invenio-vocabularies 9.1.2__py2.py3-none-any.whl

invenio_vocabularies/__init__.py

@@ -0,0 +1,16 @@
+# -*- coding: utf-8 -*-
+#
+# Copyright (C) 2020-2025 CERN.
+# Copyright (C) 2024-2025 Graz University of Technology.
+#
+# Invenio-Vocabularies is free software; you can redistribute it and/or
+# modify it under the terms of the MIT License; see LICENSE file for more
+# details.
+
+"""Invenio module for managing vocabularies."""
+
+from .ext import InvenioVocabularies
+
+__version__ = "9.1.2"
+
+__all__ = ("__version__", "InvenioVocabularies")

invenio_vocabularies/administration/__init__.py

@@ -0,0 +1,10 @@
+# -*- coding: utf-8 -*-
+#
+# Copyright (C) 2024 CERN.
+# Copyright (C) 2024 Uni Münster.
+#
+# Invenio-Vocabularies is free software; you can redistribute it and/or
+# modify it under the terms of the MIT License; see LICENSE file for more
+# details.
+
+"""Invenio administration views module for vocabularies."""

invenio_vocabularies/administration/views/__init__.py

@@ -0,0 +1,10 @@
+# -*- coding: utf-8 -*-
+#
+# Copyright (C) 2020-2024 CERN.
+# Copyright (C) 2024 Uni Münster.
+#
+# Invenio-Vocabularies is free software; you can redistribute it and/or
+# modify it under the terms of the MIT License; see LICENSE file for more
+# details.
+
+"""Invenio administration views module for Vocabularies."""

invenio_vocabularies/administration/views/vocabularies.py

@@ -0,0 +1,43 @@
+# -*- coding: utf-8 -*-
+#
+# Copyright (C) 2020-2024 CERN.
+# Copyright (C) 2024 Uni Münster.
+#
+# Invenio-Vocabularies is free software; you can redistribute it and/or
+# modify it under the terms of the MIT License; see LICENSE file for more
+# details.
+
+"""Vocabularies admin interface."""
+
+from invenio_administration.views.base import AdminResourceListView
+from invenio_i18n import lazy_gettext as _
+
+
+class VocabulariesListView(AdminResourceListView):
+    """Configuration for vocabularies list view."""
+
+    api_endpoint = "/vocabularies/"
+    name = "vocabulary-types"
+    menu_label = _("Vocabulary Types")
+    resource_config = "vocabulary_admin_resource"
+    search_request_headers = {"Accept": "application/json"}
+    title = _("Vocabulary Types")
+    category = _("Site management")
+
+    pid_path = "id"
+    icon = "exchange"
+    template = "invenio_administration/search.html"
+
+    display_search = True
+    display_delete = False
+    display_edit = False
+    display_create = False
+
+    item_field_list = {
+        "id": {"text": _("Name"), "order": 1},
+        "count": {"text": _("Number of entries"), "order": 2},
+    }
+
+    search_config_name = "VOCABULARIES_TYPES_SEARCH"
+    search_facets_config_name = "VOCABULARIES_TYPES_FACETS"
+    search_sort_config_name = "VOCABULARIES_TYPES_SORT_OPTIONS"

invenio_vocabularies/alembic/17c703ce1eb7_create_names_table.py

@@ -0,0 +1,54 @@
+#
+# This file is part of Invenio.
+# Copyright (C) 2021 CERN.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Create names table."""
+
+import sqlalchemy as sa
+import sqlalchemy_utils
+from alembic import op
+from sqlalchemy.dialects import mysql, postgresql
+
+# revision identifiers, used by Alembic.
+revision = "17c703ce1eb7"
+down_revision = "4a9a4fd235f8"
+branch_labels = ()
+depends_on = None
+
+
+def upgrade():
+    """Upgrade database."""
+    op.create_table(
+        "name_metadata",
+        sa.Column(
+            "created",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column(
+            "updated",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column("id", sqlalchemy_utils.types.uuid.UUIDType(), nullable=False),
+        sa.Column(
+            "json",
+            sa.JSON()
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "mysql")
+            .with_variant(
+                postgresql.JSONB(none_as_null=True, astext_type=sa.Text()), "postgresql"
+            )
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "sqlite"),
+            nullable=True,
+        ),
+        sa.Column("version_id", sa.Integer(), nullable=False),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_name_metadata")),
+    )
+
+
+def downgrade():
+    """Downgrade database."""
+    op.drop_table("name_metadata")

invenio_vocabularies/alembic/3ba812d80559_add_internal_name_id.py

@@ -0,0 +1,36 @@
+#
+# This file is part of Invenio.
+# Copyright (C) 2024 CERN.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Add internal name ID."""
+
+import sqlalchemy as sa
+from alembic import op
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "3ba812d80559"
+down_revision = "55a700f897b6"
+branch_labels = ()
+depends_on = None
+
+
+def upgrade():
+    """Upgrade database."""
+    op.add_column(
+        "name_metadata", sa.Column("internal_id", sa.String(length=255), nullable=True)
+    )
+    op.create_unique_constraint(
+        op.f("uq_name_metadata_internal_id"), "name_metadata", ["internal_id"]
+    )
+
+
+def downgrade():
+    """Downgrade database."""
+    op.drop_constraint(
+        op.f("uq_name_metadata_internal_id"), "name_metadata", type_="unique"
+    )
+    op.drop_column("name_metadata", "internal_id")

invenio_vocabularies/alembic/4a9a4fd235f8_create_vocabulary_schemes.py

@@ -0,0 +1,37 @@
+#
+# Copyright (C) 2021 Northwestern University.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Create vocabulary schemes."""
+
+import sqlalchemy as sa
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "4a9a4fd235f8"
+down_revision = "6312f33645c1"
+branch_labels = ()
+depends_on = None
+
+
+def upgrade():
+    """Upgrade database."""
+    op.create_table(
+        "vocabularies_schemes",
+        sa.Column("id", sa.String(255), nullable=False),
+        sa.Column("parent_id", sa.String(255), nullable=False),
+        sa.Column("name", sa.String(255), nullable=True),
+        sa.Column("uri", sa.String(255), nullable=True),
+        sa.PrimaryKeyConstraint(
+            "id", "parent_id", name=op.f("pk_vocabularies_schemes")
+        ),
+    )
+
+
+def downgrade():
+    """Downgrade database."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.drop_table("vocabularies_schemes")
+    # ### end Alembic commands ###

invenio_vocabularies/alembic/4f365fced43f_create_vocabularies_tables.py

@@ -0,0 +1,92 @@
+# -*- coding: utf-8 -*-
+#
+# This file is part of Invenio.
+# Copyright (C) 2021 TU Wien.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Create vocabularies tables."""
+
+import sqlalchemy as sa
+import sqlalchemy_utils
+from alembic import op
+from sqlalchemy.dialects import mysql, postgresql
+
+# revision identifiers, used by Alembic.
+revision = "4f365fced43f"
+down_revision = "8ff82dfb0be8"
+branch_labels = ()
+depends_on = None
+
+
+def upgrade():
+    """Upgrade database."""
+    op.create_table(
+        "subject_metadata",
+        sa.Column(
+            "created",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column(
+            "updated",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column("id", sqlalchemy_utils.types.uuid.UUIDType(), nullable=False),
+        sa.Column(
+            "json",
+            sa.JSON()
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "mysql")
+            .with_variant(
+                postgresql.JSONB(none_as_null=True, astext_type=sa.Text()),
+                "postgresql",
+            )
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "sqlite"),
+            nullable=True,
+        ),
+        sa.Column("version_id", sa.Integer(), nullable=False),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_subject_metadata")),
+    )
+    op.create_table(
+        "vocabularies_metadata",
+        sa.Column(
+            "created",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column(
+            "updated",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column("id", sqlalchemy_utils.types.uuid.UUIDType(), nullable=False),
+        sa.Column(
+            "json",
+            sa.JSON()
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "mysql")
+            .with_variant(
+                postgresql.JSONB(none_as_null=True, astext_type=sa.Text()),
+                "postgresql",
+            )
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "sqlite"),
+            nullable=True,
+        ),
+        sa.Column("version_id", sa.Integer(), nullable=False),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_vocabularies_metadata")),
+    )
+    op.create_table(
+        "vocabularies_types",
+        sa.Column("id", sa.String(255), nullable=False),
+        sa.Column("pid_type", sa.String(255), nullable=True),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_vocabularies_types")),
+        sa.UniqueConstraint("pid_type", name=op.f("uq_vocabularies_types_pid_type")),
+    )
+
+
+def downgrade():
+    """Downgrade database."""
+    op.drop_table("vocabularies_types")
+    op.drop_table("vocabularies_metadata")
+    op.drop_table("subject_metadata")

invenio_vocabularies/alembic/55a700f897b6_add_names_and_afiliations_pid_column.py

@@ -0,0 +1,96 @@
+#
+# This file is part of Invenio.
+# Copyright (C) 2023 CERN.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Add "pid" column to names and affiliations tables."""
+
+import sqlalchemy as sa
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "55a700f897b6"
+down_revision = "e1146238edd3"
+branch_labels = ()
+depends_on = "999c62899c20"
+
+
+pids_table = sa.sql.table(
+    "pidstore_pid",
+    sa.sql.column("pid_type"),
+    sa.sql.column("pid_value"),
+    sa.sql.column("object_uuid"),
+    sa.sql.column("object_type"),
+)
+names_table = sa.sql.table(
+    "name_metadata",
+    sa.sql.column("id"),
+    sa.sql.column("pid"),
+)
+affiliations_table = sa.sql.table(
+    "affiliation_metadata",
+    sa.sql.column("id"),
+    sa.sql.column("pid"),
+)
+
+
+def upgrade():
+    """Upgrade database."""
+    op.add_column(
+        "name_metadata",
+        sa.Column("pid", sa.String(255), nullable=True),
+    )
+    # populate from PIDStore
+    op.execute(
+        names_table.update()
+        .where(
+            names_table.c.id == pids_table.c.object_uuid,
+            pids_table.c.object_type == "rec",
+            pids_table.c.pid_type == "names",
+        )
+        .values(pid=pids_table.c.pid_value)
+    )
+    op.create_unique_constraint(
+        op.f("uq_name_metadata_pid"),
+        "name_metadata",
+        ["pid"],
+    )
+
+    op.add_column(
+        "affiliation_metadata",
+        sa.Column("pid", sa.String(255), nullable=True),
+    )
+    # populate from PIDStore
+    op.execute(
+        affiliations_table.update()
+        .where(
+            affiliations_table.c.id == pids_table.c.object_uuid,
+            pids_table.c.object_type == "rec",
+            pids_table.c.pid_type == "aff",
+        )
+        .values(pid=pids_table.c.pid_value)
+    )
+
+    op.create_unique_constraint(
+        op.f("uq_affiliation_metadata_pid"),
+        "affiliation_metadata",
+        ["pid"],
+    )
+
+
+def downgrade():
+    """Downgrade database."""
+    op.drop_constraint(
+        op.f("uq_name_metadata_pid"),
+        "name_metadata",
+        type_="unique",
+    )
+    op.drop_constraint(
+        op.f("uq_affiliation_metadata_pid"),
+        "affiliation_metadata",
+        type_="unique",
+    )
+    op.drop_column("name_metadata", "pid")
+    op.drop_column("affiliation_metadata", "pid")

invenio_vocabularies/alembic/6312f33645c1_create_affiliations_table.py

@@ -0,0 +1,54 @@
+#
+# This file is part of Invenio.
+# Copyright (C) 2021 CERN.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Create affiliations table."""
+
+import sqlalchemy as sa
+import sqlalchemy_utils
+from alembic import op
+from sqlalchemy.dialects import mysql, postgresql
+
+# revision identifiers, used by Alembic.
+revision = "6312f33645c1"
+down_revision = "4f365fced43f"
+branch_labels = ()
+depends_on = None
+
+
+def upgrade():
+    """Upgrade database."""
+    op.create_table(
+        "affiliation_metadata",
+        sa.Column(
+            "created",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column(
+            "updated",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column("id", sqlalchemy_utils.types.uuid.UUIDType(), nullable=False),
+        sa.Column(
+            "json",
+            sa.JSON()
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "mysql")
+            .with_variant(
+                postgresql.JSONB(none_as_null=True, astext_type=sa.Text()), "postgresql"
+            )
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "sqlite"),
+            nullable=True,
+        ),
+        sa.Column("version_id", sa.Integer(), nullable=False),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_affiliation_metadata")),
+    )
+
+
+def downgrade():
+    """Downgrade database."""
+    op.drop_table("affiliation_metadata")

invenio_vocabularies/alembic/676dd587542d_create_funders_vocabulary_table.py

@@ -0,0 +1,58 @@
+#
+# This file is part of Invenio.
+# Copyright (C) 2022 CERN.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Create funders vocabulary table."""
+
+import sqlalchemy as sa
+import sqlalchemy_utils
+from alembic import op
+from sqlalchemy.dialects import mysql, postgresql
+
+# revision identifiers, used by Alembic.
+revision = "676dd587542d"
+down_revision = "17c703ce1eb7"
+branch_labels = ()
+depends_on = None
+
+
+def upgrade():
+    """Upgrade database."""
+    op.create_table(
+        "funder_metadata",
+        sa.Column(
+            "created",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column(
+            "updated",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column("id", sqlalchemy_utils.types.uuid.UUIDType(), nullable=False),
+        sa.Column(
+            "json",
+            sa.JSON()
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "mysql")
+            .with_variant(
+                postgresql.JSONB(none_as_null=True, astext_type=sa.Text()), "postgresql"
+            )
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "sqlite"),
+            nullable=True,
+        ),
+        sa.Column("version_id", sa.Integer(), nullable=False),
+        sa.Column("pid", sa.String(255), nullable=True),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_funder_metadata")),
+        sa.UniqueConstraint("pid", name=op.f("uq_funder_metadata_pid")),
+    )
+    # ### end Alembic commands ###
+
+
+def downgrade():
+    """Downgrade database."""
+    op.drop_table("funder_metadata")
+    # ### end Alembic commands ###

invenio_vocabularies/alembic/8ff82dfb0be8_create_vocabularies_branch.py

@@ -0,0 +1,28 @@
+# -*- coding: utf-8 -*-
+#
+# This file is part of Invenio.
+# Copyright (C) 2021 TU Wien.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Create vocabularies branch."""
+
+import sqlalchemy as sa
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "8ff82dfb0be8"
+down_revision = None
+branch_labels = ("invenio_vocabularies",)
+depends_on = "dbdbc1b19cf2"
+
+
+def upgrade():
+    """Upgrade database."""
+    pass
+
+
+def downgrade():
+    """Downgrade database."""
+    pass

invenio_vocabularies/alembic/__init__.py

@@ -0,0 +1,9 @@
+# -*- coding: utf-8 -*-
+#
+# Copyright (C) 2020-2021 CERN.
+#
+# Invenio-Vocabularies is free software; you can redistribute it and/or
+# modify it under the terms of the MIT License; see LICENSE file for more
+# details.
+
+"""Alembic migrations."""

invenio_vocabularies/alembic/af2457652217_drop_unique_constraint_from_internal_id.py

@@ -0,0 +1,37 @@
+#
+# This file is part of Invenio.
+# Copyright (C) 2016-2018 CERN.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Drop unique constraint from internal id."""
+
+import sqlalchemy as sa
+from alembic import op
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "af2457652217"
+down_revision = "3ba812d80559"
+branch_labels = ()
+depends_on = None
+
+
+def upgrade():
+    """Upgrade database."""
+    op.drop_constraint("uq_name_metadata_internal_id", "name_metadata", type_="unique")
+    op.create_index(
+        op.f("ix_name_metadata_internal_id"),
+        "name_metadata",
+        ["internal_id"],
+        unique=False,
+    )
+
+
+def downgrade():
+    """Downgrade database."""
+    op.drop_index(op.f("ix_name_metadata_internal_id"), table_name="name_metadata")
+    op.create_unique_constraint(
+        "uq_name_metadata_internal_id", "name_metadata", ["internal_id"]
+    )

invenio_vocabularies/alembic/e1146238edd3_create_awards_table.py

@@ -0,0 +1,56 @@
+#
+# This file is part of Invenio.
+# Copyright (C) 2022 CERN.
+#
+# Invenio is free software; you can redistribute it and/or modify it
+# under the terms of the MIT License; see LICENSE file for more details.
+
+"""Create awards table."""
+
+import sqlalchemy as sa
+import sqlalchemy_utils
+from alembic import op
+from sqlalchemy.dialects import mysql, postgresql
+
+# revision identifiers, used by Alembic.
+revision = "e1146238edd3"
+down_revision = "676dd587542d"
+branch_labels = ()
+depends_on = None
+
+
+def upgrade():
+    """Downgrade database."""
+    op.create_table(
+        "award_metadata",
+        sa.Column(
+            "created",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column(
+            "updated",
+            sa.DateTime().with_variant(mysql.DATETIME(fsp=6), "mysql"),
+            nullable=False,
+        ),
+        sa.Column("id", sqlalchemy_utils.types.uuid.UUIDType(), nullable=False),
+        sa.Column(
+            "json",
+            sa.JSON()
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "mysql")
+            .with_variant(
+                postgresql.JSONB(none_as_null=True, astext_type=sa.Text()), "postgresql"
+            )
+            .with_variant(sqlalchemy_utils.types.json.JSONType(), "sqlite"),
+            nullable=True,
+        ),
+        sa.Column("version_id", sa.Integer(), nullable=False),
+        sa.Column("pid", sa.String(255), nullable=True),
+        sa.PrimaryKeyConstraint("id", name=op.f("pk_award_metadata")),
+        sa.UniqueConstraint("pid", name=op.f("uq_award_metadata_pid")),
+    )
+
+
+def downgrade():
+    """Upgrade database."""
+    op.drop_table("award_metadata")

invenio_vocabularies/assets/semantic-ui/js/invenio_vocabularies/.eslintrc.yml

@@ -0,0 +1,11 @@
+# -*- coding: utf-8 -*-
+#
+# This file is part of Invenio.
+# Copyright (C) 2023 CERN.
+#
+# Invenio is free software; you can redistribute it and/or modify
+# it under the terms of the MIT License; see LICENSE file for more details.
+
+extends:
+  - '@inveniosoftware/eslint-config-invenio'
+  - '@inveniosoftware/eslint-config-invenio/prettier'

invenio_vocabularies/assets/semantic-ui/js/invenio_vocabularies/.prettierrc

@@ -0,0 +1 @@
+"@inveniosoftware/eslint-config-invenio/prettier-config.js"

invenio_vocabularies/assets/semantic-ui/js/invenio_vocabularies/index.js

@@ -0,0 +1,7 @@
+// This file is part of InvenioVocabularies
+// Copyright (C) 2023 CERN.
+//
+// Invenio is free software; you can redistribute it and/or modify it
+// under the terms of the MIT License; see LICENSE file for more details.
+
+export * from "./src";