howso-visuals 2.2.1__py3-none-any.whl → 2.3.0__py3-none-any.whl

howso/visuals/graph.py

@@ -1,4 +1,4 @@
-from collections.abc import Callable, Mapping
+from collections.abc import Callable, Collection, Mapping
 from typing import Any, SupportsInt, TypeAlias
 
 import networkx as nx
@@ -15,6 +15,8 @@ def _create_edge_annotations(
     edge_attr: str | None = None,
     edge_attr_sigfigs: SupportsInt | None = 4,
     label_edges: bool = True,
+    uncertain_edges: Collection[tuple[str, str]] | None = None,
+    uncertain_edge_opacity: float = 0.3,
 ) -> tuple[list[go.layout.Annotation], list[dict[str, Any]]]:
     # Annotations are created to show the edges between nodes,
     # while invisible shapes with labels are created to label them with the edge weight.
@@ -46,6 +48,12 @@ def _create_edge_annotations(
             arrowside = "none"
         else:
             arrowside = "end"
+        
+        if uncertain_edges and ((s, d) in uncertain_edges or (d, s) in uncertain_edges):
+            opacity = uncertain_edge_opacity
+            arrowside = "none"
+        else:
+            opacity = 0.8
 
         annotations.append(
             go.layout.Annotation(
@@ -63,7 +71,7 @@ def _create_edge_annotations(
                 startstandoff=37.5,
                 arrowside=arrowside,
                 arrowwidth=width,
-                opacity=0.8,
+                opacity=opacity,
                 captureevents=True,
             )
         )
@@ -111,6 +119,8 @@ def plot_graph(
     node_color: list[float] | None = None,
     subtitle: str | None = None,
     title: str = "Causal Graph",
+    uncertain_edges: Collection[tuple[str, str]] | None = None,
+    uncertain_edge_opacity: float = 0.3,
 ) -> go.Figure:
     """
     Plot a ``networkx`` graph using `Plotly`.
@@ -133,10 +143,15 @@ def plot_graph(
         A callable which generates a mapping of nodes to ``(x, y)`` coordinates.
     node_color : list[float], optional
         The data to use when determining the color for each node.
-    title : str, default "Causal Graph"
-        The title of the plot.
     subtitle : str, optional
         The subtitle of the plot.
+    title : str, default "Causal Graph"
+        The title of the plot.
+    uncertain_edges : Collection[tuple[str, str]], optional
+        Edges that are deemed uncertain by the caller. These will be plotted with an opacity equal to
+        ``uncertain_edge_opacity`` and will not have directional arrows.
+    uncertain_edge_opacity : float, default 0.3
+        The opacity use when plotting edges contained in ``uncertain_edges``.
 
     Returns
     -------
@@ -187,6 +202,8 @@ def plot_graph(
         edge_attr=edge_attr,
         edge_attr_sigfigs=edge_attr_sigfigs,
         label_edges=label_edges,
+        uncertain_edges=uncertain_edges,
+        uncertain_edge_opacity=uncertain_edge_opacity,
         )
     fig = go.Figure(
         layout=go.Layout(

howso/visuals/tests/test_plot.py

@@ -62,7 +62,7 @@ def test_plot_interpretable_prediction_react(
     if do_residual:
         residual = iris_trainee.react_aggregate(
             details={"prediction_stats": True, "selected_prediction_stats": ["mae"]}
-        )
+        ).to_dataframe()
         residual = residual[action_feature].iloc[0]
     else:
         residual = None

howso/visuals/visuals.py

@@ -870,7 +870,7 @@ def plot_umap(
             details={"feature_full_residuals": True},
             use_case_weights=use_case_weights,
             weight_feature=weight_feature,
-        )
+        ).to_dataframe()
         min_dist = float((residuals.values**p).sum() ** (1 / p))
         min_dist = min(round(min_dist, 3), 1)
 

{howso_visuals-2.2.1.dist-info → howso_visuals-2.3.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: howso-visuals
-Version: 2.2.1
+Version: 2.3.0
 Summary: Visualization utilities for use with Howso Engine.
 License: GNU AFFERO GENERAL PUBLIC LICENSE
            Version 3, 19 November 2007
@@ -675,7 +675,7 @@ Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 License-File: LICENSE-3RD-PARTY.txt
 License-File: LICENSE.txt
-Requires-Dist: howso-engine>=44.0
+Requires-Dist: howso-engine>=45.0
 Requires-Dist: networkx
 Requires-Dist: plotly[kaleido]~=6.0
 Requires-Dist: scipy

{howso_visuals-2.2.1.dist-info → howso_visuals-2.3.0.dist-info}/RECORD

@@ -8,15 +8,15 @@ config/powershell/Download-Tzdata.ps1,sha256=uGNszw3t3quz1ClN3PWlPr4cKMar9KxxFf4
 config/powershell/Helper-Functions.ps1,sha256=oLEunSYLr-zxtG9kqYuOGG8v3kSxTQEpqeERWQ4jC8I,990
 howso/visuals/__init__.py,sha256=OL9LT4186YIXkEmM4qc21maRnfrtxBmFUHnalcKzGWA,507
 howso/visuals/colors.py,sha256=2ChjT4MUjA4ZqITR_K1j3fUKNRBd8M9iyJ4ZT10cNlw,1709
-howso/visuals/graph.py,sha256=Q3LvQLLyM1wtr5JfzCZo1OD-caWMIA2RXuSw8uB21Wg,7157
-howso/visuals/visuals.py,sha256=24lFMRngQRcDqJrRcp0DL0dyh8afhQFeZUcspAtlMmc,30404
+howso/visuals/graph.py,sha256=_9DMGBQCzSuPA2UxIb4elgXpWlUG97YVTTASVdF4zOw,8054
+howso/visuals/visuals.py,sha256=ZW6hDabf-nQJZ5ZZ4yMC2vStJxk8cBwAkVxl5Dz1Hvc,30419
 howso/visuals/data/iris.csv,sha256=73iTb6rB42LgZwf89er-tEbuyjlvEAx6WywMPwt0GjU,2757
 howso/visuals/tests/conftest.py,sha256=BcvCVDWbwaQKSstzJzN9G48KoDnCgTtVdgYo2CJZTWM,1293
 howso/visuals/tests/test_graph.py,sha256=gfuJNpsNBLx2tDXDIR-ClbCZUSOQCmk8Dx2X-NhN2yM,1014
-howso/visuals/tests/test_plot.py,sha256=2uoE1szuv7-RNuR7d8hLcTnKy9kykCVLe8gIs9mVjkw,8106
-howso_visuals-2.2.1.dist-info/licenses/LICENSE-3RD-PARTY.txt,sha256=AHTkdi0OVJiRQ36XU5IXwIf-NZ6Co-DyUyNyoNxrLrs,364089
-howso_visuals-2.2.1.dist-info/licenses/LICENSE.txt,sha256=2xqHuoHohba7gpcZZKtOICRjzeKsQANXG8WoV9V35KM,33893
-howso_visuals-2.2.1.dist-info/METADATA,sha256=e1PmzViWPkXEHB31xQc7xjWZMMsF4WO4-BRKe_Tdcq8,41051
-howso_visuals-2.2.1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-howso_visuals-2.2.1.dist-info/top_level.txt,sha256=4ltSHx7mNsXczuoCPkz1irjq1x1JZir2QrX-ZwRNWXU,22
-howso_visuals-2.2.1.dist-info/RECORD,,
+howso/visuals/tests/test_plot.py,sha256=lOYYUty84LFFdaQCDcw-fMAicTqlHIwvNtuVch0RIEE,8121
+howso_visuals-2.3.0.dist-info/licenses/LICENSE-3RD-PARTY.txt,sha256=gQCRczb39so1uukj3mR5BYytgO87owXzfLkgjfDau-U,370555
+howso_visuals-2.3.0.dist-info/licenses/LICENSE.txt,sha256=2xqHuoHohba7gpcZZKtOICRjzeKsQANXG8WoV9V35KM,33893
+howso_visuals-2.3.0.dist-info/METADATA,sha256=AuOfqSN_7GYpZH5JhIrHcRjtQA6gm28Fxddl3pa8WT8,41051
+howso_visuals-2.3.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+howso_visuals-2.3.0.dist-info/top_level.txt,sha256=4ltSHx7mNsXczuoCPkz1irjq1x1JZir2QrX-ZwRNWXU,22
+howso_visuals-2.3.0.dist-info/RECORD,,

{howso_visuals-2.2.1.dist-info → howso_visuals-2.3.0.dist-info}/licenses/LICENSE-3RD-PARTY.txt

@@ -1,10 +1,10 @@
 Faker
-37.6.0
+37.8.0
 MIT License
 joke2k
 https://github.com/joke2k/faker
 Faker is a Python package that generates fake data for you.
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/faker-37.6.0.dist-info/licenses/LICENSE.txt
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/faker-37.8.0.dist-info/licenses/LICENSE.txt
 Copyright (c) 2012 Daniele Faraglia
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
@@ -57,12 +57,12 @@ SOFTWARE.
 
 
 PyYAML
-6.0.2
+6.0.3
 MIT License
 Kirill Simonov
 https://pyyaml.org/
 YAML parser and emitter for Python
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/PyYAML-6.0.2.dist-info/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pyyaml-6.0.3.dist-info/licenses/LICENSE
 Copyright (c) 2017-2021 Ingy döt Net
 Copyright (c) 2006-2016 Kirill Simonov
 
@@ -178,18 +178,18 @@ one at http://mozilla.org/MPL/2.0/.
 
 
 cffi
-1.17.1
-MIT License
+2.0.0
+UNKNOWN
 Armin Rigo, Maciej Fijalkowski
-http://cffi.readthedocs.org
+https://cffi.readthedocs.io/en/latest/whatsnew.html
 Foreign Function Interface for Python calling C code.
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/cffi-1.17.1.dist-info/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/cffi-2.0.0.dist-info/licenses/LICENSE
 
 Except when otherwise stated (look for LICENSE files in directories or
 information at the beginning of each file) all software and
 documentation is licensed as follows: 
 
-    The MIT License
+    MIT No Attribution
 
     Permission is hereby granted, free of charge, to any person 
     obtaining a copy of this software and associated documentation 
@@ -197,10 +197,7 @@ documentation is licensed as follows:
     restriction, including without limitation the rights to use, 
     copy, modify, merge, publish, distribute, sublicense, and/or 
     sell copies of the Software, and to permit persons to whom the 
-    Software is furnished to do so, subject to the following conditions:
-
-    The above copyright notice and this permission notice shall be included 
-    in all copies or substantial portions of the Software.
+    Software is furnished to do so.
 
     THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS 
     OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, 
@@ -243,12 +240,36 @@ SOFTWARE.
 
 
 choreographer
-1.0.10
-UNKNOWN
+1.1.1
+# MIT License
+
+Copyright (c) Plotly, Inc.
+
+Permission is hereby granted, free of charge, to any person
+obtaining a copy of this software and associated documentation
+files (the "Software"), to deal in the Software without
+restriction, including without limitation the rights to use,
+copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the
+Software is furnished to do so, subject to the following
+conditions:
+
+The above copyright notice and this permission notice shall be
+included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+OTHER DEALINGS IN THE SOFTWARE.
+
 Andrew Pikul <ajpikul@gmail.com>, Neyberson Atencio <neyberatencio@gmail.com>
 https://github.com/plotly/choreographer
 Devtools Protocol implementation for chrome.
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/choreographer-1.0.10.dist-info/licenses/LICENSE.md
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/choreographer-1.1.1.dist-info/licenses/LICENSE.md
 # MIT License
 
 Copyright (c) Plotly, Inc.
@@ -276,12 +297,12 @@ OTHER DEALINGS IN THE SOFTWARE.
 
 
 click
-8.2.1
+8.3.0
 UNKNOWN
 UNKNOWN
 https://github.com/pallets/click/
 Composable command line interface toolkit
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/click-8.2.1.dist-info/licenses/LICENSE.txt
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/click-8.3.0.dist-info/licenses/LICENSE.txt
 Copyright 2014 Pallets
 
 Redistribution and use in source and binary forms, with or without
@@ -351,12 +372,12 @@ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 
 cryptography
-45.0.7
-Apache-2.0 OR BSD-3-Clause
-The cryptography developers <cryptography-dev@python.org>
+46.0.2
+UNKNOWN
+The Python Cryptographic Authority and individual contributors <cryptography-dev@python.org>
 https://github.com/pyca/cryptography
 cryptography is a package which provides cryptographic recipes and primitives to Python developers.
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/cryptography-45.0.7.dist-info/licenses/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/cryptography-46.0.2.dist-info/licenses/LICENSE
 This software is made available under the terms of *either* of the licenses
 found in LICENSE.APACHE or LICENSE.BSD. Contributions to cryptography are made
 under the terms of *both* these licenses.
@@ -608,12 +629,12 @@ A library to handle automated deprecations
 
 
 fonttools
-4.59.2
+4.60.1
 MIT
 Just van Rossum
 http://github.com/fonttools/fonttools
 Tools to manipulate font files
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/fonttools-4.59.2.dist-info/licenses/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/fonttools-4.60.1.dist-info/licenses/LICENSE
 MIT License
 
 Copyright (c) 2017 Just van Rossum
@@ -706,6 +727,36 @@ NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
 SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 
+iniconfig
+2.1.0
+MIT License
+Ronny Pfannschmidt <opensource@ronnypfannschmidt.de>, Holger Krekel <holger.krekel@gmail.com>
+https://github.com/pytest-dev/iniconfig
+brain-dead simple config-ini parsing
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/iniconfig-2.1.0.dist-info/licenses/LICENSE
+The MIT License (MIT)
+
+Copyright (c) 2010 - 2023 Holger Krekel and others
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of
+this software and associated documentation files (the "Software"), to deal in
+the Software without restriction, including without limitation the rights to
+use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
+of the Software, and to permit persons to whom the Software is furnished to do
+so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+
 joblib
 1.5.2
 BSD License
@@ -745,7 +796,7 @@ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 
 kaleido
-1.0.0
+1.1.0
 The MIT License (MIT)
 
 Copyright (c) Plotly, Inc
@@ -771,7 +822,7 @@ THE SOFTWARE.
 Andrew Pikul <ajpikul@gmail.com>, Neyberson Atencio <neyberatencio@gmail.com>
 https://github.com/plotly/kaleido
 Plotly graph export library
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/kaleido-1.0.0.dist-info/LICENSE.md
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/kaleido-1.1.0.dist-info/LICENSE.md
 The MIT License (MIT)
 
 Copyright (c) Plotly, Inc
@@ -876,12 +927,12 @@ to indicate the copyright and license terms:
 
 
 llvmlite
-0.44.0
+0.45.1
 BSD
 UNKNOWN
 http://llvmlite.readthedocs.io
 lightweight wrapper around basic LLVM functionality
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/llvmlite-0.44.0.dist-info/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/llvmlite-0.45.1.dist-info/licenses/LICENSE
 Copyright (c) 2014-, Continuum Analytics, Inc.
 All rights reserved.
 
@@ -1160,12 +1211,12 @@ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 SOFTWARE.
 
 narwhals
-2.3.0
+2.6.0
 MIT License
 Marco Gorelli <hello_narwhals@proton.me>
 https://github.com/narwhals-dev/narwhals
 Extremely lightweight compatibility layer between dataframe libraries
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/narwhals-2.3.0.dist-info/licenses/LICENSE.md
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/narwhals-2.6.0.dist-info/licenses/LICENSE.md
 MIT License
 
 Copyright (c) 2024, Marco Gorelli
@@ -1236,12 +1287,12 @@ NetworkX is distributed with the 3-clause BSD license.
 
 
 numba
-0.61.2
+0.62.1
 BSD License
 UNKNOWN
 https://numba.pydata.org
 compiling Python code using LLVM
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/numba-0.61.2.dist-info/licenses/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/numba-0.62.1.dist-info/licenses/LICENSE
 Copyright (c) 2012, Anaconda, Inc.
 All rights reserved.
 
@@ -2471,12 +2522,12 @@ under the terms of *both* these licenses.
 
 
 pandas
-2.3.2
+2.3.3
 BSD License
 The Pandas Development Team <pandas-dev@python.org>
 https://pandas.pydata.org
 Powerful data structures for data analysis, time series, and statistics
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pandas-2.3.2.dist-info/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pandas-2.3.3.dist-info/LICENSE
 BSD 3-Clause License
 
 Copyright (c) 2008-2011, AQR Capital Management, LLC, Lambda Foundry, Inc. and PyData Development Team
@@ -5225,12 +5276,12 @@ the FAQ for more information on the distribution of modified source versions.
 
 
 pip-tools
-7.5.0
+7.5.1
 BSD License
 Vincent Driessen <me@nvie.com>
 https://github.com/jazzband/pip-tools/
 pip-tools keeps your pinned dependencies fresh.
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pip_tools-7.5.0.dist-info/licenses/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pip_tools-7.5.1.dist-info/licenses/LICENSE
 BSD 3-Clause License
 
 Copyright (c). All rights reserved.
@@ -5262,12 +5313,12 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 
 plotly
-6.3.0
+6.3.1
 MIT License
 Chris P <chris@plot.ly>
 https://plotly.com/python/
 An open-source interactive data visualization library for Python
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/plotly-6.3.0.dist-info/licenses/LICENSE.txt
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/plotly-6.3.1.dist-info/licenses/LICENSE.txt
 MIT License
 
 Copyright (c) 2016-2024 Plotly Technologies Inc.
@@ -5291,13 +5342,43 @@ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
 THE SOFTWARE.
 
 
+pluggy
+1.6.0
+MIT License
+Holger Krekel <holger@merlinux.eu>
+UNKNOWN
+plugin and hook calling mechanisms for python
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pluggy-1.6.0.dist-info/licenses/LICENSE
+The MIT License (MIT)
+
+Copyright (c) 2015 holger krekel (rather uses bitbucket/hpk42)
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+
 pycparser
-2.22
+2.23
 BSD License
 Eli Bendersky
 https://github.com/eliben/pycparser
 C parser in Python
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pycparser-2.22.dist-info/LICENSE
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pycparser-2.23.dist-info/LICENSE
 pycparser -- A C parser in Python
 
 Copyright (c) 2008-2022, Eli Bendersky
@@ -5362,12 +5443,12 @@ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 
 pyparsing
-3.2.3
-MIT License
+3.2.5
+UNKNOWN
 Paul McGuire <ptmcg.gm+pyparsing@gmail.com>
 https://github.com/pyparsing/pyparsing/
-pyparsing module - Classes and methods to define and execute parsing grammars
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pyparsing-3.2.3.dist-info/LICENSE
+pyparsing - Classes and methods to define and execute parsing grammars
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pyparsing-3.2.5.dist-info/licenses/LICENSE
 Permission is hereby granted, free of charge, to any person obtaining
 a copy of this software and associated documentation files (the
 "Software"), to deal in the Software without restriction, including
@@ -5418,6 +5499,67 @@ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
 THE SOFTWARE.
 
 
+pytest
+8.4.2
+MIT License
+Holger Krekel, Bruno Oliveira, Ronny Pfannschmidt, Floris Bruynooghe, Brianna Laugher, Florian Bruhin, Others (See AUTHORS)
+https://docs.pytest.org/en/latest/
+pytest: simple powerful testing with Python
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pytest-8.4.2.dist-info/licenses/LICENSE
+The MIT License (MIT)
+
+Copyright (c) 2004 Holger Krekel and others
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of
+this software and associated documentation files (the "Software"), to deal in
+the Software without restriction, including without limitation the rights to
+use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
+of the Software, and to permit persons to whom the Software is furnished to do
+so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+
+pytest-timeout
+2.4.0
+DFSG approved; MIT License
+Floris Bruynooghe
+https://github.com/pytest-dev/pytest-timeout
+pytest plugin to abort hanging tests
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/pytest_timeout-2.4.0.dist-info/licenses/LICENSE
+The MIT License
+
+Copyright (C) 2012, 2014 Floris Bruynooghe
+
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+THE SOFTWARE.
+
+
 python-dateutil
 2.9.0.post0
 Apache Software License; BSD License
@@ -5721,12 +5863,12 @@ SOFTWARE.
 
 
 scikit-learn
-1.7.1
+1.7.2
 UNKNOWN
 UNKNOWN
 https://scikit-learn.org
 A set of python modules for machine learning and data mining
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/scikit_learn-1.7.1.dist-info/licenses/COPYING
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/scikit_learn-1.7.2.dist-info/licenses/COPYING
 BSD 3-Clause License
 
 Copyright (c) 2007-2024 The scikit-learn developers.
@@ -5842,12 +5984,12 @@ requirements of the license of GCC.
 
 
 scipy
-1.16.1
+1.16.2
 BSD License
 UNKNOWN
 https://scipy.org/
 Fundamental algorithms for scientific computing in Python
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/scipy-1.16.1.dist-info/LICENSE.txt
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/scipy-1.16.2.dist-info/LICENSE.txt
 Copyright (c) 2001-2002 Enthought, Inc. 2003, SciPy Developers.
 All rights reserved.
 
@@ -6852,12 +6994,12 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 
 simplejson
-3.20.1
+3.20.2
 Academic Free License (AFL); MIT License
 Bob Ippolito
 https://github.com/simplejson/simplejson
 Simple, fast, extensible JSON encoder/decoder for Python
-/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/simplejson-3.20.1.dist-info/LICENSE.txt
+/home/runner/.pyenv/versions/3.13.7/lib/python3.13/site-packages/simplejson-3.20.2.dist-info/licenses/LICENSE.txt
 simplejson is dual-licensed software. It is available under the terms
 of the MIT license, or the Academic Free License version 2.1. The full
 text of each license agreement is included below. This code is also