iints-sdk-python35 1.5.7__py3-none-any.whl → 1.5.8__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (13) hide show
  1. iints/__init__.py +1 -1
  2. iints/core/patient/bergman_model.py +5 -1
  3. iints/data/virtual_patients/reference_azt1d_t1d.yaml +1 -1
  4. iints/data/virtual_patients/reference_free_living_t1d.yaml +1 -1
  5. iints/data/virtual_patients/reference_hupa_ucm_t1d.yaml +1 -1
  6. {iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/METADATA +1 -1
  7. {iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/RECORD +13 -13
  8. {iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/WHEEL +0 -0
  9. {iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/entry_points.txt +0 -0
  10. {iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/licenses/LICENSE +0 -0
  11. {iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/licenses/LICENSE-MIT-IINTS-LEGACY +0 -0
  12. {iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/licenses/NOTICE +0 -0
  13. {iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/top_level.txt +0 -0
iints/__init__.py CHANGED
@@ -11,7 +11,7 @@ except ImportError: # pragma: no cover - Python < 3.8 fallback
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  try:
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  __version__ = version("iints-sdk-python35")
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  except PackageNotFoundError: # pragma: no cover - source tree fallback
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- __version__ = "1.5.7"
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+ __version__ = "1.5.8"
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  # Note to developers: this SDK is currently maintained by a single author.
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  # Please report bugs via GitHub issues and feel free to contribute fixes via PRs.
iints/core/patient/bergman_model.py CHANGED
@@ -196,7 +196,11 @@ class BergmanPatientModel:
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  # Meals must pass through gastric emptying before intestinal
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  # absorption; direct gut injection creates impossible five-minute spikes.
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  if true_carbs > 0:
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- self._state[3] += true_carbs * 1000.0 # g -> mg
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+ # Only the bioavailable fraction should enter the glucose
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+ # appearance pathway; this keeps large meals from producing
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+ # unrealistically sharp five-minute CGM jumps.
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+ bioavailability = max(0.0, min(float(self.params.f_bio), 1.0))
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+ self._state[3] += true_carbs * bioavailability * 1000.0 # g -> mg
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  # --- Prepare exogenous insulin rate ---
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  # Convert Units to mU, spread evenly over time_step (mU/min)
iints/data/virtual_patients/reference_azt1d_t1d.yaml CHANGED
@@ -6,7 +6,7 @@ initial_glucose: 135.0
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  glucose_absorption_rate: 0.03
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  insulin_action_duration: 300.0
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  insulin_peak_time: 75.0
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- meal_mismatch_epsilon: 0.95
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+ meal_mismatch_epsilon: 0.83
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  dawn_phenomenon_strength: 4.0
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  dawn_start_hour: 4.0
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  dawn_end_hour: 8.0
iints/data/virtual_patients/reference_free_living_t1d.yaml CHANGED
@@ -6,7 +6,7 @@ initial_glucose: 130.0
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  glucose_absorption_rate: 0.03
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  insulin_action_duration: 300.0
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  insulin_peak_time: 75.0
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- meal_mismatch_epsilon: 0.95
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+ meal_mismatch_epsilon: 0.83
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  dawn_phenomenon_strength: 8.0
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  dawn_start_hour: 4.0
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  dawn_end_hour: 8.0
iints/data/virtual_patients/reference_hupa_ucm_t1d.yaml CHANGED
@@ -6,7 +6,7 @@ initial_glucose: 130.0
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  glucose_absorption_rate: 0.03
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  insulin_action_duration: 300.0
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  insulin_peak_time: 75.0
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- meal_mismatch_epsilon: 0.95
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+ meal_mismatch_epsilon: 0.83
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  dawn_phenomenon_strength: 8.0
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  dawn_start_hour: 4.0
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  dawn_end_hour: 8.0
{iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: iints-sdk-python35
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- Version: 1.5.7
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+ Version: 1.5.8
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  Summary: A pre-clinical Edge-AI SDK for diabetes management validation.
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  Author-email: Rune Bobbaers <rune.bobbaers@gmail.com>
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  License-Expression: Apache-2.0
{iints_sdk_python35-1.5.7.dist-info → iints_sdk_python35-1.5.8.dist-info}/RECORD RENAMED
@@ -1,4 +1,4 @@
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- iints/__init__.py,sha256=graBm7ogNQfUpeD6bz1LjGw8TVSO7g3CdP2-zybE0uc,9991
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+ iints/__init__.py,sha256=7HnNPDTtPHA9VgOS3kwr1y0JbE_poBlAX0pwJiSAu-I,9991
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  iints/demo_assets.py,sha256=h9bXB6aBptwtvd2drAjg4wp3XE7zXuESxVG8vJgSUJU,2071
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  iints/highlevel.py,sha256=QGxzgl5m_ATvckl4yKr6KE5LWYEZcqjgYXHWtx6xFEA,21309
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  iints/metrics.py,sha256=O9hqOqJpUhUJDqsbfuqRMS9dkV97gzcgh3Y2jYUqHzg,907
@@ -70,7 +70,7 @@ iints/core/algorithms/standard_pump_algo.py,sha256=Ejc1rPgu2Ep8AjNCQNZlge2IknM-o
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  iints/core/devices/__init__.py,sha256=viLnfRfQeZI2DvrrUefPENW8YNSkerov4KTEEnYsjMw,163
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  iints/core/devices/models.py,sha256=vhgGcKNTgSI80Oy_nGm-IhihfNEomkmU0kfE6UEfghQ,13358
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  iints/core/patient/__init__.py,sha256=iWjdCgL8pr3EX3IkVcME_apO-rXwDmSN1jPeusgKtMU,328
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- iints/core/patient/bergman_model.py,sha256=nZHfaeGg7FrBMN6c6a-xKJmEoiMidlmXXfgu8-MQNps,14350
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+ iints/core/patient/bergman_model.py,sha256=ux7Dv0WFZAT4BJLZgH6cHdR4b4wyW8Ezxfq4fMt_mQg,14644
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  iints/core/patient/models.py,sha256=XubEptgNLZgOEMjsZ_8xnoZW-Iuan_O0H5pbo1xT1TY,15086
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  iints/core/patient/patient_factory.py,sha256=fWl1wLGLX7E77G_sn-lUNvV0eHOFviujV0z_-RLw7Ns,6258
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  iints/core/patient/profile.py,sha256=SW9o8imFnAGImz_PLQRWNM9fn7Is1jt9dDFYnhSk5Dk,3654
@@ -113,9 +113,9 @@ iints/data/virtual_patients/clinic_safe_pizza.yaml,sha256=_cuzfpA1H3SS6VaoaFrku0
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  iints/data/virtual_patients/clinic_safe_stress_meal.yaml,sha256=gbYZT0k5Ny8PoWL7TeHEzm-HVz8EHKOpRMxfZxJnxwg,229
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  iints/data/virtual_patients/default_patient.yaml,sha256=yVXjJO8b6vOg-xQ1Z5ol27uvXucMyXNeliNUX15RKSY,528
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  iints/data/virtual_patients/patient_559_config.yaml,sha256=xXAwkJe7VAhVzeVcLlqnLwSg3VbZH8PZqJS-G09_RV8,581
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- iints/data/virtual_patients/reference_azt1d_t1d.yaml,sha256=u4qA8VYo0U4emTA48hD_q1XGBTbRdw46Xlu67eyXosY,299
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- iints/data/virtual_patients/reference_free_living_t1d.yaml,sha256=L_FBcrHuUtpUTy3-B8dp9D5f7hvnVTmfd8aLIcvfTMU,299
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- iints/data/virtual_patients/reference_hupa_ucm_t1d.yaml,sha256=L_FBcrHuUtpUTy3-B8dp9D5f7hvnVTmfd8aLIcvfTMU,299
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+ iints/data/virtual_patients/reference_azt1d_t1d.yaml,sha256=O87D0G1KYutm5L1EeP_RhIR-K_tj1kvrt00eIWpKCaE,299
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+ iints/data/virtual_patients/reference_free_living_t1d.yaml,sha256=VafFxuuEYLbD4ZpVw-puDpM33e1JuJYrBR1wISFIcUs,299
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+ iints/data/virtual_patients/reference_hupa_ucm_t1d.yaml,sha256=VafFxuuEYLbD4ZpVw-puDpM33e1JuJYrBR1wISFIcUs,299
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  iints/emulation/__init__.py,sha256=63ph-98ZFOa_9QFvd7fnhi29hl9oSavznpycyNHUhsU,2000
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  iints/emulation/legacy_base.py,sha256=_Wdy8Nc38bPOYlMdzr0wRfF_kBr-u64FSEE4-BmiD2g,15254
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  iints/emulation/medtronic_780g.py,sha256=KWMeMixta8QYAr6QgbMVOGW7DieFCOETR-HIt5T0mj4,13351
@@ -195,9 +195,9 @@ iints/validation/schemas.py,sha256=4a2MplgyyY5vkzIRXUAgTXIWLrJbx4Z25Mlq_dmumwo,4
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  iints/visualization/__init__.py,sha256=OdxVHDpY-9bDt8DTWWd-dspn1p0O9T908Cck-IGFaiM,640
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  iints/visualization/cockpit.py,sha256=Y7hoJXcTEWQ8yLiU5X5abT58uqGGsQllftXJwqerG1E,25057
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  iints/visualization/uncertainty_cloud.py,sha256=I5nNzSitgai21rkul31YNtJriSEmCeTsW0GWW2HUskY,19848
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- iints_sdk_python35-1.5.7.dist-info/licenses/LICENSE,sha256=pmk2DGE1Cj9zr5hfus2x_sILJBnIBR1KvJWp4OXYqc0,8978
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- iints_sdk_python35-1.5.7.dist-info/licenses/LICENSE-MIT-IINTS-LEGACY,sha256=HzvJLhuEHRUlY9Sl1PZ3-jG0ZBOuMXtbrMF1la02M3E,1078
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- iints_sdk_python35-1.5.7.dist-info/licenses/NOTICE,sha256=4sQjo6BqDGi1abL9Gp9W2F6851cpzE3jvIl1cpHuO0I,678
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+ iints_sdk_python35-1.5.8.dist-info/licenses/LICENSE,sha256=pmk2DGE1Cj9zr5hfus2x_sILJBnIBR1KvJWp4OXYqc0,8978
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+ iints_sdk_python35-1.5.8.dist-info/licenses/LICENSE-MIT-IINTS-LEGACY,sha256=HzvJLhuEHRUlY9Sl1PZ3-jG0ZBOuMXtbrMF1la02M3E,1078
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+ iints_sdk_python35-1.5.8.dist-info/licenses/NOTICE,sha256=4sQjo6BqDGi1abL9Gp9W2F6851cpzE3jvIl1cpHuO0I,678
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  mdmp_ai/__init__.py,sha256=chKE8_Wo7oxj5CFqZ9NcyLjAHM5npvaKkLvTdBPtjo8,160
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  mdmp_ai/lineage.py,sha256=LY_sshoVTLPQfhP3ZDLv0drdBoxGW_YXbdAb_XMAllQ,7065
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  mdmp_core/__init__.py,sha256=5kvhQwYy-puaztBzzohBex_wiv2YB4Ui9MWk1hTiVDA,3768
@@ -237,8 +237,8 @@ mdmp_integrations/__init__.py,sha256=r5z2RODMmZCFHkvAOahcL576S1Dp0AuyQXQAvefzVQQ
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  mdmp_integrations/dvc.py,sha256=1UVL_It-Xp6ad8G66ubm9YaF0O9n31EMiJ466zPK9vY,740
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  mdmp_integrations/mlflow.py,sha256=YiT6LKu_sN2k1Gzz4U4kqby_JNhQUiOi38AO6sCPvPg,367
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  mdmp_integrations/wandb.py,sha256=r1-gXYkIKN396K0VU6uuqk1SWTNGqto1Q9HZ-RKBEss,496
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- iints_sdk_python35-1.5.7.dist-info/METADATA,sha256=3jD2V9Fn3xl6DmxHjta-hhAQHQaKREVb347b7_tFRgg,4929
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- iints_sdk_python35-1.5.7.dist-info/WHEEL,sha256=aeYiig01lYGDzBgS8HxWXOg3uV61G9ijOsup-k9o1sk,91
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- iints_sdk_python35-1.5.7.dist-info/entry_points.txt,sha256=QyVnqN-T-wsrL3ITYEFUSoiu57DuqnEQy8aYtirDr-8,569
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- iints_sdk_python35-1.5.7.dist-info/top_level.txt,sha256=yCCM5o2LCIQj9aEAZ-xa_EVxiiEhPNPDEgaABFNZGvs,55
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- iints_sdk_python35-1.5.7.dist-info/RECORD,,
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+ iints_sdk_python35-1.5.8.dist-info/METADATA,sha256=_POnCXrh0Fl2xFrXecbh_7zZ6fMA4874sUCGKSvuP48,4929
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+ iints_sdk_python35-1.5.8.dist-info/WHEEL,sha256=aeYiig01lYGDzBgS8HxWXOg3uV61G9ijOsup-k9o1sk,91
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+ iints_sdk_python35-1.5.8.dist-info/entry_points.txt,sha256=QyVnqN-T-wsrL3ITYEFUSoiu57DuqnEQy8aYtirDr-8,569
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+ iints_sdk_python35-1.5.8.dist-info/top_level.txt,sha256=yCCM5o2LCIQj9aEAZ-xa_EVxiiEhPNPDEgaABFNZGvs,55
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+ iints_sdk_python35-1.5.8.dist-info/RECORD,,