junifer 0.0.5.dev180__py3-none-any.whl → 0.0.5.dev202__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (60) hide show
  1. junifer/_version.py +2 -2
  2. junifer/data/masks/ukb/UKB_15K_GM_template.nii.gz +0 -0
  3. junifer/data/masks.py +36 -0
  4. junifer/data/tests/test_masks.py +17 -0
  5. junifer/datagrabber/tests/test_datalad_base.py +4 -4
  6. junifer/datagrabber/tests/test_pattern_datalad.py +4 -4
  7. junifer/markers/base.py +49 -23
  8. junifer/markers/brainprint.py +56 -265
  9. junifer/markers/complexity/complexity_base.py +23 -43
  10. junifer/markers/complexity/tests/test_hurst_exponent.py +4 -3
  11. junifer/markers/complexity/tests/test_multiscale_entropy_auc.py +4 -3
  12. junifer/markers/complexity/tests/test_perm_entropy.py +4 -3
  13. junifer/markers/complexity/tests/test_range_entropy.py +4 -3
  14. junifer/markers/complexity/tests/test_range_entropy_auc.py +4 -3
  15. junifer/markers/complexity/tests/test_sample_entropy.py +4 -3
  16. junifer/markers/complexity/tests/test_weighted_perm_entropy.py +4 -3
  17. junifer/markers/ets_rss.py +24 -42
  18. junifer/markers/falff/falff_base.py +17 -46
  19. junifer/markers/falff/falff_parcels.py +53 -27
  20. junifer/markers/falff/falff_spheres.py +57 -29
  21. junifer/markers/falff/tests/test_falff_parcels.py +39 -23
  22. junifer/markers/falff/tests/test_falff_spheres.py +39 -23
  23. junifer/markers/functional_connectivity/crossparcellation_functional_connectivity.py +32 -48
  24. junifer/markers/functional_connectivity/edge_functional_connectivity_parcels.py +16 -10
  25. junifer/markers/functional_connectivity/edge_functional_connectivity_spheres.py +13 -9
  26. junifer/markers/functional_connectivity/functional_connectivity_base.py +26 -40
  27. junifer/markers/functional_connectivity/functional_connectivity_parcels.py +6 -6
  28. junifer/markers/functional_connectivity/functional_connectivity_spheres.py +6 -6
  29. junifer/markers/functional_connectivity/tests/test_crossparcellation_functional_connectivity.py +8 -4
  30. junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_parcels.py +6 -3
  31. junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_spheres.py +6 -3
  32. junifer/markers/functional_connectivity/tests/test_functional_connectivity_parcels.py +6 -3
  33. junifer/markers/functional_connectivity/tests/test_functional_connectivity_spheres.py +10 -5
  34. junifer/markers/parcel_aggregation.py +40 -59
  35. junifer/markers/reho/reho_base.py +6 -27
  36. junifer/markers/reho/reho_parcels.py +23 -15
  37. junifer/markers/reho/reho_spheres.py +22 -16
  38. junifer/markers/reho/tests/test_reho_parcels.py +8 -3
  39. junifer/markers/reho/tests/test_reho_spheres.py +8 -3
  40. junifer/markers/sphere_aggregation.py +40 -59
  41. junifer/markers/temporal_snr/temporal_snr_base.py +20 -32
  42. junifer/markers/temporal_snr/temporal_snr_parcels.py +6 -6
  43. junifer/markers/temporal_snr/temporal_snr_spheres.py +6 -6
  44. junifer/markers/temporal_snr/tests/test_temporal_snr_parcels.py +6 -3
  45. junifer/markers/temporal_snr/tests/test_temporal_snr_spheres.py +6 -3
  46. junifer/markers/tests/test_brainprint.py +23 -12
  47. junifer/markers/tests/test_collection.py +9 -8
  48. junifer/markers/tests/test_ets_rss.py +15 -9
  49. junifer/markers/tests/test_markers_base.py +17 -18
  50. junifer/markers/tests/test_parcel_aggregation.py +93 -32
  51. junifer/markers/tests/test_sphere_aggregation.py +72 -19
  52. junifer/pipeline/pipeline_step_mixin.py +11 -1
  53. junifer/pipeline/tests/test_registry.py +1 -1
  54. {junifer-0.0.5.dev180.dist-info → junifer-0.0.5.dev202.dist-info}/METADATA +1 -1
  55. {junifer-0.0.5.dev180.dist-info → junifer-0.0.5.dev202.dist-info}/RECORD +60 -59
  56. {junifer-0.0.5.dev180.dist-info → junifer-0.0.5.dev202.dist-info}/WHEEL +1 -1
  57. {junifer-0.0.5.dev180.dist-info → junifer-0.0.5.dev202.dist-info}/AUTHORS.rst +0 -0
  58. {junifer-0.0.5.dev180.dist-info → junifer-0.0.5.dev202.dist-info}/LICENSE.md +0 -0
  59. {junifer-0.0.5.dev180.dist-info → junifer-0.0.5.dev202.dist-info}/entry_points.txt +0 -0
  60. {junifer-0.0.5.dev180.dist-info → junifer-0.0.5.dev202.dist-info}/top_level.txt +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: junifer
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- Version: 0.0.5.dev180
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+ Version: 0.0.5.dev202
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  Summary: JUelich NeuroImaging FEature extractoR
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  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
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  Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
@@ -1,5 +1,5 @@
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  junifer/__init__.py,sha256=-T9XmiCCL0j3YLx-0Pph15sPfL5FlcBDscajjJ-V4sU,604
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- junifer/_version.py,sha256=qo4yop6ut9LFgev0EsENpBz5BZ_dUgwq-jzypAN6ccM,428
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+ junifer/_version.py,sha256=SfX7XiFnafHKOiS803yiurBc4KSehKu8JZHgAVcL1wA,428
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  junifer/stats.py,sha256=BjQb2lfTGDP9l4UuQYmJFcJJNRfbJDGlNvC06SJaDDE,6237
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  junifer/api/__init__.py,sha256=lwyIF0hPc7fICuSoddJfay0LPqlTRxHJ_xbtizgFYZA,312
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  junifer/api/cli.py,sha256=53pews3mXkJ7DUDSkV51PbitYnuVAdQRkWG-gjO08Uw,16142
@@ -58,7 +58,7 @@ junifer/configs/juseless/datagrabbers/tests/test_ucla.py,sha256=NfEKlpaMNImiPLGy
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  junifer/configs/juseless/datagrabbers/tests/test_ukb_vbm.py,sha256=b9hjc1mgO--PSRC3id2EzzfE2yWNsuZ2UI47a6sfGZU,1025
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  junifer/data/__init__.py,sha256=orvgHyoKkgw9aAR5WCucKI7ZBu9dZL7e7au3TECFD-s,968
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  junifer/data/coordinates.py,sha256=1HH2Kz5nzZKN6-wJRmYotPH76fPaL1yYbCt8AhONogk,12496
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- junifer/data/masks.py,sha256=kUhH9_YNrT67CE3TEBfk2Uk8hpUr_KX3wxWfH27rXWU,20925
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+ junifer/data/masks.py,sha256=omKOJLnUpmI1yVUkckWy9HhzbFZuYbYdOyr49xFvEwU,21640
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  junifer/data/parcellations.py,sha256=mw1xa6yFWAaVktTkkpCt2ZgSUapZbPwloN2UoPdLzdg,65490
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  junifer/data/template_spaces.py,sha256=7I2Hgy-Wh-Uqm_vOvpYQ5H9CFg1Qn5YRX4QU-HZAloc,5796
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  junifer/data/utils.py,sha256=dIdhCJMJHoXsjTjEMi2b-NXyCiSKsFZQt-5Ca00Obd4,1330
@@ -81,12 +81,13 @@ junifer/data/VOIs/meta/WM_VOIs.txt,sha256=6uyH5nsv9i5bKS_aEYCgg3wgE7hjw5DI1gD37l
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  junifer/data/VOIs/meta/eMDN_VOIs.txt,sha256=p5D4GdBuGl1d5IbXhsuj3XIU6UGMxhzCR-T8Dwfxz30,382
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  junifer/data/VOIs/meta/extDMN_VOIs.txt,sha256=Ogx1QvqZcnXDM3ncF2ha78br8xwQ5wklSjHygtoLpyI,317
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+ junifer/data/masks/ukb/UKB_15K_GM_template.nii.gz,sha256=jcX1pDOrDsoph8cPMNFVKH5gZYio5G4rJNpOFXm9wJI,946636
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  junifer/data/masks/vickery-patil/CAT12_IXI555_MNI152_TMP_GS_GMprob0.2_clean.nii.gz,sha256=j6EY8EtRnUuRxeKgD65Q6B0GPEPIALKDJEIje1TfnAU,88270
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  junifer/data/masks/vickery-patil/CAT12_IXI555_MNI152_TMP_GS_GMprob0.2_clean_3mm.nii.gz,sha256=crb_y7YO1vjjf2PwbRJUm8KamPK6fx1y0B_l-E3g8FY,12862
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  junifer/data/masks/vickery-patil/GMprob0.2_cortex_3mm_NA_rm.nii.gz,sha256=jfMe_4H9XEnArYms5bSQbqS2V1_HbLHTfI5amQa_Pes,8700
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  junifer/data/tests/test_coordinates.py,sha256=BNkz9qFbnwAI0oVlIm_XrT-z4Vsia_rMtMVaoFXT6mU,4328
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  junifer/data/tests/test_data_utils.py,sha256=_DaiC8K79gs9HFHxr-udNeE2YTM6JA0-1i-K2cqK9qA,1087
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- junifer/data/tests/test_masks.py,sha256=qgrcBAX3oqrca8mKACDxdt_9sDXXUZIU8jTNDlJzLQU,15183
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+ junifer/data/tests/test_masks.py,sha256=pL42xTzrvy0qLCqpG5p5CdCCqjJ9n5nz7BCUofydfag,15723
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  junifer/data/tests/test_parcellations.py,sha256=ZEU1VHIK0AyxpclcJhG_0rQU0phaBU_dHP7Erfi3mN8,38222
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  junifer/data/tests/test_template_spaces.py,sha256=PJulN7xHpAcSOTY-UzTG_WPywZEBSlAZGiNG4gzk1_8,3144
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  junifer/datagrabber/__init__.py,sha256=uR31UhuNwNZ0i9m3oo8RZtHUyMbnG2sd1i9aLa6aG_o,967
@@ -110,11 +111,11 @@ junifer/datagrabber/hcp1200/hcp1200.py,sha256=xgIU-WZXrEvI7we2RX3sqKowKz1NxtdjtH
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  junifer/datagrabber/hcp1200/tests/test_hcp1200.py,sha256=KJ-Jq01l0a6TaboG898qjBdPTHG1E3PZtHCjJ7n-1X0,10765
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  junifer/datagrabber/tests/test_base.py,sha256=fZdVhNhvfht9lpTHrAUf5E6mAfNNUP7OTQ5KLaBQ1gI,3506
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  junifer/datagrabber/tests/test_datagrabber_utils.py,sha256=x1nqFiHI9xHBQFwXji0DPUG8crVoEzw6zmi3pKdhJQk,6513
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- junifer/datagrabber/tests/test_datalad_base.py,sha256=SYxUB9_4YPMfrb7iJM-aJCWbGa3EJfYz31wAUCNa03s,16285
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+ junifer/datagrabber/tests/test_datalad_base.py,sha256=71erxpAECuy8iLtkmq_SRqfP4sKQf4uEb3O8CThBHT0,16285
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  junifer/datagrabber/tests/test_dmcc13_benchmark.py,sha256=DcqkDXXBoabHFVbxekGR2NZyGeugGlxpOwXIwy38Ofg,9109
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- junifer/datagrabber/tests/test_pattern_datalad.py,sha256=hxw_aXBwHjUo-aUrHescBA2dn1bSJxh-0oV8495iIEA,6483
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+ junifer/datagrabber/tests/test_pattern_datalad.py,sha256=5lA4hkYNaIAVy3GjcVqBXj1d-3qd8-14Pv0z6QGqgtI,6483
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  junifer/datareader/__init__.py,sha256=9TXyHpy5o-yfs-q8QHGfjUCcWdORp7qv_jrokAOPBP8,293
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@@ -136,15 +137,15 @@ junifer/external/nilearn/__init__.py,sha256=Cx9SM-AHU2OmyC5n6YmRv2JMEYp3qoVnxl5b
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  junifer/external/nilearn/junifer_nifti_spheres_masker.py,sha256=DbSK2hKrgpHZ_vCRLbVv3YJpLZNkEAG0HFfQQpG6zdU,16546
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  junifer/markers/__init__.py,sha256=u4BFgS_3GXAwFN2HfqdAhlBkyenLw4IYlMlwXwnjkVQ,1235
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- junifer/markers/base.py,sha256=7_TLrz8dZH_3t1zgSSW2yCnDO2DGGAxFMZLHDkvJ_NM,6985
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- junifer/markers/brainprint.py,sha256=ztAjTaarQKm5TacirEQNcL4G00dm71uZF5S6S4vDvsI,21818
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+ junifer/markers/base.py,sha256=__Z0owDdjTwb7alQneOeoaUqaeCVbHwFRnaRZERi37M,8364
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+ junifer/markers/brainprint.py,sha256=Y5tcEKOSWNLdOTrxn72UzHpFplmYuo4xOmugGpSPhaE,15115
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- junifer/markers/ets_rss.py,sha256=gyy8BPPSEhM1fWh0aQqzjxLihTslnXhKqyJcdhZQsdA,4586
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- junifer/markers/parcel_aggregation.py,sha256=QaPqweCocO_dsC4rHyl-lWwDaXrqCzrsK5g32zjbsZU,8748
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- junifer/markers/sphere_aggregation.py,sha256=zgLcFhpu_bJJiMAVA_UGOUvMC5ZsmuDMcHr-MsIg6-U,8309
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+ junifer/markers/ets_rss.py,sha256=4b1rUIMt4RISNSMQqATJadYheyT-YOnadWZDwGsFELk,4273
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+ junifer/markers/parcel_aggregation.py,sha256=WKS_GILu80JF6IMK0BsHLvq7NefqlHt6u37b2lOx7_Q,8349
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+ junifer/markers/sphere_aggregation.py,sha256=E_f6bEf_EzuK1WDreO1Hstsp2hXTwaVBysbVX9gnX2Y,7910
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- junifer/markers/complexity/complexity_base.py,sha256=Ugh0nc9yPUx0G3PVqcV5W-fq2uVyV4cNj9y-Eq0bd7U,4436
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+ junifer/markers/complexity/complexity_base.py,sha256=_JIqrglcPG8lEzCdM27o0KLOyLcncebk_YVBq_-pPak,4165
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@@ -153,68 +154,68 @@ junifer/markers/complexity/range_entropy_auc.py,sha256=PuuyluXhzghPY66er-bWIlDME
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- junifer/markers/complexity/tests/test_perm_entropy.py,sha256=S_ULYV7uwxbrKiUlF5MLhl5Kq_Wp43vNGtXHxHbJqAI,2251
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- junifer/markers/falff/falff_parcels.py,sha256=G3ZVD7_SdJvrLy7Nyl-qypm0SFxa55PFJWIvQORCJoc,5040
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- junifer/markers/falff/falff_spheres.py,sha256=JBhNJlDS7T4Jy-jXisvJ6FcraBVH_4SJgTl7N3aQyiA,5571
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- junifer/markers/falff/tests/test_falff_parcels.py,sha256=xvEJ9PPjvOfsmyYyEAiycj_35EOivEkLue5yPHSptCs,4009
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- junifer/markers/falff/tests/test_falff_spheres.py,sha256=E-Hsny-iH34TmWIMXEmq6j-q0qNpAYv-cwnxZDeMnlg,4040
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+ junifer/markers/falff/falff_base.py,sha256=1VjEZMd7BpXDc2subm0VzZNxFp6uxMb9QjBmMC6tDVg,4903
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+ junifer/markers/falff/falff_parcels.py,sha256=raciVfTA8GDfftqnraWVyRsaSsNiz82K1bJkVq9fmME,6046
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+ junifer/markers/falff/tests/test_falff_parcels.py,sha256=Z3n1i8dkYbdXgouUjfIif9yLv5MubBEdrtAA-a6kRcc,4349
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+ junifer/markers/temporal_snr/tests/test_temporal_snr_parcels.py,sha256=JnsLIF0qT4L3JfSIBeHxFsugQ89P9by0CmNwNJiFnZY,2042
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+ junifer/markers/tests/test_brainprint.py,sha256=fjwGQZk0Or0VUaMxcOr8i_onXRInfspcm3wD_qjqxDs,1588
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+ junifer/markers/tests/test_markers_base.py,sha256=XYe1Z_88h2g1WX6Em4aM8VMyBuCpy5sNHbbpC0I89m4,2979
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+ junifer/markers/tests/test_parcel_aggregation.py,sha256=FkB0O0HjTk1CnLOn-dzNs_9_byUOISRc4jV92shN2Kc,27655
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+ junifer/markers/tests/test_sphere_aggregation.py,sha256=TGn5S7zKK0SJ4nHIxRZQSCpqRBmz7c8Sb8C79dLoHjE,10611
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+ junifer/pipeline/pipeline_step_mixin.py,sha256=wakimkG8GC0PWkFHMHIfgzM2yak41xLrzbVRH0oe8D4,7613
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- junifer/pipeline/tests/test_registry.py,sha256=rYN0pO3gSueQ6XsasEM9VU5BkLyaNl8WaCZiaO8Rno0,4105
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+ junifer/pipeline/tests/test_registry.py,sha256=APC8PNmA3zJnMjLz90rZw_wK0hoag6St8AmQY6MUEqA,4121
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@@ -263,10 +264,10 @@ junifer/utils/logging.py,sha256=T9gzk7l1O-dmRiZJHggVDkQGzup_P2_FV3xsaoq0BmI,9369
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- junifer-0.0.5.dev180.dist-info/AUTHORS.rst,sha256=rmULKpchpSol4ExWFdm-qu4fkpSZPYqIESVJBZtGb6E,163
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- junifer-0.0.5.dev180.dist-info/LICENSE.md,sha256=MqCnOBu8uXsEOzRZWh9EBVfVz-kE9NkXcLCrtGXo2yU,34354
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- junifer-0.0.5.dev180.dist-info/METADATA,sha256=Sl8jNa8ncy1reirlZDX0UyuaRj535lOwr9vLJhS-2U8,8280
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- junifer-0.0.5.dev180.dist-info/WHEEL,sha256=cpQTJ5IWu9CdaPViMhC9YzF8gZuS5-vlfoFihTBC86A,91
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- junifer-0.0.5.dev180.dist-info/entry_points.txt,sha256=DxFvKq0pOqRunAK0FxwJcoDfV1-dZvsFDpD5HRqSDhw,48
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- junifer-0.0.5.dev180.dist-info/top_level.txt,sha256=4bAq1R2QFQ4b3hohjys2JBvxrl0GKk5LNFzYvz9VGcA,8
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- junifer-0.0.5.dev180.dist-info/RECORD,,
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+ junifer-0.0.5.dev202.dist-info/AUTHORS.rst,sha256=rmULKpchpSol4ExWFdm-qu4fkpSZPYqIESVJBZtGb6E,163
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+ junifer-0.0.5.dev202.dist-info/LICENSE.md,sha256=MqCnOBu8uXsEOzRZWh9EBVfVz-kE9NkXcLCrtGXo2yU,34354
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+ junifer-0.0.5.dev202.dist-info/METADATA,sha256=rNyDVjXQJfmRqzgtC3lCiethP48HRampY0u24hWzfD0,8280
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+ junifer-0.0.5.dev202.dist-info/WHEEL,sha256=FZ75kcLy9M91ncbIgG8dnpCncbiKXSRGJ_PFILs6SFg,91
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+ junifer-0.0.5.dev202.dist-info/entry_points.txt,sha256=DxFvKq0pOqRunAK0FxwJcoDfV1-dZvsFDpD5HRqSDhw,48
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+ junifer-0.0.5.dev202.dist-info/top_level.txt,sha256=4bAq1R2QFQ4b3hohjys2JBvxrl0GKk5LNFzYvz9VGcA,8
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+ junifer-0.0.5.dev202.dist-info/RECORD,,
@@ -1,5 +1,5 @@
1
1
  Wheel-Version: 1.0
2
- Generator: setuptools (70.1.0)
2
+ Generator: setuptools (71.0.1)
3
3
  Root-Is-Purelib: true
4
4
  Tag: py3-none-any
5
5