junifer 0.0.5.dev164__py3-none-any.whl → 0.0.5.dev180__py3-none-any.whl

junifer/_version.py

@@ -12,5 +12,5 @@ __version__: str
 __version_tuple__: VERSION_TUPLE
 version_tuple: VERSION_TUPLE
 
-__version__ = version = '0.0.5.dev164'
-__version_tuple__ = version_tuple = (0, 0, 5, 'dev164')
+__version__ = version = '0.0.5.dev180'
+__version_tuple__ = version_tuple = (0, 0, 5, 'dev180')

junifer/api/tests/test_api_utils.py

@@ -4,6 +4,7 @@
 # License: AGPL
 
 import platform as pl
+import sys
 
 import pytest
 
@@ -49,8 +50,7 @@ def test_get_dependency_information_short() -> None:
         "looseversion",
     ]
 
-    python_minor_version = int(pl.python_version_tuple()[1])
-    if python_minor_version < 10:
+    if sys.version_info < (3, 11):
         dependency_list.append("importlib_metadata")
 
     assert frozenset(dependency_information.keys()) == frozenset(

junifer/markers/brainprint.py

@@ -3,10 +3,13 @@
 # Authors: Synchon Mandal <s.mandal@fz-juelich.de>
 # License: AGPL
 
-try:
-    from importlib.metadata import packages_distributions
-except ImportError:  # pragma: no cover
+import sys
+
+
+if sys.version_info < (3, 11):  # pragma: no cover
     from importlib_metadata import packages_distributions
+else:
+    from importlib.metadata import packages_distributions
 
 import uuid
 from copy import deepcopy

junifer/markers/falff/_afni_falff.py

@@ -124,7 +124,7 @@ class AFNIALFF:
         convert_alff_cmd = [
             "3dAFNItoNIFTI",
             f"-prefix {alff_afni_to_nifti_out_path.resolve()}",
-            f"{alff_falff_out_path_prefix}_ALFF+tlrc.BRIK",
+            f"{alff_falff_out_path_prefix}_ALFF+orig.BRIK",
         ]
         # Call 3dAFNItoNIFTI
         run_ext_cmd(name="3dAFNItoNIFTI", cmd=convert_alff_cmd)
@@ -136,7 +136,7 @@ class AFNIALFF:
         convert_falff_cmd = [
             "3dAFNItoNIFTI",
             f"-prefix {falff_afni_to_nifti_out_path.resolve()}",
-            f"{alff_falff_out_path_prefix}_fALFF+tlrc.BRIK",
+            f"{alff_falff_out_path_prefix}_fALFF+orig.BRIK",
         ]
         # Call 3dAFNItoNIFTI
         run_ext_cmd(name="3dAFNItoNIFTI", cmd=convert_falff_cmd)

junifer/markers/reho/_afni_reho.py

@@ -181,7 +181,7 @@ class AFNIReHo:
         convert_cmd = [
             "3dAFNItoNIFTI",
             f"-prefix {reho_afni_to_nifti_out_path.resolve()}",
-            f"{reho_out_path_prefix}+tlrc.BRIK",
+            f"{reho_out_path_prefix}+orig.BRIK",
         ]
         # Call 3dAFNItoNIFTI
         run_ext_cmd(name="3dAFNItoNIFTI", cmd=convert_cmd)

junifer/pipeline/pipeline_step_mixin.py

@@ -4,10 +4,14 @@
 #          Synchon Mandal <s.mandal@fz-juelich.de>
 # License: AGPL
 
-try:
-    from importlib.metadata import packages_distributions
-except ImportError:  # pragma: no cover
+import sys
+
+
+if sys.version_info < (3, 11):  # pragma: no cover
     from importlib_metadata import packages_distributions
+else:
+    from importlib.metadata import packages_distributions
+
 
 from importlib.util import find_spec
 from itertools import chain

junifer/preprocess/smoothing/_afni_smoothing.py

@@ -105,7 +105,7 @@ class AFNISmoothing:
         convert_cmd = [
             "3dAFNItoNIFTI",
             f"-prefix {blur_afni_to_nifti_out_path.resolve()}",
-            f"{blur_out_path_prefix}+tlrc.BRIK",
+            f"{blur_out_path_prefix}+orig.BRIK",
         ]
         # Call 3dAFNItoNIFTI
         run_ext_cmd(name="3dAFNItoNIFTI", cmd=convert_cmd)

junifer/utils/logging.py

@@ -4,13 +4,15 @@
 #          Synchon Mandal <s.mandal@fz-juelich.de>
 # License: AGPL
 
-try:
+import sys
+
+
+if sys.version_info < (3, 12):
     from distutils.version import LooseVersion
-except ImportError:  # pragma: no cover
+else:  # pragma: no cover
     from looseversion import LooseVersion
 
 import logging
-import sys
 from pathlib import Path
 from subprocess import PIPE, Popen, TimeoutExpired
 from typing import Dict, NoReturn, Optional, Type, Union

{junifer-0.0.5.dev164.dist-info → junifer-0.0.5.dev180.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: junifer
-Version: 0.0.5.dev164
+Version: 0.0.5.dev180
 Summary: JUelich NeuroImaging FEature extractoR
 Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
 Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
@@ -42,7 +42,7 @@ Requires-Dist: httpx[http2] ==0.26.0
 Requires-Dist: tqdm ==4.66.1
 Requires-Dist: templateflow >=23.0.0
 Requires-Dist: lapy <2.0.0,>=1.0.0
-Requires-Dist: importlib-metadata ; python_version < "3.10"
+Requires-Dist: importlib-metadata ; python_version < "3.9"
 Requires-Dist: looseversion ==1.3.0 ; python_version >= "3.12"
 Provides-Extra: all
 Requires-Dist: bctpy ==0.6.0 ; extra == 'all'

{junifer-0.0.5.dev164.dist-info → junifer-0.0.5.dev180.dist-info}/RECORD

@@ -1,5 +1,5 @@
 junifer/__init__.py,sha256=-T9XmiCCL0j3YLx-0Pph15sPfL5FlcBDscajjJ-V4sU,604
-junifer/_version.py,sha256=4TzTXrNmuKyQiupJkRHw9Go6vXmUVFfKvZmqI576RN0,428
+junifer/_version.py,sha256=qo4yop6ut9LFgev0EsENpBz5BZ_dUgwq-jzypAN6ccM,428
 junifer/stats.py,sha256=BjQb2lfTGDP9l4UuQYmJFcJJNRfbJDGlNvC06SJaDDE,6237
 junifer/api/__init__.py,sha256=lwyIF0hPc7fICuSoddJfay0LPqlTRxHJ_xbtizgFYZA,312
 junifer/api/cli.py,sha256=53pews3mXkJ7DUDSkV51PbitYnuVAdQRkWG-gjO08Uw,16142
@@ -36,7 +36,7 @@ junifer/api/res/fsl/flirt,sha256=tSjiUco8ui8AbHD7mTzChEwbR0Rf_4iJTgzYTPF_WuQ,42
 junifer/api/res/fsl/img2imgcoord,sha256=Zmaw3oJYrEltcXiPyEubXry9ppAq3SND52tdDWGgeZk,49
 junifer/api/res/fsl/run_fsl_docker.sh,sha256=pq-fcNdLuvHzVIQePN4GebZGlcE2UF-xj5rBIqAMz4g,1122
 junifer/api/res/fsl/std2imgcoord,sha256=-X5wRH6XMl0yqnTACJX6MFhO8DFOEWg42MHRxGvimXg,49
-junifer/api/tests/test_api_utils.py,sha256=j_QLYRofctz3GP6_Zbz_ABpdiuXWAK9ue_AzP7Rxuu4,2745
+junifer/api/tests/test_api_utils.py,sha256=aM4cCMf3orGURlXTcjBk0TVV0TF9yuFr4biH7eDG0F8,2696
 junifer/api/tests/test_cli.py,sha256=kyDu-51lBmIBlQ2MnmmecC3nENrQuZRpk0bCkAPqmWM,10969
 junifer/api/tests/test_functions.py,sha256=unLxIMwB3f7HF3ESq0JCfRaQhNB9Xj0JEi1OMkWsgtQ,17753
 junifer/api/tests/test_parser.py,sha256=eUz2JPVb0_cxvoeI1O_C5PMNs5v_lDzGsN6fV1VW5Eg,6109
@@ -137,7 +137,7 @@ junifer/external/nilearn/junifer_nifti_spheres_masker.py,sha256=DbSK2hKrgpHZ_vCR
 junifer/external/nilearn/tests/test_junifer_nifti_spheres_masker.py,sha256=zpvBYIvaNjUj9fIUg5K78LRzJqbyMYlUo2UQYS9_lo4,12275
 junifer/markers/__init__.py,sha256=u4BFgS_3GXAwFN2HfqdAhlBkyenLw4IYlMlwXwnjkVQ,1235
 junifer/markers/base.py,sha256=7_TLrz8dZH_3t1zgSSW2yCnDO2DGGAxFMZLHDkvJ_NM,6985
-junifer/markers/brainprint.py,sha256=On1M8Hp14g-S-o-3TVVYTGfviJEz-xjuAVg0mRHyxFg,21793
+junifer/markers/brainprint.py,sha256=ztAjTaarQKm5TacirEQNcL4G00dm71uZF5S6S4vDvsI,21818
 junifer/markers/collection.py,sha256=13nccLKJp2nMs07hLpvcSYlvfj_L1fntmFrYeAE2jLM,5544
 junifer/markers/ets_rss.py,sha256=gyy8BPPSEhM1fWh0aQqzjxLihTslnXhKqyJcdhZQsdA,4586
 junifer/markers/parcel_aggregation.py,sha256=QaPqweCocO_dsC4rHyl-lWwDaXrqCzrsK5g32zjbsZU,8748
@@ -161,7 +161,7 @@ junifer/markers/complexity/tests/test_range_entropy_auc.py,sha256=G6kpmAfYUKid9B
 junifer/markers/complexity/tests/test_sample_entropy.py,sha256=tgx4dN88CwxkrkCHFFRN9204fdK19l2mHmIjQZ0mq6E,2262
 junifer/markers/complexity/tests/test_weighted_perm_entropy.py,sha256=z7BFk5LIZCEbMNPqR9IWqhhOfJ7yIsK71Thylg08Xx0,2325
 junifer/markers/falff/__init__.py,sha256=qGr8HFhTnwTMWGTf96nRLYZgIXYmf4DLLIcsMiS62p0,240
-junifer/markers/falff/_afni_falff.py,sha256=UZSclcN2F-fEuDnrPUMXfUBOBnNdH0etvcPOMoig-W8,4521
+junifer/markers/falff/_afni_falff.py,sha256=QNi_4MU4_sfnfXedrYHT-kn17KCDE6a7ELfSGmRZPmA,4521
 junifer/markers/falff/_junifer_falff.py,sha256=Datf23VxbiD6ZiC-3tANN9MMVHuZKzQx04nX1GXA25c,4417
 junifer/markers/falff/falff_base.py,sha256=XXnL-voEjWgLLq9ueX_SJcIwKGAZPxIpdEhpuq8cNuo,5723
 junifer/markers/falff/falff_parcels.py,sha256=G3ZVD7_SdJvrLy7Nyl-qypm0SFxa55PFJWIvQORCJoc,5040
@@ -182,7 +182,7 @@ junifer/markers/functional_connectivity/tests/test_functional_connectivity_base.
 junifer/markers/functional_connectivity/tests/test_functional_connectivity_parcels.py,sha256=iV1HY2t0ywBjOn06SLBlfn3x2c3Yuopq8W4pPQyfdzQ,3096
 junifer/markers/functional_connectivity/tests/test_functional_connectivity_spheres.py,sha256=wMK5GVcRz68zsCPMtTXxoG7H68Ab8wk9_bsrcyRz1R4,5090
 junifer/markers/reho/__init__.py,sha256=_6WkTQcg0ksZguSQGi1XuoMKuGwYs5tvDLVZ1h6xB5E,232
-junifer/markers/reho/_afni_reho.py,sha256=eMEAJXW8Pgiid9Ijmc0Rf4cE9BmRxRmLyFkhifWx8ls,6469
+junifer/markers/reho/_afni_reho.py,sha256=iaZFPJbyB9-QQAZ5-kKxwN0APB5MH85pOAChq-JFLNI,6469
 junifer/markers/reho/_junifer_reho.py,sha256=7-jD28YQQWb3dfT6SxyYfGugFSq8wi7_2hUA-ryiGAo,9307
 junifer/markers/reho/reho_base.py,sha256=HQ75f5qQ8RL10BpzNiHWmo7AwM7L58gs5sAPZLP8hfc,4516
 junifer/markers/reho/reho_parcels.py,sha256=tqAl7_X0mQZ-ipQtC9qiV5vz_dh76z3mdfjBSQx4vYg,6170
@@ -207,7 +207,7 @@ junifer/onthefly/__init__.py,sha256=WykjD_q_zWyX40Y5iKsFXhPJLzD1NPcN-XKFKZDMXfc,
 junifer/onthefly/read_transform.py,sha256=kZ-N_fKe9glaBTjhj_HXrdTtWXGI-fMoBpsawcOgsTw,4340
 junifer/onthefly/tests/test_read_transform.py,sha256=D2C3IpXQHdsJSF07v8rEwGntLGXjZOserlRhebJUAVM,4719
 junifer/pipeline/__init__.py,sha256=mmhtYuRGetBmBvKPVb9MxklcEK_R9ly-dgkzQiOp3g8,363
-junifer/pipeline/pipeline_step_mixin.py,sha256=Zry02iJUg47gECXaZe_89xwW1coH7Q0-1bwiMOghZfo,7253
+junifer/pipeline/pipeline_step_mixin.py,sha256=VABcgFgXoBvo_rCzCmWyGZgtfDTPA50NzYiVqbE2MZI,7279
 junifer/pipeline/registry.py,sha256=UDByAvfWjTImUVrI7d9Ol2C7_s287-mSjtj8lMvhIck,4325
 junifer/pipeline/singleton.py,sha256=c5U8Xn10MQqaXjlLzxLbw3AmSYW6aTw_iSL0rDkbuMU,1011
 junifer/pipeline/update_meta_mixin.py,sha256=A_gYCPqdPlM0Xpum9TjJowb41O7ntxQg6y4YOgYeyy4,1564
@@ -223,7 +223,7 @@ junifer/preprocess/confounds/__init__.py,sha256=LvgaRJz1-JtkaPoLZHUYlwJX5Hs1tm4E
 junifer/preprocess/confounds/fmriprep_confound_remover.py,sha256=g5thIiva1XAP_zkKMV0_CydLtkRUGokBxmQ1GdXCroc,20151
 junifer/preprocess/confounds/tests/test_fmriprep_confound_remover.py,sha256=xN9tPkktuRHQtmY1UOP0H_sXT7LXPY282kMgYkoQTFE,19973
 junifer/preprocess/smoothing/__init__.py,sha256=M-402qVDu_AZH0HadPb6kPOla9kpI0Mz5rBwx-pOh5Y,177
-junifer/preprocess/smoothing/_afni_smoothing.py,sha256=FLJIrlYGxMT8rJdhV3LjALFIC9EPp902OuXt0FqAA_s,3266
+junifer/preprocess/smoothing/_afni_smoothing.py,sha256=Ta5FJ_IP14AjIv76f_Qck0D53gRh20amwXF-h7nWK9A,3266
 junifer/preprocess/smoothing/_fsl_smoothing.py,sha256=ZBdP4VsaQEYD9JYUitAXSccwvP3GZ0FyqhriV8gJxyk,3035
 junifer/preprocess/smoothing/_nilearn_smoothing.py,sha256=bshMj2DKEFkNiUbpaBoBfFFI6O80FIN49Oa3nc6FgaA,1928
 junifer/preprocess/smoothing/smoothing.py,sha256=Bb9_0wvt1CfwzpxN_svPiQ2euOZkAT9S--4qr8omhyQ,5355
@@ -259,14 +259,14 @@ junifer/tests/test_stats.py,sha256=3vPMgYYpWxk8ECDFOMm3-dFBlh4XxjL83SwRBSBAHok,4
 junifer/utils/__init__.py,sha256=V1-1FKPhACiS2nUr8TTgQFq7irEnp2an5YdIU3Zz7RY,439
 junifer/utils/fs.py,sha256=M3CKBLh4gPS6s9giyopgb1hHMXzLb6k3cung2wHVBjs,492
 junifer/utils/helpers.py,sha256=uEdZ3wCgvbWwp1v0DdxIbaV8qORmNSoJIaWmb9haKh0,1366
-junifer/utils/logging.py,sha256=b02qVTdE-WNVo6uxCYdIHVmNfM7An0NdCJNq_2Gte8o,9355
+junifer/utils/logging.py,sha256=T9gzk7l1O-dmRiZJHggVDkQGzup_P2_FV3xsaoq0BmI,9369
 junifer/utils/tests/test_fs.py,sha256=WQS7cKlKEZ742CIuiOYYpueeAhY9PqlastfDVpVVtvE,923
 junifer/utils/tests/test_helpers.py,sha256=k5qqfxK8dFyuewTJyR1Qn6-nFaYNuVr0ysc18bfPjyU,929
 junifer/utils/tests/test_logging.py,sha256=l8oo-AiBV7H6_IzlsNcj__cLeZBUvgIGoaMszD9VaJg,7754
-junifer-0.0.5.dev164.dist-info/AUTHORS.rst,sha256=rmULKpchpSol4ExWFdm-qu4fkpSZPYqIESVJBZtGb6E,163
-junifer-0.0.5.dev164.dist-info/LICENSE.md,sha256=MqCnOBu8uXsEOzRZWh9EBVfVz-kE9NkXcLCrtGXo2yU,34354
-junifer-0.0.5.dev164.dist-info/METADATA,sha256=sX7kmrzK5LL1__lYSwxiPFX1vay15MVNi59I7tOg8KE,8281
-junifer-0.0.5.dev164.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
-junifer-0.0.5.dev164.dist-info/entry_points.txt,sha256=DxFvKq0pOqRunAK0FxwJcoDfV1-dZvsFDpD5HRqSDhw,48
-junifer-0.0.5.dev164.dist-info/top_level.txt,sha256=4bAq1R2QFQ4b3hohjys2JBvxrl0GKk5LNFzYvz9VGcA,8
-junifer-0.0.5.dev164.dist-info/RECORD,,
+junifer-0.0.5.dev180.dist-info/AUTHORS.rst,sha256=rmULKpchpSol4ExWFdm-qu4fkpSZPYqIESVJBZtGb6E,163
+junifer-0.0.5.dev180.dist-info/LICENSE.md,sha256=MqCnOBu8uXsEOzRZWh9EBVfVz-kE9NkXcLCrtGXo2yU,34354
+junifer-0.0.5.dev180.dist-info/METADATA,sha256=Sl8jNa8ncy1reirlZDX0UyuaRj535lOwr9vLJhS-2U8,8280
+junifer-0.0.5.dev180.dist-info/WHEEL,sha256=cpQTJ5IWu9CdaPViMhC9YzF8gZuS5-vlfoFihTBC86A,91
+junifer-0.0.5.dev180.dist-info/entry_points.txt,sha256=DxFvKq0pOqRunAK0FxwJcoDfV1-dZvsFDpD5HRqSDhw,48
+junifer-0.0.5.dev180.dist-info/top_level.txt,sha256=4bAq1R2QFQ4b3hohjys2JBvxrl0GKk5LNFzYvz9VGcA,8
+junifer-0.0.5.dev180.dist-info/RECORD,,

{junifer-0.0.5.dev164.dist-info → junifer-0.0.5.dev180.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.43.0)
+Generator: setuptools (70.1.0)
 Root-Is-Purelib: true
 Tag: py3-none-any