junifer 0.0.6.dev175__py3-none-any.whl → 0.0.6.dev194__py3-none-any.whl

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Files changed (78) hide show
  1. junifer/_version.py +2 -2
  2. junifer/data/__init__.pyi +17 -31
  3. junifer/data/_dispatch.py +251 -0
  4. junifer/data/coordinates/__init__.py +9 -0
  5. junifer/data/coordinates/__init__.pyi +5 -0
  6. junifer/data/coordinates/_ants_coordinates_warper.py +96 -0
  7. junifer/data/coordinates/_coordinates.py +356 -0
  8. junifer/data/coordinates/_fsl_coordinates_warper.py +83 -0
  9. junifer/data/{tests → coordinates/tests}/test_coordinates.py +25 -31
  10. junifer/data/masks/__init__.py +9 -0
  11. junifer/data/masks/__init__.pyi +6 -0
  12. junifer/data/masks/_ants_mask_warper.py +144 -0
  13. junifer/data/masks/_fsl_mask_warper.py +87 -0
  14. junifer/data/masks/_masks.py +624 -0
  15. junifer/data/{tests → masks/tests}/test_masks.py +63 -58
  16. junifer/data/parcellations/__init__.py +9 -0
  17. junifer/data/parcellations/__init__.pyi +6 -0
  18. junifer/data/parcellations/_ants_parcellation_warper.py +154 -0
  19. junifer/data/parcellations/_fsl_parcellation_warper.py +91 -0
  20. junifer/data/{parcellations.py → parcellations/_parcellations.py} +450 -473
  21. junifer/data/{tests → parcellations/tests}/test_parcellations.py +73 -81
  22. junifer/data/pipeline_data_registry_base.py +74 -0
  23. junifer/data/utils.py +4 -0
  24. junifer/markers/complexity/hurst_exponent.py +2 -2
  25. junifer/markers/complexity/multiscale_entropy_auc.py +2 -2
  26. junifer/markers/complexity/perm_entropy.py +2 -2
  27. junifer/markers/complexity/range_entropy.py +2 -2
  28. junifer/markers/complexity/range_entropy_auc.py +2 -2
  29. junifer/markers/complexity/sample_entropy.py +2 -2
  30. junifer/markers/complexity/weighted_perm_entropy.py +2 -2
  31. junifer/markers/ets_rss.py +2 -2
  32. junifer/markers/falff/falff_parcels.py +2 -2
  33. junifer/markers/falff/falff_spheres.py +2 -2
  34. junifer/markers/functional_connectivity/edge_functional_connectivity_parcels.py +1 -1
  35. junifer/markers/functional_connectivity/edge_functional_connectivity_spheres.py +1 -1
  36. junifer/markers/functional_connectivity/functional_connectivity_parcels.py +1 -1
  37. junifer/markers/functional_connectivity/functional_connectivity_spheres.py +1 -1
  38. junifer/markers/functional_connectivity/tests/test_functional_connectivity_parcels.py +3 -3
  39. junifer/markers/functional_connectivity/tests/test_functional_connectivity_spheres.py +2 -2
  40. junifer/markers/parcel_aggregation.py +11 -7
  41. junifer/markers/reho/reho_parcels.py +2 -2
  42. junifer/markers/reho/reho_spheres.py +2 -2
  43. junifer/markers/sphere_aggregation.py +11 -7
  44. junifer/markers/temporal_snr/temporal_snr_parcels.py +2 -2
  45. junifer/markers/temporal_snr/temporal_snr_spheres.py +2 -2
  46. junifer/markers/tests/test_ets_rss.py +3 -3
  47. junifer/markers/tests/test_parcel_aggregation.py +24 -24
  48. junifer/markers/tests/test_sphere_aggregation.py +6 -6
  49. junifer/pipeline/pipeline_component_registry.py +1 -1
  50. junifer/preprocess/confounds/fmriprep_confound_remover.py +6 -3
  51. {junifer-0.0.6.dev175.dist-info → junifer-0.0.6.dev194.dist-info}/METADATA +1 -1
  52. {junifer-0.0.6.dev175.dist-info → junifer-0.0.6.dev194.dist-info}/RECORD +76 -62
  53. {junifer-0.0.6.dev175.dist-info → junifer-0.0.6.dev194.dist-info}/WHEEL +1 -1
  54. junifer/data/coordinates.py +0 -408
  55. junifer/data/masks.py +0 -670
  56. /junifer/data/{VOIs → coordinates/VOIs}/meta/AutobiographicalMemory_VOIs.txt +0 -0
  57. /junifer/data/{VOIs → coordinates/VOIs}/meta/CogAC_VOIs.txt +0 -0
  58. /junifer/data/{VOIs → coordinates/VOIs}/meta/CogAR_VOIs.txt +0 -0
  59. /junifer/data/{VOIs → coordinates/VOIs}/meta/DMNBuckner_VOIs.txt +0 -0
  60. /junifer/data/{VOIs → coordinates/VOIs}/meta/Dosenbach2010_MNI_VOIs.txt +0 -0
  61. /junifer/data/{VOIs → coordinates/VOIs}/meta/Empathy_VOIs.txt +0 -0
  62. /junifer/data/{VOIs → coordinates/VOIs}/meta/Motor_VOIs.txt +0 -0
  63. /junifer/data/{VOIs → coordinates/VOIs}/meta/MultiTask_VOIs.txt +0 -0
  64. /junifer/data/{VOIs → coordinates/VOIs}/meta/PhysioStress_VOIs.txt +0 -0
  65. /junifer/data/{VOIs → coordinates/VOIs}/meta/Power2011_MNI_VOIs.txt +0 -0
  66. /junifer/data/{VOIs → coordinates/VOIs}/meta/Power2013_MNI_VOIs.tsv +0 -0
  67. /junifer/data/{VOIs → coordinates/VOIs}/meta/Rew_VOIs.txt +0 -0
  68. /junifer/data/{VOIs → coordinates/VOIs}/meta/Somatosensory_VOIs.txt +0 -0
  69. /junifer/data/{VOIs → coordinates/VOIs}/meta/ToM_VOIs.txt +0 -0
  70. /junifer/data/{VOIs → coordinates/VOIs}/meta/VigAtt_VOIs.txt +0 -0
  71. /junifer/data/{VOIs → coordinates/VOIs}/meta/WM_VOIs.txt +0 -0
  72. /junifer/data/{VOIs → coordinates/VOIs}/meta/eMDN_VOIs.txt +0 -0
  73. /junifer/data/{VOIs → coordinates/VOIs}/meta/eSAD_VOIs.txt +0 -0
  74. /junifer/data/{VOIs → coordinates/VOIs}/meta/extDMN_VOIs.txt +0 -0
  75. {junifer-0.0.6.dev175.dist-info → junifer-0.0.6.dev194.dist-info}/AUTHORS.rst +0 -0
  76. {junifer-0.0.6.dev175.dist-info → junifer-0.0.6.dev194.dist-info}/LICENSE.md +0 -0
  77. {junifer-0.0.6.dev175.dist-info → junifer-0.0.6.dev194.dist-info}/entry_points.txt +0 -0
  78. {junifer-0.0.6.dev175.dist-info → junifer-0.0.6.dev194.dist-info}/top_level.txt +0 -0