hyper-connections 0.4.2__py3-none-any.whl → 0.4.3__py3-none-any.whl

hyper_connections/hyper_connections.py

@@ -48,7 +48,7 @@ def get_expand_reduce_stream_functions(
     dim = None,
     disable = False
 ):
-    if num_streams == 1 or disable:
+    if disable:
         return (nn.Identity(), nn.Identity())
 
     if add_stream_embed:

hyper_connections/hyper_connections_channel_first.py

@@ -41,7 +41,7 @@ def identity(t):
 
 def get_expand_reduce_stream_functions(num_streams, disable = False):
 
-    if num_streams == 1 or disable:
+    if disable:
         return (nn.Identity(), nn.Identity())
 
     expand_fn = Reduce(pattern = 'b ... -> (b s) ...', reduction = 'repeat', s = num_streams)

hyper_connections/hyper_connections_with_multi_branch_inputs.py

@@ -42,7 +42,7 @@ def identity(t):
 # main functions
 
 def get_expand_reduce_stream_functions(cls, num_streams, disable = False):
-    if num_streams == 1 or disable:
+    if disable:
         return (nn.Identity(), nn.Identity())
 
     expand_fn = Reduce(pattern = 'b ... -> (b s) ...', reduction = 'repeat', s = num_streams)

hyper_connections/hyper_connections_with_multi_input_streams.py

@@ -33,7 +33,7 @@ def default(v, d):
 
 def get_expand_reduce_stream_functions(num_streams, disable = False):
 
-    if num_streams == 1 or disable:
+    if disable:
         return (nn.Identity(), nn.Identity())
 
     expand_fn = Reduce(pattern = 'b ... -> (b s) ...', reduction = 'repeat', s = num_streams)

hyper_connections/mHCv2.py

@@ -0,0 +1,541 @@
+from __future__ import annotations
+from typing import Callable
+
+from functools import partial
+from random import randrange
+
+import torch
+from torch import nn, cat
+import torch.nn.functional as F
+from torch.nn import Module, Sequential
+from torch.utils._pytree import tree_flatten, tree_unflatten
+
+from einops import rearrange, repeat, reduce, einsum
+from einops.layers.torch import Rearrange, Reduce
+
+"""
+ein notation:
+b - batch
+d - feature dimension
+s - residual streams
+t - residual streams + num branch inputs
+f - number of fractions (division of feature dimension space)
+v - number of views for branch input
+p - proposals
+"""
+
+# helper functions
+
+def exists(v):
+    return v is not None
+
+def divisible_by(num, den):
+    return (num % den) == 0
+
+def default(v, d):
+    return v if exists(v) else d
+
+def identity(t):
+    return t
+
+def add(x, y):
+    return x + y
+
+# sinkhorn
+
+def l1norm(t, dim):
+    return F.normalize(t, p = 1, dim = dim)
+
+def sinkhorn_knopps(log_alpha, iters = 20):
+    assert log_alpha.shape[-2] == log_alpha.shape[-1]
+
+    dtype = log_alpha.dtype
+    log_alpha = log_alpha.float()
+
+    log_alpha = log_alpha - log_alpha.amax(dim = -2, keepdim = True).detach()
+
+    alpha = log_alpha.exp()
+
+    for _ in range(iters):
+        alpha = l1norm(alpha, dim = -2)
+        alpha = l1norm(alpha, dim = -1)
+
+    return alpha.to(dtype)
+
+def log_domain_sinkhorn_knopps(log_alpha, iters = 20):
+    assert log_alpha.shape[-2] == log_alpha.shape[-1]
+
+    dtype = log_alpha.dtype
+    log_alpha = log_alpha.float()
+
+    for _ in range(iters):
+        log_alpha = log_alpha - log_alpha.logsumexp(dim = -2, keepdim = True)
+        log_alpha = log_alpha - log_alpha.logsumexp(dim = -1, keepdim = True)
+
+    return log_alpha.exp().to(dtype)
+
+# main functions
+
+def get_expand_reduce_stream_functions(
+    num_streams,
+    add_stream_embed = False,
+    add_attn_pool_reduce_stream = False,
+    dim = None,
+    disable = False
+):
+    if disable:
+        return (nn.Identity(), nn.Identity())
+
+    if add_stream_embed or add_attn_pool_reduce_stream:
+        assert exists(dim), '`dim` must be passed into get_init_and_expand_reduce_stream_functions for returning an expansion function with stream embeddings added'
+
+    if add_stream_embed:
+        expand_fn = StreamEmbed(num_streams, dim, expand_to_streams = True)
+    else:
+        expand_fn = Reduce('... d -> ... s d', 'repeat', s = num_streams)
+
+    if add_attn_pool_reduce_stream:
+        reduce_fn = AttentionPoolReduceStream(dim)
+    else:
+        reduce_fn = Reduce('... s d -> ... d', 'sum')
+
+    return expand_fn, reduce_fn
+
+def get_init_and_expand_reduce_stream_functions(
+    num_streams,
+    num_fracs = 1,
+    dim = None,
+    add_stream_embed = False,
+    add_attn_pool_reduce_stream = False,
+    disable = None,
+    sinkhorn_iters = 20,
+    **kwargs
+):
+    disable = default(disable, num_streams == 1 and num_fracs == 1)
+
+    hyper_conn_klass = ManifoldConstrainedHyperConnections if not disable else Residual
+
+    kwargs.pop('add_attn_pool_reduce_stream', None)
+    init_hyper_conn_fn = partial(hyper_conn_klass, num_streams, num_fracs = num_fracs, sinkhorn_iters = sinkhorn_iters, **kwargs)
+    expand_reduce_fns = get_expand_reduce_stream_functions(
+        num_streams,
+        add_stream_embed = add_stream_embed,
+        add_attn_pool_reduce_stream = add_attn_pool_reduce_stream,
+        dim = dim,
+        disable = disable
+    )
+
+    if exists(dim):
+        init_hyper_conn_fn = partial(init_hyper_conn_fn, dim = dim)
+
+    return (init_hyper_conn_fn, *expand_reduce_fns)
+
+# norms
+
+class RMSNorm(Module):
+    def __init__(self, dim):
+        super().__init__()
+        self.scale = dim ** 0.5
+        self.gamma = nn.Parameter(torch.zeros(dim))
+
+    def forward(self, x):
+        return F.normalize(x, dim = -1) * self.scale * (self.gamma + 1)
+
+# main classes
+
+# residual base class
+
+class Residual(Module):
+    def __init__(
+        self,
+        *args,
+        branch: Module | None = None,
+        residual_transform: Module | None = None,
+        **kwargs
+    ):
+        super().__init__()
+        self.branch = branch
+        self.residual_transform = default(residual_transform, nn.Identity())
+
+    def width_connection(
+        self,
+        residuals
+    ):
+        return residuals, residuals, dict()
+
+    def depth_connection(
+        self,
+        branch_output,
+        residuals
+    ):
+        return branch_output + self.residual_transform(residuals)
+
+    def decorate_branch(
+        self,
+        branch: Callable
+    ):
+        assert not exists(self.branch), 'branch was already wrapped on init'
+
+        def forward_and_add_residual(residual, *args, **kwargs):
+            branch_input, add_residual = self.forward(residual)
+
+            branch_output = branch(branch_input, *args, **kwargs)
+
+            residual = add_residual(branch_output)
+
+            return residual
+
+        return forward_and_add_residual
+
+    def forward(
+        self,
+        residuals,
+        *branch_args,
+        **branch_kwargs
+    ):
+
+        branch_input, residuals, residual_kwargs = self.width_connection(residuals)
+
+        def add_residual_fn(branch_out):
+            (branch_out, *rest), tree_spec = tree_flatten(branch_out)
+
+            branch_out = self.depth_connection(branch_out, residuals, **residual_kwargs)
+
+            return tree_unflatten((branch_out, *rest), tree_spec)
+
+        if not exists(self.branch):
+            return branch_input, add_residual_fn
+
+        branch_output = self.branch(branch_input, *branch_args, **branch_kwargs)
+
+        return add_residual_fn(branch_output)
+
+# hyper connection residual streams
+
+class ManifoldConstrainedHyperConnections(Module):
+    def __init__(
+        self,
+        num_residual_streams,
+        *,
+        dim,
+        branch: Module | None = None,
+        layer_index = None,
+        dropout = 0.,
+        residual_transform: Module | None = None, # to support resnet blocks where dimension in not equal to dimension out - usually a residual conv
+        add_branch_out_to_residual = True,  # will disable depth connections (weighted residual sum with beta) if set False
+        num_input_views = 1,                # allow for the branch module to receive multiple input views, dimension placed on the very left (before batch)
+        depth_residual_fn = add,
+        num_fracs = 1,                      # https://arxiv.org/abs/2503.14125
+        sinkhorn_iters = 20,
+        log_domain_sinkhorn = False,
+        residual_mix_constraint_fn: Callable | None = None,
+        forward_method_names: tuple[str, ...] = (),
+        num_dynamic_alpha_proposals = 1,
+
+    ):
+        """
+        Appendix J, Algorithm2 in - https://arxiv.org/abs/2409.19606
+        """
+        super().__init__()
+
+        self.branch = branch
+
+        # frac-connections paper - num_fracs > 1 will be the `m` in their paper https://arxiv.org/abs/2503.14125
+
+        assert num_fracs >= 1
+
+        self.num_fracs = num_fracs
+        self.has_fracs = num_fracs > 1
+
+        self.split_fracs = Rearrange('b ... (f d) -> b ... f d', f = num_fracs)
+        self.merge_fracs = Rearrange('b ... f d -> b ... (f d)')
+
+        assert divisible_by(dim, num_fracs), f'feature dimension ({dim}) must be divisible by the `num_fracs` ({num_fracs})'
+
+        dim //= num_fracs # effective dim handled in dimension is feature dimension divided by num fractions
+
+        # they used layernorm in paper, but rmsnorm is fine given what we know now
+
+        self.norm = RMSNorm(dim)
+
+        assert num_residual_streams > 0, '`num_residual_streams` must be greater than 0'
+
+        self.num_residual_streams = num_residual_streams
+        init_residual_index = default(layer_index, randrange(num_residual_streams)) % num_residual_streams # just choose one random residual stream if layer index not given
+
+        # handle the parameter dimensions, which may require (num_residuals x num_fractions) - generalizing hyper + frac connections
+
+        num_residual_streams_fracs = num_residual_streams * num_fracs
+        num_input_views_fracs = num_input_views * num_fracs
+
+        self.num_fracs = num_fracs
+
+        # width num residual streams
+
+        assert num_input_views >= 1
+        self.num_input_views = num_input_views
+
+        # number of dynamic alpha proposals, for averaging Hres across proposals
+
+        self.has_dynamic_alpha_proposals = num_dynamic_alpha_proposals > 1
+        self.num_dynamic_alpha_proposals = num_dynamic_alpha_proposals
+
+        # width connection
+
+        init_alpha0 = torch.zeros((num_residual_streams_fracs, num_input_views_fracs))
+        init_alpha0[init_residual_index, :] = 1.
+
+        self.static_alpha = nn.Parameter(cat((init_alpha0, torch.eye(num_residual_streams_fracs)), dim = 1))
+
+        self.dynamic_alpha_fn = nn.Parameter(torch.zeros(num_dynamic_alpha_proposals, dim, num_residual_streams_fracs + num_input_views_fracs))
+
+        self.pre_branch_scale = nn.Parameter(torch.ones(1) * 1e-2)
+        self.residual_scale = nn.Parameter(torch.ones(1) * 1e-2)
+
+        # depth connection related (beta)
+
+        self.add_branch_out_to_residual = add_branch_out_to_residual
+
+        if add_branch_out_to_residual:
+            self.static_beta = nn.Parameter(torch.ones(num_residual_streams, num_fracs, 1))
+
+            self.dynamic_beta_fn = nn.Parameter(torch.zeros(dim, num_fracs))
+
+            self.h_post_scale = nn.Parameter(torch.ones(()) * 1e-2)
+
+        # Hres constraint related
+        # by default is sinkhorn
+
+        self.residual_mix_constraint_fn = default(
+            residual_mix_constraint_fn,
+            partial(sinkhorn_knopps if not log_domain_sinkhorn else log_domain_sinkhorn_knopps, iters = sinkhorn_iters)
+        )
+
+        # dropouts
+
+        self.dropout = nn.Dropout(dropout)
+
+        # maybe residual transform
+
+        self.residual_transform = default(residual_transform, nn.Identity())
+
+        # maybe custom depth connection residual function
+        # this is to prepare for gating the addition of the branch outputs to the residual streams
+        # needed for memory lanes a la RMT / LMM
+
+        self.depth_residual_fn = depth_residual_fn
+
+        # forwarding method names
+
+        self.forward_method_names = forward_method_names
+
+        for forward_method_name in self.forward_method_names:
+            assert not hasattr(self, forward_method_name)
+
+            fn = getattr(self.branch, forward_method_name)
+            setattr(self, forward_method_name, fn)
+
+    def width_connection(
+        self,
+        residuals
+    ):
+        streams, fracs = self.num_residual_streams, self.num_fracs
+
+        residuals = self.residual_transform(residuals)
+
+        # width connection
+
+        # split out fractions
+
+        residuals = self.split_fracs(residuals)
+
+        # norm
+
+        normed = self.norm(residuals)
+
+        # alpha for weighted sum of residuals going into branch
+
+        dtype = residuals.dtype
+
+        normed = normed.float()
+
+        wc_weight = einsum(normed, self.dynamic_alpha_fn.float(), '... d, p d mix -> p ... mix')
+        wc_weight = rearrange(wc_weight, '... s1 f2 mix -> ... (s1 f2) mix')
+
+        pre_branch_scale = repeat(self.pre_branch_scale.float(), '1 -> s', s = self.num_fracs)
+        residual_scale = repeat(self.residual_scale.float(), '1 -> s', s = self.num_fracs * streams)
+        alpha_scale = cat((pre_branch_scale, residual_scale))
+
+        alpha_scale = repeat(alpha_scale, 'n -> (v n)', v = self.num_input_views)
+
+        dynamic_alpha = wc_weight * alpha_scale
+
+        alpha = dynamic_alpha + self.static_alpha.float()
+
+        # the alpha is now split and "manifold constrained" with sinkhorn and sigmoid
+
+        alpha_pre, alpha_residual = alpha[..., :self.num_input_views * self.num_fracs], alpha[..., self.num_input_views * self.num_fracs:]
+
+        alpha_pre = alpha_pre.sigmoid()
+
+        alpha_residual = self.residual_mix_constraint_fn(alpha_residual)
+
+        alpha = cat((alpha_pre, alpha_residual), dim = -1)
+
+        if self.has_dynamic_alpha_proposals:
+            alpha = reduce(alpha, 'p ... -> ...', 'mean')
+        else:
+            alpha = rearrange(alpha, '1 ... -> ...')
+
+        alpha = rearrange(alpha, '... (s f) t -> ... s f t', s = streams) # (batch, seq, fracs1, streams, fracs2, input + residual streams)
+
+        # beta for weights from branch output back to residual streams
+
+        beta = None
+
+        if self.add_branch_out_to_residual:
+            dc_weight = normed @ self.dynamic_beta_fn.float()
+
+            dynamic_beta = dc_weight * self.h_post_scale.float()
+
+            beta = dynamic_beta + self.static_beta.float()
+
+            beta = beta.sigmoid() * 2 # for "H_post" manifold constraint
+
+        mix_h = einsum(alpha, residuals.float(), '... s f tf, ... s f d -> ... tf d')
+
+        mix_h = rearrange(mix_h, '... (t f) d -> ... t f d', f = fracs)
+
+        if self.num_input_views == 1:
+            branch_input, residuals = mix_h[..., 0, :, :], mix_h[..., 1:, :, :]
+        else:
+            branch_input, residuals = mix_h[..., :self.num_input_views, :, :], mix_h[..., self.num_input_views:, :, :]
+            branch_input = rearrange(branch_input, 'b ... v f d -> v b ... f d')
+
+        # maybe merge fractions back
+
+        branch_input = self.merge_fracs(branch_input)
+
+        residuals = rearrange(residuals, 'b ... s f d -> b ... s (f d)')
+
+        branch_input, residuals = tuple(t.to(dtype) for t in (branch_input, residuals))
+
+        if exists(beta):
+            beta = beta.to(dtype)
+
+        return branch_input, residuals, dict(beta = beta)
+
+    def depth_connection(
+        self,
+        branch_output,
+        residuals,
+        *,
+        beta
+    ):
+        assert self.add_branch_out_to_residual
+
+        # maybe split fractions
+
+        branch_output = self.split_fracs(branch_output)
+
+        # 'depth' connection
+
+        dtype = residuals.dtype
+
+        output = einsum(branch_output.float(), beta.float(), 'b ... f1 d, b ... s f1 f2 -> b ... s f2 d')
+
+        # merge merge back fractions
+
+        output = self.merge_fracs(output)
+
+        # channel first
+
+        residuals = self.depth_residual_fn(output.to(dtype), residuals)
+
+        return self.dropout(residuals)
+
+    def decorate_branch(
+        self,
+        branch: Callable
+    ):
+        assert not exists(self.branch), 'branch was already wrapped on init'
+
+        def forward_and_add_residual(residual, *args, **kwargs):
+            branch_input, add_residual = self.forward(residual)
+
+            branch_output = branch(branch_input, *args, **kwargs)
+
+            residual = add_residual(branch_output)
+
+            return residual
+
+        return forward_and_add_residual
+
+    def forward(
+        self,
+        residuals,
+        *branch_args,
+        **branch_kwargs
+    ):
+
+        branch_input, residuals, residual_kwargs = self.width_connection(residuals)
+
+        def add_residual_fn(branch_out):
+
+            if not self.add_branch_out_to_residual:
+                return branch_out
+
+            (branch_out, *rest), tree_spec = tree_flatten(branch_out)
+
+            branch_out = self.depth_connection(branch_out, residuals, **residual_kwargs)
+
+            return tree_unflatten((branch_out, *rest), tree_spec)
+
+        if not exists(self.branch):
+            return branch_input, add_residual_fn
+
+        branch_output = self.branch(branch_input, *branch_args, **branch_kwargs)
+
+        return add_residual_fn(branch_output)
+
+mHC = ManifoldConstrainedHyperConnections
+
+ManifoldConstrainedHyperConnections.get_expand_reduce_stream_functions = staticmethod(get_expand_reduce_stream_functions)
+ManifoldConstrainedHyperConnections.get_init_and_expand_reduce_stream_functions = staticmethod(get_init_and_expand_reduce_stream_functions)
+
+# stream embed
+
+class StreamEmbed(Module):
+    def __init__(
+        self,
+        num_streams,
+        dim,
+        expand_to_streams = False
+    ):
+        super().__init__()
+        self.num_streams = num_streams
+
+        self.expand_to_streams = expand_to_streams
+        self.stream_embed = nn.Parameter(torch.zeros(num_streams, dim))
+
+    def forward(self, residuals):
+
+        if self.expand_to_streams:
+            residuals = repeat(residuals, '... d -> ... s d', s = self.num_streams)
+
+        return residuals + self.stream_embed
+
+# attention pool - taken from Enformer https://www.nature.com/articles/s41592-021-01252-x , in turn taken from somewhere else
+
+class AttentionPoolReduceStream(Module):
+    def __init__(self, dim):
+        super().__init__()
+        self.to_attn_logits = nn.Linear(dim, dim, bias = False)
+        self.to_attn_logits.weight.data.copy_(torch.eye(dim))
+
+    def forward(self, residuals):
+
+        attn_logits = self.to_attn_logits(residuals)
+        attn = attn_logits.softmax(dim = -2)
+
+        return einsum(residuals, attn, '... s d, ... s d -> ... d')

hyper_connections/manifold_constrained_hyper_connections.py

@@ -78,7 +78,7 @@ def get_expand_reduce_stream_functions(
     dim = None,
     disable = False
 ):
-    if num_streams == 1 or disable:
+    if disable:
         return (nn.Identity(), nn.Identity())
 
     if add_stream_embed:

{hyper_connections-0.4.2.dist-info → hyper_connections-0.4.3.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: hyper-connections
-Version: 0.4.2
+Version: 0.4.3
 Summary: Hyper-Connections
 Project-URL: Homepage, https://pypi.org/project/hyper-connections/
 Project-URL: Repository, https://github.com/lucidrains/hyper-connections
@@ -34,8 +34,8 @@ Classifier: License :: OSI Approved :: MIT License
 Classifier: Programming Language :: Python :: 3.9
 Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
 Requires-Python: >=3.9
-Requires-Dist: einops>=0.8.0
-Requires-Dist: torch>=2.3
+Requires-Dist: einops>=0.8.1
+Requires-Dist: torch>=2.5
 Provides-Extra: examples
 Description-Content-Type: text/markdown
 

hyper_connections-0.4.3.dist-info/RECORD

@@ -0,0 +1,13 @@
+hyper_connections/__init__.py,sha256=BAGwi53ozXcnfPJAGur0RHA4vcolF1ORBhbZ9a8SkrE,602
+hyper_connections/hyper_connections.py,sha256=2F-104cGE82KCK0KeC07NSOJNPT-0PCtvX3xKzAF40E,14884
+hyper_connections/hyper_connections_channel_first.py,sha256=5vAen4WXxNI9K07ndLBQJwdJv-OjoXznta5EIQTaQNA,6512
+hyper_connections/hyper_connections_with_multi_branch_inputs.py,sha256=yn2AlFB6qCYQeRhhhaMlCM3mxxLEdWCYwU2p9TsMwWI,7835
+hyper_connections/hyper_connections_with_multi_input_streams.py,sha256=iFPw5pgCRHTo16nBJ2PExKSrvTyCh7ba7Py14P1oSPE,11311
+hyper_connections/mHCv2.py,sha256=j3A4XbisBXzqdW9vYCrPRrK2M6iPAqMOjxGCj3lsQ-g,16810
+hyper_connections/manifold_constrained_hyper_connections.py,sha256=rQzAIkP84adzEVyrMasqMuZV76-6LAioUbwKnABcBto,18315
+hyper_connections/residuals.py,sha256=JVSFJj_H7xQ3_Fd-pZH5Hdv9SveAQu29jQNvMyom5ek,921
+hyper_connections/vit.py,sha256=BOWVfCAIzDQdnTq8OBzNUyiKGGILYZkIQ6mr1GKJVB0,5225
+hyper_connections-0.4.3.dist-info/METADATA,sha256=h_zeG-qAgyg-vDktRMaPpGuYzmA-kxrcUmPvVQ4CYvs,6704
+hyper_connections-0.4.3.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
+hyper_connections-0.4.3.dist-info/licenses/LICENSE,sha256=E7RGS7kpJIStk5za_-4DVhWEAamf65EU0CNML25mq4c,1066
+hyper_connections-0.4.3.dist-info/RECORD,,

hyper_connections-0.4.2.dist-info/RECORD

@@ -1,12 +0,0 @@
-hyper_connections/__init__.py,sha256=BAGwi53ozXcnfPJAGur0RHA4vcolF1ORBhbZ9a8SkrE,602
-hyper_connections/hyper_connections.py,sha256=rqFJj3U0LF3uDKNKNPBpRrmf0oa2BGWVbD6S-xdZdLo,14904
-hyper_connections/hyper_connections_channel_first.py,sha256=Mh_hzhTi96ZoOPmhSKwUaF4TbHpNqhs83wNe5hNuL7o,6532
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