junifer 0.0.6.dev248__py3-none-any.whl → 0.0.6.dev258__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (131) hide show
  1. junifer/_version.py +2 -2
  2. junifer/api/decorators.py +1 -2
  3. junifer/api/functions.py +18 -18
  4. junifer/api/queue_context/gnu_parallel_local_adapter.py +4 -4
  5. junifer/api/queue_context/htcondor_adapter.py +4 -4
  6. junifer/api/queue_context/tests/test_gnu_parallel_local_adapter.py +3 -3
  7. junifer/api/queue_context/tests/test_htcondor_adapter.py +3 -3
  8. junifer/api/tests/test_functions.py +32 -32
  9. junifer/cli/cli.py +3 -3
  10. junifer/cli/parser.py +4 -4
  11. junifer/cli/tests/test_cli.py +5 -5
  12. junifer/cli/utils.py +5 -6
  13. junifer/configs/juseless/datagrabbers/ixi_vbm.py +2 -2
  14. junifer/configs/juseless/datagrabbers/tests/test_ucla.py +2 -2
  15. junifer/configs/juseless/datagrabbers/ucla.py +4 -4
  16. junifer/data/_dispatch.py +11 -14
  17. junifer/data/coordinates/_ants_coordinates_warper.py +16 -6
  18. junifer/data/coordinates/_coordinates.py +7 -7
  19. junifer/data/coordinates/_fsl_coordinates_warper.py +3 -3
  20. junifer/data/masks/_ants_mask_warper.py +3 -3
  21. junifer/data/masks/_fsl_mask_warper.py +3 -3
  22. junifer/data/masks/_masks.py +6 -9
  23. junifer/data/masks/tests/test_masks.py +4 -4
  24. junifer/data/parcellations/_ants_parcellation_warper.py +3 -3
  25. junifer/data/parcellations/_fsl_parcellation_warper.py +3 -3
  26. junifer/data/parcellations/_parcellations.py +19 -19
  27. junifer/data/parcellations/tests/test_parcellations.py +1 -2
  28. junifer/data/pipeline_data_registry_base.py +3 -2
  29. junifer/data/template_spaces.py +3 -3
  30. junifer/data/tests/test_data_utils.py +1 -2
  31. junifer/data/utils.py +4 -3
  32. junifer/datagrabber/aomic/id1000.py +2 -2
  33. junifer/datagrabber/aomic/piop1.py +5 -5
  34. junifer/datagrabber/aomic/piop2.py +5 -5
  35. junifer/datagrabber/aomic/tests/test_id1000.py +3 -3
  36. junifer/datagrabber/aomic/tests/test_piop1.py +4 -4
  37. junifer/datagrabber/aomic/tests/test_piop2.py +4 -4
  38. junifer/datagrabber/base.py +12 -11
  39. junifer/datagrabber/datalad_base.py +3 -3
  40. junifer/datagrabber/dmcc13_benchmark.py +8 -8
  41. junifer/datagrabber/hcp1200/datalad_hcp1200.py +3 -3
  42. junifer/datagrabber/hcp1200/hcp1200.py +8 -8
  43. junifer/datagrabber/hcp1200/tests/test_hcp1200.py +2 -1
  44. junifer/datagrabber/multiple.py +7 -7
  45. junifer/datagrabber/pattern.py +10 -10
  46. junifer/datagrabber/pattern_validation_mixin.py +10 -10
  47. junifer/datagrabber/tests/test_datalad_base.py +7 -8
  48. junifer/datagrabber/tests/test_dmcc13_benchmark.py +2 -2
  49. junifer/datagrabber/tests/test_pattern_validation_mixin.py +6 -6
  50. junifer/datareader/default.py +6 -6
  51. junifer/external/nilearn/junifer_connectivity_measure.py +2 -2
  52. junifer/external/nilearn/junifer_nifti_spheres_masker.py +4 -4
  53. junifer/external/nilearn/tests/test_junifer_connectivity_measure.py +15 -15
  54. junifer/external/nilearn/tests/test_junifer_nifti_spheres_masker.py +2 -3
  55. junifer/markers/base.py +8 -8
  56. junifer/markers/brainprint.py +7 -9
  57. junifer/markers/complexity/complexity_base.py +6 -8
  58. junifer/markers/complexity/hurst_exponent.py +5 -5
  59. junifer/markers/complexity/multiscale_entropy_auc.py +5 -5
  60. junifer/markers/complexity/perm_entropy.py +5 -5
  61. junifer/markers/complexity/range_entropy.py +5 -5
  62. junifer/markers/complexity/range_entropy_auc.py +5 -5
  63. junifer/markers/complexity/sample_entropy.py +5 -5
  64. junifer/markers/complexity/weighted_perm_entropy.py +5 -5
  65. junifer/markers/ets_rss.py +7 -7
  66. junifer/markers/falff/_afni_falff.py +1 -2
  67. junifer/markers/falff/_junifer_falff.py +1 -2
  68. junifer/markers/falff/falff_base.py +2 -4
  69. junifer/markers/falff/falff_parcels.py +7 -7
  70. junifer/markers/falff/falff_spheres.py +6 -6
  71. junifer/markers/functional_connectivity/crossparcellation_functional_connectivity.py +6 -6
  72. junifer/markers/functional_connectivity/edge_functional_connectivity_parcels.py +7 -7
  73. junifer/markers/functional_connectivity/edge_functional_connectivity_spheres.py +6 -6
  74. junifer/markers/functional_connectivity/functional_connectivity_base.py +10 -10
  75. junifer/markers/functional_connectivity/functional_connectivity_parcels.py +7 -7
  76. junifer/markers/functional_connectivity/functional_connectivity_spheres.py +6 -6
  77. junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_parcels.py +1 -2
  78. junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_spheres.py +1 -2
  79. junifer/markers/functional_connectivity/tests/test_functional_connectivity_parcels.py +3 -3
  80. junifer/markers/functional_connectivity/tests/test_functional_connectivity_spheres.py +3 -3
  81. junifer/markers/parcel_aggregation.py +8 -8
  82. junifer/markers/reho/_afni_reho.py +1 -2
  83. junifer/markers/reho/_junifer_reho.py +1 -2
  84. junifer/markers/reho/reho_base.py +2 -4
  85. junifer/markers/reho/reho_parcels.py +8 -8
  86. junifer/markers/reho/reho_spheres.py +7 -7
  87. junifer/markers/sphere_aggregation.py +8 -8
  88. junifer/markers/temporal_snr/temporal_snr_base.py +8 -8
  89. junifer/markers/temporal_snr/temporal_snr_parcels.py +6 -6
  90. junifer/markers/temporal_snr/temporal_snr_spheres.py +5 -5
  91. junifer/markers/utils.py +3 -3
  92. junifer/onthefly/_brainprint.py +2 -2
  93. junifer/onthefly/read_transform.py +3 -3
  94. junifer/pipeline/marker_collection.py +4 -4
  95. junifer/pipeline/pipeline_component_registry.py +5 -4
  96. junifer/pipeline/pipeline_step_mixin.py +7 -7
  97. junifer/pipeline/tests/test_pipeline_component_registry.py +2 -3
  98. junifer/pipeline/tests/test_pipeline_step_mixin.py +19 -19
  99. junifer/pipeline/tests/test_update_meta_mixin.py +4 -4
  100. junifer/pipeline/update_meta_mixin.py +2 -2
  101. junifer/pipeline/utils.py +5 -5
  102. junifer/preprocess/base.py +10 -10
  103. junifer/preprocess/confounds/fmriprep_confound_remover.py +11 -14
  104. junifer/preprocess/confounds/tests/test_fmriprep_confound_remover.py +1 -2
  105. junifer/preprocess/smoothing/smoothing.py +7 -7
  106. junifer/preprocess/warping/_ants_warper.py +3 -4
  107. junifer/preprocess/warping/_fsl_warper.py +3 -4
  108. junifer/preprocess/warping/space_warper.py +6 -6
  109. junifer/preprocess/warping/tests/test_space_warper.py +3 -4
  110. junifer/stats.py +4 -4
  111. junifer/storage/base.py +14 -13
  112. junifer/storage/hdf5.py +21 -20
  113. junifer/storage/pandas_base.py +12 -11
  114. junifer/storage/sqlite.py +11 -11
  115. junifer/storage/tests/test_hdf5.py +1 -2
  116. junifer/storage/tests/test_sqlite.py +2 -2
  117. junifer/storage/tests/test_utils.py +8 -7
  118. junifer/storage/utils.py +7 -7
  119. junifer/testing/datagrabbers.py +9 -10
  120. junifer/tests/test_stats.py +2 -2
  121. junifer/typing/_typing.py +6 -9
  122. junifer/utils/helpers.py +2 -3
  123. junifer/utils/logging.py +5 -5
  124. junifer/utils/singleton.py +3 -3
  125. {junifer-0.0.6.dev248.dist-info → junifer-0.0.6.dev258.dist-info}/METADATA +2 -2
  126. {junifer-0.0.6.dev248.dist-info → junifer-0.0.6.dev258.dist-info}/RECORD +131 -131
  127. {junifer-0.0.6.dev248.dist-info → junifer-0.0.6.dev258.dist-info}/AUTHORS.rst +0 -0
  128. {junifer-0.0.6.dev248.dist-info → junifer-0.0.6.dev258.dist-info}/LICENSE.md +0 -0
  129. {junifer-0.0.6.dev248.dist-info → junifer-0.0.6.dev258.dist-info}/WHEEL +0 -0
  130. {junifer-0.0.6.dev248.dist-info → junifer-0.0.6.dev258.dist-info}/entry_points.txt +0 -0
  131. {junifer-0.0.6.dev248.dist-info → junifer-0.0.6.dev258.dist-info}/top_level.txt +0 -0
@@ -1,22 +1,22 @@
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- junifer/_version.py,sha256=c9at3dTDJliiVXJD4N375bgGPl2MVMwHVvZh9Sx-SO0,428
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+ junifer/_version.py,sha256=-HB5jqFqzc7zEZaNPXVSCoHvW4V223fvaUsizOfAdfQ,428
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- junifer/api/decorators.py,sha256=YRhZvjBuPV5QWjdnYwWF-OIaMwVs0OOfsLjj07F_ncQ,2878
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- junifer/api/functions.py,sha256=WRNWdap3HCrLyr_9GInxoY4U_yhQrIc1M3UFkyuR3dQ,12845
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+ junifer/api/decorators.py,sha256=kEIcJIznNG_HwrvG9i7bnM1AeZOQPbSBmgDQ3yWFmIQ,2854
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+ junifer/api/functions.py,sha256=GB0CODQEAx6WOEFa7g1rSbWx8_4Qw8DQRdfC4JVPkrA,12826
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- junifer/api/queue_context/htcondor_adapter.py,sha256=92pt4M_r52inBVlQ2M8Di6quEKW4Xcq3qVNRXaV4rGY,13233
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+ junifer/api/queue_context/gnu_parallel_local_adapter.py,sha256=HBsH9ql0AnU87KfiUEpQ7rCakbFEf4dlz8JzYdlqEpg,9542
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+ junifer/api/queue_context/htcondor_adapter.py,sha256=MihS26FJX92_0ysoJm-INP1YUoRcnU_S_WVCgbkoD08,13214
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+ junifer/api/queue_context/tests/test_gnu_parallel_local_adapter.py,sha256=Nv_0axIW4SOE7-TyQXd_nM_0A_kDiFAgrkQcmQafW_s,6585
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+ junifer/api/queue_context/tests/test_htcondor_adapter.py,sha256=-8bA1E-2sS0RMwB-_78l11hud-G-YKJR6x-tUpdg7vs,8600
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- junifer/cli/parser.py,sha256=oZf0oiFcp7vTTMFmFv9qcIqnKMS5wZSCqBmKggN_F0c,8355
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+ junifer/cli/cli.py,sha256=kUAlbYIYQ5mKf_Q40Q0f73OMkkAz8B6Xy5eL6I4iY6U,13195
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+ junifer/cli/parser.py,sha256=3zmmdsrYzIci3TS8xGVlWeLUIgtaH2Z12OYnqG1ZKAc,8336
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+ junifer/cli/utils.py,sha256=AbPQC0Kl-tHMNKiPxp_01gLAGD3IGoLbsq3rXyPMM-c,3116
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+ junifer/cli/tests/test_cli.py,sha256=AYL4my12GmFRCbI3JV7-rju32heYxAqbXNwnV8PwqVY,10982
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+ junifer/data/coordinates/_coordinates.py,sha256=fBXVvuTxYLTNBSrQiTCiQsxpT0SdbQze3DYuGGgz_mY,12501
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+ junifer/data/masks/_fsl_mask_warper.py,sha256=_7UkX3-wFXQs4KwxopO-QjMyB6aeq1GAkiGSGpG-OzM,2412
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+ junifer/data/masks/_masks.py,sha256=VsWY4GOrTOV6XsX-Usl8H_6s8AT6LLveBvLBUr6woFE,20729
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+ junifer/data/parcellations/_fsl_parcellation_warper.py,sha256=pUsLbR34Ry3e_0_5KxngI-jU06YmXTU795k-SjJHmig,2676
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+ junifer/data/parcellations/_parcellations.py,sha256=uOqoucoynv--iEftrhdnOd3jBcqq9PSDgs9DYhbeN24,65611
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+ junifer/datagrabber/aomic/tests/test_id1000.py,sha256=wie7Sc6MIpMyIbDMouXJ7r2_BRbdQv27rTsviwE19LE,3277
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- junifer/external/nilearn/junifer_nifti_spheres_masker.py,sha256=DbSK2hKrgpHZ_vCRLbVv3YJpLZNkEAG0HFfQQpG6zdU,16546
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+ junifer/external/nilearn/junifer_connectivity_measure.py,sha256=R868Z6ltm2OiMgEVEBBtqTTtWkwhU5O7yhNSQDYudDA,17316
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+ junifer/external/nilearn/junifer_nifti_spheres_masker.py,sha256=1CqtGFpfgVR2sK_pDYsBlgAEg-fIG5CkKzXzTTXG7EY,16533
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+ junifer/external/nilearn/tests/test_junifer_connectivity_measure.py,sha256=NEYVq5mrc9VMDkrm8Aq7gLgWk5XrzVriDFCw34R3XbI,33927
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- junifer-0.0.6.dev248.dist-info/AUTHORS.rst,sha256=rmULKpchpSol4ExWFdm-qu4fkpSZPYqIESVJBZtGb6E,163
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+ junifer-0.0.6.dev258.dist-info/AUTHORS.rst,sha256=rmULKpchpSol4ExWFdm-qu4fkpSZPYqIESVJBZtGb6E,163
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+ junifer-0.0.6.dev258.dist-info/RECORD,,