junifer 0.0.5.dev110__py3-none-any.whl → 0.0.5.dev145__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- junifer/__init__.py +17 -0
- junifer/_version.py +2 -2
- junifer/api/__init__.py +3 -0
- junifer/api/decorators.py +9 -0
- junifer/api/functions.py +7 -4
- junifer/api/parser.py +3 -0
- junifer/api/queue_context/__init__.py +3 -0
- junifer/api/res/afni/run_afni_docker.sh +1 -1
- junifer/api/res/ants/run_ants_docker.sh +1 -1
- junifer/api/res/fsl/run_fsl_docker.sh +1 -1
- junifer/api/tests/test_api_utils.py +2 -0
- junifer/configs/juseless/__init__.py +3 -0
- junifer/configs/juseless/datagrabbers/__init__.py +9 -0
- junifer/configs/juseless/datagrabbers/aomic_id1000_vbm.py +3 -0
- junifer/configs/juseless/datagrabbers/camcan_vbm.py +3 -0
- junifer/configs/juseless/datagrabbers/ixi_vbm.py +3 -0
- junifer/configs/juseless/datagrabbers/ucla.py +3 -0
- junifer/configs/juseless/datagrabbers/ukb_vbm.py +3 -0
- junifer/data/__init__.py +20 -0
- junifer/data/coordinates.py +8 -0
- junifer/data/masks.py +10 -0
- junifer/data/parcellations.py +9 -0
- junifer/data/template_spaces.py +3 -0
- junifer/data/tests/test_masks.py +1 -1
- junifer/data/utils.py +3 -0
- junifer/datagrabber/__init__.py +15 -0
- junifer/datagrabber/aomic/__init__.py +3 -0
- junifer/datagrabber/aomic/id1000.py +3 -0
- junifer/datagrabber/aomic/piop1.py +3 -0
- junifer/datagrabber/aomic/piop2.py +3 -0
- junifer/datagrabber/base.py +3 -0
- junifer/datagrabber/datalad_base.py +3 -0
- junifer/datagrabber/hcp1200/__init__.py +3 -0
- junifer/datagrabber/hcp1200/datalad_hcp1200.py +3 -0
- junifer/datagrabber/hcp1200/hcp1200.py +3 -0
- junifer/datagrabber/multiple.py +3 -0
- junifer/datagrabber/pattern.py +5 -1
- junifer/datagrabber/pattern_datalad.py +3 -0
- junifer/datagrabber/utils.py +3 -0
- junifer/datareader/__init__.py +3 -0
- junifer/datareader/default.py +3 -0
- junifer/external/BrainPrint/brainprint/__init__.py +4 -0
- junifer/external/BrainPrint/brainprint/_version.py +3 -0
- junifer/external/BrainPrint/brainprint/asymmetry.py +91 -0
- junifer/external/BrainPrint/brainprint/brainprint.py +441 -0
- junifer/external/BrainPrint/brainprint/surfaces.py +258 -0
- junifer/external/BrainPrint/brainprint/utils/__init__.py +1 -0
- junifer/external/BrainPrint/brainprint/utils/_config.py +112 -0
- junifer/external/BrainPrint/brainprint/utils/utils.py +188 -0
- junifer/markers/__init__.py +22 -0
- junifer/markers/base.py +21 -7
- junifer/markers/brainprint.py +665 -0
- junifer/markers/collection.py +3 -0
- junifer/markers/complexity/__init__.py +10 -0
- junifer/markers/complexity/complexity_base.py +3 -0
- junifer/markers/complexity/hurst_exponent.py +3 -0
- junifer/markers/complexity/multiscale_entropy_auc.py +3 -0
- junifer/markers/complexity/perm_entropy.py +3 -0
- junifer/markers/complexity/range_entropy.py +3 -0
- junifer/markers/complexity/range_entropy_auc.py +3 -0
- junifer/markers/complexity/sample_entropy.py +3 -0
- junifer/markers/complexity/tests/test_hurst_exponent.py +7 -0
- junifer/markers/complexity/tests/test_multiscale_entropy_auc.py +7 -0
- junifer/markers/complexity/tests/test_perm_entropy.py +7 -0
- junifer/markers/complexity/tests/test_range_entropy.py +7 -0
- junifer/markers/complexity/tests/test_range_entropy_auc.py +7 -0
- junifer/markers/complexity/tests/test_sample_entropy.py +7 -0
- junifer/markers/complexity/tests/test_weighted_perm_entropy.py +7 -0
- junifer/markers/complexity/weighted_perm_entropy.py +3 -0
- junifer/markers/ets_rss.py +3 -0
- junifer/markers/falff/__init__.py +3 -0
- junifer/markers/falff/_afni_falff.py +3 -0
- junifer/markers/falff/_junifer_falff.py +3 -0
- junifer/markers/falff/falff_base.py +3 -0
- junifer/markers/falff/falff_parcels.py +3 -0
- junifer/markers/falff/falff_spheres.py +3 -0
- junifer/markers/functional_connectivity/__init__.py +9 -0
- junifer/markers/functional_connectivity/crossparcellation_functional_connectivity.py +3 -0
- junifer/markers/functional_connectivity/edge_functional_connectivity_parcels.py +3 -0
- junifer/markers/functional_connectivity/edge_functional_connectivity_spheres.py +3 -0
- junifer/markers/functional_connectivity/functional_connectivity_base.py +3 -0
- junifer/markers/functional_connectivity/functional_connectivity_parcels.py +3 -0
- junifer/markers/functional_connectivity/functional_connectivity_spheres.py +3 -0
- junifer/markers/parcel_aggregation.py +3 -0
- junifer/markers/reho/__init__.py +3 -0
- junifer/markers/reho/_afni_reho.py +4 -1
- junifer/markers/reho/_junifer_reho.py +4 -1
- junifer/markers/reho/reho_base.py +2 -0
- junifer/markers/reho/reho_parcels.py +5 -2
- junifer/markers/reho/reho_spheres.py +5 -2
- junifer/markers/sphere_aggregation.py +3 -0
- junifer/markers/temporal_snr/__init__.py +3 -0
- junifer/markers/temporal_snr/temporal_snr_base.py +3 -0
- junifer/markers/temporal_snr/temporal_snr_parcels.py +3 -0
- junifer/markers/temporal_snr/temporal_snr_spheres.py +3 -0
- junifer/markers/tests/test_brainprint.py +47 -0
- junifer/onthefly/__init__.py +3 -0
- junifer/onthefly/read_transform.py +3 -0
- junifer/pipeline/__init__.py +8 -0
- junifer/pipeline/pipeline_step_mixin.py +3 -0
- junifer/pipeline/registry.py +3 -0
- junifer/pipeline/singleton.py +3 -0
- junifer/pipeline/update_meta_mixin.py +3 -0
- junifer/pipeline/utils.py +3 -0
- junifer/pipeline/workdir_manager.py +3 -0
- junifer/preprocess/__init__.py +8 -0
- junifer/preprocess/base.py +4 -1
- junifer/preprocess/confounds/__init__.py +3 -0
- junifer/preprocess/confounds/fmriprep_confound_remover.py +3 -0
- junifer/preprocess/smoothing/__init__.py +3 -0
- junifer/preprocess/warping/__init__.py +3 -0
- junifer/preprocess/warping/_ants_warper.py +3 -0
- junifer/preprocess/warping/_fsl_warper.py +3 -0
- junifer/stats.py +3 -0
- junifer/storage/__init__.py +8 -0
- junifer/storage/base.py +3 -0
- junifer/storage/hdf5.py +3 -0
- junifer/storage/pandas_base.py +3 -0
- junifer/storage/sqlite.py +3 -0
- junifer/storage/utils.py +9 -0
- junifer/testing/__init__.py +3 -0
- junifer/testing/datagrabbers.py +7 -0
- junifer/testing/utils.py +3 -0
- junifer/utils/__init__.py +10 -0
- junifer/utils/fs.py +3 -0
- junifer/utils/helpers.py +3 -0
- junifer/utils/logging.py +10 -0
- {junifer-0.0.5.dev110.dist-info → junifer-0.0.5.dev145.dist-info}/METADATA +2 -1
- {junifer-0.0.5.dev110.dist-info → junifer-0.0.5.dev145.dist-info}/RECORD +134 -124
- {junifer-0.0.5.dev110.dist-info → junifer-0.0.5.dev145.dist-info}/AUTHORS.rst +0 -0
- {junifer-0.0.5.dev110.dist-info → junifer-0.0.5.dev145.dist-info}/LICENSE.md +0 -0
- {junifer-0.0.5.dev110.dist-info → junifer-0.0.5.dev145.dist-info}/WHEEL +0 -0
- {junifer-0.0.5.dev110.dist-info → junifer-0.0.5.dev145.dist-info}/entry_points.txt +0 -0
- {junifer-0.0.5.dev110.dist-info → junifer-0.0.5.dev145.dist-info}/top_level.txt +0 -0
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