iints-sdk-python35 1.1.3__py3-none-any.whl → 1.2.0__py3-none-any.whl

iints/__init__.py

@@ -11,7 +11,7 @@ except ImportError:  # pragma: no cover - Python < 3.8 fallback
 try:
     __version__ = version("iints-sdk-python35")
 except PackageNotFoundError:  # pragma: no cover - source tree fallback
-    __version__ = "1.1.3"
+    __version__ = "1.2.0"
 
 # Note to developers: this SDK is currently maintained by a single author.
 # Please report bugs via GitHub issues and feel free to contribute fixes via PRs.
@@ -56,17 +56,23 @@ from .data.importer import (
     export_demo_csv,
     export_standard_csv,
     guess_column_mapping,
+    import_carelink_csv,
+    import_carelink_timeline,
     import_cgm_csv,
     import_cgm_dataframe,
+    load_carelink_event_log,
     load_demo_dataframe,
     scenario_from_csv,
     scenario_from_dataframe,
+    summarize_carelink_csv,
 )
 from .data.nightscout import NightscoutConfig, import_nightscout
 from .data.tidepool import TidepoolClient, load_openapi_spec
 from .data.guardians import mdmp_gate, MDMPGateError
 from .data.synthetic_mirror import generate_synthetic_mirror, SyntheticMirrorArtifact
 from .analysis.metrics import generate_benchmark_metrics # Added for benchmark
+from .analysis.carelink_workbench import build_carelink_workbench
+from .analysis.poster import generate_results_poster
 from .analysis.reporting import ClinicalReportGenerator
 from .analysis.edge_efficiency import EnergyEstimate, estimate_energy_per_decision
 from .ai import AIResponse, IINTSAssistant, MDMPGuard
@@ -160,11 +166,15 @@ __all__ = [
     "export_demo_csv",
     "export_standard_csv",
     "guess_column_mapping",
+    "import_carelink_csv",
+    "import_carelink_timeline",
     "import_cgm_csv",
     "import_cgm_dataframe",
+    "load_carelink_event_log",
     "load_demo_dataframe",
     "scenario_from_csv",
     "scenario_from_dataframe",
+    "summarize_carelink_csv",
     "NightscoutConfig",
     "import_nightscout",
     "TidepoolClient",
@@ -175,6 +185,7 @@ __all__ = [
     "SyntheticMirrorArtifact",
     # Analysis Metrics
     "generate_benchmark_metrics",
+    "build_carelink_workbench",
     "ClinicalReportGenerator",
     "EnergyEstimate",
     "estimate_energy_per_decision",
@@ -185,6 +196,7 @@ __all__ = [
     "generate_report",
     "generate_quickstart_report",
     "generate_demo_report",
+    "generate_results_poster",
     # High-level API
     "run_simulation",
     "run_full",

iints/ai/prompts.py

@@ -8,8 +8,9 @@ TaskName = Literal["explain_decision", "analyze_trends", "detect_anomalies", "ge
 MAX_PROMPT_PAYLOAD_CHARS = 12000
 
 SYSTEM_PROMPT = (
-    "You are the IINTS-AF research assistant for closed-loop insulin delivery simulations. "
-    "Explain simulation behavior clearly, conservatively, and in plain language. "
+    "You are the IINTS-AF research assistant for closed-loop insulin delivery simulations "
+    "and imported glucose datasets. "
+    "Explain glycemic behavior clearly, conservatively, and in plain language. "
     "Do not give medical advice, treatment instructions, or patient-specific recommendations. "
     "State uncertainty when the input is incomplete. "
     "For research use only."
@@ -17,39 +18,39 @@ SYSTEM_PROMPT = (
 
 TASK_TEMPLATES: dict[TaskName, str] = {
     "explain_decision": (
-        "Given this single simulation step, explain:\n"
-        "1. What the algorithm decided and why\n"
-        "2. Whether the independent safety supervisor likely intervened\n"
-        "3. Whether the decision appears safe in context\n\n"
+        "Given this single decision step or noteworthy glucose snapshot, explain:\n"
+        "1. What is happening in the data and why it stands out\n"
+        "2. Whether there are safety signals, supervision, or notable context clues\n"
+        "3. What a research user should pay attention to next\n\n"
         "Respond in 3 short paragraphs.\n\n"
-        "Simulation step JSON:\n{data}"
+        "Input JSON:\n{data}"
     ),
     "analyze_trends": (
-        "Review this glucose-oriented simulation payload and summarize the main glycemic trends.\n"
+        "Review this glucose-oriented payload and summarize the main glycemic trends.\n"
         "Focus on direction, stability, excursions, and likely triggers.\n"
         "Respond with:\n"
         "- Trend summary\n"
         "- Main risk signals\n"
         "- Short operational takeaway\n\n"
-        "Simulation payload JSON:\n{data}"
+        "Payload JSON:\n{data}"
     ),
     "detect_anomalies": (
-        "Inspect this run summary and identify unusual patterns, inconsistent values, or clinically relevant anomalies.\n"
+        "Inspect this run or imported-data summary and identify unusual patterns, inconsistent values, or clinically relevant anomalies.\n"
         "Respond with:\n"
         "- Detected anomalies\n"
         "- Why each anomaly matters\n"
         "- Whether follow-up validation is recommended\n\n"
-        "Run summary JSON:\n{data}"
+        "Summary JSON:\n{data}"
     ),
     "generate_report": (
-        "Write a concise markdown report for this IINTS-AF simulation run.\n"
+        "Write a concise markdown report for this IINTS-AF simulation run or imported personal glucose dataset.\n"
         "Include sections:\n"
         "1. Executive summary\n"
         "2. Glycemic behavior\n"
-        "3. Safety and supervisor behavior\n"
-        "4. Notable events or anomalies\n"
+        "3. Safety, supervision, or device behavior\n"
+        "4. Notable events, patterns, or anomalies\n"
         "5. Research-only conclusion\n\n"
-        "Simulation run JSON:\n{data}"
+        "Input JSON:\n{data}"
     ),
 }
 

iints/analysis/__init__.py

@@ -1,12 +1,16 @@
 from .clinical_metrics import ClinicalMetricsCalculator, ClinicalMetricsResult
 from .baseline import compute_metrics, run_baseline_comparison, write_baseline_comparison
+from .carelink_workbench import build_carelink_workbench
+from .poster import generate_results_poster
 from .reporting import ClinicalReportGenerator
 
 __all__ = [
+    "build_carelink_workbench",
     "ClinicalMetricsCalculator",
     "ClinicalMetricsResult",
     "ClinicalReportGenerator",
     "compute_metrics",
+    "generate_results_poster",
     "run_baseline_comparison",
     "write_baseline_comparison",
 ]