imap-processing 0.12.0__py3-none-any.whl → 0.13.0__py3-none-any.whl

imap_processing/tests/swapi/test_swapi_l1.py

@@ -144,7 +144,7 @@ def test_process_swapi_science(decom_test_data):
     assert hk_ds["epoch"].shape == (17,)
     hk_duplicate_ds = xr.concat([hk_ds, hk_ds], dim="epoch")
     assert hk_duplicate_ds["epoch"].shape == (34,)
-    processed_data = process_swapi_science(ds_data, hk_duplicate_ds, data_version="001")
+    processed_data = process_swapi_science(ds_data, hk_duplicate_ds)
 
     # Test dataset dimensions
     assert processed_data.sizes == {
@@ -162,9 +162,7 @@ def test_process_swapi_science(decom_test_data):
 
     # make PLAN_ID data incorrect. Now processed data should have less sweeps
     ds_data["plan_id"].data[:24] = np.arange(24)
-    processed_data = process_swapi_science(
-        ds_data, decom_test_data[SWAPIAPID.SWP_HK], data_version="001"
-    )
+    processed_data = process_swapi_science(ds_data, decom_test_data[SWAPIAPID.SWP_HK])
     assert processed_data.sizes == {
         "epoch": 10,
         "energy": 72,
@@ -172,7 +170,7 @@ def test_process_swapi_science(decom_test_data):
     }
 
     # Test CDF File
-    cdf_filename = "imap_swapi_l1_sci_20240924_v001.cdf"
+    cdf_filename = "imap_swapi_l1_sci_20240924_v999.cdf"
     cdf_path = write_cdf(processed_data)
     assert cdf_path.name == cdf_filename
 
@@ -180,18 +178,18 @@ def test_process_swapi_science(decom_test_data):
 def test_swapi_l1_cdf(swapi_l0_test_data_path):
     """Test housekeeping processing and CDF file creation"""
     test_packet_file = swapi_l0_test_data_path / "imap_swapi_l0_raw_20240924_v001.pkts"
-    processed_data = swapi_l1([test_packet_file], data_version="v001")
+    processed_data = swapi_l1([test_packet_file])
     # hk cdf file
-    hk_cdf_filename = "imap_swapi_l1_hk_20240924_v001.cdf"
+    hk_cdf_filename = "imap_swapi_l1_hk_20240924_v999.cdf"
     # TODO: how to add ignore ISTP checks for HK data to cli.py
     hk_cdf_path = write_cdf(processed_data[0])
     assert hk_cdf_path.name == hk_cdf_filename
 
-    processed_data = swapi_l1([test_packet_file, hk_cdf_path], data_version="v001")
+    processed_data = swapi_l1([test_packet_file, hk_cdf_path])
 
     assert processed_data[0].attrs["Apid"] == f"{SWAPIAPID.SWP_SCI}"
 
     # Test CDF File
-    cdf_filename = "imap_swapi_l1_sci_20240924_v001.cdf"
+    cdf_filename = "imap_swapi_l1_sci_20240924_v999.cdf"
     cdf_path = write_cdf(processed_data[0])
     assert cdf_path.name == cdf_filename

imap_processing/tests/swapi/test_swapi_l2.py

@@ -1,32 +1,204 @@
 import numpy as np
+import pandas as pd
+import pytest
 
+from imap_processing import imap_module_directory
 from imap_processing.cdf.utils import write_cdf
 from imap_processing.swapi.l1.swapi_l1 import swapi_l1
-from imap_processing.swapi.l2.swapi_l2 import TIME_PER_BIN, swapi_l2
+from imap_processing.swapi.l2.swapi_l2 import (
+    TIME_PER_BIN,
+    solve_full_sweep_energy,
+    swapi_l2,
+)
+from imap_processing.swapi.swapi_utils import read_swapi_lut_table
 
 
-def test_swapi_l2_cdf(swapi_l0_test_data_path):
+@pytest.fixture(scope="session")
+def esa_unit_conversion_table() -> pd.DataFrame:
+    """
+    Read the ESA unit conversion table.
+
+    Returns
+    -------
+    esa_unit_conversion_table : pandas.DataFrame
+        The ESA unit conversion table.
+    """
+    esa_file_path = (
+        imap_module_directory
+        / "tests/swapi/lut/imap_swapi_esa-unit-conversion_20250211_v000.csv"
+    )
+    df = read_swapi_lut_table(esa_file_path)
+    return df
+
+
+@pytest.fixture(scope="session")
+def lut_notes_table() -> pd.DataFrame:
+    """
+    Read the LUT notes table.
+
+    Returns
+    -------
+    lut_notes_table : pandas.DataFrame
+        The LUT notes table.
+    """
+    lut_notes_file_path = (
+        imap_module_directory / "tests/swapi/lut/imap_swapi_lut-notes_20250211_v000.csv"
+    )
+    df = read_swapi_lut_table(lut_notes_file_path)
+
+    return df
+
+
+def test_swapi_l2_cdf(
+    swapi_l0_test_data_path, esa_unit_conversion_table, lut_notes_table
+):
     """Test housekeeping processing and CDF file creation"""
     test_packet_file = swapi_l0_test_data_path / "imap_swapi_l0_raw_20240924_v001.pkts"
     # Create HK CDF File
-    processed_hk_data = swapi_l1([test_packet_file], data_version="v001")
-    hk_cdf_filename = "imap_swapi_l1_hk_20240924_v001.cdf"
+    processed_hk_data = swapi_l1([test_packet_file])
+    hk_cdf_filename = "imap_swapi_l1_hk_20240924_v999.cdf"
     hk_cdf_path = write_cdf(processed_hk_data[0])
     assert hk_cdf_path.name == hk_cdf_filename
 
     # Create L1 CDF File
-    processed_sci_data = swapi_l1([test_packet_file, hk_cdf_path], data_version="v001")
-    cdf_filename = "imap_swapi_l1_sci_20240924_v001.cdf"
+    processed_sci_data = swapi_l1([test_packet_file, hk_cdf_path])
+    cdf_filename = "imap_swapi_l1_sci_20240924_v999.cdf"
     cdf_path = write_cdf(processed_sci_data[0])
     assert cdf_path.name == cdf_filename
 
     l1_dataset = processed_sci_data[0]
-    l2_dataset = swapi_l2(l1_dataset, data_version="v001")
+    l2_dataset = swapi_l2(
+        l1_dataset,
+        esa_table_df=esa_unit_conversion_table,
+        lut_notes_df=lut_notes_table,
+    )
     l2_cdf = write_cdf(l2_dataset)
-    assert l2_cdf.name == "imap_swapi_l2_sci_20240924_v001.cdf"
+    assert l2_cdf.name == "imap_swapi_l2_sci_20240924_v999.cdf"
 
     # Test uncertainty variables are as expected
     np.testing.assert_array_equal(
         l2_dataset["swp_pcem_rate_err_plus"],
         l1_dataset["swp_pcem_counts_err_plus"] / TIME_PER_BIN,
     )
+
+
+def test_solve_full_sweep_energy(esa_unit_conversion_table, lut_notes_table):
+    """Test the solve_full_sweep_energy function"""
+    # Find 9 fine energies for unique ESA_LVL5 values
+    esa_lvl5_arr = [7778, 5673, 4973, 4311]
+    esa_lvl5_hex = np.vectorize(lambda x: format(x, "X"))(esa_lvl5_arr)
+    sweeps_energy_value = solve_full_sweep_energy(
+        esa_lvl5_hex, esa_unit_conversion_table, lut_notes_table
+    )
+    assert sweeps_energy_value.shape == (4, 72)
+
+    # First check that first 63 values are same as the fixed energy values.
+    fixed_energy_values = np.array(
+        [
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1163,
+            1068,
+            981,
+            901,
+            828,
+            760,
+            698,
+            641,
+            589,
+            544,
+            497,
+            459,
+            421,
+            389,
+            355,
+            326,
+            298,
+            275,
+            252,
+            234,
+            214,
+            195,
+            181,
+            167,
+            153,
+            139,
+            129,
+            120,
+            107,
+        ]
+    )
+    assert np.all(sweeps_energy_value[:, :63] == fixed_energy_values)
+
+    # Now, test that the last 9 fine energy values are as expected for first sweep.
+    # I manually picked those values from LUT table.
+    expected_energy_values = np.array(
+        [17310, 17682, 18062, 18450, 18846, 19251, 19251, 19251, 19251]
+    )
+
+    assert np.all(sweeps_energy_value[0, -9:] == expected_energy_values)
+
+    # Test mismatch values for 9 fine steps x 4 steps.
+    mismatch_value = [1]
+    with pytest.raises(
+        ValueError, match="These ESA_LVL5 values not found in lut-notes table"
+    ):
+        solve_full_sweep_energy(
+            np.array(mismatch_value), esa_unit_conversion_table, lut_notes_table
+        )
+
+    # Check for value that should return 0 index's energy value.
+    # Same as before, I picked values from lut notes table that would
+    # result in 0 index.
+    esa_lvl5_arr = np.array([format(8168, "X")])
+    sweeps_energy_value = solve_full_sweep_energy(
+        esa_lvl5_arr, esa_unit_conversion_table, lut_notes_table
+    )
+    assert sweeps_energy_value.shape == (1, 72)
+    assert sweeps_energy_value[0][63] == 19149
+    expected_energy_values = np.array(
+        [
+            19149,
+            19251,
+            19251,
+            19251,
+            19251,
+            19251,
+            19251,
+            19251,
+            19251,
+        ]
+    )
+    assert np.all(sweeps_energy_value[0, -9:] == expected_energy_values)

imap_processing/tests/swe/lut/checker-board-indices.csv

@@ -0,0 +1,24 @@
+0,371,12,383,24,395,36,407,48,419,60,431,72,443,84,455,96,467,108,479,120,491,132,503,144,515,156,527,168,539
+180,551,192,563,204,575,216,587,228,599,240,611,252,623,264,635,276,647,288,659,300,671,312,683,324,695,336,707,348,719
+360,11,372,23,384,35,396,47,408,59,420,71,432,83,444,95,456,107,468,119,480,131,492,143,504,155,516,167,528,179
+540,191,552,203,564,215,576,227,588,239,600,251,612,263,624,275,636,287,648,299,660,311,672,323,684,335,696,347,708,359
+1,370,13,382,25,394,37,406,49,418,61,430,73,442,85,454,97,466,109,478,121,490,133,502,145,514,157,526,169,538
+181,550,193,562,205,574,217,586,229,598,241,610,253,622,265,634,277,646,289,658,301,670,313,682,325,694,337,706,349,718
+361,10,373,22,385,34,397,46,409,58,421,70,433,82,445,94,457,106,469,118,481,130,493,142,505,154,517,166,529,178
+541,190,553,202,565,214,577,226,589,238,601,250,613,262,625,274,637,286,649,298,661,310,673,322,685,334,697,346,709,358
+2,369,14,381,26,393,38,405,50,417,62,429,74,441,86,453,98,465,110,477,122,489,134,501,146,513,158,525,170,537
+182,549,194,561,206,573,218,585,230,597,242,609,254,621,266,633,278,645,290,657,302,669,314,681,326,693,338,705,350,717
+362,9,374,21,386,33,398,45,410,57,422,69,434,81,446,93,458,105,470,117,482,129,494,141,506,153,518,165,530,177
+542,189,554,201,566,213,578,225,590,237,602,249,614,261,626,273,638,285,650,297,662,309,674,321,686,333,698,345,710,357
+3,368,15,380,27,392,39,404,51,416,63,428,75,440,87,452,99,464,111,476,123,488,135,500,147,512,159,524,171,536
+183,548,195,560,207,572,219,584,231,596,243,608,255,620,267,632,279,644,291,656,303,668,315,680,327,692,339,704,351,716
+363,8,375,20,387,32,399,44,411,56,423,68,435,80,447,92,459,104,471,116,483,128,495,140,507,152,519,164,531,176
+543,188,555,200,567,212,579,224,591,236,603,248,615,260,627,272,639,284,651,296,663,308,675,320,687,332,699,344,711,356
+4,367,16,379,28,391,40,403,52,415,64,427,76,439,88,451,100,463,112,475,124,487,136,499,148,511,160,523,172,535
+184,547,196,559,208,571,220,583,232,595,244,607,256,619,268,631,280,643,292,655,304,667,316,679,328,691,340,703,352,715
+364,7,376,19,388,31,400,43,412,55,424,67,436,79,448,91,460,103,472,115,484,127,496,139,508,151,520,163,532,175
+544,187,556,199,568,211,580,223,592,235,604,247,616,259,628,271,640,283,652,295,664,307,676,319,688,331,700,343,712,355
+5,366,17,378,29,390,41,402,53,414,65,426,77,438,89,450,101,462,113,474,125,486,137,498,149,510,161,522,173,534
+185,546,197,558,209,570,221,582,233,594,245,606,257,618,269,630,281,642,293,654,305,666,317,678,329,690,341,702,353,714
+365,6,377,18,389,30,401,42,413,54,425,66,437,78,449,90,461,102,473,114,485,126,497,138,509,150,521,162,533,174
+545,186,557,198,569,210,581,222,593,234,605,246,617,258,629,270,641,282,653,294,665,306,677,318,689,330,701,342,713,354

imap_processing/tests/swe/lut/imap_swe_esa-lut_20250301_v000.csv

@@ -0,0 +1,385 @@
+table_idx,esa_step,esa_v,v_index,ialirt
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imap_processing/tests/swe/lut/imap_swe_l1b-in-flight-cal_20240510_20260716_v000.csv

@@ -0,0 +1,3 @@
+met_time,cem1,cem2,cem3,cem4,cem5,cem6,cem7
+453050308,1,1,1,1,1,1,1
+1782864000,1,1,1,1,1,1,1

imap_processing/tests/swe/test_swe_l1a.py

@@ -5,26 +5,26 @@ from imap_processing.swe.l1a.swe_l1a import swe_l1a
 
 def test_cdf_creation():
     test_data_path = "tests/swe/l0_data/2024051010_SWE_SCIENCE_packet.bin"
-    processed_data = swe_l1a(imap_module_directory / test_data_path, "001")
+    processed_data = swe_l1a(imap_module_directory / test_data_path)
 
     cem_raw_cdf_filepath = write_cdf(processed_data[0])
 
-    assert cem_raw_cdf_filepath.name == "imap_swe_l1a_sci_20240510_v001.cdf"
+    assert cem_raw_cdf_filepath.name == "imap_swe_l1a_sci_20240510_v999.cdf"
 
 
 def test_cdf_creation_hk():
     test_data_path = "tests/swe/l0_data/2024051010_SWE_HK_packet.bin"
-    processed_data = swe_l1a(imap_module_directory / test_data_path, "001")
+    processed_data = swe_l1a(imap_module_directory / test_data_path)
 
     hk_cdf_filepath = write_cdf(processed_data[0])
 
-    assert hk_cdf_filepath.name == "imap_swe_l1a_hk_20240510_v001.cdf"
+    assert hk_cdf_filepath.name == "imap_swe_l1a_hk_20240510_v999.cdf"
 
 
 def test_cdf_creation_cem_raw():
     test_data_path = "tests/swe/l0_data/2024051011_SWE_CEM_RAW_packet.bin"
-    processed_data = swe_l1a(imap_module_directory / test_data_path, "001")
+    processed_data = swe_l1a(imap_module_directory / test_data_path)
 
     cem_raw_cdf_filepath = write_cdf(processed_data[0])
 
-    assert cem_raw_cdf_filepath.name == "imap_swe_l1a_cem-raw_20240510_v001.cdf"
+    assert cem_raw_cdf_filepath.name == "imap_swe_l1a_cem-raw_20240510_v999.cdf"