kaiko-eva 0.0.0.dev8__py3-none-any.whl → 0.0.1__py3-none-any.whl

eva/vision/__init__.py

@@ -7,7 +7,7 @@ except ImportError as e:
     msg = (
         "eva vision requirements are not installed.\n\n"
         "Please pip install as follows:\n"
-        '  python -m pip install "eva[vision]" --upgrade'
+        '  python -m pip install "kaiko-eva[vision]" --upgrade'
     )
     raise ImportError(str(e) + "\n\n" + msg) from e
 

{kaiko_eva-0.0.0.dev8.dist-info → kaiko_eva-0.0.1.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: kaiko-eva
-Version: 0.0.0.dev8
+Version: 0.0.1
 Summary: Evaluation Framework for oncology foundation models.
 Keywords: machine-learning evaluation-framework oncology foundation-models
 Author-Email: Ioannis Gatopoulos <ioannis@kaiko.ai>, Nicolas Känzig <nicolas@kaiko.ai>, Roman Moser <roman@kaiko.ai>
@@ -264,7 +264,8 @@ _Oncology FM Evaluation Framework by kaiko.ai_
 
 <br />
 
-_`eva`_ is an evaluation framework for oncology foundation models (FMs) by [kaiko.ai](https://kaiko.ai/). Check out the [documentation](https://kaiko-ai.github.io/eva/) for more information.
+_`eva`_ is an evaluation framework for oncology foundation models (FMs) by [kaiko.ai](https://kaiko.ai/).
+Check out the [documentation](https://kaiko-ai.github.io/eva/) for more information.
 
 ### Highlights:
 - Easy and reliable benchmark of Oncology FMs
@@ -303,13 +304,28 @@ _eva_ can be used directly from the terminal as a CLI tool as follows:
 eva {fit,predict,predict_fit} --config url/or/path/to/the/config.yaml 
 ```
 
-For example, to perform a downstream evaluation of DINO ViT-S/16 on the BACH dataset with linear probing by first inferring the embeddings and performing 5 sequential fits, execute:
+When used as a CLI tool, `_eva_` supports configuration files (`.yaml`) as an argument to define its functionality.
+Native supported configs can be found at the [configs](https://github.com/kaiko-ai/eva/tree/main/configs) directory
+of the repo. Apart from cloning the repo, you can download the latest config folder as `.zip` from your browser from
+[here](https://download-directory.github.io/?url=https://github.com/kaiko-ai/eva/tree/main/configs). Alternatively,
+from a specific release the configs can be downloaded from the terminal as follows:
 ```sh
+curl -LO https://github.com/kaiko-ai/eva/releases/download/0.0.1/configs.zip | unzip configs.zip
+```
+
+For example, to perform a downstream evaluation of DINO ViT-S/16 on the BACH dataset with
+linear probing by first inferring the embeddings and performing 5 sequential fits, execute:
+```sh
+# from a locally stored config file
+eva predict_fit --config ./configs/vision/dino_vit/offline/bach.yaml
+
+# from a remote stored config file
 eva predict_fit --config https://raw.githubusercontent.com/kaiko-ai/eva/main/configs/vision/dino_vit/offline/bach.yaml
 ```
 
 > [!NOTE] 
-> All the datasets that support automatic download in the repo have by default the option to automatically download set to false. For automatic download you have to manually set download=true.
+> All the datasets that support automatic download in the repo have by default the option to automatically download set to false.
+> For automatic download you have to manually set download=true.
 
 
 To view all the possibles, execute:
@@ -317,7 +333,8 @@ To view all the possibles, execute:
 eva --help
 ```
 
-For more information, please refer to the [documentation](https://kaiko-ai.github.io/eva/dev/user-guide/tutorials/offline_vs_online/) and [tutorials](https://kaiko-ai.github.io/eva/dev/user-guide/advanced/replicate_evaluations/).
+For more information, please refer to the [documentation](https://kaiko-ai.github.io/eva/dev/user-guide/tutorials/offline_vs_online/)
+and [tutorials](https://kaiko-ai.github.io/eva/dev/user-guide/advanced/replicate_evaluations/).
 
 ## Benchmarks
 
@@ -357,7 +374,8 @@ _References_:
 
 ## Contributing
 
-_eva_ is an open source project and welcomes contributions of all kinds. Please checkout the [developer](./docs/DEVELOPER_GUIDE.md) and [contributing guide](./docs/CONTRIBUTING.md) for help on how to do so.
+_eva_ is an open source project and welcomes contributions of all kinds. Please checkout the [developer](./docs/DEVELOPER_GUIDE.md)
+and [contributing guide](./docs/CONTRIBUTING.md) for help on how to do so.
 
 All contributors must follow the [code of conduct](./docs/CODE_OF_CONDUCT.md).
 

{kaiko_eva-0.0.0.dev8.dist-info → kaiko_eva-0.0.1.dist-info}/RECORD

@@ -1,4 +1,3 @@
-eva/.DS_Store,sha256=nHFfks7iwDvTdxEQbx3nJ4A8L95xoUm4jl5emHwGusQ,6148
 eva/__init__.py,sha256=bYBwklT7diG8NBIBDbpwjN4RUsvGv0ShWBXPxWgz404,518
 eva/__main__.py,sha256=kM5tQ0egTuBWixNLLx9QU-PpS2Bbs3zE3nYE6b2vWa0,282
 eva/__version__.py,sha256=YFR4oOlvPg0sS4Ni7GJ_vU42VTs5WiWp6odK7yH4TBY,611
@@ -73,7 +72,7 @@ eva/core/utils/io/__init__.py,sha256=SAME0kuSvDE1DKFJwMBmnCkpDAy4ujXuRTSJsHNhwUI
 eva/core/utils/io/dataframe.py,sha256=CIHFowljH17waDkJ9YJVEVXAIcxMwoLjUgoBttiNk8w,509
 eva/core/utils/multiprocessing.py,sha256=PxUxMyvI62lghyWF46O5RNL-J7DUR2IrXSwdkbhC0ic,1383
 eva/core/utils/workers.py,sha256=hfx63M82qNg0Dwhre2tl53MnhtRsV7APaDONM9nhVB8,634
-eva/vision/__init__.py,sha256=Pp9FZomuqfbZdKSOmgSGfNYk8ISpXf7tLVBZfoFcybk,432
+eva/vision/__init__.py,sha256=Z9AuPmTO-i73pUtq3IkZzwRlY1E5xCE8IZiyl5S71TM,438
 eva/vision/data/__init__.py,sha256=aoKPmX8P2Q2k2W3nlq8vFU41FV6Sze-0SDuWtU-ETh4,111
 eva/vision/data/datasets/__init__.py,sha256=aV4qPqtlt0PnaGoxUW_xEwAr8b8ddkl_YE4_fAdavds,497
 eva/vision/data/datasets/_utils.py,sha256=5GAZEHn-VezxTXaW1jVZO5zvdVl1Vz8_5gV2qkoMu4s,1414
@@ -104,8 +103,8 @@ eva/vision/utils/io/_utils.py,sha256=JzOt7Frj6ScF_aNjFtfHBn4ROnl6NhUZucmQhLc4Cww
 eva/vision/utils/io/image.py,sha256=2jzeVFMvIRhuTkIrQeLyu0y8GttLp6rWRjO9I2uw-I8,1489
 eva/vision/utils/io/nifti.py,sha256=ph9w8dNNSsJG2wI3NJNPTLyWdz2S0i9jD068nHXVVJs,1510
 eva/vision/utils/io/text.py,sha256=uECChKjeKi4KQ-NqdO7ywAFS_TOEp2DQ5QQcuG8cb-4,472
-kaiko_eva-0.0.0.dev8.dist-info/METADATA,sha256=M4MrBZhhW_RFJcR3J8kjSgRN7lauwINudUoEO1y6AO8,21567
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-kaiko_eva-0.0.0.dev8.dist-info/entry_points.txt,sha256=oqtS2Yt5EBY4saLyCBC3Zev3huCORKTKWyPovX7QR8g,73
-kaiko_eva-0.0.0.dev8.dist-info/licenses/LICENSE,sha256=e6AEzr7j_R-PYr2qLO-JwLn8y70jbVD3U2mxbRmwcI4,11338
-kaiko_eva-0.0.0.dev8.dist-info/RECORD,,
+kaiko_eva-0.0.1.dist-info/METADATA,sha256=ftjXJlWbHwUT3YNSBxtaMClK_iUHh95oHl0POcZVNCA,22362
+kaiko_eva-0.0.1.dist-info/WHEEL,sha256=N2J68yzZqJh3mI_Wg92rwhw0rtJDFpZj9bwQIMJgaVg,90
+kaiko_eva-0.0.1.dist-info/entry_points.txt,sha256=oqtS2Yt5EBY4saLyCBC3Zev3huCORKTKWyPovX7QR8g,73
+kaiko_eva-0.0.1.dist-info/licenses/LICENSE,sha256=e6AEzr7j_R-PYr2qLO-JwLn8y70jbVD3U2mxbRmwcI4,11338
+kaiko_eva-0.0.1.dist-info/RECORD,,