junifer 0.0.4.dev422__py3-none-any.whl → 0.0.4.dev425__py3-none-any.whl

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Files changed (9) hide show
  1. junifer/_version.py +2 -2
  2. junifer/data/coordinates.py +4 -3
  3. {junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/METADATA +1 -1
  4. {junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/RECORD +9 -9
  5. {junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/AUTHORS.rst +0 -0
  6. {junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/LICENSE.md +0 -0
  7. {junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/WHEEL +0 -0
  8. {junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/entry_points.txt +0 -0
  9. {junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/top_level.txt +0 -0
junifer/_version.py CHANGED
@@ -12,5 +12,5 @@ __version__: str
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  __version_tuple__: VERSION_TUPLE
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  version_tuple: VERSION_TUPLE
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- __version__ = version = '0.0.4.dev422'
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- __version_tuple__ = version_tuple = (0, 0, 4, 'dev422')
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+ __version__ = version = '0.0.4.dev425'
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+ __version_tuple__ = version_tuple = (0, 0, 4, 'dev425')
junifer/data/coordinates.py CHANGED
@@ -260,11 +260,12 @@ def get_coordinates(
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  std2imgcoord_out_path = element_tempdir / "coordinates_transformed.txt"
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  # Set std2imgcoord command
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  std2imgcoord_cmd = [
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- "std2imgcoord",
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+ "cat",
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+ f"{pretransform_coordinates_path.resolve()}",
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+ "| std2imgcoord",
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  f"-img {target_data['reference_path'].resolve()}",
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  f"-warp {extra_input['Warp']['path'].resolve()}",
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- f"{pretransform_coordinates_path.resolve()}",
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- f"> {std2imgcoord_out_path.resolve()}",
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+ f"- > {std2imgcoord_out_path.resolve()}",
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  ]
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  # Call std2imgcoord
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  std2imgcoord_cmd_str = " ".join(std2imgcoord_cmd)
{junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: junifer
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- Version: 0.0.4.dev422
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+ Version: 0.0.4.dev425
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  Summary: JUelich NeuroImaging FEature extractoR
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  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
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  Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
{junifer-0.0.4.dev422.dist-info → junifer-0.0.4.dev425.dist-info}/RECORD RENAMED
@@ -1,5 +1,5 @@
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  junifer/__init__.py,sha256=x1UR2jUcrUdm2HNl-3Qvyi4UUrU6ms5qm2qcmNY7zZk,391
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- junifer/_version.py,sha256=VbLPpJqcmJrzHXvf0BHgEpdwrb1OfYXv6YQumRhXsiE,428
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+ junifer/_version.py,sha256=p31cczSx2OSKphtDx6E2KUtMOHSLo8bDd0Eg7yeGf58,428
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  junifer/stats.py,sha256=KUX4jJcLWnlE34coet8EkdFypFd-td4Vtpx5LvlomVs,5879
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  junifer/api/__init__.py,sha256=YILu9M7SC0Ri4CVd90fELH2OnK_gvCYAXCoqBNCFE8E,257
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  junifer/api/cli.py,sha256=xScav2mF-Jr8JjVFt8kaHuLpX5l_jVTaQGPgQL3VNvA,12881
@@ -40,7 +40,7 @@ junifer/configs/juseless/datagrabbers/tests/test_ixi_vbm.py,sha256=8jxpNZelXwpJG
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  junifer/configs/juseless/datagrabbers/tests/test_ucla.py,sha256=e-jdvcZ9B0mka6_573JJU_cGwSaUV54U8X_n0UadtJY,3351
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  junifer/configs/juseless/datagrabbers/tests/test_ukb_vbm.py,sha256=b9hjc1mgO--PSRC3id2EzzfE2yWNsuZ2UI47a6sfGZU,1025
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  junifer/data/__init__.py,sha256=oUjOs8_M6fitNb44izxpXf3su1e4pG_vCdjwVYkjZjQ,550
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- junifer/data/coordinates.py,sha256=BVpiz9dkwTKwlAnPE8R44dIUD3gCjd9CZBDJHQR9kCY,10957
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+ junifer/data/coordinates.py,sha256=10bXVy94eZALfqdEbAbHTOuuF0Od9Zn2QbCFjAFSY5M,10980
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  junifer/data/masks.py,sha256=chWSl-vyv5Nsd9GuQzydXPOY3AdhApOJq_42NSKpykQ,16952
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  junifer/data/parcellations.py,sha256=wL8lkAYYvg7NDt160EA8N_xFjK8ZtDwoXYJQHNHwbDU,55805
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  junifer/data/utils.py,sha256=K9quLIoWRmm2QFM8Rdy_5bYsWb_XhL0l5Uq_1Sie0kA,1274
@@ -225,10 +225,10 @@ junifer/utils/fs.py,sha256=Jd9AoV2fIF7pT7KhXsn8T1O1fJ1_SFZgaFuOBAM7DG8,460
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  junifer/utils/logging.py,sha256=4kH8j9X_J2bMdnBJMldVF95C5sURa5UAsLmSgRaD9Ig,9117
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  junifer/utils/tests/test_fs.py,sha256=WQS7cKlKEZ742CIuiOYYpueeAhY9PqlastfDVpVVtvE,923
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  junifer/utils/tests/test_logging.py,sha256=l8oo-AiBV7H6_IzlsNcj__cLeZBUvgIGoaMszD9VaJg,7754
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- junifer-0.0.4.dev422.dist-info/AUTHORS.rst,sha256=rmULKpchpSol4ExWFdm-qu4fkpSZPYqIESVJBZtGb6E,163
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- junifer-0.0.4.dev422.dist-info/LICENSE.md,sha256=MqCnOBu8uXsEOzRZWh9EBVfVz-kE9NkXcLCrtGXo2yU,34354
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- junifer-0.0.4.dev422.dist-info/METADATA,sha256=i9W1FfW71F5HsSe3Fd2gKrlUWMV9MY93mVc-P478nL0,7569
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- junifer-0.0.4.dev422.dist-info/WHEEL,sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM,92
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- junifer-0.0.4.dev422.dist-info/entry_points.txt,sha256=DxFvKq0pOqRunAK0FxwJcoDfV1-dZvsFDpD5HRqSDhw,48
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- junifer-0.0.4.dev422.dist-info/top_level.txt,sha256=4bAq1R2QFQ4b3hohjys2JBvxrl0GKk5LNFzYvz9VGcA,8
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- junifer-0.0.4.dev422.dist-info/RECORD,,
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+ junifer-0.0.4.dev425.dist-info/AUTHORS.rst,sha256=rmULKpchpSol4ExWFdm-qu4fkpSZPYqIESVJBZtGb6E,163
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+ junifer-0.0.4.dev425.dist-info/LICENSE.md,sha256=MqCnOBu8uXsEOzRZWh9EBVfVz-kE9NkXcLCrtGXo2yU,34354
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+ junifer-0.0.4.dev425.dist-info/METADATA,sha256=5u5z14ZMbrIE13ok_UGTzLaL4YQI2CHMOyegn6ifuS4,7569
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+ junifer-0.0.4.dev425.dist-info/WHEEL,sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM,92
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+ junifer-0.0.4.dev425.dist-info/entry_points.txt,sha256=DxFvKq0pOqRunAK0FxwJcoDfV1-dZvsFDpD5HRqSDhw,48
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+ junifer-0.0.4.dev425.dist-info/top_level.txt,sha256=4bAq1R2QFQ4b3hohjys2JBvxrl0GKk5LNFzYvz9VGcA,8
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+ junifer-0.0.4.dev425.dist-info/RECORD,,