integrate-module 0.2.15__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- integrate/__init__.py +79 -0
- integrate/integrate.py +2511 -0
- integrate/integrate_io.py +2539 -0
- integrate/integrate_obsolete.py +246 -0
- integrate/integrate_old.py +2800 -0
- integrate/integrate_plot.py +1988 -0
- integrate/integrate_plot_old.py +1420 -0
- integrate/integrate_rejection.py +1254 -0
- integrate/integrate_rejection_cli.py +203 -0
- integrate/integrate_timing_cli.py +706 -0
- integrate_module-0.2.15.dist-info/METADATA +157 -0
- integrate_module-0.2.15.dist-info/RECORD +16 -0
- integrate_module-0.2.15.dist-info/WHEEL +5 -0
- integrate_module-0.2.15.dist-info/entry_points.txt +3 -0
- integrate_module-0.2.15.dist-info/licenses/LICENSE +21 -0
- integrate_module-0.2.15.dist-info/top_level.txt +1 -0
integrate/__init__.py
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# Import rejection sampling functions from new module
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from integrate.integrate_rejection import integrate_rejection
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from integrate.integrate_rejection import integrate_rejection_range
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from integrate.integrate_rejection import integrate_posterior_chunk
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from integrate.integrate_rejection import integrate_posterior_main
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from integrate.integrate_rejection import likelihood_gaussian_diagonal
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from integrate.integrate_rejection import likelihood_gaussian_full
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from integrate.integrate_rejection import likelihood_multinomial
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from integrate.integrate_rejection import select_subset_for_inversion
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from integrate.integrate_rejection import cleanup_shared_memory
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from integrate.integrate_rejection import reconstruct_shared_arrays
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from integrate.integrate_rejection import create_shared_memory
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# Import other functions from main module
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from integrate.integrate import integrate_update_prior_attributes
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from integrate.integrate import integrate_posterior_stats
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from integrate.integrate import logl_T_est
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from integrate.integrate import lu_post_sample_logl
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from integrate.integrate import prior_data
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from integrate.integrate import prior_data_gaaem
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from integrate.integrate import prior_data_identity
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from integrate.integrate import forward_gaaem
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from integrate.integrate import synthetic_case
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from integrate.integrate import prior_model_layered
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from integrate.integrate import prior_model_workbench
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from integrate.integrate import prior_model_workbench_direct
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from integrate.integrate import posterior_cumulative_thickness
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#from integrate.integrate import integrate_rejection_multi
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from integrate.integrate import use_parallel
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from integrate.integrate import get_weight_from_position
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from integrate.integrate import entropy
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from integrate.integrate import class_id_to_idx
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from integrate.integrate import is_notebook
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from integrate.integrate import get_hypothesis_probability
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from integrate.integrate import sample_posterior_multiple_hypotheses
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from integrate.integrate_io import load_prior
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from integrate.integrate_io import load_prior_data
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from integrate.integrate_io import save_prior_data
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from integrate.integrate_io import load_prior_model
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from integrate.integrate_io import save_prior_model
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from integrate.integrate_io import load_data
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from integrate.integrate_io import get_geometry
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from integrate.integrate_io import read_gex
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from integrate.integrate_io import gex_to_stm
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from integrate.integrate_io import get_gex_file_from_data
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from integrate.integrate_io import write_stm_files
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from integrate.integrate_io import post_to_csv
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from integrate.integrate_io import copy_hdf5_file
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from integrate.integrate_io import hdf5_scan
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from integrate.integrate_io import get_case_data
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from integrate.integrate_io import write_data_gaussian
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from integrate.integrate_io import write_data_multinomial
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from integrate.integrate_io import check_data
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from integrate.integrate_io import merge_data
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from integrate.integrate_io import merge_posterior
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from integrate.integrate_io import read_usf
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from integrate.integrate_io import read_usf_mul
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from integrate.integrate_io import test_read_usf
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from integrate.integrate_plot import plot_geometry
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from integrate.integrate_plot import plot_profile
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from integrate.integrate_plot import plot_profile_continuous
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from integrate.integrate_plot import plot_profile_discrete
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from integrate.integrate_plot import plot_cumulative_probability_profile
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from integrate.integrate_plot import plot_T_EV
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from integrate.integrate_plot import plot_data_xy
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from integrate.integrate_plot import plot_data
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from integrate.integrate_plot import plot_data_prior_post
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from integrate.integrate_plot import plot_data_prior
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from integrate.integrate_plot import plot_prior_stats
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from integrate.integrate_plot import plot_feature_2d
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from integrate.integrate_plot import plot_posterior_cumulative_thickness
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from integrate.integrate_plot import get_clim_cmap
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# REMOVE CLI IMPORTS - These cause circular dependencies
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# from . import integrate_cli
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# from . import integrate_timing
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