holobench 1.3.5__py3-none-any.whl → 1.23.0__py3-none-any.whl

bencher/variables/sweep_base.py

@@ -1,167 +0,0 @@
-from __future__ import annotations
-from typing import List, Any, Tuple
-from copy import deepcopy
-
-import numpy as np
-import param
-from param import Parameterized
-import holoviews as hv
-import panel as pn
-from bencher.utils import hash_sha1
-
-# slots that are shared across all Sweep classes
-# param and slots don't work easily with multiple inheritance so define here
-shared_slots = ["units", "samples", "samples_debug"]
-
-
-def describe_variable(
-    v: Parameterized, debug: bool, include_samples: bool, value=None
-) -> List[str]:
-    """Generate a string description of a variable
-
-    Args:
-        v (param.Parameterized): parameter to describe
-        debug (bool): Generate a reduced number of samples from the variable
-        include_samples (bool): Include a description of the samples
-
-    Returns:
-        str: String description of the variable
-    """
-    indent = "    "
-    sampling_str = []
-    sampling_str.append(f"{v.name}:")
-    if include_samples:
-        # sampling_str.append(f"{indent}{v.sampling_str(debug)}")
-        sampling_str.append(f"{indent}number of samples: {len(v.values(debug))}")
-        sampling_str.append(f"{indent}sample values: {[str(v) for v in v.values(debug)]}")
-
-    if value is not None:
-        sampling_str.append(f"{indent}value: {value}")
-    if hasattr(v, "units"):
-        if v.units != "ul" and len(v.units) > 0:
-            sampling_str.append(f"{indent}units: [{v.units}]")
-    if v.doc is not None:
-        sampling_str.append(f"{indent}docs: {v.doc}")
-    for i in range(len(sampling_str)):
-        sampling_str[i] = f"{indent}{sampling_str[i]}"
-    return sampling_str
-
-
-class SweepBase(param.Parameter):
-    # def __init__(self, **params):
-    # super().__init__(**params)
-    # self.units = ""
-    # slots = ["units", "samples", "samples_debug"]
-    # __slots__ = shared_slots
-
-    def values(self, debug: bool) -> List[Any]:
-        """All sweep classes must implement this method. This generates sample values from based on the parameters bounds and sample number.
-
-        Args:
-            debug (bool): Return a reduced set of samples to enable fast debugging of a data generation and plotting pipeline. Ideally when debug is true, 2 samples will be returned
-
-        Returns:
-            List[Any]: A list of samples from the variable
-        """
-        raise NotImplementedError
-
-    def hash_persistent(self) -> str:
-        """A hash function that avoids the PYTHONHASHSEED 'feature' which returns a different hash value each time the program is run"""
-        return hash_sha1(
-            (self.units, self.samples, self.samples_debug)  # pylint: disable=no-member
-        )
-
-    def sampling_str(self, debug=False) -> str:
-        """Generate a string representation of the of the sampling procedure
-
-        Args:
-            debug (bool): If true then self.samples_debug is used
-        """
-
-        samples = self.values(debug)
-        object_str = ",".join([str(i) for i in samples])
-        return f"Taking {len(samples)} samples from {self.name} with values: [{object_str}]"
-
-    def as_slider(self, debug=False) -> pn.widgets.slider.DiscreteSlider:
-        """given a sweep variable (self), return the range of values as a panel slider
-
-        Args:
-            debug (bool, optional): pass to the sweepvar to produce a full set of varaibles, or when debug=True, a reduces number of sweep vars. Defaults to False.
-
-        Returns:
-            pn.widgets.slider.DiscreteSlider: A panel slider with the values() of the sweep variable
-        """
-        return pn.widgets.slider.DiscreteSlider(name=self.name, options=list(self.values(debug)))
-
-    def as_dim(self, compute_values=False, debug=False) -> hv.Dimension:
-        """Takes a sweep variable and turns it into a holoview dimension
-
-        Returns:
-            hv.Dimension:
-        """
-        name_tuple = (self.name, self.name)
-
-        params = {}
-        if hasattr(self, "bounds"):
-            if compute_values:
-                params["values"] = self.values(debug)
-                # params["range"] = tuple(self.bounds)
-            else:
-                params["range"] = tuple(self.bounds)
-                params["default"] = self.default
-
-        else:
-            params["values"] = self.values(debug)
-            params["default"] = self.default
-
-        if hasattr(self, "step"):
-            params["step"] = getattr(self, "step")
-
-        return hv.Dimension(name_tuple, unit=self.units, **params)  # pylint: disable=no-member
-
-    def indices_to_samples(self, desires_num_samples, sample_values):
-        indices = [
-            int(i) for i in np.linspace(0, len(sample_values) - 1, desires_num_samples, dtype=int)
-        ]
-
-        if len(indices) > len(sample_values):
-            return sample_values
-
-        return [sample_values[i] for i in indices]
-
-    def with_samples(self, samples: int) -> SweepBase:
-        output = deepcopy(self)
-        # TODO set up class properly. Slightly complicated due to slots
-        output.samples = samples  # pylint: disable = attribute-defined-outside-init
-        if hasattr(output, "step"):
-            # hack TODO fix this
-            output.step = None  # pylint: disable = attribute-defined-outside-init
-        return output
-
-    def with_sample_values(self, sample_values: int) -> SweepBase:
-        output = deepcopy(self)
-        # TODO set up class properly. Slightly complicated due to slots
-        try:
-            output.sample_values = sample_values  # pylint: disable = attribute-defined-outside-init
-        except AttributeError:
-            output.objects = sample_values  # pylint: disable = attribute-defined-outside-init
-        output.samples = len(sample_values)  # pylint: disable = attribute-defined-outside-init
-        return output
-
-    def with_const(self, const_value: Any) -> Tuple[SweepBase, Any]:
-        """Create a new instance of SweepBase with a constant value.
-
-        Args:
-            const_value (Any): The constant value to be associated with the new instance.
-
-        Returns:
-            Tuple[SweepBase, Any]: A tuple containing the new instance of SweepBase and the constant value.
-        """
-        return (deepcopy(self), const_value)
-
-    def with_level(self, level: int = 1, max_level: int = 12) -> SweepBase:
-        assert level >= 1
-        # TODO work out if the order can be returned in level order always
-        samples = [0, 1, 2, 3, 5, 9, 17, 33, 65, 129, 257, 513, 1025, 2049]
-        out = self.with_sample_values(self.with_samples(samples[min(max_level, level)]).values())
-        return out

bencher/variables/time.py

@@ -1,74 +0,0 @@
-from datetime import datetime
-from typing import List
-
-from pandas import Timestamp
-from param import Selector
-from bencher.variables.sweep_base import SweepBase, shared_slots
-
-
-class TimeBase(SweepBase, Selector):
-    """A class to capture a time snapshot of benchmark values.  Time is reprented as a continous value i.e a datetime which is converted into a np.datetime64.  To represent time as a discrete value use the TimeEvent class. The distinction is because holoview and plotly code makes different assumptions about discrete vs continous variables"""
-
-    __slots__ = shared_slots
-
-    def values(self, debug=False) -> List[str]:
-        """return all the values for a parameter sweep.  If debug is true return a reduced list"""
-        # print(self.sampling_str(debug))
-        return self.objects
-
-
-class TimeSnapshot(TimeBase):
-    """A class to capture a time snapshot of benchmark values.  Time is reprented as a continous value i.e a datetime which is converted into a np.datetime64.  To represent time as a discrete value use the TimeEvent class. The distinction is because holoview and plotly code makes different assumptions about discrete vs continous variables"""
-
-    __slots__ = shared_slots
-
-    def __init__(
-        self,
-        datetime_src: datetime | str,
-        units: str = "time",
-        samples: int = None,
-        samples_debug: int = 2,
-        **params,
-    ):
-        if isinstance(datetime_src, str):
-            TimeBase.__init__(self, [datetime_src], instantiate=True, **params)
-        else:
-            TimeBase.__init__(
-                self,
-                objects=[Timestamp(datetime_src)],
-                instantiate=True,
-                **params,
-            )
-        self.units = units
-        if samples is None:
-            self.samples = len(self.objects)
-        else:
-            self.samples = samples
-        self.samples_debug = min(self.samples, samples_debug)
-
-
-class TimeEvent(TimeBase):
-    """A class to represent a discrete event in time where the data was captured i.e a series of pull requests.  Here time is discrete and can't be interpolated, to represent time as a continous value use the TimeSnapshot class.  The distinction is because holoview and plotly code makes different assumptions about discrete vs continous variables"""
-
-    __slots__ = shared_slots
-
-    def __init__(
-        self,
-        time_event: str,
-        units: str = "event",
-        samples: int = None,
-        samples_debug: int = 2,
-        **params,
-    ):
-        TimeBase.__init__(
-            self,
-            objects=[time_event],
-            instantiate=True,
-            **params,
-        )
-        self.units = units
-        if samples is None:
-            self.samples = len(self.objects)
-        else:
-            self.samples = samples
-        self.samples_debug = min(self.samples, samples_debug)

holobench-1.3.5.dist-info/RECORD

@@ -1,74 +0,0 @@
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