PyPI - lamindb - Versions diffs - 1.11.3__py3-none-any.whl → 1.12.1__py3-none-any.whl - Mend

lamindb 1.11.3py3-none-any.whl → 1.12.1py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (54) hide show

lamindb/__init__.py +8 -14
lamindb/_tracked.py +2 -0
lamindb/base/types.py +1 -3
lamindb/core/_context.py +16 -31
lamindb/core/_mapped_collection.py +2 -2
lamindb/core/storage/paths.py +5 -3
lamindb/curators/core.py +15 -4
lamindb/examples/__init__.py +3 -1
lamindb/examples/croissant/__init__.py +3 -1
lamindb/examples/mlflow/__init__.py +38 -0
lamindb/examples/wandb/__init__.py +40 -0
lamindb/integrations/__init__.py +26 -0
lamindb/integrations/_lightning.py +87 -0
lamindb/migrations/0120_add_record_fk_constraint.py +1 -1
lamindb/migrations/0122_remove_personproject_person_and_more.py +219 -0
lamindb/migrations/0123_alter_artifact_description_alter_branch_description_and_more.py +82 -0
lamindb/migrations/0124_page_artifact_page_collection_page_feature_page_and_more.py +15 -0
lamindb/migrations/0125_artifact_is_locked_collection_is_locked_and_more.py +79 -0
lamindb/migrations/0126_alter_artifact_is_locked_alter_collection_is_locked_and_more.py +105 -0
lamindb/migrations/0127_alter_run_status_code_feature_dtype.py +31 -0
lamindb/migrations/0128_artifact__real_key.py +21 -0
lamindb/migrations/0129_remove_feature_page_remove_project_page_and_more.py +779 -0
lamindb/migrations/0130_branch_space_alter_artifactblock_artifact_and_more.py +170 -0
lamindb/migrations/0131_record_unique_name_type_space.py +18 -0
lamindb/migrations/0132_record_parents_record_reference_and_more.py +61 -0
lamindb/migrations/0133_artifactuser_artifact_users.py +108 -0
lamindb/migrations/{0119_squashed.py → 0133_squashed.py} +1211 -322
lamindb/models/__init__.py +14 -4
lamindb/models/_django.py +1 -2
lamindb/models/_feature_manager.py +1 -0
lamindb/models/_is_versioned.py +14 -16
lamindb/models/_relations.py +7 -0
lamindb/models/artifact.py +99 -56
lamindb/models/artifact_set.py +20 -3
lamindb/models/block.py +174 -0
lamindb/models/can_curate.py +7 -9
lamindb/models/collection.py +9 -9
lamindb/models/feature.py +38 -38
lamindb/models/has_parents.py +15 -6
lamindb/models/project.py +44 -99
lamindb/models/query_manager.py +1 -1
lamindb/models/query_set.py +36 -8
lamindb/models/record.py +169 -46
lamindb/models/run.py +44 -10
lamindb/models/save.py +7 -7
lamindb/models/schema.py +9 -2
lamindb/models/sqlrecord.py +87 -35
lamindb/models/storage.py +13 -3
lamindb/models/transform.py +7 -2
lamindb/models/ulabel.py +6 -23
{lamindb-1.11.3.dist-info → lamindb-1.12.1.dist-info}/METADATA +18 -21
{lamindb-1.11.3.dist-info → lamindb-1.12.1.dist-info}/RECORD +54 -38
{lamindb-1.11.3.dist-info → lamindb-1.12.1.dist-info}/LICENSE +0 -0
{lamindb-1.11.3.dist-info → lamindb-1.12.1.dist-info}/WHEEL +0 -0

lamindb/migrations/0122_remove_personproject_person_and_more.py ADDED Viewed

@@ -0,0 +1,219 @@
+# Generated by Django 5.1.12 on 2025-09-28 20:30
+import django.db.models.deletion
+import django.db.models.functions.datetime
+from django.db import migrations, models
+import lamindb.base.fields
+import lamindb.base.users
+import lamindb.models.run
+import lamindb.models.sqlrecord
+def migrate_person_to_record(apps, schema_editor):
+    """Migrate Person to Record."""
+    Person = apps.get_model("lamindb", "Person")
+    if not Person.objects.exists():
+        return  # No Person records to migrate
+    with schema_editor.connection.cursor() as cursor:
+        cursor.execute("""
+            INSERT INTO lamindb_record (
+                uid, name, created_at, updated_at, created_by_id, run_id, is_type
+            )
+            SELECT
+                CONCAT(uid, uid) as uid,
+                name,
+                created_at,
+                updated_at,
+                created_by_id,
+                run_id,
+                False
+            FROM lamindb_person
+        """)
+        migrated_count = cursor.rowcount
+        print(f"\nMigrated {migrated_count} Person records to Record table")
+    with schema_editor.connection.cursor() as cursor:
+        cursor.execute("""
+            INSERT INTO lamindb_referencerecord (
+                created_at, created_by_id, feature_id, record_id, reference_id, run_id
+            )
+            SELECT
+                NOW() as created_at,
+                r.created_by_id,
+                NULL as feature_id,
+                rec.id as record_id,
+                ra.reference_id,
+                rec.run_id
+            FROM lamindb_reference_authors ra
+            JOIN lamindb_reference r ON ra.reference_id = r.id
+            JOIN lamindb_person p ON ra.person_id = p.id
+            JOIN lamindb_record rec ON rec.name = p.name
+        """)
+        created_count = cursor.rowcount
+        print(f"\nCreated {created_count} ReferenceRecord links for migrated authors")
+class Migration(migrations.Migration):
+    dependencies = [
+        ("lamindb", "0121_recorduser"),
+    ]
+    operations = [
+        migrations.CreateModel(
+            name="ReferenceRecord",
+            fields=[
+                (
+                    "created_at",
+                    lamindb.base.fields.DateTimeField(
+                        blank=True,
+                        db_default=django.db.models.functions.datetime.Now(),
+                        db_index=True,
+                        editable=False,
+                    ),
+                ),
+                ("id", models.BigAutoField(primary_key=True, serialize=False)),
+                (
+                    "created_by",
+                    lamindb.base.fields.ForeignKey(
+                        blank=True,
+                        default=lamindb.base.users.current_user_id,
+                        editable=False,
+                        on_delete=django.db.models.deletion.PROTECT,
+                        related_name="+",
+                        to="lamindb.user",
+                    ),
+                ),
+                (
+                    "feature",
+                    lamindb.base.fields.ForeignKey(
+                        blank=True,
+                        default=None,
+                        null=True,
+                        on_delete=django.db.models.deletion.PROTECT,
+                        related_name="links_referencerecord",
+                        to="lamindb.feature",
+                    ),
+                ),
+                (
+                    "record",
+                    lamindb.base.fields.ForeignKey(
+                        blank=True,
+                        on_delete=django.db.models.deletion.CASCADE,
+                        related_name="links_reference",
+                        to="lamindb.record",
+                    ),
+                ),
+                (
+                    "reference",
+                    lamindb.base.fields.ForeignKey(
+                        blank=True,
+                        on_delete=django.db.models.deletion.PROTECT,
+                        related_name="links_record",
+                        to="lamindb.reference",
+                    ),
+                ),
+                (
+                    "run",
+                    lamindb.base.fields.ForeignKey(
+                        blank=True,
+                        default=lamindb.models.run.current_run,
+                        null=True,
+                        on_delete=django.db.models.deletion.PROTECT,
+                        related_name="+",
+                        to="lamindb.run",
+                    ),
+                ),
+            ],
+            options={
+                "unique_together": {("reference", "feature", "record")},
+            },
+            bases=(lamindb.models.sqlrecord.IsLink, models.Model),
+        ),
+        migrations.AddField(
+            model_name="reference",
+            name="records",
+            field=models.ManyToManyField(
+                related_name="references",
+                through="lamindb.ReferenceRecord",
+                to="lamindb.record",
+            ),
+        ),
+        migrations.RunPython(migrate_person_to_record),
+        migrations.RemoveField(
+            model_name="project",
+            name="people",
+        ),
+        migrations.RemoveField(
+            model_name="reference",
+            name="authors",
+        ),
+        migrations.AlterUniqueTogether(
+            name="personproject",
+            unique_together=None,
+        ),
+        migrations.AlterUniqueTogether(
+            name="recordperson",
+            unique_together=None,
+        ),
+        migrations.RenameField(
+            model_name="reference",
+            old_name="records",
+            new_name="linked_in_records",
+        ),
+        migrations.AddField(
+            model_name="project",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="reference",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.DeleteModel(
+            name="Person",
+        ),
+        migrations.DeleteModel(
+            name="PersonProject",
+        ),
+        migrations.DeleteModel(
+            name="RecordPerson",
+        ),
+        migrations.AlterField(
+            model_name="recordreference",
+            name="value",
+            field=lamindb.base.fields.ForeignKey(
+                blank=True,
+                on_delete=django.db.models.deletion.PROTECT,
+                related_name="links_in_record",
+                to="lamindb.reference",
+            ),
+        ),
+        migrations.AlterUniqueTogether(
+            name="projectrecord",
+            unique_together={("project", "feature", "record")},
+        ),
+        migrations.AddField(
+            model_name="reference",
+            name="records",
+            field=models.ManyToManyField(
+                related_name="references",
+                through="lamindb.ReferenceRecord",
+                to="lamindb.record",
+            ),
+        ),
+        migrations.AlterField(
+            model_name="reference",
+            name="linked_in_records",
+            field=models.ManyToManyField(
+                related_name="linked_references",
+                through="lamindb.RecordReference",
+                to="lamindb.record",
+            ),
+        ),
+    ]

lamindb/migrations/0123_alter_artifact_description_alter_branch_description_and_more.py ADDED Viewed

@@ -0,0 +1,82 @@
+# Generated by Django 5.1.12 on 2025-09-28 21:39
+from django.db import migrations
+import lamindb.base.fields
+class Migration(migrations.Migration):
+    dependencies = [
+        ("lamindb", "0122_remove_personproject_person_and_more"),
+    ]
+    operations = [
+        migrations.AlterField(
+            model_name="artifact",
+            name="description",
+            field=lamindb.base.fields.TextField(
+                blank=True, db_index=True, default=None, null=True
+            ),
+        ),
+        migrations.AlterField(
+            model_name="branch",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="collection",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="feature",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="record",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="schema",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="space",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="storage",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="transform",
+            name="description",
+            field=lamindb.base.fields.TextField(
+                blank=True, db_index=True, default=None, null=True
+            ),
+        ),
+        migrations.AlterField(
+            model_name="ulabel",
+            name="description",
+            field=lamindb.base.fields.TextField(blank=True, default=None, null=True),
+        ),
+        migrations.AlterField(
+            model_name="artifact",
+            name="key",
+            field=lamindb.base.fields.CharField(
+                blank=True, db_index=True, default=None, max_length=1024, null=True
+            ),
+        ),
+        migrations.AlterField(
+            model_name="transform",
+            name="key",
+            field=lamindb.base.fields.CharField(
+                blank=True, db_index=True, default=None, max_length=1024, null=True
+            ),
+        ),
+    ]

lamindb/migrations/0124_page_artifact_page_collection_page_feature_page_and_more.py ADDED Viewed

@@ -0,0 +1,15 @@
+# Generated by Django 5.1.12 on 2025-09-28 23:37
+from django.db import migrations
+class Migration(migrations.Migration):
+    dependencies = [
+        (
+            "lamindb",
+            "0123_alter_artifact_description_alter_branch_description_and_more",
+        ),
+    ]
+    # this migration was later reverted, so we do not need to run it
+    operations = []  # type: ignore

lamindb/migrations/0125_artifact_is_locked_collection_is_locked_and_more.py ADDED Viewed

@@ -0,0 +1,79 @@
+# Generated by Django 5.1.12 on 2025-09-29 00:46
+from django.db import migrations
+import lamindb.base.fields
+class Migration(migrations.Migration):
+    dependencies = [
+        ("lamindb", "0124_page_artifact_page_collection_page_feature_page_and_more"),
+    ]
+    operations = [
+        migrations.AddField(
+            model_name="artifact",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="collection",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="feature",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="featurevalue",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="project",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="record",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="recordrecord",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="reference",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="run",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="schema",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="storage",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="transform",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+        migrations.AddField(
+            model_name="ulabel",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(blank=True, default=False),
+        ),
+    ]

lamindb/migrations/0126_alter_artifact_is_locked_alter_collection_is_locked_and_more.py ADDED Viewed

@@ -0,0 +1,105 @@
+# Generated by Django 5.1.12 on 2025-09-29 07:51
+from django.db import migrations
+import lamindb.base.fields
+class Migration(migrations.Migration):
+    dependencies = [
+        ("lamindb", "0125_artifact_is_locked_collection_is_locked_and_more"),
+    ]
+    operations = [
+        migrations.AlterField(
+            model_name="artifact",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="collection",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="feature",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="featurevalue",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="project",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="record",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="recordrecord",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="reference",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="run",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="schema",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="storage",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="transform",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+        migrations.AlterField(
+            model_name="ulabel",
+            name="is_locked",
+            field=lamindb.base.fields.BooleanField(
+                blank=True, db_default=False, default=False
+            ),
+        ),
+    ]

lamindb/migrations/0127_alter_run_status_code_feature_dtype.py ADDED Viewed

@@ -0,0 +1,31 @@
+# Generated by Django 5.1.12 on 2025-09-30 17:16
+from django.db import migrations, models
+class Migration(migrations.Migration):
+    dependencies = [
+        (
+            "lamindb",
+            "0126_alter_artifact_is_locked_alter_collection_is_locked_and_more",
+        ),
+    ]
+    operations = [
+        migrations.AlterField(
+            model_name="run",
+            name="_status_code",
+            field=models.SmallIntegerField(
+                db_default=-3, db_index=True, default=-3, null=True
+            ),
+        ),
+        migrations.AddConstraint(
+            model_name="feature",
+            constraint=models.CheckConstraint(
+                condition=models.Q(
+                    ("is_type", True), ("dtype__isnull", False), _connector="OR"
+                ),
+                name="dtype_not_null_when_is_type_false",
+            ),
+        ),
+    ]

lamindb/migrations/0128_artifact__real_key.py ADDED Viewed

@@ -0,0 +1,21 @@
+# Generated by Django 5.2 on 2025-10-01 09:07
+from django.db import migrations
+import lamindb.base.fields
+class Migration(migrations.Migration):
+    dependencies = [
+        ("lamindb", "0127_alter_run_status_code_feature_dtype"),
+    ]
+    operations = [
+        migrations.AddField(
+            model_name="artifact",
+            name="_real_key",
+            field=lamindb.base.fields.CharField(
+                blank=True, db_index=True, default=None, max_length=1024, null=True
+            ),
+        ),
+    ]

lamindb 1.11.3__py3-none-any.whl → 1.12.1__py3-none-any.whl

lamindb 1.11.3py3-none-any.whl → 1.12.1py3-none-any.whl