lavavu-osmesa 1.8.75__cp311-cp311-manylinux_2_28_x86_64.whl → 1.8.78__cp311-cp311-manylinux_2_28_x86_64.whl

lavavu/LavaVuPython.py

@@ -1,5 +1,5 @@
 # This file was automatically generated by SWIG (https://www.swig.org).
-# Version 4.1.0
+# Version 4.2.0
 #
 # Do not make changes to this file unless you know what you are doing - modify
 # the SWIG interface file instead.

lavavu/convert.py

@@ -110,10 +110,10 @@ def points_to_volume_histogram(verts, weights, res=8, normed=True, clamp=None, b
 
     #H, edges = numpy.histogramdd(verts, bins=RES)
     if boundingbox is None:
-        H, edges = numpy.histogramdd(verts, weights=weights, bins=RES, normed=normed) #density=True for newer numpy
+        H, edges = numpy.histogramdd(verts, weights=weights, bins=RES, density=normed) #density=True for newer numpy
     else:
         rg = ((vmin[0], vmax[0]), (vmin[1], vmax[1]), (vmin[2], vmax[2])) #provide bounding box as range
-        H, edges = numpy.histogramdd(verts, weights=weights, bins=RES, range=rg, normed=normed) #density=True for newer numpy
+        H, edges = numpy.histogramdd(verts, weights=weights, bins=RES, range=rg, density=normed) #density=True for newer numpy
 
     #Reverse ordering X,Y,Z to Z,Y,X for volume data
     values = H.transpose()

lavavu/html/webview.html

@@ -27,7 +27,7 @@
 
     <input id="fileinput" type="file" style="visibility:hidden" onchange="useFileInput(this)" />
 
-    <script async src="https://cdn.jsdelivr.net/gh/lavavu/lavavu.github.io@1.8.75/LavaVu-amalgamated.min.js"></script>
+    <script async src="https://cdn.jsdelivr.net/gh/lavavu/lavavu.github.io@1.8.78/LavaVu-amalgamated.min.js"></script>
     <!--script src="dat.gui.min.js"></script>
     <script src="OK-min.js"></script>
 

lavavu/lavavu.py

@@ -166,6 +166,37 @@ def _convert(data, dtype=None):
 
     return data
 
+def is_documented_by(original):
+    def wrapper(target):
+        target.__doc__ = original.__doc__
+        return target
+    return wrapper
+
+def _brightness_contrast_saturation(target, brightness=0.5, contrast=0.5, saturation=0.5):
+    """
+    Set brightness, contrast and saturation in the range [0,1]
+    Zero is minimum level
+    0.5 is default, normal setting
+    1 is maximum level
+
+    Parameters
+    ----------
+    brightness : float
+        Brightness level from 0 to 1, converts to lavavu brightness in range [-1,1]
+        0 is full black, 0.5 is normal and 1.0 is full white
+    contrast : float
+        Contrast level from 0 to 1, converts to lavavu contrast in range [0,2]
+        0 is grey, 0.5 is normal and 1.0 is maximum contrast
+    saturation : float
+        Saturation level from 0 to 1, converts to lavavu saturation in range [0,2]
+        0 is greyscale, 0.5 is normal and 1.0 is maximum over-saturation
+    """
+    #Brightness in shader is [-1,1] where 0 is default
+    target["brightness"] = brightness * 2.0 - 1.0
+    #Contrast and saturation range from [0,2] where 1 is default
+    target["contrast"] = contrast * 2.0
+    target["saturation"] = saturation * 2.0
+
 def grid2d(corners=((0.,1.), (1.,0.)), dims=[2,2]):
     """
     Generate a 2d grid of vertices
@@ -1102,7 +1133,7 @@ class Object(dict):
 
         self._loadScalar(data, LavaVuPython.lucLuminanceData, width, height, depth)
 
-    def texture(self, data=None, flip=True, filter=2, bgr=False):
+    def texture(self, data=None, flip=True, filter=2, bgr=False, label=""):
         """
         Load or clear texture data for object
 
@@ -1116,6 +1147,10 @@ class Object(dict):
             either (height, width, channels) for RGB(A) image
             or (height, width) for single channel grayscale image
             Pass a string to load a texture from given filename
+        label : string
+            Optional label to load a custom texture by name of uniform used
+            If provided, will attempt to find the texture by this label and replace its data
+            If not provided, will use the default/primary texture for the object
         flip : boolean
             flip the texture vertically after loading
             (default is enabled as usually required for OpenGL but can be disabled)
@@ -1129,7 +1164,7 @@ class Object(dict):
             self.parent.app.clearTexture(self.ref)
             return
         if isinstance(data, str):
-            self.parent.app.setTexture(self.ref, data, flip, filter, bgr)
+            self.parent.app.setTexture(self.ref, data, flip, filter, bgr, label)
             return
 
         data = _convert(data)
@@ -1145,9 +1180,9 @@ class Object(dict):
         if data.dtype == numpy.float32:
             data = _convert(data, numpy.uint8)
         if data.dtype == numpy.uint32:
-            self.parent.app.textureUInt(self.ref, data.ravel(), width, height, channels, flip, filter, bgr)
+            self.parent.app.textureUInt(self.ref, data.ravel(), width, height, channels, flip, filter, bgr, label)
         elif data.dtype == numpy.uint8:
-            self.parent.app.textureUChar(self.ref, data.ravel(), width, height, channels, flip, filter, bgr)
+            self.parent.app.textureUChar(self.ref, data.ravel(), width, height, channels, flip, filter, bgr, label)
 
     def labels(self, data):
         """
@@ -1593,6 +1628,10 @@ class Object(dict):
         """
         self.parent.export_mesh(filepath, [self], rgba)
 
+    @is_documented_by(_brightness_contrast_saturation)
+    def brightness_contrast_saturation(self, brightness=0, contrast=0, saturation=0):
+        return _brightness_contrast_saturation(self)
+
 #Wrapper dict+list of objects
 class _Objects(dict):
     """  
@@ -1901,7 +1940,7 @@ class ColourMap(dict):
             Convert to greyscale
         """
         if data is not None:
-            if isinstance(data, str) and re.match('^[\w_]+$', data) is not None:
+            if isinstance(data, str) and re.match(r'^[\w_]+$', data) is not None:
                 #Single word of alphanumeric characters, if not a built-in map, try matplotlib
                 if data not in self.parent.defaultcolourmaps():
                     newdata = matplotlib_colourmap(data)
@@ -2280,29 +2319,29 @@ class _LavaVuWrapper(LavaVuPython.LavaVu):
                 if _LavaVuWrapper._ctx:
                     self.ctx = _LavaVuWrapper._ctx
                 else:
-                    self.ctx = moderngl.create_standalone_context(require=330)
+                    import platform
+                    if platform.system() == 'Linux':
+                        self.ctx = moderngl.create_context(standalone=True, require=330, backend='egl')
+                    else:
+                        self.ctx = moderngl.create_standalone_context(require=330)
+                    #print(self.ctx.info)
                     _LavaVuWrapper._ctx = self.ctx
 
             if self.use_moderngl_window and self.ctx:
                 # Activate the context
                 moderngl_window.activate_context(ctx=self.ctx)
-                if self.use_moderngl_window == 'window':
-                    # Configure with default window class / settings
-                    from moderngl_window.conf import settings
-                    settings.WINDOW['gl_version'] = (3, 3)
-                    settings.WINDOW['samples'] = 4
-                    if self.resolution:
-                        settings.WINDOW['size'] = self.resolution
-                    # Creates the window instance and activates its context
-                    self.wnd = moderngl_window.create_window_from_settings()
-                else:
-                    # Configure to use provided window class
-                    window_str = 'moderngl_window.context.' + self.use_moderngl_window + '.Window'
-                    window_cls = moderngl_window.get_window_cls(window_str)
-                    if self.resolution:
-                        self.wnd = window_cls(title="LavaVu", gl_version=(3, 3), samples=4, vsync=True, cursor=True, size=self.resolution)
-                    else:
-                        self.wnd = window_cls(title="LavaVu", gl_version=(3, 3), samples=4, vsync=True, cursor=True)
+
+                # Configure with default window class / settings
+                from moderngl_window.conf import settings
+                settings.WINDOW['gl_version'] = (3, 3)
+                if self.use_moderngl_window != 'window':
+                    #Use specified class
+                    settings.WINDOW['class'] = f'moderngl_window.context.{self.use_moderngl_window}.Window'
+                settings.WINDOW['samples'] = 4
+                if self.resolution:
+                    settings.WINDOW['size'] = self.resolution
+                # Creates the window instance and activates its context
+                self.wnd = moderngl_window.create_window_from_settings()
 
                 # register event methods
                 self.wnd.resize_func = self.resized
@@ -3656,6 +3695,56 @@ class Viewer(dict):
         else:
             return c.tolist()
 
+    def texture(self, label, data=None, flip=True, filter=2, bgr=False):
+        """
+        Load or clear global/shared texture data
+
+        Parameters
+        ----------
+        label : string
+            Label to load a custom texture by name of uniform used
+            Will attempt to find the texture by this label and replace its data
+        data : list or array or string
+            (If data is not provided, the object's texture data will be cleared)
+            Pass a list or numpy uint32 or uint8 array
+            texture data is loaded as raw image data
+            shape of array must be 2d or 3d,
+            either (height, width, channels) for RGB(A) image
+            or (height, width) for single channel grayscale image
+            Pass a string to load a texture from given filename
+        flip : boolean
+            flip the texture vertically after loading
+            (default is enabled as usually required for OpenGL but can be disabled)
+        filter : int
+            type of filtering, 0=None/nearest, 1=linear, 2=mipmap linear
+        bgr : boolean
+            rgb data is in BGR/BGRA format instead of RGB/RGBA
+        """
+        if data is None:
+            #Clear texture
+            self.app.clearTexture(None, label)
+            return
+        if isinstance(data, str):
+            self.app.setTexture(None, data, flip, filter, bgr, label)
+            return
+
+        data = _convert(data)
+        if len(data.shape) < 2:
+            raise ValueError(data.shape + " : Must pass a 2D or 3D data set")
+        if len(data.shape) < 3:
+            height, width = data.shape
+            channels = 1
+        else:
+            height, width, channels = data.shape
+
+        #Convert floating point data
+        if data.dtype == numpy.float32:
+            data = _convert(data, numpy.uint8)
+        if data.dtype == numpy.uint32:
+            self.app.textureUInt(None, data.ravel(), width, height, channels, flip, filter, bgr, label)
+        elif data.dtype == numpy.uint8:
+            self.app.textureUChar(None, data.ravel(), width, height, channels, flip, filter, bgr, label)
+
     def clear(self, objects=True, colourmaps=True):
         """
         Clears all data from the visualisation
@@ -4652,6 +4741,59 @@ class Viewer(dict):
             self.render()
         convert.export_any(filepath, objects)
 
+    @is_documented_by(_brightness_contrast_saturation)
+    def brightness_contrast_saturation(self, brightness=0, contrast=0, saturation=0):
+        return _brightness_contrast_saturation(self, brightness, contrast, saturation)
+
+    def set_properties(self, objects=None, **kwargs):
+        """
+        Set properties on viewer or on a set of objects by name
+
+        Parameters
+        ----------
+        objects : list
+            List of objects or object names, if not provided the properties will be applied globally to the Viewer itself
+        **kwargs :
+            key=value property names and values to set
+        """
+        if objects is None:
+            for key in kwargs:
+                self[key] = kwargs[key]
+        else:
+            for o in objects:
+                if isinstance(o, str):
+                    obj = self.objects[o]
+                else:
+                    obj = o
+                for key in kwargs:
+                    obj[key] = kwargs[key]
+
+    def set_uniforms(self, objects=None, **kwargs):
+        """
+        Set uniform variables on a set of objects by name or all objects
+        Uniforms are parameters sent directly to the shader program and can have any
+        valid GLSL variable name, it just needs to match the declaration in the shader
+
+        Parameters
+        ----------
+        objects : list
+            List of objects or object names, if not provided the full object list will be iterated
+        **kwargs :
+            key=value uniform names and values to set
+        """
+        if objects == None: objects = self.objects.list
+        if not isinstance(objects, list):
+            objects = [objects]
+        for o in objects:
+            if isinstance(o, str):
+                obj = self.objects[o]
+            else:
+                obj = o
+            uniforms = obj['uniforms']
+            for key in kwargs:
+                uniforms[key] = kwargs[key]
+            obj['uniforms'] = uniforms
+
 #Wrapper for list of geomdata objects
 class Geometry(list):
     """  
@@ -5278,7 +5420,7 @@ class Video(object):
     def __exit__(self, exc_type, exc_value, exc_traceback):
         self.stop()
         if exc_value == None:
-            print('Recording complete, filename: ', self.filename)
+            #print('Recording complete, filename: ', self.filename)
             self.play()
         else:
             print('Recording failed: ', exc_value)

lavavu/vutils.py

@@ -81,15 +81,10 @@ def download(url, filename=None, overwrite=False, quiet=False):
     filename : str
         Actual filename written to local filesystem
     """
-    #Python 3 moved modules
-    try:
-        from urllib.request import urlopen, URLError, HTTPError, Request
-        from urllib.parse import urlparse
-        from urllib.parse import quote
-    except ImportError:
-        from urllib2 import urlopen, URLError, HTTPError, Request
-        from urllib import quote
-        from urlparse import urlparse
+    from urllib.request import urlopen, URLError, HTTPError, Request
+    from urllib.parse import urlparse
+    from urllib.parse import quote
+    import http.client
 
     if filename is None:
         filename = url[url.rfind("/")+1:]

{lavavu_osmesa-1.8.75.dist-info → lavavu_osmesa-1.8.78.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: lavavu-osmesa
-Version: 1.8.75
+Version: 1.8.78
 Summary: Python interface to LavaVu OpenGL 3D scientific visualisation utilities
 Author-email: Owen Kaluza <owen@kaluza.id.au>
 License: ### Licensing
@@ -212,7 +212,7 @@ Classifier: Framework :: IPython
 Requires-Python: >=3.5
 Description-Content-Type: text/markdown
 License-File: LICENSE.md
-Requires-Dist: numpy >=1.18
+Requires-Dist: numpy>=1.18
 Requires-Dist: aiohttp
 Requires-Dist: jupyter-server-proxy
 
@@ -221,7 +221,7 @@ Requires-Dist: jupyter-server-proxy
 [![Build Status](https://github.com/lavavu/LavaVu/workflows/Test/badge.svg)](https://github.com/lavavu/LavaVu/actions?query=workflow:Test)
 [![Deploy Status](https://github.com/lavavu/LavaVu/workflows/Deploy/badge.svg?branch=1.7.3)](https://github.com/lavavu/LavaVu/actions?query=workflow:Deploy)
 [![DOI](https://zenodo.org/badge/45163055.svg)](https://zenodo.org/badge/latestdoi/45163055)
-[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/lavavu/LavaVu/1.8.75)
+[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/lavavu/LavaVu/1.8.78)
 
 A scientific visualisation tool with a python interface for fast and flexible visual analysis.
 

{lavavu_osmesa-1.8.75.dist-info → lavavu_osmesa-1.8.78.dist-info}/RECORD

@@ -1,72 +1,72 @@
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{lavavu_osmesa-1.8.75.dist-info → lavavu_osmesa-1.8.78.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (70.3.0)
+Generator: setuptools (75.1.0)
 Root-Is-Purelib: false
 Tag: cp311-cp311-manylinux_2_28_x86_64