hydraflow 0.2.1__py3-none-any.whl → 0.2.2__py3-none-any.whl

hydraflow/__init__.py

@@ -2,18 +2,19 @@ from .context import Info, chdir_artifact, log_run, watch
 from .mlflow import set_experiment
 from .runs import (
     Run,
-    Runs,
+    RunCollection,
     filter_runs,
     get_param_dict,
     get_param_names,
     get_run,
     load_config,
+    search_runs,
 )
 
 __all__ = [
     "Info",
     "Run",
-    "Runs",
+    "RunCollection",
     "chdir_artifact",
     "filter_runs",
     "get_param_dict",
@@ -21,6 +22,7 @@ __all__ = [
     "get_run",
     "load_config",
     "log_run",
+    "search_runs",
     "set_experiment",
     "watch",
 ]

hydraflow/config.py

@@ -30,6 +30,9 @@ def iter_params(config: object, prefix: str = "") -> Iterator[tuple[str, Any]]:
     Yields:
         Key-value pairs representing the parameters in the configuration object.
     """
+    if config is None:
+        return
+
     if not isinstance(config, (DictConfig, ListConfig)):
         config = OmegaConf.create(config)  # type: ignore
 

hydraflow/runs.py

@@ -1,7 +1,7 @@
 """
 This module provides functionality for managing and interacting with MLflow runs.
-It includes the `Runs` class and various methods to filter runs, retrieve run information,
-log artifacts, and load configurations.
+It includes the `RunCollection` class and various methods to filter runs,
+retrieve run information, log artifacts, and load configurations.
 """
 
 from __future__ import annotations
@@ -9,9 +9,10 @@ from __future__ import annotations
 from dataclasses import dataclass
 from functools import cache
 from itertools import chain
-from typing import TYPE_CHECKING, Any
+from typing import TYPE_CHECKING, Any, TypeVar
 
 import mlflow
+from mlflow.artifacts import download_artifacts
 from mlflow.entities import ViewType
 from mlflow.entities.run import Run
 from mlflow.tracking.fluent import SEARCH_MAX_RESULTS_PANDAS
@@ -20,6 +21,7 @@ from omegaconf import DictConfig, OmegaConf
 from hydraflow.config import iter_params
 
 if TYPE_CHECKING:
+    from collections.abc import Callable, Iterator
     from typing import Any
 
 
@@ -31,14 +33,17 @@ def search_runs(
     order_by: list[str] | None = None,
     search_all_experiments: bool = False,
     experiment_names: list[str] | None = None,
-) -> Runs:
+) -> RunCollection:
     """
     Search for Runs that fit the specified criteria.
 
     This function wraps the `mlflow.search_runs` function and returns the results
-    as a `Runs` object. It allows for flexible searching of MLflow runs based on
+    as a `RunCollection` object. It allows for flexible searching of MLflow runs based on
     various criteria.
 
+    Note:
+        The returned runs are sorted by their start time in ascending order.
+
     Args:
         experiment_ids: List of experiment IDs. Search can work with experiment IDs or
             experiment names, but not both in the same call. Values other than
@@ -53,9 +58,6 @@ def search_runs(
         order_by: List of columns to order by (e.g., "metrics.rmse"). The ``order_by`` column
             can contain an optional ``DESC`` or ``ASC`` value. The default is ``ASC``.
             The default ordering is to sort by ``start_time DESC``, then ``run_id``.
-        output_format: The output format to be returned. If ``pandas``, a ``pandas.DataFrame``
-            is returned and, if ``list``, a list of :py:class:`mlflow.entities.Run`
-            is returned.
         search_all_experiments: Boolean specifying whether all experiments should be searched.
             Only honored if ``experiment_ids`` is ``[]`` or ``None``.
         experiment_names: List of experiment names. Search can work with experiment IDs or
@@ -65,7 +67,7 @@ def search_runs(
             experiment if ``experiment_ids`` is ``None`` or ``[]``.
 
     Returns:
-        A `Runs` object containing the search results.
+        A `RunCollection` object containing the search results.
     """
     runs = mlflow.search_runs(
         experiment_ids=experiment_ids,
@@ -77,11 +79,44 @@ def search_runs(
         search_all_experiments=search_all_experiments,
         experiment_names=experiment_names,
     )
-    return Runs(runs)  # type: ignore
+    runs = sorted(runs, key=lambda run: run.info.start_time)  # type: ignore
+    return RunCollection(runs)  # type: ignore
+
+
+def list_runs(experiment_names: list[str] | None = None) -> RunCollection:
+    """
+    List all runs for the specified experiments.
+
+    This function retrieves all runs for the given list of experiment names.
+    If no experiment names are provided (None), it defaults to searching all runs
+    for the currently active experiment. If an empty list is provided, the function
+    will search all runs for all experiments except the "Default" experiment.
+    The function returns the results as a `RunCollection` object.
+
+    Note:
+        The returned runs are sorted by their start time in ascending order.
+
+    Args:
+        experiment_names: List of experiment names to search for runs.
+        If None or an empty list is provided, the function will search
+        the currently active experiment or all experiments except the
+        "Default" experiment.
+
+    Returns:
+        A `RunCollection` object containing the runs for the specified experiments.
+    """
+    if experiment_names == []:
+        experiments = mlflow.search_experiments()
+        experiment_names = [e.name for e in experiments if e.name != "Default"]
+
+    return search_runs(experiment_names=experiment_names)
+
+
+T = TypeVar("T")
 
 
 @dataclass
-class Runs:
+class RunCollection:
     """
     A class to represent a collection of MLflow runs.
 
@@ -89,83 +124,109 @@ class Runs:
     retrieving specific runs, and accessing run information.
     """
 
-    runs: list[Run]
+    _runs: list[Run]
+    """A list of MLflow Run objects."""
 
     def __repr__(self) -> str:
         return f"{self.__class__.__name__}({len(self)})"
 
     def __len__(self) -> int:
-        return len(self.runs)
+        return len(self._runs)
 
-    def filter(self, config: object) -> Runs:
+    def filter(self, config: object | None = None, **kwargs) -> RunCollection:
         """
         Filter the runs based on the provided configuration.
 
         This method filters the runs in the collection according to the
-        specified configuration object. The configuration object should
-        contain key-value pairs that correspond to the parameters of the
-        runs. Only the runs that match all the specified parameters will
-        be included in the returned `Runs` object.
+        specified configuration object and additional key-value pairs.
+        The configuration object and key-value pairs should contain
+        key-value pairs that correspond to the parameters of the runs.
+        Only the runs that match all the specified parameters will be
+        included in the returned `RunCollection` object.
+
+        The filtering supports:
+        - Exact matches for single values.
+        - Membership checks for lists of values.
+        - Range checks for tuples of two values (inclusive of the lower bound and
+          exclusive of the upper bound).
 
         Args:
-            config: The configuration object to filter the runs.
+            config: The configuration object to filter the runs. This can be any
+                object that provides key-value pairs through the `iter_params`
+                function.
+            **kwargs: Additional key-value pairs to filter the runs.
 
         Returns:
-            A new `Runs` object containing the filtered runs.
+            A new `RunCollection` object containing the filtered runs.
         """
-        return Runs(filter_runs(self.runs, config))
+        return RunCollection(filter_runs(self._runs, config, **kwargs))
 
-    def get(self, config: object) -> Run | None:
+    def find(self, config: object | None = None, **kwargs) -> Run | None:
         """
-        Retrieve a specific run based on the provided configuration.
+        Find the first run based on the provided configuration.
 
         This method filters the runs in the collection according to the
-        specified configuration object and returns the run that matches
-        the provided parameters. If more than one run matches the criteria,
-        a `ValueError` is raised.
+        specified configuration object and returns the first run that matches
+        the provided parameters. If no run matches the criteria, None is returned.
 
         Args:
             config: The configuration object to identify the run.
+            **kwargs: Additional key-value pairs to filter the runs.
 
         Returns:
-            Run: The run object that matches the provided configuration.
-            None, if the runs are not in a DataFrame format.
+            The first run object that matches the provided configuration, or None
+            if no runs match the criteria.
 
-        Raises:
-            ValueError: If the number of filtered runs is not exactly one.
+        See Also:
+            RunCollection.filter: The method that performs the actual filtering logic.
         """
-        return get_run(self.runs, config)
+        return find_run(self._runs, config, **kwargs)
 
-    def get_earliest_run(self, config: object | None = None, **kwargs) -> Run | None:
+    def find_last(self, config: object | None = None, **kwargs) -> Run | None:
         """
-        Get the earliest run from the list of runs based on the start time.
+        Find the last run based on the provided configuration.
 
-        This method filters the runs based on the configuration if provided
-        and returns the run with the earliest start time.
+        This method filters the runs in the collection according to the
+        specified configuration object and returns the last run that matches
+        the provided parameters. If no run matches the criteria, None is returned.
 
         Args:
-            config: The configuration object to filter the runs.
-                If None, no filtering is applied.
+            config: The configuration object to identify the run.
             **kwargs: Additional key-value pairs to filter the runs.
 
         Returns:
-            The run with the earliest start time, or None if no runs match the criteria.
+            The last run object that matches the provided configuration, or None
+            if no runs match the criteria.
+
+        See Also:
+            RunCollection.filter: The method that performs the actual filtering logic.
         """
-        return get_earliest_run(self.runs, config, **kwargs)
+        return find_last_run(self._runs, config, **kwargs)
 
-    def get_latest_run(self, config: object | None = None, **kwargs) -> Run | None:
+    def get(self, config: object | None = None, **kwargs) -> Run | None:
         """
-        Get the latest run from the list of runs based on the start time.
+        Retrieve a specific run based on the provided configuration.
+
+        This method filters the runs in the collection according to the
+        specified configuration object and returns the run that matches
+        the provided parameters. If more than one run matches the criteria,
+        a `ValueError` is raised.
 
         Args:
-            config: The configuration object to filter the runs.
-                If None, no filtering is applied.
+            config: The configuration object to identify the run.
             **kwargs: Additional key-value pairs to filter the runs.
 
         Returns:
-            The run with the latest start time, or None if no runs match the criteria.
+            The run object that matches the provided configuration, or None
+            if no runs match the criteria.
+
+        Raises:
+            ValueError: If more than one run matches the criteria.
+
+        See Also:
+            RunCollection.filter: The method that performs the actual filtering logic.
         """
-        return get_latest_run(self.runs, config, **kwargs)
+        return get_run(self._runs, config, **kwargs)
 
     def get_param_names(self) -> list[str]:
         """
@@ -178,7 +239,7 @@ class Runs:
         Returns:
             A list of unique parameter names.
         """
-        return get_param_names(self.runs)
+        return get_param_names(self._runs)
 
     def get_param_dict(self) -> dict[str, list[str]]:
         """
@@ -193,29 +254,164 @@ class Runs:
             A dictionary where the keys are parameter names and the values are lists
             of parameter values.
         """
-        return get_param_dict(self.runs)
+        return get_param_dict(self._runs)
+
+    def first(self) -> Run | None:
+        """
+        Return the first run in the collection.
+
+        Returns:
+            The first Run object if the collection is not empty, otherwise None.
+        """
+        return self._runs[0] if self._runs else None
+
+    def last(self) -> Run | None:
+        """
+        Return the last run in the collection.
+
+        Returns:
+            The last Run object if the collection is not empty, otherwise None.
+        """
+        return self._runs[-1] if self._runs else None
+
+    def map(self, func: Callable[[Run], T]) -> Iterator[T]:
+        """
+        Apply a function to each run in the collection and return an iterator of results.
+
+        Args:
+            func: A function that takes a Run object and returns a result.
+
+        Returns:
+            An iterator of results obtained by applying the function to each run
+            in the collection.
+        """
+        return (func(run) for run in self._runs)
+
+    def map_run_id(self, func: Callable[[str], T]) -> Iterator[T]:
+        """
+        Apply a function to each run id in the collection and return an iterator of results.
+
+        Args:
+            func: A function that takes a run id and returns a result.
+
+        Returns:
+            An iterator of results obtained by applying the function to each run id
+            in the collection.
+        """
+        return (func(run.info.run_id) for run in self._runs)
+
+    def map_config(self, func: Callable[[DictConfig], T]) -> Iterator[T]:
+        """
+        Apply a function to each run config in the collection and return an iterator of results.
+
+        Args:
+            func: A function that takes a run config and returns a result.
+
+        Returns:
+            An iterator of results obtained by applying the function to each run config
+            in the collection.
+        """
+        return (func(load_config(run)) for run in self._runs)
+
+    def map_uri(self, func: Callable[[str | None], T]) -> Iterator[T]:
+        """
+        Apply a function to each artifact URI in the collection and return an iterator of results.
+
+        This method iterates over each run in the collection, retrieves the artifact URI,
+        and applies the provided function to it. If a run does not have an artifact URI,
+        None is passed to the function.
+
+        Args:
+            func: A function that takes an artifact URI (string or None) and returns a result.
+
+        Yields:
+            The results obtained by applying the function to each artifact URI in the collection.
+        """
+        return (func(run.info.artifact_uri) for run in self._runs)
+
+    def map_dir(self, func: Callable[[str], T]) -> Iterator[T]:
+        """
+        Apply a function to each artifact directory in the collection and return an iterator of results.
+
+        This method iterates over each run in the collection, downloads the artifact directory,
+        and applies the provided function to the directory path.
+
+        Args:
+            func: A function that takes an artifact directory path (string) and returns a result.
+
+        Returns:
+            An iterator of results obtained by applying the function to each artifact directory
+            in the collection.
+        """
+        return (func(download_artifacts(run_id=run.info.run_id)) for run in self._runs)
+
+
+def _param_matches(run: Run, key: str, value: Any) -> bool:
+    """
+    Check if the run's parameter matches the specified key-value pair.
+
+    This function checks if the run's parameters contain the specified key-value pair.
+    It handles different types of values, including lists and tuples.
+
+    Args:
+        run: The run object to check.
+        key: The parameter key to check.
+        value: The parameter value to check.
+
+    Returns:
+        True if the run's parameter matches the specified key-value pair, False otherwise.
+    """
+    param = run.data.params.get(key, value)
+
+    # FIXME: This is a workaround to handle the case where the parameter value is a list
+    #        We need to improve the logic to handle different types of values
+    #        For now, we assume that if the parameter is a list, we should check if it contains the value
+    #        This is not ideal, but it works for the case where the parameter value is a list of strings
+    #        We should improve the logic to handle different types of values in the future
+
+    if param is None:
+        return False
+
+    if param == "None":
+        return value is None
 
+    if isinstance(value, list) and value:
+        return type(value[0])(param) in value
 
-def filter_runs(runs: list[Run], config: object, **kwargs) -> list[Run]:
+    if isinstance(value, tuple) and len(value) == 2:
+        return value[0] <= type(value[0])(param) < value[1]
+
+    return type(value)(param) == value
+
+
+def filter_runs(runs: list[Run], config: object | None = None, **kwargs) -> list[Run]:
     """
     Filter the runs based on the provided configuration.
 
     This method filters the runs in the collection according to the
-    specified configuration object. The configuration object should
-    contain key-value pairs that correspond to the parameters of the
-    runs. Only the runs that match all the specified parameters will
-    be included in the returned list of runs.
+    specified configuration object and additional key-value pairs.
+    The configuration object and key-value pairs should contain
+    key-value pairs that correspond to the parameters of the runs.
+    Only the runs that match all the specified parameters will be
+    included in the returned list of runs.
+
+    The filtering supports:
+    - Exact matches for single values.
+    - Membership checks for lists of values.
+    - Range checks for tuples of two values (inclusive of the lower bound and
+      exclusive of the upper bound).
 
     Args:
-        runs: The runs to filter.
-        config: The configuration object to filter the runs.
+        runs: The list of runs to filter.
+        config: The configuration object to filter the runs. This can be any object that
+                provides key-value pairs through the `iter_params` function.
         **kwargs: Additional key-value pairs to filter the runs.
 
     Returns:
-        A filtered list of runs.
+        A list of runs that match the specified configuration and key-value pairs.
     """
     for key, value in chain(iter_params(config), kwargs.items()):
-        runs = [run for run in runs if _is_equal(run, key, value)]
+        runs = [run for run in runs if _param_matches(run, key, value)]
 
         if len(runs) == 0:
             return []
@@ -223,23 +419,13 @@ def filter_runs(runs: list[Run], config: object, **kwargs) -> list[Run]:
     return runs
 
 
-def _is_equal(run: Run, key: str, value: Any) -> bool:
-    param = run.data.params.get(key, value)
-
-    if param is None:
-        return False
-
-    return type(value)(param) == value
-
-
-def get_run(runs: list[Run], config: object, **kwargs) -> Run | None:
+def find_run(runs: list[Run], config: object | None = None, **kwargs) -> Run | None:
     """
-    Retrieve a specific run based on the provided configuration.
+    Find the first run based on the provided configuration.
 
     This method filters the runs in the collection according to the
-    specified configuration object and returns the run that matches
-    the provided parameters. If more than one run matches the criteria,
-    a `ValueError` is raised.
+    specified configuration object and returns the first run that matches
+    the provided parameters. If no run matches the criteria, None is returned.
 
     Args:
         runs: The runs to filter.
@@ -247,66 +433,65 @@ def get_run(runs: list[Run], config: object, **kwargs) -> Run | None:
         **kwargs: Additional key-value pairs to filter the runs.
 
     Returns:
-        The run object that matches the provided configuration, or None
+        The first run object that matches the provided configuration, or None
         if no runs match the criteria.
-
-    Raises:
-        ValueError: If more than one run matches the criteria.
     """
     runs = filter_runs(runs, config, **kwargs)
+    return runs[0] if runs else None
 
-    if len(runs) == 0:
-        return None
-
-    if len(runs) == 1:
-        return runs[0]
-
-    msg = f"Multiple runs were filtered. Expected number of runs is 1, but found {len(runs)} runs."
-    raise ValueError(msg)
 
-
-def get_earliest_run(runs: list[Run], config: object | None = None, **kwargs) -> Run | None:
+def find_last_run(runs: list[Run], config: object | None = None, **kwargs) -> Run | None:
     """
-    Get the earliest run from the list of runs based on the start time.
+    Find the last run based on the provided configuration.
 
-    This method filters the runs based on the configuration if provided
-    and returns the run with the earliest start time.
+    This method filters the runs in the collection according to the
+    specified configuration object and returns the last run that matches
+    the provided parameters. If no run matches the criteria, None is returned.
 
     Args:
-        runs: The list of runs.
-        config: The configuration object to filter the runs.
-            If None, no filtering is applied.
+        runs: The runs to filter.
+        config: The configuration object to identify the run.
         **kwargs: Additional key-value pairs to filter the runs.
 
     Returns:
-        The run with the earliest start time, or None if no runs match the criteria.
+        The last run object that matches the provided configuration, or None
+        if no runs match the criteria.
     """
-    if config is not None or kwargs:
-        runs = filter_runs(runs, config or {}, **kwargs)
-
-    return min(runs, key=lambda run: run.info.start_time, default=None)
+    runs = filter_runs(runs, config, **kwargs)
+    return runs[-1] if runs else None
 
 
-def get_latest_run(runs: list[Run], config: object | None = None, **kwargs) -> Run | None:
+def get_run(runs: list[Run], config: object | None = None, **kwargs) -> Run | None:
     """
-    Get the latest run from the list of runs based on the start time.
+    Retrieve a specific run based on the provided configuration.
 
-    This method filters the runs based on the configuration if provided
-    and returns the run with the latest start time.
+    This method filters the runs in the collection according to the
+    specified configuration object and returns the run that matches
+    the provided parameters. If more than one run matches the criteria,
+    a `ValueError` is raised.
 
     Args:
-        runs: The list of runs.
-        config: The configuration object to filter the runs.
-            If None, no filtering is applied.
+        runs: The runs to filter.
+        config: The configuration object to identify the run.
         **kwargs: Additional key-value pairs to filter the runs.
 
     Returns:
-        The run with the latest start time, or None if no runs match the criteria.
+        The run object that matches the provided configuration, or None
+        if no runs match the criteria.
+
+    Raises:
+        ValueError: If more than one run matches the criteria.
     """
-    if config is not None or kwargs:
-        runs = filter_runs(runs, config or {}, **kwargs)
+    runs = filter_runs(runs, config, **kwargs)
 
-    return max(runs, key=lambda run: run.info.start_time, default=None)
+    if len(runs) == 0:
+        return None
+
+    if len(runs) == 1:
+        return runs[0]
+
+    msg = f"Multiple runs were filtered. Expected number of runs is 1, but found {len(runs)} runs."
+    raise ValueError(msg)
 
 
 def get_param_names(runs: list[Run]) -> list[str]:
@@ -363,13 +548,15 @@ def load_config(run: Run) -> DictConfig:
 
     This function loads the configuration for the provided Run instance
     by downloading the configuration file from the MLflow artifacts and
-    loading it using OmegaConf.
+    loading it using OmegaConf. It returns an empty config if
+    `.hydra/config.yaml` is not found in the run's artifact directory.
 
     Args:
-        run: The Run instance to load the configuration for.
+        run: The Run instance for which to load the configuration.
 
     Returns:
-        The loaded configuration.
+        The loaded configuration as a DictConfig object. Returns an empty
+        DictConfig if the configuration file is not found.
     """
     run_id = run.info.run_id
     return _load_config(run_id)
@@ -378,10 +565,7 @@ def load_config(run: Run) -> DictConfig:
 @cache
 def _load_config(run_id: str) -> DictConfig:
     try:
-        path = mlflow.artifacts.download_artifacts(
-            run_id=run_id,
-            artifact_path=".hydra/config.yaml",
-        )
+        path = download_artifacts(run_id=run_id, artifact_path=".hydra/config.yaml")
     except OSError:
         return DictConfig({})
 

{hydraflow-0.2.1.dist-info → hydraflow-0.2.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: hydraflow
-Version: 0.2.1
+Version: 0.2.2
 Summary: Hydraflow integrates Hydra and MLflow to manage and track machine learning experiments.
 Project-URL: Documentation, https://github.com/daizutabi/hydraflow
 Project-URL: Source, https://github.com/daizutabi/hydraflow
@@ -46,14 +46,23 @@ Description-Content-Type: text/markdown
 
 ## Overview
 
-Hydraflow is a powerful library designed to seamlessly integrate [Hydra](https://hydra.cc/) and [MLflow](https://mlflow.org/), making it easier to manage and track machine learning experiments. By combining the flexibility of Hydra's configuration management with the robust experiment tracking capabilities of MLflow, Hydraflow provides a comprehensive solution for managing complex machine learning workflows.
+Hydraflow is a powerful library designed to seamlessly integrate
+[Hydra](https://hydra.cc/) and [MLflow](https://mlflow.org/), making it easier to
+manage and track machine learning experiments. By combining the flexibility of
+Hydra's configuration management with the robust experiment tracking capabilities
+of MLflow, Hydraflow provides a comprehensive solution for managing complex
+machine learning workflows.
 
 ## Key Features
 
-- **Configuration Management**: Utilize Hydra's advanced configuration management to handle complex parameter sweeps and experiment setups.
-- **Experiment Tracking**: Leverage MLflow's tracking capabilities to log parameters, metrics, and artifacts for each run.
-- **Artifact Management**: Automatically log and manage artifacts, such as model checkpoints and configuration files, with MLflow.
-- **Seamless Integration**: Easily integrate Hydra and MLflow in your machine learning projects with minimal setup.
+- **Configuration Management**: Utilize Hydra's advanced configuration management
+  to handle complex parameter sweeps and experiment setups.
+- **Experiment Tracking**: Leverage MLflow's tracking capabilities to log parameters,
+  metrics, and artifacts for each run.
+- **Artifact Management**: Automatically log and manage artifacts, such as model
+  checkpoints and configuration files, with MLflow.
+- **Seamless Integration**: Easily integrate Hydra and MLflow in your machine learning
+  projects with minimal setup.
 
 ## Installation
 

hydraflow-0.2.2.dist-info/RECORD

@@ -0,0 +1,9 @@
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hydraflow-0.2.1.dist-info/RECORD

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