highdimensionsmap 0.1.0__py3-none-any.whl

highdimensionsmap/__init__.py

@@ -0,0 +1,8 @@
+from .scanner import HDMScanner
+from .kinematics import HDMKinematics
+from .tracker import MotionNoiseTracker
+from .core import hdm
+from .api import app
+
+__version__ = "0.1.0"
+__all__ = ["HDMScanner", "HDMKinematics", "MotionNoiseTracker", "hdm", "app"]

highdimensionsmap/api.py

@@ -0,0 +1,68 @@
+from typing import List, Union
+
+import numpy as np
+from fastapi import FastAPI, HTTPException
+from pydantic import BaseModel
+
+from .scanner import HDMScanner
+
+app = FastAPI(title="HDM API", version="0.1.0")
+scanner = HDMScanner()
+
+
+class TransformRequest(BaseModel):
+    input: Union[List[float], List[List[float]]]
+
+
+class QueryRequest(BaseModel):
+    dataset: List[List[float]]
+    query: List[float]
+    k: int = 5
+
+
+@app.get("/health")
+def healthcheck():
+    return {"status": "ok"}
+
+
+@app.post("/transform")
+def transform_endpoint(payload: TransformRequest):
+    try:
+        values = np.asarray(payload.input, dtype=float)
+    except ValueError as exc:
+        raise HTTPException(status_code=400, detail="'input' precisa ser numérico.") from exc
+
+    if values.ndim not in (1, 2):
+        raise HTTPException(status_code=400, detail="'input' deve ser um vetor ou uma matriz 2D.")
+
+    signature = scanner.transform(values)
+    return {"signature": np.asarray(signature).tolist()}
+
+
+@app.post("/query")
+def query_endpoint(payload: QueryRequest):
+    try:
+        dataset = np.asarray(payload.dataset, dtype=float)
+        query = np.asarray(payload.query, dtype=float)
+    except ValueError as exc:
+        raise HTTPException(status_code=400, detail="'dataset' e 'query' precisam ser numéricos.") from exc
+
+    if dataset.ndim != 2:
+        raise HTTPException(status_code=400, detail="'dataset' deve ser uma matriz 2D.")
+    if query.ndim != 1:
+        raise HTTPException(status_code=400, detail="'query' deve ser um vetor 1D.")
+    if dataset.shape[1] != query.shape[0]:
+        raise HTTPException(status_code=400, detail="As dimensões de 'dataset' e 'query' devem bater.")
+    if payload.k <= 0:
+        raise HTTPException(status_code=400, detail="'k' precisa ser maior que zero.")
+    if payload.k > dataset.shape[0]:
+        raise HTTPException(status_code=400, detail="'k' não pode ser maior que o tamanho do dataset.")
+
+    indices, distances = scanner.query(dataset, query, k=payload.k)
+    return {"indices": indices.tolist(), "distances": distances.tolist()}
+
+
+if __name__ == "__main__":
+    import uvicorn
+
+    uvicorn.run("highdimensionsmap.api:app", host="0.0.0.0", port=8000, reload=True)

highdimensionsmap/core.py

@@ -0,0 +1,74 @@
+import numpy as np
+
+
+class hdm:
+    """
+    Motor leve de projeção geométrica não linear e indexação para altas dimensões.
+    """
+
+    def __init__(self, input_dim=512, latent_modes=32, steps=32, seed=42):
+        self.input_dim = input_dim
+        self.latent_modes = latent_modes
+        self.steps = steps
+        self.seed = seed
+        self.time_grid = np.linspace(0, 2 * np.pi, steps)
+        self._rebuild_projection_matrix(self.input_dim)
+
+    def _rebuild_projection_matrix(self, input_dim):
+        rng = np.random.default_rng(self.seed)
+        w_raw = rng.standard_normal((self.latent_modes, input_dim))
+        self.projection_matrix, _ = np.linalg.qr(w_raw.T)
+        self.projection_matrix = self.projection_matrix.T
+
+    def _align_dimensions(self, X):
+        X = np.asarray(X, dtype=float)
+        X = np.atleast_2d(X)
+
+        if X.shape[1] != self.input_dim:
+            if X.shape[1] > self.input_dim:
+                X = X[:, : self.input_dim]
+            else:
+                pad_width = ((0, 0), (0, self.input_dim - X.shape[1]))
+                X = np.pad(X, pad_width, mode="constant", constant_values=0.0)
+
+        return X
+
+    def transform(self, X):
+        """Mapeia vetores D-dimensionais em assinaturas espectrais invariantes."""
+        X = self._align_dimensions(X)
+        norms = np.linalg.norm(X, axis=1, keepdims=True)
+        norms[norms == 0] = 1e-9
+        X_norm = X / norms
+
+        proj = np.dot(X_norm, self.projection_matrix.T)
+        omegas = np.tanh(proj) * np.pi
+
+        phases = omegas[:, :, np.newaxis] * self.time_grid[np.newaxis, np.newaxis, :]
+        waveforms = np.cos(phases)
+
+        fft_energy = np.abs(np.fft.rfft(waveforms, axis=2))
+        signatures = fft_energy.reshape(X.shape[0], -1)
+
+        sig_norms = np.linalg.norm(signatures, axis=1, keepdims=True)
+        sig_norms[sig_norms == 0] = 1.0
+        signatures = signatures / sig_norms
+
+        return signatures if signatures.shape[0] > 1 else signatures[0]
+
+    def query_knn(self, dataset_signatures, query_vector, k=5):
+        """Busca os k vizinhos mais próximos no espaço espectral."""
+        dataset_array = np.asarray(dataset_signatures, dtype=float)
+        query_sig = self.transform(query_vector)
+
+        if dataset_array.ndim == 1:
+            dataset_array = dataset_array.reshape(1, -1)
+
+        if dataset_array.shape[1] != query_sig.shape[0]:
+            dataset_signatures = np.asarray([self.transform(row) for row in dataset_array], dtype=float)
+        else:
+            dataset_signatures = dataset_array
+
+        distances = np.linalg.norm(dataset_signatures - query_sig, axis=1)
+        nearest_indices = np.argsort(distances)[:k]
+        return nearest_indices, distances[nearest_indices]
+

highdimensionsmap/kinematics.py

@@ -0,0 +1,26 @@
+import numpy as np
+
+class HDMKinematics:
+    def __init__(self, scanner):
+        self.scanner = scanner
+
+    def track(self, trajectory_sequence, filter_window=3):
+        signatures = self.scanner.transform(trajectory_sequence)
+        n_passos, n_features = signatures.shape
+        
+        velocities = np.linalg.norm(np.diff(signatures, axis=0), axis=1)
+        
+        smoothed = np.zeros_like(signatures)
+        pad = filter_window // 2
+        for col in range(n_features):
+            padded = np.pad(signatures[:, col], pad, mode='edge')
+            smoothed[:, col] = np.convolve(padded, np.ones(filter_window)/filter_window, mode='valid')
+            
+        noise_levels = np.linalg.norm(signatures - smoothed, axis=1)
+        
+        return {
+            "signatures": signatures,
+            "velocity": velocities,
+            "noise": noise_levels
+        }
+      

highdimensionsmap/scanner.py

@@ -0,0 +1,80 @@
+import numpy as np
+
+
+class HDMScanner:
+    def __init__(self, input_dim=512, latent_modes=32, steps=32, seed=42):
+        self.input_dim = input_dim
+        self.latent_modes = latent_modes
+        self.steps = steps
+        self.seed = seed
+        self.time_grid = np.linspace(0, 2 * np.pi, steps)
+        self._rebuild_projection_matrix(self.input_dim)
+
+    def _rebuild_projection_matrix(self, input_dim):
+        rng = np.random.default_rng(self.seed)
+        w_raw = rng.standard_normal((self.latent_modes, input_dim))
+        self.projection_matrix, _ = np.linalg.qr(w_raw.T)
+        self.projection_matrix = self.projection_matrix.T
+
+    def _align_dimensions(self, X):
+        X = np.asarray(X, dtype=float)
+        X = np.atleast_2d(X)
+
+        if X.shape[1] != self.input_dim:
+            if X.shape[1] > self.input_dim:
+                X = X[:, : self.input_dim]
+            else:
+                pad_width = ((0, 0), (0, self.input_dim - X.shape[1]))
+                X = np.pad(X, pad_width, mode="constant", constant_values=0.0)
+
+        return X
+
+    def generate_dataset(self, n_samples=1, noise=0.05, drift=0.1):
+        """Gera um conjunto de amostras em alta dimensão com estrutura temporal e ruído."""
+        rng = np.random.default_rng(self.seed)
+        base = rng.standard_normal((n_samples, self.input_dim))
+        latent = rng.standard_normal((n_samples, self.latent_modes))
+
+        projected = latent @ self.projection_matrix
+        smooth = projected + drift * np.linspace(-1.0, 1.0, self.input_dim)
+        noisy = smooth + noise * rng.standard_normal((n_samples, self.input_dim))
+        dataset = noisy / np.linalg.norm(noisy, axis=1, keepdims=True)
+        return dataset
+
+    def transform(self, X):
+        X = self._align_dimensions(X)
+        norms = np.linalg.norm(X, axis=1, keepdims=True)
+        norms[norms == 0] = 1e-9
+        X_norm = X / norms
+
+        proj = np.dot(X_norm, self.projection_matrix.T)
+        omegas = np.tanh(proj) * np.pi
+
+        phases = omegas[:, :, np.newaxis] * self.time_grid[np.newaxis, np.newaxis, :]
+        waveforms = np.cos(phases)
+
+        fft_energy = np.abs(np.fft.rfft(waveforms, axis=2))
+        signatures = fft_energy.reshape(X.shape[0], -1)
+
+        sig_norms = np.linalg.norm(signatures, axis=1, keepdims=True)
+        sig_norms[sig_norms == 0] = 1.0
+        signatures = signatures / sig_norms
+
+        return signatures if signatures.shape[0] > 1 else signatures[0]
+
+    def query(self, dataset_signatures, query_vector, k=5):
+        dataset_array = np.asarray(dataset_signatures, dtype=float)
+        query_sig = self.transform(query_vector)
+
+        if dataset_array.ndim == 1:
+            dataset_array = dataset_array.reshape(1, -1)
+
+        if dataset_array.shape[1] != query_sig.shape[0]:
+            dataset_signatures = np.asarray([self.transform(row) for row in dataset_array], dtype=float)
+        else:
+            dataset_signatures = dataset_array
+
+        distances = np.linalg.norm(dataset_signatures - query_sig, axis=1)
+        nearest = np.argsort(distances)[:k]
+        return nearest, distances[nearest]
+

highdimensionsmap/tracker.py

@@ -0,0 +1,31 @@
+import numpy as np
+
+class MotionNoiseTracker:
+    """
+    Rastreia trajetórias temporais em alta dimensão separando dinâmica de ruído estocástico.
+    """
+    def __init__(self, scanner):
+        self.scanner = scanner
+
+    def track(self, trajectory_sequence, filter_window=3):
+        signatures = self.scanner.transform(trajectory_sequence)
+        n_passos, n_features = signatures.shape
+        
+        # Velocidade instantânea espectral
+        velocities = np.linalg.norm(np.diff(signatures, axis=0), axis=1)
+        
+        # Filtro temporal 1D independente por canal
+        smoothed = np.zeros_like(signatures)
+        pad = filter_window // 2
+        for col in range(n_features):
+            padded = np.pad(signatures[:, col], pad, mode='edge')
+            smoothed[:, col] = np.convolve(padded, np.ones(filter_window)/filter_window, mode='valid')
+            
+        noise_levels = np.linalg.norm(signatures - smoothed, axis=1)
+        
+        return {
+            "signatures": signatures,
+            "velocity": velocities,
+            "noise": noise_levels
+        }
+      

highdimensionsmap-0.1.0.dist-info/METADATA

@@ -0,0 +1,95 @@
+Metadata-Version: 2.4
+Name: highdimensionsmap
+Version: 0.1.0
+Summary: High Dimensions Map: lightweight non-linear geometric scanning and phase-orbit indexing
+Author: Marta Reinhardt
+License: Apache-2.0
+Keywords: geometry,high-dimensions,embeddings,manifold-learning,kinematics,spectral
+Requires-Python: >=3.8
+Description-Content-Type: text/markdown
+License-File: LICENSE
+Requires-Dist: numpy>=1.20.0
+Requires-Dist: fastapi>=0.110.0
+Requires-Dist: uvicorn>=0.30.0
+Dynamic: license-file
+
+# HighDimensionsMap
+
+High Dimensions Map is a lightweight Python library for generating and analyzing high-dimensional data with spectral signatures and similarity queries.
+
+It is designed to work like a regular scientific Python package: import it, create a scanner, generate data, transform vectors, and run nearest-neighbor queries directly from Python, notebooks, or Colab.
+
+## Installation
+
+```bash
+pip install git+https://github.com/reinhardtmarta/highdimensionsmap.git
+```
+
+Or from a local checkout:
+
+```bash
+cd highdimensionsmap
+pip install -e .
+```
+
+## Quick start
+
+```python
+from highdimensionsmap import HDMScanner, MotionNoiseTracker
+
+scanner = HDMScanner(input_dim=128, latent_modes=32, steps=48, seed=42)
+
+dataset = scanner.generate_dataset(20)
+print(dataset.shape)
+
+signatures = scanner.transform(dataset)
+print(signatures.shape)
+
+tracker = MotionNoiseTracker(scanner)
+metrics = tracker.track(dataset)
+print(metrics["velocity"][:5])
+```
+
+## API overview
+
+### HDMScanner
+
+```python
+scanner = HDMScanner(input_dim=128, latent_modes=32, steps=48, seed=42)
+```
+
+Methods:
+
+- `generate_dataset(n_samples=1, noise=0.05, drift=0.1)`
+- `transform(X)`
+- `query(dataset_signatures, query_vector, k=5)`
+
+### MotionNoiseTracker
+
+```python
+tracker = MotionNoiseTracker(scanner)
+result = tracker.track(trajectory)
+```
+
+Returns a dictionary with:
+
+- `signatures`
+- `velocity`
+- `noise`
+
+## Colab usage
+
+```python
+!pip install git+https://github.com/reinhardtmarta/highdimensionsmap.git
+
+from highdimensionsmap import HDMScanner
+
+scanner = HDMScanner(input_dim=64, latent_modes=16, steps=32, seed=7)
+dataset = scanner.generate_dataset(10)
+signatures = scanner.transform(dataset)
+print(signatures.shape)
+```
+
+## Notes
+
+This package is designed as a Python library first. The FastAPI app is optional and can be used as an auxiliary interface, but the main workflow is direct Python use.

highdimensionsmap-0.1.0.dist-info/RECORD

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+highdimensionsmap/core.py,sha256=1Q4jsQKRIr-CwUvWfyddaCSYmYWUv_wsVCxBv5NK7mc,2750
+highdimensionsmap/kinematics.py,sha256=3gIyELpLuc1HwHYmDdcBwA7HoNZi8YdTdWstdPDmulc,887
+highdimensionsmap/scanner.py,sha256=pHPhKNwjIkoippZi3LVp34e2i7VCbUWfo1gr0sfzhVk,3116
+highdimensionsmap/tracker.py,sha256=bv0vi1KJYgqX1NCbbYavhAHMOe3eq0SQzo8ffd8DhkA,1102
+highdimensionsmap-0.1.0.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
+highdimensionsmap-0.1.0.dist-info/METADATA,sha256=ZlOecOUYhL6SLjVCrT2UQARUSgAmIj8F3ly-FUKYkhI,2369
+highdimensionsmap-0.1.0.dist-info/WHEEL,sha256=YVMoNqKzERt-wjUZwJ33xBGAwnFl-4cqbYkTtWa4itE,91
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highdimensionsmap-0.1.0.dist-info/WHEEL

@@ -0,0 +1,5 @@
+Wheel-Version: 1.0
+Generator: setuptools (84.0.0)
+Root-Is-Purelib: true
+Tag: py3-none-any
+

highdimensionsmap-0.1.0.dist-info/licenses/LICENSE

@@ -0,0 +1,201 @@
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highdimensionsmap-0.1.0.dist-info/top_level.txt

@@ -0,0 +1 @@
+highdimensionsmap