iplotx 0.1.0__py3-none-any.whl → 0.2.0__py3-none-any.whl

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Files changed (38) hide show
  1. iplotx/__init__.py +22 -1
  2. iplotx/edge/__init__.py +882 -0
  3. iplotx/edge/arrow.py +220 -10
  4. iplotx/edge/ports.py +42 -0
  5. iplotx/groups.py +79 -41
  6. iplotx/ingest/__init__.py +155 -0
  7. iplotx/ingest/heuristics.py +209 -0
  8. iplotx/ingest/providers/network/igraph.py +96 -0
  9. iplotx/ingest/providers/network/networkx.py +133 -0
  10. iplotx/ingest/providers/tree/biopython.py +105 -0
  11. iplotx/ingest/providers/tree/cogent3.py +112 -0
  12. iplotx/ingest/providers/tree/ete4.py +112 -0
  13. iplotx/ingest/providers/tree/skbio.py +112 -0
  14. iplotx/ingest/typing.py +100 -0
  15. iplotx/label.py +127 -0
  16. iplotx/layout.py +139 -0
  17. iplotx/network.py +156 -375
  18. iplotx/plotting.py +157 -56
  19. iplotx/style.py +379 -0
  20. iplotx/tree.py +285 -0
  21. iplotx/typing.py +33 -38
  22. iplotx/utils/geometry.py +128 -81
  23. iplotx/utils/internal.py +3 -0
  24. iplotx/utils/matplotlib.py +58 -38
  25. iplotx/utils/style.py +1 -0
  26. iplotx/version.py +5 -1
  27. iplotx/vertex.py +250 -55
  28. {iplotx-0.1.0.dist-info → iplotx-0.2.0.dist-info}/METADATA +37 -8
  29. iplotx-0.2.0.dist-info/RECORD +30 -0
  30. iplotx/edge/common.py +0 -47
  31. iplotx/edge/directed.py +0 -149
  32. iplotx/edge/label.py +0 -50
  33. iplotx/edge/undirected.py +0 -447
  34. iplotx/heuristics.py +0 -114
  35. iplotx/importing.py +0 -13
  36. iplotx/styles.py +0 -186
  37. iplotx-0.1.0.dist-info/RECORD +0 -20
  38. {iplotx-0.1.0.dist-info → iplotx-0.2.0.dist-info}/WHEEL +0 -0
iplotx/__init__.py CHANGED
@@ -1,2 +1,23 @@
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+ """
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+ iplotx is a library for interactive plotting of networks and trees in
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+ matplotlib.
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+
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+ It guarantees the visualisation will look exactly the same no matter what
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+ library was used to construct the network.
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+ """
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+
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  from .version import __version__
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- from .plotting import plot
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+ from .plotting import (
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+ network,
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+ tree,
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+ )
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+
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+ # Shortcut to iplotx.plotting.network
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+ plot = network
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+
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+ __all__ = [
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+ "network",
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+ "tree",
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+ "plot",
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+ "__version__",
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+ ]