large-image-source-openslide 1.32.0a3__py3-none-any.whl → 1.32.1__py3-none-any.whl

large_image_source_openslide/__init__.py

@@ -20,6 +20,7 @@ import os
 from importlib.metadata import PackageNotFoundError
 from importlib.metadata import version as _importlib_version
 
+import numpy as np
 import openslide
 import PIL
 import tifftools
@@ -186,6 +187,12 @@ class OpenslideFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
                 self._svslevels = self._svslevels[prevlevels - self.levels:]
         except Exception:
             pass
+        try:
+            self._background = tuple(int(
+                self._openslide.properties['openslide.background-color']
+                [i * 2:i * 2 + 2], 16) for i in range(3))
+        except Exception:
+            self._background = None
         self._populatedLevels = len({l['svslevel'] for l in self._svslevels})
 
     def _getTileSize(self):
@@ -356,6 +363,10 @@ class OpenslideFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
                     retries -= 1
                     if retries <= 0:
                         raise TileSourceError(msg)
+            if tile.mode == 'RGBA' and self._background:
+                tile = np.array(tile)
+                tile[tile[:, :, -1] == 0, :3] = self._background
+                tile = PIL.Image.fromarray(tile, 'RGBA')
             # Always scale to the svs level 0 tile size.
             if svslevel['scale'] != 1:
                 tile = tile.resize((self.tileWidth, self.tileHeight),

{large_image_source_openslide-1.32.0a3.dist-info → large_image_source_openslide-1.32.1.dist-info}/METADATA

@@ -1,11 +1,11 @@
-Metadata-Version: 2.2
+Metadata-Version: 2.4
 Name: large-image-source-openslide
-Version: 1.32.0a3
+Version: 1.32.1
 Summary: An Openslide tilesource for large_image.
 Home-page: https://github.com/girder/large_image
 Author: Kitware, Inc.
 Author-email: kitware@kitware.com
-License: Apache Software License 2.0
+License: Apache-2.0
 Keywords: large_image,tile source
 Classifier: Development Status :: 5 - Production/Stable
 Classifier: License :: OSI Approved :: Apache Software License
@@ -19,7 +19,7 @@ Classifier: Programming Language :: Python :: 3.13
 Requires-Python: >=3.8
 Description-Content-Type: text/x-rst
 License-File: LICENSE
-Requires-Dist: large-image>=1.32.0a3
+Requires-Dist: large-image>=1.32.1
 Requires-Dist: openslide-python>=1.4.1
 Requires-Dist: openslide-bin; platform_system == "Linux" and platform_machine == "x86_64"
 Requires-Dist: openslide-bin; platform_system == "Linux" and platform_machine == "aarch64"
@@ -28,7 +28,7 @@ Requires-Dist: openslide-bin; platform_system == "Darwin" and platform_machine =
 Requires-Dist: openslide-bin; platform_system == "Darwin" and platform_machine == "x86_64"
 Requires-Dist: tifftools>=1.2.0
 Provides-Extra: girder
-Requires-Dist: girder-large-image>=1.32.0a3; extra == "girder"
+Requires-Dist: girder-large-image>=1.32.1; extra == "girder"
 Dynamic: author
 Dynamic: author-email
 Dynamic: classifier
@@ -37,6 +37,7 @@ Dynamic: description-content-type
 Dynamic: home-page
 Dynamic: keywords
 Dynamic: license
+Dynamic: license-file
 Dynamic: provides-extra
 Dynamic: requires-dist
 Dynamic: requires-python

large_image_source_openslide-1.32.1.dist-info/RECORD

@@ -0,0 +1,8 @@
+large_image_source_openslide/__init__.py,sha256=UVdsXIFt66wHuohQnIhhhP4QUW4-AxrEWPEgrTPoGU4,20979
+large_image_source_openslide/girder_source.py,sha256=ntLgOinO7xcO85wFbjx6XEBmTgEtx5cuPZ_K6wXZzqA,1199
+large_image_source_openslide-1.32.1.dist-info/licenses/LICENSE,sha256=psuoW8kuDP96RQsdhzwOqi6fyWv0ct8CR6Jr7He_P_k,10173
+large_image_source_openslide-1.32.1.dist-info/METADATA,sha256=vHeYOomoqX9EswjwzR_6SQfrczIi0OrlIRLoh8iHFDc,1845
+large_image_source_openslide-1.32.1.dist-info/WHEEL,sha256=CmyFI0kx5cdEMTLiONQRbGQwjIoR1aIYB7eCAQ4KPJ0,91
+large_image_source_openslide-1.32.1.dist-info/entry_points.txt,sha256=4Z5cf63yeesvHxiR9W1dY3rfz5_V4Ck2xYhPUp4A1qA,196
+large_image_source_openslide-1.32.1.dist-info/top_level.txt,sha256=wqaQQDWQl9a_l9s6n07tTxfjeEXePtHBhz1np6aUwQE,29
+large_image_source_openslide-1.32.1.dist-info/RECORD,,

{large_image_source_openslide-1.32.0a3.dist-info → large_image_source_openslide-1.32.1.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (75.8.0)
+Generator: setuptools (78.1.0)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

large_image_source_openslide-1.32.0a3.dist-info/RECORD

@@ -1,8 +0,0 @@
-large_image_source_openslide/__init__.py,sha256=O1-E-D7ZdY6Ta_ngId_HV0uqqxAbuY_J9fKTNVOFulE,20495
-large_image_source_openslide/girder_source.py,sha256=ntLgOinO7xcO85wFbjx6XEBmTgEtx5cuPZ_K6wXZzqA,1199
-large_image_source_openslide-1.32.0a3.dist-info/LICENSE,sha256=psuoW8kuDP96RQsdhzwOqi6fyWv0ct8CR6Jr7He_P_k,10173
-large_image_source_openslide-1.32.0a3.dist-info/METADATA,sha256=vjyLl4LBhkNQra44wtXtbBb43n0yTBZnXQogQKM2mww,1846
-large_image_source_openslide-1.32.0a3.dist-info/WHEEL,sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8,91
-large_image_source_openslide-1.32.0a3.dist-info/entry_points.txt,sha256=4Z5cf63yeesvHxiR9W1dY3rfz5_V4Ck2xYhPUp4A1qA,196
-large_image_source_openslide-1.32.0a3.dist-info/top_level.txt,sha256=wqaQQDWQl9a_l9s6n07tTxfjeEXePtHBhz1np6aUwQE,29
-large_image_source_openslide-1.32.0a3.dist-info/RECORD,,