lamindb 1.5.2__py3-none-any.whl → 1.6.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (66) hide show
  1. lamindb/__init__.py +25 -6
  2. lamindb/_finish.py +5 -5
  3. lamindb/_tracked.py +1 -1
  4. lamindb/_view.py +4 -4
  5. lamindb/core/_context.py +32 -6
  6. lamindb/core/_settings.py +1 -1
  7. lamindb/core/datasets/mini_immuno.py +8 -0
  8. lamindb/core/loaders.py +1 -1
  9. lamindb/core/storage/_anndata_accessor.py +9 -9
  10. lamindb/core/storage/_valid_suffixes.py +1 -0
  11. lamindb/core/storage/_zarr.py +32 -107
  12. lamindb/curators/__init__.py +19 -2
  13. lamindb/curators/_cellxgene_schemas/__init__.py +3 -3
  14. lamindb/curators/_legacy.py +15 -19
  15. lamindb/curators/core.py +247 -80
  16. lamindb/errors.py +2 -2
  17. lamindb/migrations/0069_squashed.py +8 -8
  18. lamindb/migrations/0071_lamindbv1_migrate_schema.py +3 -3
  19. lamindb/migrations/0073_merge_ourprojects.py +7 -7
  20. lamindb/migrations/0075_lamindbv1_part5.py +1 -1
  21. lamindb/migrations/0077_lamindbv1_part6b.py +3 -3
  22. lamindb/migrations/0080_polish_lamindbv1.py +2 -2
  23. lamindb/migrations/0088_schema_components.py +1 -1
  24. lamindb/migrations/0090_runproject_project_runs.py +2 -2
  25. lamindb/migrations/0091_alter_featurevalue_options_alter_space_options_and_more.py +1 -1
  26. lamindb/migrations/0094_writeloglock_writelogmigrationstate_and_more.py +84 -0
  27. lamindb/migrations/0095_remove_rundata_flextable.py +155 -0
  28. lamindb/migrations/0096_remove_artifact__param_values_and_more.py +266 -0
  29. lamindb/migrations/0097_remove_schemaparam_param_remove_paramvalue_param_and_more.py +27 -0
  30. lamindb/migrations/0098_alter_feature_type_alter_project_type_and_more.py +656 -0
  31. lamindb/migrations/0099_alter_writelog_seqno.py +22 -0
  32. lamindb/migrations/0100_branch_alter_artifact__branch_code_and_more.py +102 -0
  33. lamindb/migrations/0101_alter_artifact_hash_alter_feature_name_and_more.py +444 -0
  34. lamindb/migrations/0102_remove_writelog_branch_code_and_more.py +72 -0
  35. lamindb/migrations/0103_remove_writelog_migration_state_and_more.py +46 -0
  36. lamindb/migrations/{0090_squashed.py → 0103_squashed.py} +1013 -1009
  37. lamindb/models/__init__.py +35 -18
  38. lamindb/models/_describe.py +4 -4
  39. lamindb/models/_django.py +38 -4
  40. lamindb/models/_feature_manager.py +66 -123
  41. lamindb/models/_from_values.py +13 -13
  42. lamindb/models/_label_manager.py +8 -6
  43. lamindb/models/_relations.py +7 -7
  44. lamindb/models/artifact.py +166 -156
  45. lamindb/models/can_curate.py +25 -25
  46. lamindb/models/collection.py +48 -18
  47. lamindb/models/core.py +3 -3
  48. lamindb/models/feature.py +88 -60
  49. lamindb/models/has_parents.py +17 -17
  50. lamindb/models/project.py +52 -24
  51. lamindb/models/query_manager.py +5 -5
  52. lamindb/models/query_set.py +61 -37
  53. lamindb/models/record.py +158 -1583
  54. lamindb/models/run.py +39 -176
  55. lamindb/models/save.py +6 -6
  56. lamindb/models/schema.py +33 -44
  57. lamindb/models/sqlrecord.py +1743 -0
  58. lamindb/models/transform.py +17 -33
  59. lamindb/models/ulabel.py +21 -15
  60. {lamindb-1.5.2.dist-info → lamindb-1.6.0.dist-info}/METADATA +7 -11
  61. lamindb-1.6.0.dist-info/RECORD +118 -0
  62. lamindb/core/storage/_anndata_sizes.py +0 -41
  63. lamindb/models/flextable.py +0 -163
  64. lamindb-1.5.2.dist-info/RECORD +0 -109
  65. {lamindb-1.5.2.dist-info → lamindb-1.6.0.dist-info}/LICENSE +0 -0
  66. {lamindb-1.5.2.dist-info → lamindb-1.6.0.dist-info}/WHEEL +0 -0
@@ -1,109 +0,0 @@
1
- lamindb/__init__.py,sha256=yrNn0pSKCbdmvx_KKQ98PZraCdjzqMPwcwlHR3IoDvg,2676
2
- lamindb/_finish.py,sha256=Wqb846pCErsx5ZPulAfdF5PJbWzgAdfbuYuf4FndfhY,20124
3
- lamindb/_tracked.py,sha256=fse_H0ehc9WvU_l1572g7qya0sRdWCh22LZkq0XU4ic,4445
4
- lamindb/_view.py,sha256=kSmG8X4ULQZEKxY7ESnthQqsUf1DEzoYGeTLYRU1I7s,4938
5
- lamindb/errors.py,sha256=gVt7E5LRjc4OezrkIiRRTXUDIw_unQaKf2300OPxBxg,2003
6
- lamindb/base/__init__.py,sha256=6-iUeiBHuxC8vxP3vG880CH1nqP_7z34Appzzr63FBA,295
7
- lamindb/base/fields.py,sha256=5l8ke5sAJ5_JvWqjKEMW8oyriGKA7itqGjbmoKKrJrM,8102
8
- lamindb/base/ids.py,sha256=X-1N129FOoNw4TPlK_EzgTZOzRidiMyPWszz9r_066g,34
9
- lamindb/base/types.py,sha256=HVtZbUqo1nfimep9JyiP-O-pQjyMge1_PcCM9v9je10,2777
10
- lamindb/base/uids.py,sha256=cLBi5mIlsf1ltkTb17r1FLzlOjlGmjvsCygoVJHQ-A8,2116
11
- lamindb/base/users.py,sha256=8MSmAvCKoUF15YsDE6BGLBXsFWpfoEEg8iDTKZ7kD48,848
12
- lamindb/core/__init__.py,sha256=aaBq0UVjNolMynbT1V5hB6UrJm1tK0M6WHu_r6em9_4,604
13
- lamindb/core/_compat.py,sha256=NLnKk1qk4xdgMV-QwFDnBnbio02ujjlF86icvhpdv4c,2029
14
- lamindb/core/_context.py,sha256=xKj4YGpgM3Dx8H7_rNf6EI3sC5JHScSYVgHw-QYbMp4,34679
15
- lamindb/core/_mapped_collection.py,sha256=dxyZ1ZHFn5SBl1xILqN9N6TTUJP0PptVBV-2O0EdZww,25751
16
- lamindb/core/_settings.py,sha256=DAeEN2Qswj6VDlM7OE5YtoteMfFZ61CmMwcS056_scE,6211
17
- lamindb/core/_sync_git.py,sha256=Z7keuyS5X7CAj285sEbZIFExZF9mtjGH8DzKwz3xhHw,5881
18
- lamindb/core/_track_environment.py,sha256=gKmXiL2meqJT65X-66p_GlonoxzBZXNwNm-G9gk0fS4,847
19
- lamindb/core/exceptions.py,sha256=FMEoSvT3FvtLkxQAt2oDXPeaPem8V5x5UBbTsPFYU5w,53
20
- lamindb/core/loaders.py,sha256=CFXQILMJTEF7IBwgP-ihuyBs0cV8rCoJmqIpzwD8OMA,5460
21
- lamindb/core/types.py,sha256=yHr2Vn_p1Hepz_mBooXmsKudqu8Tco7lXZmVS_ORQIw,383
22
- lamindb/core/datasets/__init__.py,sha256=x5zn_vn8D4xMJOJ9hVc8wRwQk5ea81Un2tGHb2UfiHg,1893
23
- lamindb/core/datasets/_core.py,sha256=uaP0snoKuAE5nDTL_XIgPeEoXSp5sTrNNAyOPDciZRU,20286
24
- lamindb/core/datasets/_fake.py,sha256=BZF9R_1iF0HDnvtZNqL2FtsjSMuqDIfuFxnw_LJYIh4,953
25
- lamindb/core/datasets/_small.py,sha256=HBzyTporAl-6Cr4DbDDEtzbU2ILKNxxiRM-GeZofqsw,2290
26
- lamindb/core/datasets/mini_immuno.py,sha256=4d7TRNsq8GPIeLc-RlDcUMCfTdlPmrkCXW_0R749qyg,5428
27
- lamindb/core/storage/__init__.py,sha256=JOIMu_7unbyhndtH1j0Q-9AvY8knSuc1IJO9sQnyBAQ,498
28
- lamindb/core/storage/_anndata_accessor.py,sha256=oq2e4vlBnGhIeGR5a_8traOV3tKklZJUqcgKt0pEO8c,26187
29
- lamindb/core/storage/_anndata_sizes.py,sha256=aXO3OB--tF5MChenSsigW6Q-RuE8YJJOUTVukkLrv9A,1029
30
- lamindb/core/storage/_backed_access.py,sha256=LlpRDZ0skseZA5tBFu3-cH1wJwuXm7-NS2RgnTK7wgc,7382
31
- lamindb/core/storage/_polars_lazy_df.py,sha256=Z0KMp0OU5S36L5g8EuJk7V_nn-spgG1lFeEFnkTOLcw,1350
32
- lamindb/core/storage/_pyarrow_dataset.py,sha256=lRYYt7edUtwauhxd7RwFud6YPDbz2PFvYYgqLhfapfk,1398
33
- lamindb/core/storage/_tiledbsoma.py,sha256=QLMOPjdxv9JFs9JR0Kqg1UTkJKNgwIDMeHAewB0-Lqg,11124
34
- lamindb/core/storage/_valid_suffixes.py,sha256=vUSeQ4s01rdhD_vSd6wKmFBsgMJAKkBMnL_T9Y1znMg,501
35
- lamindb/core/storage/_zarr.py,sha256=cisYXU4_QXMF_ZY2pV52Incus6365mMxRphLaHO76W0,6801
36
- lamindb/core/storage/objects.py,sha256=n1Kj1soxF-_iLFyNnHriVFcngw6nqEAd7aVm0Hm8Tcw,3017
37
- lamindb/core/storage/paths.py,sha256=wJTD7qza87Xx7ZMo9HFHKgZWaVnst6qc4F2SzqvBMrE,7118
38
- lamindb/core/subsettings/__init__.py,sha256=f_vOqZOjVGez8pLmtrUuc_ayDGXl07t_ZY-P2Cedxbo,201
39
- lamindb/core/subsettings/_annotation_settings.py,sha256=o-yTYw-NmjFmtehbKU8qnf7tyaeDFkTRGan1pXAIVT0,370
40
- lamindb/core/subsettings/_creation_settings.py,sha256=NGHWKqCFSzVNBxAr2VnmdYguiFdW29XUK7T9wRsVshg,906
41
- lamindb/curators/__init__.py,sha256=ZexikeaVunT24TqsR1NsSOCSBXDBigfGtFT55tBwqS8,371
42
- lamindb/curators/_legacy.py,sha256=dTim3YFvdYyMsn6y8qSYkbCnnEI4tlaevN2-OO_qEx8,76174
43
- lamindb/curators/core.py,sha256=YwMcKV2rAEhTav_fBixMM_sON2iUeu8JHGgxgcTjBn4,59915
44
- lamindb/curators/_cellxgene_schemas/__init__.py,sha256=zqlFzMNMDGEBe6DV0gBsBMpfc9UHvNv1EpBsz_ktMoA,7502
45
- lamindb/curators/_cellxgene_schemas/schema_versions.csv,sha256=X9rmO88TW1Fht1f5mJs0JdW-VPvyKSajpf8lHNeECj4,1680
46
- lamindb/examples/__init__.py,sha256=DGImiuWYDvwxh78p5FCwQWClEwsE3ODLU49i_NqbW0c,533
47
- lamindb/examples/schemas/__init__.py,sha256=NPDp7VjMOHStEIthx3xW9NSHtY7jnnMzrNPcSDgxT3M,241
48
- lamindb/examples/schemas/_anndata.py,sha256=Q0h7YWZ6lqAZtE0i1xxCvJ8JfSa_RhFj4RY1sE_9HZs,764
49
- lamindb/examples/schemas/_simple.py,sha256=JdavLLrJnxDLTKBKRk2Tb534AInlzX0jyEvU9LcH-NQ,568
50
- lamindb/integrations/__init__.py,sha256=RWGMYYIzr8zvmNPyVB4m-p4gMDhxdRbjES2Ed23OItw,215
51
- lamindb/integrations/_vitessce.py,sha256=OvtnBAxlR_PvfeGjpySjzi2uRYsBwDwb3tMyhBzNVFk,4110
52
- lamindb/migrations/0069_squashed.py,sha256=gMWv65ErtjJZyWWo1b4uFHXWa6MSuBcmqz4ElZ6GPf4,62639
53
- lamindb/migrations/0070_lamindbv1_migrate_data.py,sha256=tyq_xi6U8TXi9C2Raf6v_UTtfyfqQOUIFJzYj4oCgAE,2429
54
- lamindb/migrations/0071_lamindbv1_migrate_schema.py,sha256=r3PPpq4RK7rhrLWjhVACd5i-tSUTBF0X6Luc5v-g0Lg,25125
55
- lamindb/migrations/0072_remove_user__branch_code_remove_user_aux_and_more.py,sha256=Nek9Mkuop3LgjAuW3moY-dyPXroCFq8UyvCAAWEquCM,4443
56
- lamindb/migrations/0073_merge_ourprojects.py,sha256=f0uZ63X0iEylKDlYWD6CAYMge5RcwPSH6yGsoA1KgPQ,35032
57
- lamindb/migrations/0074_lamindbv1_part4.py,sha256=NqYjEAmm2bNuK42ufLaJZDBjCjAJNv-N9pEXK7iCfyA,11557
58
- lamindb/migrations/0075_lamindbv1_part5.py,sha256=-3pqXz7e-NbWGTqMhOStcx8zU6HjS-8dlqdyxqexWao,8960
59
- lamindb/migrations/0076_lamindbv1_part6.py,sha256=G_Wgog-OgquE0-h_CykjiDWUyPdYlCwA8gXjeuBY2OM,21349
60
- lamindb/migrations/0077_lamindbv1_part6b.py,sha256=v7k8OZX9o5ppSJU_yhHlIXGTobTm30bo1dAIi8tUkEI,8211
61
- lamindb/migrations/0078_lamindbv1_part6c.py,sha256=RWRXBwyyQ_rFTN5kwstBziV6tqHJcGYI2vsFmuYCCz0,17084
62
- lamindb/migrations/0079_alter_rundata_value_json_and_more.py,sha256=yQmbs8yWrFLOVQJqAfzLNMZOqTSnXyG-mQgpO7ls1u8,995
63
- lamindb/migrations/0080_polish_lamindbv1.py,sha256=VfCwJtHlBsMPIyFQ2oh24oWkiRXjDvXRpKe5fBZ63aM,17660
64
- lamindb/migrations/0081_revert_textfield_collection.py,sha256=uHuJ0W4Ips7BrnQnQBGPMn2eFQz29a1QAdHzN7XlDxo,490
65
- lamindb/migrations/0082_alter_feature_dtype.py,sha256=qAmZL2g0x43Jk4nbwE-c5z_29Q6vzvrL8DYJE16ZTVo,508
66
- lamindb/migrations/0083_alter_feature_is_type_alter_flextable_is_type_and_more.py,sha256=ANFJmrd7rtpDvk0OP0EwAhkB-K4GJobdOaEWmjrQqhM,2725
67
- lamindb/migrations/0084_alter_schemafeature_feature_and_more.py,sha256=ATL1Tyfvtvs0ZUH3JwWfBhcRsOGepCoMEjp9yZmO7z0,1012
68
- lamindb/migrations/0085_alter_feature_is_type_alter_flextable_is_type_and_more.py,sha256=09KGDirJWH1wkmYBREaF_UrkDGS9qwGxOQuleKydDbI,1941
69
- lamindb/migrations/0086_various.py,sha256=6-_vkiBEiv0ZVp-JCMVdea-AaKRU61DHyMWprU_VUrg,2824
70
- lamindb/migrations/0087_rename__schemas_m2m_artifact_feature_sets_and_more.py,sha256=zRlBS89VhmECwGA_y9LghKibxJjtEAmHsEavKdj1ces,1132
71
- lamindb/migrations/0088_schema_components.py,sha256=9EeoEXX2mf8RtGv_eqOH9zpI2Dg7jhOT9Kxe-9vCiTQ,9230
72
- lamindb/migrations/0089_subsequent_runs.py,sha256=ETXBqn-MwhFi3GIUbUqwM2j9un2o-0CI2Ux8b8FXuuw,5859
73
- lamindb/migrations/0090_runproject_project_runs.py,sha256=Ab9wyGxc6xjBfj-36cqdTlRLj2vgQM3QC9o-mvF0MD8,2449
74
- lamindb/migrations/0090_squashed.py,sha256=kx_A_25BYantikxCbGhJughFpv_lqyHH86pMh5YevEE,160823
75
- lamindb/migrations/0091_alter_featurevalue_options_alter_space_options_and_more.py,sha256=Df4EYAQlLKZ4BpFcsRRF52pGN3hDSo94laiO-V90Kn4,607
76
- lamindb/migrations/0092_alter_artifactfeaturevalue_artifact_and_more.py,sha256=x-2Pvi0GJugkLrR--Fw9PBzV-HxqXjl0NktxRtRFJno,2459
77
- lamindb/migrations/0093_alter_schemacomponent_unique_together.py,sha256=p6pCGU3xzOo5FuHE_COxVn6qLgRUAdfWXJjl4_euEKU,424
78
- lamindb/migrations/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
79
- lamindb/models/__init__.py,sha256=IFYoZfly3m0Me5Fr8sk6-KdYpVzkuug0lo8jvci00Kg,2080
80
- lamindb/models/_describe.py,sha256=4PxaavWidEL8cyV2idbpC_7Zo0Jmjam3X1Bwe71IMaY,5489
81
- lamindb/models/_django.py,sha256=2LFaTvIPtxIV8_T6Kx0cvquTetj7C3OcnKukUyC9msY,7705
82
- lamindb/models/_feature_manager.py,sha256=uMIcQMYrH1bHCqzovDbkDUOsBre_-mrg_7OS4RdoR8c,54666
83
- lamindb/models/_from_values.py,sha256=-8l3_d2Nm14kzi1FjEYvBwyuucL-ZcDSjlMufIb4XoQ,13324
84
- lamindb/models/_is_versioned.py,sha256=Th2_cBf9UWh27E6ANxg6LGmjBOumXFy7AjH0GG4FoXA,7601
85
- lamindb/models/_label_manager.py,sha256=QOT6mz_rzPJ5p7hM1l-XzDWzyWUERpmAan2n_ma5wpI,12112
86
- lamindb/models/_relations.py,sha256=ONjHPiWIa_Ur7zMNTa_9Uw7K-366GORyPvGoVjf4EQs,3681
87
- lamindb/models/artifact.py,sha256=6F_jcZiG1LeLT5HKSPCBiKUU-ItFM24aHyqWrwl1egc,110565
88
- lamindb/models/artifact_set.py,sha256=VOZEGDo3m_9Yg_ftx3I2fwdydjHN61X_qV18N6xG4kM,4117
89
- lamindb/models/can_curate.py,sha256=5dXHCRoJzLg2y9YDhpH7CyWexxliFHilwJ_UPjjZwRI,29188
90
- lamindb/models/collection.py,sha256=TNXnrR86ZgsSfEvaOuAEItgZ947klTXXZspa7hpyVmw,27288
91
- lamindb/models/core.py,sha256=A-W_Hdg4AmbBFBU38SEEVhOwSIzww5oNgYAQFnwOO7A,4018
92
- lamindb/models/feature.py,sha256=WoT29eZ8DR6MTZgnztbRye3-zX4BRYfJ8HlhdenX2qA,28186
93
- lamindb/models/flextable.py,sha256=ET9j0fTFYQIdXOZfwCnosXOag7nYD1DUV6_wZNqhvOs,5400
94
- lamindb/models/has_parents.py,sha256=A8OWsNotWlFrZB2pURRxp8EcHJ1kIlyV5eMnajGgkh4,20328
95
- lamindb/models/project.py,sha256=Hm-5hLn-FffFK3J_68gt-AxVc6bo26fegwGFRw0Gp50,15225
96
- lamindb/models/query_manager.py,sha256=mqsULCmUQf5ibpSXazca9ZYxyZwiDLuzSm8s6dPrl_M,10712
97
- lamindb/models/query_set.py,sha256=xKh5QjAlHunktB1S4x9f42Fg0SP_-sK7XlyxStIRDSo,30385
98
- lamindb/models/record.py,sha256=fomXuOcqkfiYF3zEdiUkYw9x00qP5flM7oseUUomhIo,61354
99
- lamindb/models/run.py,sha256=FzqVQhYj4DXqlnmHvNIziOCAlx9K0wISXBLpom1Yb74,20688
100
- lamindb/models/save.py,sha256=JTAaorKECx0ZeHaX0H9Yt4MDwOsT9F813WbSJkBIPaU,13339
101
- lamindb/models/schema.py,sha256=5_31iIPh19eJn0rm1OTeFk0gtD0YUPrTbiPsglKWOeo,47753
102
- lamindb/models/transform.py,sha256=LGnTR7g_rAx3YFAFv4l4_UzabruKQlnui1Y3tlWHwXk,12731
103
- lamindb/models/ulabel.py,sha256=yn9ttz28MqDBh6ZgwH7cty6GHCJOzLJn2IEpspYosDo,8793
104
- lamindb/setup/__init__.py,sha256=OwZpZzPDv5lPPGXZP7-zK6UdO4FHvvuBh439yZvIp3A,410
105
- lamindb/setup/core/__init__.py,sha256=SevlVrc2AZWL3uALbE5sopxBnIZPWZ1IB0NBDudiAL8,167
106
- lamindb-1.5.2.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
107
- lamindb-1.5.2.dist-info/WHEEL,sha256=CpUCUxeHQbRN5UGRQHYRJorO5Af-Qy_fHMctcQ8DSGI,82
108
- lamindb-1.5.2.dist-info/METADATA,sha256=d13GwaEiF6_3iCOJIBVB3XVQJTt5wQhptuk77Te4JZM,2782
109
- lamindb-1.5.2.dist-info/RECORD,,