lamindb 0.68.1__py3-none-any.whl → 0.68.2__py3-none-any.whl

lamindb/__init__.py

@@ -55,7 +55,7 @@ Modules & settings:
 
 """
 
-__version__ = "0.68.1"  # denote a release candidate for 0.1.0 with 0.1rc1
+__version__ = "0.68.2"  # denote a release candidate for 0.1.0 with 0.1rc1
 
 import os as _os
 

lamindb/_transform.py

@@ -1,13 +1,11 @@
-from typing import TYPE_CHECKING, Optional
+from typing import Optional
 
-from lnschema_core.models import TRANSFORM_TYPE_DEFAULT, Artifact, Run, Transform
+from lnschema_core.models import Artifact, Run, Transform
+from lnschema_core.types import TransformType
 
 from ._run import delete_run_artifacts
 from .core.versioning import get_uid_from_old_version, init_uid
 
-if TYPE_CHECKING:
-    from lnschema_core.types import TransformType
-
 
 def __init__(transform: Transform, *args, **kwargs):
     if len(args) == len(transform._meta.concrete_fields):
@@ -23,7 +21,7 @@ def __init__(transform: Transform, *args, **kwargs):
     (kwargs.pop("initial_version_id") if "initial_version_id" in kwargs else None)
     version: Optional[str] = kwargs.pop("version") if "version" in kwargs else None
     type: Optional[TransformType] = (
-        kwargs.pop("type") if "type" in kwargs else TRANSFORM_TYPE_DEFAULT
+        kwargs.pop("type") if "type" in kwargs else TransformType.pipeline
     )
     reference: Optional[str] = (
         kwargs.pop("reference") if "reference" in kwargs else None

lamindb/core/_run_context.py

@@ -25,12 +25,6 @@ msg_path_failed = (
 )
 
 
-# we don't want a real error here, as this is so frequent
-# in VSCode
-class UpdateNbWithNonInteractiveEditor(SystemExit):
-    pass
-
-
 class NotebookNotSavedError(Exception):
     pass
 
@@ -290,7 +284,7 @@ class run_context:
                 transform_type = (
                     TransformType.notebook
                     if is_run_from_ipython
-                    else TransformType.pipeline
+                    else TransformType.script
                 )
                 cls._create_or_load_transform(
                     stem_uid=stem_uid,

{lamindb-0.68.1.dist-info → lamindb-0.68.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: lamindb
-Version: 0.68.1
+Version: 0.68.2
 Summary: A data framework for biology.
 Author-email: Lamin Labs <open-source@lamin.ai>
 Requires-Python: >=3.8
@@ -9,10 +9,10 @@ Classifier: Programming Language :: Python :: 3.8
 Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
-Requires-Dist: lnschema_core==0.62.1
+Requires-Dist: lnschema_core==0.63.0
 Requires-Dist: lamindb_setup==0.66.1
 Requires-Dist: lamin_utils==0.13.0
-Requires-Dist: lamin_cli==0.9.1
+Requires-Dist: lamin_cli==0.9.3
 Requires-Dist: rapidfuzz
 Requires-Dist: pyarrow
 Requires-Dist: typing_extensions!=4.6.0

{lamindb-0.68.1.dist-info → lamindb-0.68.2.dist-info}/RECORD

@@ -1,4 +1,4 @@
-lamindb/__init__.py,sha256=B_IqT2Eon9j1AW-1PveK2YPE7eLF-QNj_DphpDhucj4,2277
+lamindb/__init__.py,sha256=dT1kw0e8P_VQAeAbtpZQK_tPcxm7W7oFoG9kFKvnLiM,2277
 lamindb/_artifact.py,sha256=DzOWGupWqb0EUJYunmrxPU2xIPkQwGiSbtVdABvTZm0,36316
 lamindb/_collection.py,sha256=esjFYaVPIz7E5J-dk3FppAOZsimszd4m7MYGxErmrk4,18097
 lamindb/_feature.py,sha256=B_vjiH7wOW0mugZOmIHYKkAe20E1Ca9PnMppAW9KJU4,6677
@@ -13,7 +13,7 @@ lamindb/_registry.py,sha256=d_ZLG2Y4No_KBGoY-Xl9iia3enF5J50ktpC2E21ERM4,19160
 lamindb/_run.py,sha256=O5TcVPZqgdUvk4nBmI_HXzvWOG_Zr3B_HMDaw228w-4,1719
 lamindb/_save.py,sha256=2V3u0F2FFJZBlaBtViBYLIPDIVlwY-uXlhPDfA-wCMo,11102
 lamindb/_storage.py,sha256=VW8xq3VRv58-ciholvOdlcgvp_OIlLxx5GxLt-e2Irs,614
-lamindb/_transform.py,sha256=3xvd7siMzep0adU_WPl9TZP-PrVOLtPyLg2kexCjQGU,3444
+lamindb/_transform.py,sha256=yVff1BbkIYSFD3mY-GgDgjCx0IE1mGVthC4rh6Yk07g,3382
 lamindb/_ulabel.py,sha256=euXsDPD7wC99oopLXVkT-vq7f3E6-zP4Z4akI-yh0aM,1913
 lamindb/_utils.py,sha256=LGdiW4k3GClLz65vKAVRkL6Tw-Gkx9DWAdez1jyA5bE,428
 lamindb/_validate.py,sha256=w7lrUGTWldpvwaRiXBRrjfU_ZRidA7CooOu_r5MbocY,14569
@@ -23,7 +23,7 @@ lamindb/core/_data.py,sha256=lJRdEBW_CkcH13FuchTEMYcoW5nLiam8Uy8d_DDULek,17210
 lamindb/core/_feature_manager.py,sha256=a1HXGmMgSRWEsE7nmlMMKYZzDo8oFAmieOM6HGa-yyU,13901
 lamindb/core/_label_manager.py,sha256=zrWDSd2AkR6fKsGDxLSWqHC9fz9BcGlavPZEh92Wzjg,9063
 lamindb/core/_mapped_collection.py,sha256=uoaX59BnA_EqkRvF-bQaNS6mi1PihSPTym02PEbadZg,16795
-lamindb/core/_run_context.py,sha256=B4WuF_UbrJmgQRKtnLo4F8hPe3LZupbugr-ojbw2yoo,17274
+lamindb/core/_run_context.py,sha256=HztuUbj4DJ-fCaP9a6lgRjZrHtSAzU-j5vnTuCQP0Yc,17139
 lamindb/core/_settings.py,sha256=vJ2gIfYneapsiwhwnzbYnmbTOhkBaUJgVABSSeV9HOc,4691
 lamindb/core/_track_environment.py,sha256=QjHWbyl2u8J4hbJG8Q_ToFaZIgS-H15Ej6syJgk-dvY,662
 lamindb/core/_transform_settings.py,sha256=pOjCWAW0Lst_GtZqscOM76SJo8yo69BFi7DfGr0fnG8,186
@@ -43,7 +43,7 @@ lamindb/core/storage/file.py,sha256=FP9G6Z7Uxt86Ro2WvewDaVgKrrErW2VOCFK3-3vSUNI,
 lamindb/core/storage/object.py,sha256=MPUb2M8Fleq2j9x1Ryqr3BETmvsDKyf11Ifvbxd3NpA,1097
 lamindb/setup/__init__.py,sha256=OwZpZzPDv5lPPGXZP7-zK6UdO4FHvvuBh439yZvIp3A,410
 lamindb/setup/core/__init__.py,sha256=LqIIvJNcONxkqjbnP6CUaP4d45Lbd6TSMAcXFp4C7_8,231
-lamindb-0.68.1.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
-lamindb-0.68.1.dist-info/WHEEL,sha256=EZbGkh7Ie4PoZfRQ8I0ZuP9VklN_TvcZ6DSE5Uar4z4,81
-lamindb-0.68.1.dist-info/METADATA,sha256=M0uRg89se5FM_4l0awtzBEomj3PYYJf7f4X8A2TLLNQ,2848
-lamindb-0.68.1.dist-info/RECORD,,
+lamindb-0.68.2.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
+lamindb-0.68.2.dist-info/WHEEL,sha256=EZbGkh7Ie4PoZfRQ8I0ZuP9VklN_TvcZ6DSE5Uar4z4,81
+lamindb-0.68.2.dist-info/METADATA,sha256=RP8GwGeqWVOpb6HazhQ7hqwidk3mWiFSzsZgxY6lyZQ,2848
+lamindb-0.68.2.dist-info/RECORD,,