lamindb 0.69.10__py3-none-any.whl → 0.70.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
lamindb/__init__.py CHANGED
@@ -40,7 +40,7 @@ Modules & settings:
40
40
 
41
41
  """
42
42
 
43
- __version__ = "0.69.10" # denote a release candidate for 0.1.0 with 0.1rc1
43
+ __version__ = "0.70.0" # denote a release candidate for 0.1.0 with 0.1rc1
44
44
 
45
45
  import os as _os
46
46
 
lamindb/_artifact.py CHANGED
@@ -238,7 +238,7 @@ def get_stat_or_artifact(
238
238
  "💡 you can make this error a warning:\n"
239
239
  " ln.settings.upon_artifact_create_if_hash_exists"
240
240
  )
241
- raise RuntimeError(f"{msg}\n{hint}")
241
+ raise FileExistsError(f"{msg}\n{hint}")
242
242
  elif settings.upon_artifact_create_if_hash_exists == "warn_create_new":
243
243
  logger.warning(
244
244
  "creating new Artifact object despite existing artifact with same hash:"
@@ -246,10 +246,12 @@ def get_stat_or_artifact(
246
246
  )
247
247
  return size, hash, hash_type, n_objects
248
248
  else:
249
- from_trash = "(from trash)" if result[0].visibility == -1 else ""
250
- logger.warning(
251
- f"returning existing artifact with same hash{from_trash}: {result[0]}"
252
- )
249
+ if result[0].visibility == -1:
250
+ raise FileExistsError(
251
+ f"You're trying to re-create this artifact in trash: {result[0]}"
252
+ "Either permanently delete it with `artifact.delete(permanent=True)` or restore it with `artifact.restore()`"
253
+ )
254
+ logger.warning(f"returning existing artifact with same hash: {result[0]}")
253
255
  return result[0]
254
256
  else:
255
257
  return size, hash, hash_type, n_objects
@@ -331,6 +333,15 @@ def get_artifact_kwargs_from_data(
331
333
  using_key=using_key,
332
334
  )
333
335
  if isinstance(stat_or_artifact, Artifact):
336
+ # update the run of the existing artifact
337
+ if run is not None:
338
+ # save the information that this artifact was previously
339
+ # produced by another run
340
+ if stat_or_artifact.run is not None:
341
+ stat_or_artifact.run.replicated_output_artifacts.add(stat_or_artifact)
342
+ # update the run of the artifact with the latest run
343
+ stat_or_artifact.run = run
344
+ stat_or_artifact.transform = run.transform
334
345
  return stat_or_artifact, None
335
346
  else:
336
347
  size, hash, hash_type, n_objects = stat_or_artifact
@@ -854,7 +865,7 @@ def load(self, is_run_input: bool | None = None, stream: bool = False, **kwargs)
854
865
 
855
866
 
856
867
  # docstring handled through attach_func_to_class_method
857
- def stage(self, is_run_input: bool | None = None) -> Path:
868
+ def cache(self, is_run_input: bool | None = None) -> Path:
858
869
  _track_run_input(self, is_run_input)
859
870
 
860
871
  using_key = settings._using_key
@@ -932,10 +943,10 @@ def _delete_skip_storage(artifact, *args, **kwargs) -> None:
932
943
 
933
944
 
934
945
  # docstring handled through attach_func_to_class_method
935
- def save(self, *args, **kwargs) -> None:
946
+ def save(self, upload: bool | None = None, **kwargs) -> None:
936
947
  access_token = kwargs.pop("access_token", None)
937
948
 
938
- self._save_skip_storage(*args, **kwargs)
949
+ self._save_skip_storage(**kwargs)
939
950
 
940
951
  from lamindb._save import check_and_attempt_clearing, check_and_attempt_upload
941
952
 
@@ -951,9 +962,9 @@ def save(self, *args, **kwargs) -> None:
951
962
  raise RuntimeError(exception)
952
963
 
953
964
 
954
- def _save_skip_storage(file, *args, **kwargs) -> None:
965
+ def _save_skip_storage(file, **kwargs) -> None:
955
966
  save_feature_sets(file)
956
- super(Artifact, file).save(*args, **kwargs)
967
+ super(Artifact, file).save(**kwargs)
957
968
  save_feature_set_links(file)
958
969
 
959
970
 
@@ -998,7 +1009,7 @@ METHOD_NAMES = [
998
1009
  "from_df",
999
1010
  "from_mudata",
1000
1011
  "backed",
1001
- "stage",
1012
+ "cache",
1002
1013
  "load",
1003
1014
  "delete",
1004
1015
  "save",
@@ -1024,5 +1035,6 @@ for name in METHOD_NAMES:
1024
1035
  Artifact._delete_skip_storage = _delete_skip_storage
1025
1036
  Artifact._save_skip_storage = _save_skip_storage
1026
1037
  Artifact.path = path
1038
+ Artifact.stage = cache
1027
1039
  # this seems a Django-generated function
1028
1040
  delattr(Artifact, "get_visibility_display")
lamindb/_collection.py CHANGED
@@ -116,6 +116,17 @@ def __init__(
116
116
  logger.warning(
117
117
  f"returning existing collection with same hash: {existing_collection}"
118
118
  )
119
+ # update the run of the existing artifact
120
+ if run is not None:
121
+ # save the information that this artifact was previously
122
+ # produced by another run
123
+ if existing_collection.run is not None:
124
+ existing_collection.run.replicated_output_collections.add(
125
+ existing_collection
126
+ )
127
+ # update the run of the artifact with the latest run
128
+ existing_collection.run = run
129
+ existing_collection.transform = run.transform
119
130
  init_self_from_db(collection, existing_collection)
120
131
  for slot, feature_set in collection.features._feature_set_by_slot.items():
121
132
  if slot in feature_sets:
@@ -227,7 +238,7 @@ def mapped(
227
238
  logger.warning(f"Ignoring artifact with suffix {artifact.suffix}")
228
239
  continue
229
240
  elif not stream:
230
- path_list.append(artifact.stage())
241
+ path_list.append(artifact.cache())
231
242
  else:
232
243
  path_list.append(artifact.path)
233
244
  ds = MappedCollection(
@@ -248,11 +259,11 @@ def mapped(
248
259
 
249
260
 
250
261
  # docstring handled through attach_func_to_class_method
251
- def stage(self, is_run_input: bool | None = None) -> list[UPath]:
262
+ def cache(self, is_run_input: bool | None = None) -> list[UPath]:
252
263
  _track_run_input(self, is_run_input)
253
264
  path_list = []
254
265
  for artifact in self.artifacts.all():
255
- path_list.append(artifact.stage())
266
+ path_list.append(artifact.cache())
256
267
  return path_list
257
268
 
258
269
 
@@ -355,7 +366,7 @@ def artifacts(self) -> QuerySet:
355
366
  METHOD_NAMES = [
356
367
  "__init__",
357
368
  "mapped",
358
- "stage",
369
+ "cache",
359
370
  "load",
360
371
  "delete",
361
372
  "save",
@@ -377,3 +388,4 @@ for name in METHOD_NAMES:
377
388
  # this seems a Django-generated function
378
389
  delattr(Collection, "get_visibility_display")
379
390
  Collection.artifacts = artifacts
391
+ Collection.stage = cache
lamindb/_finish.py CHANGED
@@ -43,39 +43,35 @@ def finish(i_saved_the_notebook: bool = False):
43
43
  "Please pass `i_saved_the_notebook=True` to `ln.finish()`, save the notebook, and re-run this cell."
44
44
  )
45
45
  return None
46
- notebook_content = read_notebook(run_context.path) # type: ignore
47
- if not check_last_cell(notebook_content, "i_saved_the_notebook"):
48
- raise CallFinishInLastCell(
49
- "Can only run `ln.finish(i_saved_the_notebook=True)` from the last code cell of the notebook."
50
- )
51
46
  save_run_context_core(
52
47
  run=run_context.run,
53
48
  transform=run_context.transform,
54
49
  filepath=run_context.path,
55
50
  finished_at=True,
56
- notebook_content=notebook_content,
57
51
  )
58
52
  else:
59
53
  # scripts
54
+ # save_run_context_core was already called during ln.track()
60
55
  run_context.run.finished_at = datetime.now(timezone.utc) # update run time
61
56
  run_context.run.save()
62
57
 
63
58
 
64
- # do not type because we need to be aware of lnschema_core import order
65
59
  def save_run_context_core(
66
60
  *,
67
61
  run: Run,
68
62
  transform: Transform,
69
63
  filepath: Path,
70
64
  transform_family: QuerySet | None = None,
71
- is_consecutive: bool = True,
72
65
  finished_at: bool = False,
73
- notebook_content=None, # nbproject.Notebook
74
66
  ) -> str | None:
75
67
  import lamindb as ln
76
68
 
77
69
  ln.settings.verbosity = "success"
78
70
 
71
+ # for scripts, things are easy
72
+ is_consecutive = True
73
+ source_code_path = filepath
74
+ # for notebooks, we need more work
79
75
  if transform.type == TransformType.notebook:
80
76
  try:
81
77
  import nbstripout
@@ -88,62 +84,52 @@ def save_run_context_core(
88
84
  "install nbproject & nbstripout: pip install nbproject nbstripout"
89
85
  )
90
86
  return None
91
- if notebook_content is None:
92
- notebook_content = read_notebook(filepath) # type: ignore
87
+ notebook_content = read_notebook(filepath) # type: ignore
93
88
  is_consecutive = check_consecutiveness(notebook_content)
94
89
  if not is_consecutive:
90
+ msg = " Do you still want to proceed with finishing? (y/n) "
95
91
  if os.getenv("LAMIN_TESTING") is None:
96
- decide = input(
97
- " Do you still want to proceed with publishing? (y/n) "
98
- )
92
+ response = input(msg)
99
93
  else:
100
- decide = "n"
101
- if decide != "y":
102
- logger.error("Aborted (non-consecutive)!")
94
+ response = "n"
95
+ if response != "y":
103
96
  return "aborted-non-consecutive"
104
-
105
97
  # convert the notebook file to html
106
98
  # log_level is set to 40 to silence the nbconvert logging
107
- result = subprocess.run(
99
+ subprocess.run(
108
100
  "jupyter nbconvert --to html"
109
101
  f" {filepath.as_posix()} --Application.log_level=40",
110
102
  shell=True,
103
+ check=True,
111
104
  )
112
105
  # move the temporary file into the cache dir in case it's accidentally
113
106
  # in an existing storage location -> we want to move associated
114
107
  # artifacts into default storage and not register them in an existing
115
108
  # location
116
- filepath_html = filepath.with_suffix(".html") # current location
109
+ filepath_html_orig = filepath.with_suffix(".html") # current location
110
+ filepath_html = ln_setup.settings.storage.cache_dir / filepath_html_orig.name
111
+ # don't use Path.rename here because of cross-device link error
112
+ # https://laminlabs.slack.com/archives/C04A0RMA0SC/p1710259102686969
117
113
  shutil.move(
118
- filepath_html, # type: ignore
119
- ln_setup.settings.storage.cache_dir / filepath_html.name,
120
- ) # move; don't use Path.rename here because of cross-device link error
121
- # see https://laminlabs.slack.com/archives/C04A0RMA0SC/p1710259102686969
122
- filepath_html = (
123
- ln_setup.settings.storage.cache_dir / filepath_html.name
124
- ) # adjust location
125
- assert result.returncode == 0
126
- # copy the notebook file to a temporary file
114
+ filepath_html_orig, # type: ignore
115
+ filepath_html,
116
+ )
117
+ # strip the output from the notebook to create the source code file
118
+ # first, copy the notebook file to a temporary file in the cache
127
119
  source_code_path = ln_setup.settings.storage.cache_dir / filepath.name
128
120
  shutil.copy2(filepath, source_code_path) # copy
129
- result = subprocess.run(f"nbstripout {source_code_path}", shell=True)
130
- assert result.returncode == 0
131
- else:
132
- source_code_path = filepath
121
+ subprocess.run(f"nbstripout {source_code_path}", shell=True, check=True)
133
122
  # find initial versions of source codes and html reports
134
- initial_report = None
135
- initial_source = None
123
+ prev_report = None
124
+ prev_source = None
136
125
  if transform_family is None:
137
126
  transform_family = transform.versions
138
127
  if len(transform_family) > 0:
139
128
  for prev_transform in transform_family.order_by("-created_at"):
140
- # check for id to avoid query
141
129
  if prev_transform.latest_report_id is not None:
142
- # any previous latest report of this transform is OK!
143
- initial_report = prev_transform.latest_report
130
+ prev_report = prev_transform.latest_report
144
131
  if prev_transform.source_code_id is not None:
145
- # any previous source code id is OK!
146
- initial_source = prev_transform.source_code
132
+ prev_source = prev_transform.source_code
147
133
  ln.settings.silence_file_run_transform_warning = True
148
134
  # register the source code
149
135
  if transform.source_code is not None:
@@ -173,7 +159,7 @@ def save_run_context_core(
173
159
  source_code_path,
174
160
  description=f"Source of transform {transform.uid}",
175
161
  version=transform.version,
176
- is_new_version_of=initial_source,
162
+ is_new_version_of=prev_source,
177
163
  visibility=0, # hidden file
178
164
  run=False,
179
165
  )
@@ -207,7 +193,7 @@ def save_run_context_core(
207
193
  report_file = ln.Artifact(
208
194
  filepath_html,
209
195
  description=f"Report of run {run.uid}",
210
- is_new_version_of=initial_report,
196
+ is_new_version_of=prev_report,
211
197
  visibility=0, # hidden file
212
198
  run=False,
213
199
  )
lamindb/_from_values.py CHANGED
@@ -247,7 +247,8 @@ def index_iterable(iterable: Iterable) -> pd.Index:
247
247
 
248
248
 
249
249
  def _print_values(names: list, n: int = 20) -> str:
250
- print_values = ", ".join([f"'{name}'" for name in names[:n]])
250
+ names = list(set(names))
251
+ print_values = ", ".join([f"'{name}'" for name in names[:n] if name != "None"])
251
252
  if len(names) > n:
252
253
  print_values += ", ..."
253
254
  return print_values
lamindb/core/_data.py CHANGED
@@ -94,6 +94,23 @@ def save_feature_set_links(self: Artifact | Collection) -> None:
94
94
  bulk_create(links, ignore_conflicts=True)
95
95
 
96
96
 
97
+ def format_repr(value: Registry, exclude: list[str] | str | None = None) -> str:
98
+ if isinstance(exclude, str):
99
+ exclude = [exclude]
100
+ exclude_fields = set() if exclude is None else set(exclude)
101
+ exclude_fields.update(["created_at", "updated_at"])
102
+
103
+ fields = [
104
+ f
105
+ for f in value.__repr__(include_foreign_keys=False).split(", ")
106
+ if not any(f"{excluded_field}=" in f for excluded_field in exclude_fields)
107
+ ]
108
+ repr = ", ".join(fields)
109
+ if not repr.endswith(")"):
110
+ repr += ")"
111
+ return repr
112
+
113
+
97
114
  @doc_args(Data.describe.__doc__)
98
115
  def describe(self: Data):
99
116
  """{}."""
@@ -117,7 +134,7 @@ def describe(self: Data):
117
134
  msg += f"{colors.green('Provenance')}:\n "
118
135
  related_msg = "".join(
119
136
  [
120
- f"📎 {field}: {self.__getattribute__(field)}\n "
137
+ f"📎 {field}: {format_repr(self.__getattribute__(field))}\n "
121
138
  for field in foreign_key_fields
122
139
  if self.__getattribute__(field) is not None
123
140
  ]
@@ -91,6 +91,8 @@ def get_feature_set_links(host: Artifact | Collection) -> QuerySet:
91
91
  def print_features(self: Data) -> str:
92
92
  from lamindb._from_values import _print_values
93
93
 
94
+ from ._data import format_repr
95
+
94
96
  msg = ""
95
97
  features_lookup = Feature.objects.using(self._state.db).lookup().dict()
96
98
  for slot, feature_set in self.features._feature_set_by_slot.items():
@@ -98,12 +100,16 @@ def print_features(self: Data) -> str:
98
100
  features = feature_set.members
99
101
  name_field = get_default_str_field(features[0])
100
102
  feature_names = [getattr(feature, name_field) for feature in features]
101
- msg += f" {colors.bold(slot)}: {feature_set}\n"
103
+ msg += (
104
+ f" {colors.bold(slot)}: {format_repr(feature_set, exclude='hash')}\n"
105
+ )
102
106
  print_values = _print_values(feature_names, n=20)
103
107
  msg += f" {print_values}\n"
104
108
  else:
105
109
  df_slot = feature_set.features.df()
106
- msg += f" {colors.bold(slot)}: {feature_set}\n"
110
+ msg += (
111
+ f" {colors.bold(slot)}: {format_repr(feature_set, exclude='hash')}\n"
112
+ )
107
113
  for _, row in df_slot.iterrows():
108
114
  if row["type"] == "category" and row["registries"] is not None:
109
115
  labels = self.labels.get(
@@ -360,7 +360,6 @@ class run_context:
360
360
  run=cls.run,
361
361
  transform=cls.transform,
362
362
  filepath=cls.path,
363
- is_consecutive=True,
364
363
  )
365
364
  return None
366
365
 
lamindb/core/_settings.py CHANGED
@@ -64,7 +64,7 @@ class Settings:
64
64
  FAQ: :doc:`/faq/idempotency`
65
65
  """
66
66
  track_run_inputs: bool = True
67
- """Track files as input upon `.load()`, `.stage()` and `.backed()`.
67
+ """Track files as input upon `.load()`, `.cache()` and `.backed()`.
68
68
 
69
69
  Requires a global run context with :func:`~lamindb.track` was created!
70
70
 
@@ -299,7 +299,7 @@ def anndata_human_immune_cells(
299
299
  adata = sc.read('Global.h5ad')
300
300
  adata.obs = adata.obs[['donor_id', 'tissue', 'cell_type', 'assay', 'tissue_ontology_term_id', 'cell_type_ontology_term_id', 'assay_ontology_term_id']].copy()
301
301
  sc.pp.subsample(adata, fraction=0.005)
302
- del adata.uns["development_stage_ontology_term_id_colors"]
302
+ del adata.uns["development_cache_ontology_term_id_colors"]
303
303
  del adata.uns["sex_ontology_term_id_colors"]
304
304
  adata.write('human_immune.h5ad')
305
305
  """
@@ -2,39 +2,48 @@ from __future__ import annotations
2
2
 
3
3
  import json
4
4
  from datetime import datetime, timezone
5
+ from typing import TYPE_CHECKING
5
6
 
6
7
  import lamindb_setup as ln_setup
7
8
  from lamin_utils import logger
8
9
 
9
10
  from lamindb._artifact import Artifact
10
11
 
12
+ if TYPE_CHECKING:
13
+ from vitessce import VitessceConfig
14
+
11
15
 
12
- # tested in lamin-spatial
13
- # can't type vitessce_config because can't assume it's installed
14
- def save_vitessce_config(vitessce_config, description: str) -> Artifact:
16
+ # tested & context in https://github.com/laminlabs/lamin-spatial
17
+ def save_vitessce_config(vitessce_config: VitessceConfig, description: str) -> Artifact:
15
18
  """Takes a ``VitessceConfig`` object and saves it as an artifact.
16
19
 
17
20
  Args:
18
21
  vitessce_config (``VitessceConfig``): A VitessceConfig object.
19
22
  description: A description for the artifact.
20
23
  """
24
+ # can't assume vitessce is installed
21
25
  from vitessce import VitessceConfig
22
26
 
23
- assert isinstance(vitessce_config, VitessceConfig)
27
+ # create a local _data export_ in a folder
24
28
  timestamp = datetime.now(timezone.utc).isoformat().split(".")[0]
25
- vitesse_export = f"./vitessce_export_{timestamp}.vitessce"
26
- vitessce_config.export(to="files", base_url="", out_dir=vitesse_export)
27
- logger.important(f"local export: {vitesse_export}")
28
- artifact = Artifact(vitesse_export, description=description)
29
+ vitesse_export_folder = f"./vitessce_export_{timestamp}.vitessce"
30
+ vitessce_config.export(to="files", base_url="", out_dir=vitesse_export_folder)
31
+ logger.important(f"local export: {vitesse_export_folder}")
32
+ # create an artifact and store the local export in th cloud
33
+ artifact = Artifact(vitesse_export_folder, description=description)
29
34
  artifact.save()
35
+ # create a JSON export that points to the data in the cloud
30
36
  config_dict = vitessce_config.to_dict(base_url=artifact.path.to_url())
31
37
  logger.important(f"base url: {artifact.path.to_url()}")
38
+ # manually place that JSON export into the local data export folder
32
39
  config_filename = "vitessce_config.json"
33
- config_file_local_path = f"{vitesse_export}/{config_filename}"
40
+ config_file_local_path = f"{vitesse_export_folder}/{config_filename}"
34
41
  with open(config_file_local_path, "w") as file:
35
42
  json.dump(config_dict, file)
43
+ # manually place that JSON export into the previously registered artifact folder
36
44
  config_file_path = artifact.path / config_filename
37
45
  config_file_path.upload_from(config_file_local_path)
46
+ # log the the URLs
38
47
  logger.important(f"config url: {config_file_path.to_url()}")
39
48
  slug = ln_setup.settings.instance.slug
40
49
  logger.important(f"go to: https://lamin.ai/{slug}/artifact/{artifact.uid}")
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: lamindb
3
- Version: 0.69.10
3
+ Version: 0.70.0
4
4
  Summary: A data framework for biology.
5
5
  Author-email: Lamin Labs <open-source@lamin.ai>
6
6
  Requires-Python: >=3.8
@@ -9,10 +9,10 @@ Classifier: Programming Language :: Python :: 3.8
9
9
  Classifier: Programming Language :: Python :: 3.9
10
10
  Classifier: Programming Language :: Python :: 3.10
11
11
  Classifier: Programming Language :: Python :: 3.11
12
- Requires-Dist: lnschema_core==0.64.11
13
- Requires-Dist: lamindb_setup==0.69.0
12
+ Requires-Dist: lnschema_core==0.65.0
13
+ Requires-Dist: lamindb_setup==0.69.2
14
14
  Requires-Dist: lamin_utils==0.13.1
15
- Requires-Dist: lamin_cli==0.12.2
15
+ Requires-Dist: lamin_cli==0.12.3
16
16
  Requires-Dist: rapidfuzz
17
17
  Requires-Dist: pyarrow
18
18
  Requires-Dist: typing_extensions!=4.6.0
@@ -1,13 +1,13 @@
1
- lamindb/__init__.py,sha256=CV6kzbhp0QdBkY2VOTJYYsswxKzqvzSgqoDE3Bf-cFE,2164
1
+ lamindb/__init__.py,sha256=BT6UZlIvg7VG1sTaQ_k81e1b2ATVgR3eTSMjFitNerA,2163
2
2
  lamindb/_annotate.py,sha256=BXYWFATifbfRVmLFIgE4cZ4Fls4lkH2WXAEL2o7v-XM,43035
3
- lamindb/_artifact.py,sha256=OiM6BMz7Vm852QGvyr24QZlXU0dHRID6CF50U0cBVnE,36491
3
+ lamindb/_artifact.py,sha256=eUh0_dCD_wLMUL7HxWTKjk7WGeyFh1olJVMkQETzLUU,37193
4
4
  lamindb/_can_validate.py,sha256=qA6Ni9scObcIeYzuudVymgOjQVLLxnGNofBSDNDaqfY,14557
5
- lamindb/_collection.py,sha256=xzya4M_vU8lp0nksqxj2BfSWOTwLTr9Sp6Kwp47so5g,13985
5
+ lamindb/_collection.py,sha256=Yo72YdmAKP4O6awoJAFhRKKzM6rKelS0inII8sKk0ls,14545
6
6
  lamindb/_feature.py,sha256=srAKchY7gqD-h-cWlEiAWuHlpFKFwv0PWIA-JX0Go8c,6758
7
7
  lamindb/_feature_set.py,sha256=AzjOcHzQajpeikPOAic-aj0z_C5b7VpHVegg3ThRSLw,9045
8
8
  lamindb/_filter.py,sha256=xnjJzjF3Zj4dK_Kfymvhgczk27MhhXz5ZYc7XINbgHY,1331
9
- lamindb/_finish.py,sha256=4mCoDw24gXeOS_EALuUYIA57OqmcZWIi0Fk5fEDwmCg,8798
10
- lamindb/_from_values.py,sha256=OboM5lTysxjyu-wMWtD_Cw7SWJk8fG36tAQwb6FKM8k,12160
9
+ lamindb/_finish.py,sha256=SIPIIMAXM2d00L6VHMf2qFiOHuTyAlLy-5qRJ-BYaIQ,8107
10
+ lamindb/_from_values.py,sha256=Mupz-mW_aftlhSktH1cgSD4hVaQJW93VehoFJhD15h4,12207
11
11
  lamindb/_is_versioned.py,sha256=0PgRCmxEmYDcAjllLSOYZm132B1lW6QgmBBERhRyFt0,1341
12
12
  lamindb/_parents.py,sha256=N9T8jbd3eaoHDLE9TD1y1QgGcO81E6Brapy8LILzRCQ,14790
13
13
  lamindb/_query_manager.py,sha256=3zokXqxgj9vTJBnN2sbYKS-q69fyDDPF_aGq_rFHzXU,4066
@@ -21,12 +21,12 @@ lamindb/_ulabel.py,sha256=e5dw9h1tR0_u-DMn7Gzx0WhUhV5w7j4v3QbnLWQV7eI,1941
21
21
  lamindb/_utils.py,sha256=LGdiW4k3GClLz65vKAVRkL6Tw-Gkx9DWAdez1jyA5bE,428
22
22
  lamindb/_view.py,sha256=GV1FrqIMmdooEkA-5zvcTWgV1nqx1sehi6WdWEaFpxM,2171
23
23
  lamindb/core/__init__.py,sha256=MB1gEMKUf0GBQrI3dH8WRZOZQmWR4HIojXK_hXXVdqA,1235
24
- lamindb/core/_data.py,sha256=zxsrtf8a3PBzni1KLNVST45dxUgK11K7U6o9pmfK-xU,16905
25
- lamindb/core/_feature_manager.py,sha256=MHEU3I9m9p69TaTz1WTzAsimUan51RhxWV8G--_0BA8,15615
24
+ lamindb/core/_data.py,sha256=En3v29eiJARy5l7nSsttAsDsqDLTZ4-xM8fCNyVzExI,17465
25
+ lamindb/core/_feature_manager.py,sha256=LlYgU71AoTnrseWFCq-oZkUAYWITtRR7BNFm0AhHe-c,15773
26
26
  lamindb/core/_label_manager.py,sha256=0RtegYnK3zIisOnd970EobOrHMpp7OCH-mEoPrPXw2c,9075
27
27
  lamindb/core/_mapped_collection.py,sha256=_OwFZh5SePDUD70XIK5kngv3we_Z5-YdGHNfpUSatSQ,19469
28
- lamindb/core/_run_context.py,sha256=GS593lxHsbQyhbrp6ppzZ0r-fVe6W099NDXM6xyg8-U,17509
29
- lamindb/core/_settings.py,sha256=32109tBsMcwdGlNTWAGR7YBuCVXrrVfzIEKHWVk1bBQ,5727
28
+ lamindb/core/_run_context.py,sha256=xcsPhpabm2a-PnwH-vDJ4Mx4qQLdFsn4ZUpWMWKZgoM,17472
29
+ lamindb/core/_settings.py,sha256=r9si7wJb31tI4vfz9dUN4iXe6QQU7FjnqAEsHy2UDzM,5727
30
30
  lamindb/core/_sync_git.py,sha256=IlTqw55inPp_RZbN_YScaCeKza7LeF9mClQw55W3_d4,3921
31
31
  lamindb/core/_track_environment.py,sha256=xLZ6kgzxWS6MWZ5LQ_wkbJX99vmYOT8iQ-Fz4OHCgWw,754
32
32
  lamindb/core/_transform_settings.py,sha256=eV96QKX9jOojjzF-a0oo0wXQsMXN2F6QV7orE06oFC8,161
@@ -36,7 +36,7 @@ lamindb/core/fields.py,sha256=Jgi_XI-iTe6cT7oD8FV_JqEpjN1Q9rZWwL8VLtj4jkA,164
36
36
  lamindb/core/types.py,sha256=xeQF2x40p2pR9eIVQrXT74RrS810z2fbjmTRTSQUqPM,230
37
37
  lamindb/core/versioning.py,sha256=DsEHpCueNwhRiIaRH5-O8H_1fJVNtWslCRx30YiIS5o,3080
38
38
  lamindb/core/datasets/__init__.py,sha256=zRP98oqUAaXhqWyKMiH0s_ImVIuNeziQQ2kQ_t0f-DI,1353
39
- lamindb/core/datasets/_core.py,sha256=ZPsDETZp-SqQelK5O0l7sDZFjuz8Sy93UbTfSYqP9cc,20191
39
+ lamindb/core/datasets/_core.py,sha256=36vUOYFkX_4hBAnM_BujV5BRARMI5b9iI_SM9qS7wGc,20191
40
40
  lamindb/core/datasets/_fake.py,sha256=BZF9R_1iF0HDnvtZNqL2FtsjSMuqDIfuFxnw_LJYIh4,953
41
41
  lamindb/core/storage/__init__.py,sha256=9alBNtyH59VnoWJS-IdjLwFKlK-kgeCGl6jXk0_wGeQ,369
42
42
  lamindb/core/storage/_anndata_sizes.py,sha256=aXO3OB--tF5MChenSsigW6Q-RuE8YJJOUTVukkLrv9A,1029
@@ -45,10 +45,10 @@ lamindb/core/storage/_zarr.py,sha256=0i9-cJPjieIsp5UpK-IyRPkHAF-iKkWgpkWviSni2MM
45
45
  lamindb/core/storage/file.py,sha256=AEMbrC6oWoIp3vs4F2bgm50EVBxkCGbN9R4na7Wanaw,7754
46
46
  lamindb/core/storage/object.py,sha256=37p8CSlfSlWPVuuD3MFcwQRj1n_kovLKVImh9SCR4Eg,1601
47
47
  lamindb/integrations/__init__.py,sha256=aH2PmO2m4-vwIifMYTB0Fyyr_gZWtVnV71jT0tVWSw0,123
48
- lamindb/integrations/_vitessce.py,sha256=xLlFr_GzoY5RjyouPFEO-W7crBlTVQdHR2ns1IcCZFc,1673
48
+ lamindb/integrations/_vitessce.py,sha256=l3GPkzQXcwnMypbm8vDkITjognELjX8ucLaiqy99Jgg,2131
49
49
  lamindb/setup/__init__.py,sha256=OwZpZzPDv5lPPGXZP7-zK6UdO4FHvvuBh439yZvIp3A,410
50
50
  lamindb/setup/core/__init__.py,sha256=SevlVrc2AZWL3uALbE5sopxBnIZPWZ1IB0NBDudiAL8,167
51
- lamindb-0.69.10.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
52
- lamindb-0.69.10.dist-info/WHEEL,sha256=EZbGkh7Ie4PoZfRQ8I0ZuP9VklN_TvcZ6DSE5Uar4z4,81
53
- lamindb-0.69.10.dist-info/METADATA,sha256=R4DYvAOjBwW0ywfjHvYo4xLUABytQWm6iGg8LE8yfbU,2837
54
- lamindb-0.69.10.dist-info/RECORD,,
51
+ lamindb-0.70.0.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
52
+ lamindb-0.70.0.dist-info/WHEEL,sha256=EZbGkh7Ie4PoZfRQ8I0ZuP9VklN_TvcZ6DSE5Uar4z4,81
53
+ lamindb-0.70.0.dist-info/METADATA,sha256=Mj16sNRVTgeMpFSL9mNUzF9HBaGo1RzERYp2ejiW8Xk,2835
54
+ lamindb-0.70.0.dist-info/RECORD,,