large-image-source-openslide 1.27.3.dev26__py3-none-any.whl → 1.27.4__py3-none-any.whl

large_image_source_openslide/__init__.py

@@ -395,7 +395,15 @@ class OpenslideFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
                 self._openslide = openslide.OpenSlide(self._largeImagePath)
                 return None
         tiff_buffer = io.BytesIO()
-        tifftools.write_tiff(self._tiffinfo['ifds'][images[imageKey]], tiff_buffer)
+        ifd = self._tiffinfo['ifds'][images[imageKey]]
+        if (tifftools.Tag.Photometric.value in ifd['tags'] and
+                ifd['tags'][tifftools.Tag.Photometric.value]['data'][0] ==
+                tifftools.constants.Photometric.RGB and
+                tifftools.Tag.SamplesPerPixel.value in ifd['tags'] and
+                ifd['tags'][tifftools.Tag.SamplesPerPixel.value]['data'][0] == 1):
+            ifd['tags'][tifftools.Tag.Photometric.value]['data'][
+                0] = tifftools.constants.Photometric.MinIsBlack
+        tifftools.write_tiff(ifd, tiff_buffer)
         return PIL.Image.open(tiff_buffer)
 
 

{large_image_source_openslide-1.27.3.dev26.dist-info → large_image_source_openslide-1.27.4.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: large-image-source-openslide
-Version: 1.27.3.dev26
+Version: 1.27.4
 Summary: An Openslide tilesource for large_image.
 Home-page: https://github.com/girder/large_image
 Author: Kitware, Inc.
@@ -17,11 +17,11 @@ Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
 Requires-Python: >=3.8
 License-File: LICENSE
-Requires-Dist: large-image >=1.27.3.dev26
+Requires-Dist: large-image >=1.27.4
 Requires-Dist: openslide-python >=1.1.0
 Requires-Dist: tifftools >=1.2.0
 Provides-Extra: girder
-Requires-Dist: girder-large-image >=1.27.3.dev26 ; extra == 'girder'
+Requires-Dist: girder-large-image >=1.27.4 ; extra == 'girder'
 
 An Openslide tilesource for large_image.
 

large_image_source_openslide-1.27.4.dist-info/RECORD

@@ -0,0 +1,8 @@
+large_image_source_openslide/__init__.py,sha256=vzEx04RTBTptXUwbEMtcMMqXC2zq8lVtbenxFcdSfI8,18468
+large_image_source_openslide/girder_source.py,sha256=ntLgOinO7xcO85wFbjx6XEBmTgEtx5cuPZ_K6wXZzqA,1199
+large_image_source_openslide-1.27.4.dist-info/LICENSE,sha256=psuoW8kuDP96RQsdhzwOqi6fyWv0ct8CR6Jr7He_P_k,10173
+large_image_source_openslide-1.27.4.dist-info/METADATA,sha256=09a0wc0pTUvOSONWwXUPDHO5sCHuDO_4sEPXcwuPPI4,1048
+large_image_source_openslide-1.27.4.dist-info/WHEEL,sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM,92
+large_image_source_openslide-1.27.4.dist-info/entry_points.txt,sha256=4Z5cf63yeesvHxiR9W1dY3rfz5_V4Ck2xYhPUp4A1qA,196
+large_image_source_openslide-1.27.4.dist-info/top_level.txt,sha256=wqaQQDWQl9a_l9s6n07tTxfjeEXePtHBhz1np6aUwQE,29
+large_image_source_openslide-1.27.4.dist-info/RECORD,,

large_image_source_openslide-1.27.3.dev26.dist-info/RECORD

@@ -1,8 +0,0 @@
-large_image_source_openslide/__init__.py,sha256=STCoMhl5ph9UTsnxWZ-jUuH2NlxwpXTanSx37bRcrKc,17972
-large_image_source_openslide/girder_source.py,sha256=ntLgOinO7xcO85wFbjx6XEBmTgEtx5cuPZ_K6wXZzqA,1199
-large_image_source_openslide-1.27.3.dev26.dist-info/LICENSE,sha256=psuoW8kuDP96RQsdhzwOqi6fyWv0ct8CR6Jr7He_P_k,10173
-large_image_source_openslide-1.27.3.dev26.dist-info/METADATA,sha256=peF_VvkoNlXXFld79Hh2xaFYnAuECIvpqrT7pEYnaaM,1066
-large_image_source_openslide-1.27.3.dev26.dist-info/WHEEL,sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM,92
-large_image_source_openslide-1.27.3.dev26.dist-info/entry_points.txt,sha256=4Z5cf63yeesvHxiR9W1dY3rfz5_V4Ck2xYhPUp4A1qA,196
-large_image_source_openslide-1.27.3.dev26.dist-info/top_level.txt,sha256=wqaQQDWQl9a_l9s6n07tTxfjeEXePtHBhz1np6aUwQE,29
-large_image_source_openslide-1.27.3.dev26.dist-info/RECORD,,