id_prefix__)
+                file_agent.source_id = self._map_db_to_file_id(file_agent.source_id, SourceSchema.__id_prefix__)
+                file_agent.agent_id = agent_file_id
+
+        return agent_schema
+
+    def _convert_tool_to_schema(self, tool) -> ToolSchema:
+        """Convert Tool to ToolSchema with ID remapping"""
+        tool_file_id = self._map_db_to_file_id(tool.id, ToolSchema.__id_prefix__, allow_new=False)
+        tool_schema = ToolSchema.from_tool(tool)
+        tool_schema.id = tool_file_id
+        return tool_schema
+
+    def _convert_block_to_schema(self, block) -> BlockSchema:
+        """Convert Block to BlockSchema with ID remapping"""
+        block_file_id = self._map_db_to_file_id(block.id, BlockSchema.__id_prefix__, allow_new=False)
+        block_schema = BlockSchema.from_block(block)
+        block_schema.id = block_file_id
+        return block_schema
+
+    def _convert_source_to_schema(self, source) -> SourceSchema:
+        """Convert Source to SourceSchema with ID remapping"""
+        source_file_id = self._map_db_to_file_id(source.id, SourceSchema.__id_prefix__, allow_new=False)
+        source_schema = SourceSchema.from_source(source)
+        source_schema.id = source_file_id
+        return source_schema
+
+    def _convert_file_to_schema(self, file_metadata) -> FileSchema:
+        """Convert FileMetadata to FileSchema with ID remapping"""
+        file_file_id = self._map_db_to_file_id(file_metadata.id, FileSchema.__id_prefix__, allow_new=False)
+        file_schema = FileSchema.from_file_metadata(file_metadata)
+        file_schema.id = file_file_id
+        file_schema.source_id = self._map_db_to_file_id(file_metadata.source_id, SourceSchema.__id_prefix__, allow_new=False)
+        return file_schema
+
+    async def export(self, agent_ids: List[str], actor: User) -> AgentFileSchema:
+        """
+        Export agents and their related entities to AgentFileSchema format.
+
+        Args:
+            agent_ids: List of agent UUIDs to export
+
+        Returns:
+            AgentFileSchema with all related entities
+
+        Raises:
+            AgentFileExportError: If export fails
+        """
+        try:
+            self._reset_state()
+
+            agent_states = await self.agent_manager.get_agents_by_ids_async(agent_ids=agent_ids, actor=actor)
+
+            # Validate that all requested agents were found
+            if len(agent_states) != len(agent_ids):
+                found_ids = {agent.id for agent in agent_states}
+                missing_ids = [agent_id for agent_id in agent_ids if agent_id not in found_ids]
+                raise AgentFileExportError(f"The following agent IDs were not found: {missing_ids}")
+
+            # cache for file-agent relationships to avoid duplicate queries
+            files_agents_cache = {}  # Maps agent_id to list of file_agent relationships
+
+            # Extract unique entities across all agents
+            tool_set = self._extract_unique_tools(agent_states)
+            block_set = self._extract_unique_blocks(agent_states)
+
+            # Extract sources and files from agent states BEFORE conversion (with caching)
+            source_set, file_set = await self._extract_unique_sources_and_files_from_agents(agent_states, actor, files_agents_cache)
+
+            # Convert to schemas with ID remapping (reusing cached file-agent data)
+            agent_schemas = [
+                await self._convert_agent_state_to_schema(agent_state, actor=actor, files_agents_cache=files_agents_cache)
+                for agent_state in agent_states
+            ]
+            tool_schemas = [self._convert_tool_to_schema(tool) for tool in tool_set]
+            block_schemas = [self._convert_block_to_schema(block) for block in block_set]
+            source_schemas = [self._convert_source_to_schema(source) for source in source_set]
+            file_schemas = [self._convert_file_to_schema(file_metadata) for file_metadata in file_set]
+
+            logger.info(f"Exporting {len(agent_ids)} agents to agent file format")
+
+            # Return AgentFileSchema with converted entities
+            return AgentFileSchema(
+                agents=agent_schemas,
+                groups=[],  # TODO: Extract and convert groups
+                blocks=block_schemas,
+                files=file_schemas,
+                sources=source_schemas,
+                tools=tool_schemas,
+                # mcp_servers=[],  # TODO: Extract and convert MCP servers
+                metadata={"revision_id": await get_latest_alembic_revision()},
+                created_at=datetime.now(timezone.utc),
+            )
+
+        except Exception as e:
+            logger.error(f"Failed to export agent file: {e}")
+            raise AgentFileExportError(f"Export failed: {e}") from e
+
+    async def import_file(self, schema: AgentFileSchema, actor: User, dry_run: bool = False) -> ImportResult:
+        """
+        Import AgentFileSchema into the database.
+
+        Args:
+            schema: The agent file schema to import
+            dry_run: If True, validate but don't commit changes
+
+        Returns:
+            ImportResult with success status and details
+
+        Raises:
+            AgentFileImportError: If import fails
+        """
+        try:
+            self._reset_state()
+
+            if dry_run:
+                logger.info("Starting dry run import validation")
+            else:
+                logger.info("Starting agent file import")
+
+            # Validate schema first
+            self._validate_schema(schema)
+
+            if dry_run:
+                return ImportResult(
+                    success=True,
+                    message="Dry run validation passed",
+                    imported_count=0,
+                )
+
+            # Import in dependency order
+            imported_count = 0
+            file_to_db_ids = {}  # Maps file IDs to new database IDs
+            # in-memory cache for file metadata to avoid repeated db calls
+            file_metadata_cache = {}  # Maps database file ID to FileMetadata
+
+            # 1. Create tools first (no dependencies) - using bulk upsert for efficiency
+            if schema.tools:
+                # convert tool schemas to pydantic tools
+                pydantic_tools = []
+                for tool_schema in schema.tools:
+                    pydantic_tools.append(Tool(**tool_schema.model_dump(exclude={"id"})))
+
+                # bulk upsert all tools at once
+                created_tools = await self.tool_manager.bulk_upsert_tools_async(pydantic_tools, actor)
+
+                # map file ids to database ids
+                # note: tools are matched by name during upsert, so we need to match by name here too
+                created_tools_by_name = {tool.name: tool for tool in created_tools}
+                for tool_schema in schema.tools:
+                    created_tool = created_tools_by_name.get(tool_schema.name)
+                    if created_tool:
+                        file_to_db_ids[tool_schema.id] = created_tool.id
+                        imported_count += 1
+                    else:
+                        logger.warning(f"Tool {tool_schema.name} was not created during bulk upsert")
+
+            # 2. Create blocks (no dependencies) - using batch create for efficiency
+            if schema.blocks:
+                # convert block schemas to pydantic blocks (excluding IDs to create new blocks)
+                pydantic_blocks = []
+                for block_schema in schema.blocks:
+                    pydantic_blocks.append(Block(**block_schema.model_dump(exclude={"id"})))
+
+                # batch create all blocks at once
+                created_blocks = await self.block_manager.batch_create_blocks_async(pydantic_blocks, actor)
+
+                # map file ids to database ids
+                for block_schema, created_block in zip(schema.blocks, created_blocks):
+                    file_to_db_ids[block_schema.id] = created_block.id
+                    imported_count += 1
+
+            # 3. Create sources (no dependencies) - using bulk upsert for efficiency
+            if schema.sources:
+                # convert source schemas to pydantic sources
+                pydantic_sources = []
+                for source_schema in schema.sources:
+                    source_data = source_schema.model_dump(exclude={"id", "embedding", "embedding_chunk_size"})
+                    pydantic_sources.append(Source(**source_data))
+
+                # bulk upsert all sources at once
+                created_sources = await self.source_manager.bulk_upsert_sources_async(pydantic_sources, actor)
+
+                # map file ids to database ids
+                # note: sources are matched by name during upsert, so we need to match by name here too
+                created_sources_by_name = {source.name: source for source in created_sources}
+                for source_schema in schema.sources:
+                    created_source = created_sources_by_name.get(source_schema.name)
+                    if created_source:
+                        file_to_db_ids[source_schema.id] = created_source.id
+                        imported_count += 1
+                    else:
+                        logger.warning(f"Source {source_schema.name} was not created during bulk upsert")
+
+            # 4. Create files (depends on sources)
+            for file_schema in schema.files:
+                # Convert FileSchema back to FileMetadata
+                file_data = file_schema.model_dump(exclude={"id", "content"})
+                # Remap source_id from file ID to database ID
+                file_data["source_id"] = file_to_db_ids[file_schema.source_id]
+                # Set processing status to PARSING since we have parsed content but need to re-embed
+                file_data["processing_status"] = FileProcessingStatus.PARSING
+                file_data["error_message"] = None
+                file_data["total_chunks"] = None
+                file_data["chunks_embedded"] = None
+                file_metadata = FileMetadata(**file_data)
+                created_file = await self.file_manager.create_file(file_metadata, actor, text=file_schema.content)
+                file_to_db_ids[file_schema.id] = created_file.id
+                imported_count += 1
+
+            # 5. Process files for chunking/embedding (depends on files and sources)
+            if should_use_pinecone():
+                embedder = PineconeEmbedder(embedding_config=schema.agents[0].embedding_config)
+            else:
+                embedder = OpenAIEmbedder(embedding_config=schema.agents[0].embedding_config)
+            file_processor = FileProcessor(
+                file_parser=self.file_parser,
+                embedder=embedder,
+                actor=actor,
+                using_pinecone=self.using_pinecone,
+            )
+
+            for file_schema in schema.files:
+                if file_schema.content:  # Only process files with content
+                    file_db_id = file_to_db_ids[file_schema.id]
+                    source_db_id = file_to_db_ids[file_schema.source_id]
+
+                    # Get the created file metadata (with caching)
+                    if file_db_id not in file_metadata_cache:
+                        file_metadata_cache[file_db_id] = await self.file_manager.get_file_by_id(file_db_id, actor)
+                    file_metadata = file_metadata_cache[file_db_id]
+
+                    # Save the db call of fetching content again
+                    file_metadata.content = file_schema.content
+
+                    # Process the file for chunking/embedding
+                    passages = await file_processor.process_imported_file(file_metadata=file_metadata, source_id=source_db_id)
+                    imported_count += len(passages)
+
+            # 6. Create agents with empty message history
+            for agent_schema in schema.agents:
+                # Convert AgentSchema back to CreateAgent, remapping tool/block IDs
+                agent_data = agent_schema.model_dump(exclude={"id", "in_context_message_ids", "messages"})
+
+                # Remap tool_ids from file IDs to database IDs
+                if agent_data.get("tool_ids"):
+                    agent_data["tool_ids"] = [file_to_db_ids[file_id] for file_id in agent_data["tool_ids"]]
+
+                # Remap block_ids from file IDs to database IDs
+                if agent_data.get("block_ids"):
+                    agent_data["block_ids"] = [file_to_db_ids[file_id] for file_id in agent_data["block_ids"]]
+
+                agent_create = CreateAgent(**agent_data)
+                created_agent = await self.agent_manager.create_agent_async(agent_create, actor, _init_with_no_messages=True)
+                file_to_db_ids[agent_schema.id] = created_agent.id
+                imported_count += 1
+
+            # 7. Create messages and update agent message_ids
+            for agent_schema in schema.agents:
+                agent_db_id = file_to_db_ids[agent_schema.id]
+                message_file_to_db_ids = {}
+
+                # Create messages for this agent
+                messages = []
+                for message_schema in agent_schema.messages:
+                    # Convert MessageSchema back to Message, setting agent_id to new DB ID
+                    message_data = message_schema.model_dump(exclude={"id"})
+                    message_data["agent_id"] = agent_db_id  # Remap agent_id to new database ID
+                    message_obj = Message(**message_data)
+                    messages.append(message_obj)
+                    # Map file ID to the generated database ID immediately
+                    message_file_to_db_ids[message_schema.id] = message_obj.id
+
+                created_messages = await self.message_manager.create_many_messages_async(pydantic_msgs=messages, actor=actor)
+                imported_count += len(created_messages)
+
+                # Remap in_context_message_ids from file IDs to database IDs
+                in_context_db_ids = [message_file_to_db_ids[message_schema_id] for message_schema_id in agent_schema.in_context_message_ids]
+
+                # Update agent with the correct message_ids
+                await self.agent_manager.update_message_ids_async(agent_id=agent_db_id, message_ids=in_context_db_ids, actor=actor)
+
+            # 8. Create file-agent relationships (depends on agents and files)
+            for agent_schema in schema.agents:
+                if agent_schema.files_agents:
+                    agent_db_id = file_to_db_ids[agent_schema.id]
+
+                    # Prepare files for bulk attachment
+                    files_for_agent = []
+                    visible_content_map = {}
+
+                    for file_agent_schema in agent_schema.files_agents:
+                        file_db_id = file_to_db_ids[file_agent_schema.file_id]
+
+                        # Use cached file metadata if available
+                        if file_db_id not in file_metadata_cache:
+                            file_metadata_cache[file_db_id] = await self.file_manager.get_file_by_id(file_db_id, actor)
+                        file_metadata = file_metadata_cache[file_db_id]
+                        files_for_agent.append(file_metadata)
+
+                        if file_agent_schema.visible_content:
+                            visible_content_map[file_db_id] = file_agent_schema.visible_content
+
+                    # Bulk attach files to agent
+                    await self.file_agent_manager.attach_files_bulk(
+                        agent_id=agent_db_id,
+                        files_metadata=files_for_agent,
+                        visible_content_map=visible_content_map,
+                        actor=actor,
+                        max_files_open=agent_schema.max_files_open,
+                    )
+                    imported_count += len(files_for_agent)
+
+            return ImportResult(
+                success=True,
+                message=f"Import completed successfully. Imported {imported_count} entities.",
+                imported_count=imported_count,
+                id_mappings=file_to_db_ids,
+            )
+
+        except Exception as e:
+            logger.exception(f"Failed to import agent file: {e}")
+            raise AgentFileImportError(f"Import failed: {e}") from e
+
+    def _validate_id_format(self, schema: AgentFileSchema) -> List[str]:
+        """Validate that all IDs follow the expected format"""
+        errors = []
+
+        # Define entity types and their expected prefixes
+        entity_checks = [
+            (schema.agents, AgentSchema.__id_prefix__),
+            (schema.groups, GroupSchema.__id_prefix__),
+            (schema.blocks, BlockSchema.__id_prefix__),
+            (schema.files, FileSchema.__id_prefix__),
+            (schema.sources, SourceSchema.__id_prefix__),
+            (schema.tools, ToolSchema.__id_prefix__),
+        ]
+
+        for entities, expected_prefix in entity_checks:
+            for entity in entities:
+                if not entity.id.startswith(f"{expected_prefix}-"):
+                    errors.append(f"Invalid ID format: {entity.id} should start with '{expected_prefix}-'")
+                else:
+                    # Check that the suffix is a valid integer
+                    try:
+                        suffix = entity.id[len(expected_prefix) + 1 :]
+                        int(suffix)
+                    except ValueError:
+                        errors.append(f"Invalid ID format: {entity.id} should have integer suffix")
+
+        # Also check message IDs within agents
+        for agent in schema.agents:
+            for message in agent.messages:
+                if not message.id.startswith(f"{MessageSchema.__id_prefix__}-"):
+                    errors.append(f"Invalid message ID format: {message.id} should start with '{MessageSchema.__id_prefix__}-'")
+                else:
+                    # Check that the suffix is a valid integer
+                    try:
+                        suffix = message.id[len(MessageSchema.__id_prefix__) + 1 :]
+                        int(suffix)
+                    except ValueError:
+                        errors.append(f"Invalid message ID format: {message.id} should have integer suffix")
+
+        return errors
+
+    def _validate_duplicate_ids(self, schema: AgentFileSchema) -> List[str]:
+        """Validate that there are no duplicate IDs within or across entity types"""
+        errors = []
+        all_ids = set()
+
+        # Check each entity type for internal duplicates and collect all IDs
+        entity_collections = [
+            ("agents", schema.agents),
+            ("groups", schema.groups),
+            ("blocks", schema.blocks),
+            ("files", schema.files),
+            ("sources", schema.sources),
+            ("tools", schema.tools),
+        ]
+
+        for entity_type, entities in entity_collections:
+            entity_ids = [entity.id for entity in entities]
+
+            # Check for duplicates within this entity type
+            seen = set()
+            duplicates = set()
+            for entity_id in entity_ids:
+                if entity_id in seen:
+                    duplicates.add(entity_id)
+                else:
+                    seen.add(entity_id)
+
+            if duplicates:
+                errors.append(f"Duplicate {entity_type} IDs found: {duplicates}")
+
+            # Check for duplicates across all entity types
+            for entity_id in entity_ids:
+                if entity_id in all_ids:
+                    errors.append(f"Duplicate ID across entity types: {entity_id}")
+                all_ids.add(entity_id)
+
+        # Also check message IDs within agents
+        for agent in schema.agents:
+            message_ids = [msg.id for msg in agent.messages]
+
+            # Check for duplicates within agent messages
+            seen = set()
+            duplicates = set()
+            for message_id in message_ids:
+                if message_id in seen:
+                    duplicates.add(message_id)
+                else:
+                    seen.add(message_id)
+
+            if duplicates:
+                errors.append(f"Duplicate message IDs in agent {agent.id}: {duplicates}")
+
+            # Check for duplicates across all entity types
+            for message_id in message_ids:
+                if message_id in all_ids:
+                    errors.append(f"Duplicate ID across entity types: {message_id}")
+                all_ids.add(message_id)
+
+        return errors
+
+    def _validate_file_source_references(self, schema: AgentFileSchema) -> List[str]:
+        """Validate that all file source_id references exist"""
+        errors = []
+        source_ids = {source.id for source in schema.sources}
+
+        for file in schema.files:
+            if file.source_id not in source_ids:
+                errors.append(f"File {file.id} references non-existent source {file.source_id}")
+
+        return errors
+
+    def _validate_file_agent_references(self, schema: AgentFileSchema) -> List[str]:
+        """Validate that all file-agent relationships reference existing entities"""
+        errors = []
+        file_ids = {file.id for file in schema.files}
+        source_ids = {source.id for source in schema.sources}
+        {agent.id for agent in schema.agents}
+
+        for agent in schema.agents:
+            for file_agent in agent.files_agents:
+                if file_agent.file_id not in file_ids:
+                    errors.append(f"File-agent relationship references non-existent file {file_agent.file_id}")
+                if file_agent.source_id not in source_ids:
+                    errors.append(f"File-agent relationship references non-existent source {file_agent.source_id}")
+                if file_agent.agent_id != agent.id:
+                    errors.append(f"File-agent relationship has mismatched agent_id {file_agent.agent_id} vs {agent.id}")
+
+        return errors
+
+    def _validate_schema(self, schema: AgentFileSchema):
+        """
+        Validate the agent file schema for consistency and referential integrity.
+
+        Args:
+            schema: The schema to validate
+
+        Raises:
+            AgentFileImportError: If validation fails
+        """
+        errors = []
+
+        # 1. ID Format Validation
+        errors.extend(self._validate_id_format(schema))
+
+        # 2. Duplicate ID Detection
+        errors.extend(self._validate_duplicate_ids(schema))
+
+        # 3. File Source Reference Validation
+        errors.extend(self._validate_file_source_references(schema))
+
+        # 4. File-Agent Reference Validation
+        errors.extend(self._validate_file_agent_references(schema))
+
+        if errors:
+            raise AgentFileImportError(f"Schema validation failed: {'; '.join(errors)}")
+
+        logger.info("Schema validation passed")