hestia-earth-models 0.64.7__py3-none-any.whl → 0.64.9__py3-none-any.whl
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- hestia_earth/models/cycle/animal/milkYield.py +10 -22
- hestia_earth/models/cycle/siteArea.py +2 -1
- hestia_earth/models/cycle/unknownPreSeasonWaterRegime.py +0 -1
- hestia_earth/models/environmentalFootprintV3/soilQualityIndexLandOccupation.py +73 -82
- hestia_earth/models/environmentalFootprintV3/soilQualityIndexLandTransformation.py +168 -0
- hestia_earth/models/environmentalFootprintV3/soilQualityIndexTotalLandUseEffects.py +77 -0
- hestia_earth/models/environmentalFootprintV3/utils.py +1 -1
- hestia_earth/models/faostat2018/landTransformationFromCropland100YearAverage.py +3 -2
- hestia_earth/models/faostat2018/landTransformationFromCropland20YearAverage.py +3 -2
- hestia_earth/models/frischknechtEtAl2000/ionisingRadiationKbqU235Eq.py +69 -37
- hestia_earth/models/hyde32/utils.py +4 -0
- hestia_earth/models/ipcc2019/animal/fatContent.py +38 -0
- hestia_earth/models/ipcc2019/animal/liveweightGain.py +3 -54
- hestia_earth/models/ipcc2019/animal/liveweightPerHead.py +3 -54
- hestia_earth/models/ipcc2019/animal/pastureGrass.py +3 -1
- hestia_earth/models/ipcc2019/animal/pregnancyRateTotal.py +38 -0
- hestia_earth/models/ipcc2019/animal/trueProteinContent.py +38 -0
- hestia_earth/models/ipcc2019/animal/utils.py +87 -3
- hestia_earth/models/ipcc2019/animal/weightAtMaturity.py +4 -10
- hestia_earth/models/ipcc2019/co2ToAirAboveGroundBiomassStockChangeLandUseChange.py +191 -0
- hestia_earth/models/ipcc2019/co2ToAirBelowGroundBiomassStockChangeLandUseChange.py +204 -0
- hestia_earth/models/ipcc2019/co2ToAirCarbonStockChange_utils.py +255 -35
- hestia_earth/models/ipcc2019/co2ToAirSoilOrganicCarbonStockChangeManagementChange.py +63 -149
- hestia_earth/models/ipcc2019/pastureGrass.py +3 -1
- hestia_earth/models/mocking/search-results.json +2026 -26
- hestia_earth/models/pooreNemecek2018/landOccupationDuringCycle.py +1 -1
- hestia_earth/models/poschEtAl2008/terrestrialAcidificationPotentialAccumulatedExceedance.py +4 -1
- hestia_earth/models/poschEtAl2008/terrestrialEutrophicationPotentialAccumulatedExceedance.py +4 -1
- hestia_earth/models/site/management.py +3 -5
- hestia_earth/models/utils/__init__.py +5 -4
- hestia_earth/models/utils/impact_assessment.py +13 -4
- hestia_earth/models/utils/input.py +5 -2
- hestia_earth/models/utils/site.py +4 -2
- hestia_earth/models/version.py +1 -1
- {hestia_earth_models-0.64.7.dist-info → hestia_earth_models-0.64.9.dist-info}/METADATA +2 -2
- {hestia_earth_models-0.64.7.dist-info → hestia_earth_models-0.64.9.dist-info}/RECORD +58 -44
- tests/models/cycle/animal/test_milkYield.py +1 -14
- tests/models/environmentalFootprintV3/test_soilQualityIndexLandOccupation.py +97 -66
- tests/models/environmentalFootprintV3/test_soilQualityIndexLandTransformation.py +176 -0
- tests/models/environmentalFootprintV3/test_soilQualityIndexTotalLandUseEffects.py +55 -0
- tests/models/frischknechtEtAl2000/test_ionisingRadiationKbqU235Eq.py +67 -44
- tests/models/ipcc2019/animal/test_fatContent.py +22 -0
- tests/models/ipcc2019/animal/test_liveweightGain.py +4 -2
- tests/models/ipcc2019/animal/test_liveweightPerHead.py +4 -2
- tests/models/ipcc2019/animal/test_pregnancyRateTotal.py +22 -0
- tests/models/ipcc2019/animal/test_trueProteinContent.py +22 -0
- tests/models/ipcc2019/animal/test_weightAtMaturity.py +2 -1
- tests/models/ipcc2019/test_co2ToAirAboveGroundBiomassStockChangeLandUseChange.py +83 -0
- tests/models/ipcc2019/test_co2ToAirBelowGroundBiomassStockChangeLandUseChange.py +83 -0
- tests/models/ipcc2019/test_co2ToAirCarbonStockChange_utils.py +6 -6
- tests/models/ipcc2019/test_co2ToAirSoilOrganicCarbonStockChangeManagementChange.py +5 -4
- tests/models/poschEtAl2008/test_terrestrialAcidificationPotentialAccumulatedExceedance.py +30 -17
- tests/models/poschEtAl2008/test_terrestrialEutrophicationPotentialAccumulatedExceedance.py +28 -14
- tests/models/site/test_management.py +4 -1
- tests/models/utils/test_input.py +65 -1
- {hestia_earth_models-0.64.7.dist-info → hestia_earth_models-0.64.9.dist-info}/LICENSE +0 -0
- {hestia_earth_models-0.64.7.dist-info → hestia_earth_models-0.64.9.dist-info}/WHEEL +0 -0
- {hestia_earth_models-0.64.7.dist-info → hestia_earth_models-0.64.9.dist-info}/top_level.txt +0 -0
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from hestia_earth.schema import CycleFunctionalUnit, EmissionMethodTier, MeasurementMethodClassification, SiteSiteType
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from hestia_earth.models.log import logRequirements, logShouldRun
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from hestia_earth.models.utils.blank_node import cumulative_nodes_term_match
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from hestia_earth.models.utils.emission import _new_emission
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from .co2ToAirCarbonStockChange_utils import create_run_function, create_should_run_function
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from . import MODEL
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REQUIREMENTS = {
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"Cycle": {
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"site": {
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"measurements": [
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{
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"@type": "Measurement",
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"value": "",
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"dates": "",
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"depthUpper": "0",
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"depthLower": "30",
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"term.@id": "aboveGroundBiomass"
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}
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]
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},
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"functionalUnit": "1 ha",
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"endDate": "",
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"optional": {
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"startDate": ""
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}
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}
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}
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RETURNS = {
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"Emission": [{
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"value": "",
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"sd": "",
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"min": "",
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"max": "",
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"statsDefinition": "simulated",
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"observations": "",
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"methodTier": ""
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}]
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}
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TERM_ID = 'co2ToAirAboveGroundBiomassStockChangeLandUseChange'
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_CARBON_STOCK_TERM_ID = 'aboveGroundBiomass'
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_MEASUREMENT_METHOD_RANKING = [
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MeasurementMethodClassification.ON_SITE_PHYSICAL_MEASUREMENT,
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MeasurementMethodClassification.MODELLED_USING_OTHER_MEASUREMENTS,
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MeasurementMethodClassification.TIER_3_MODEL,
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MeasurementMethodClassification.TIER_2_MODEL,
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MeasurementMethodClassification.TIER_1_MODEL,
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MeasurementMethodClassification.GEOSPATIAL_DATASET
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]
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"""
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The list of `MeasurementMethodClassification`s that can be used to calculate SOC stock change emissions, ranked in
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order from strongest to weakest.
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"""
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_SITE_TYPE_SYSTEMS_MAPPING = {
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SiteSiteType.GLASS_OR_HIGH_ACCESSIBLE_COVER.value: [
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"protectedCroppingSystemSoilBased",
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"protectedCroppingSystemSoilAndSubstrateBased"
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]
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}
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def _emission(
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*,
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value: list[float],
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method_tier: EmissionMethodTier,
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sd: list[float] = None,
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min: list[float] = None,
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max: list[float] = None,
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statsDefinition: str = None,
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observations: list[int] = None
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) -> dict:
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"""
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Create an emission node based on the provided value and method tier.
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See [Emission schema](https://www.hestia.earth/schema/Emission) for more information.
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Parameters
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----------
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value : float
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The emission value (kg CO2 ha-1).
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sd : float
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The standard deviation (kg CO2 ha-1).
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method_tier : EmissionMethodTier
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The emission method tier.
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Returns
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-------
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dict
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The emission dictionary with keys 'depth', 'value', and 'methodTier'.
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"""
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update_dict = {
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"value": value,
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"sd": sd,
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"min": min,
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"max": max,
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"statsDefinition": statsDefinition,
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"observations": observations,
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"methodTier": method_tier.value
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}
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emission = _new_emission(TERM_ID, MODEL) | {
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key: value for key, value in update_dict.items() if value
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}
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return emission
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def run(cycle: dict) -> list[dict]:
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"""
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Run the `ipcc2019.co2ToAirAboveGroundBiomassStockChangeManagementChange`.
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Parameters
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----------
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cycle : dict
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A HESTIA (Cycle node)[https://www.hestia.earth/schema/Cycle].
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Returns
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-------
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list[dict]
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A list of [Emission nodes](https://www.hestia.earth/schema/Emission) containing model results.
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"""
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should_run_exec = create_should_run_function(
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_CARBON_STOCK_TERM_ID,
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_should_compile_inventory_func,
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measurement_method_ranking=_MEASUREMENT_METHOD_RANKING
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)
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run_exec = create_run_function(_emission)
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should_run, cycle_id, inventory, logs = should_run_exec(cycle)
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logRequirements(cycle, model=MODEL, term=TERM_ID, **logs)
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logShouldRun(cycle, MODEL, TERM_ID, should_run)
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return run_exec(cycle_id, inventory) if should_run else []
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def _should_compile_inventory_func(
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site: dict, cycles: list[dict], carbon_stock_measurements: list[dict]
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) -> tuple[bool, dict]:
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"""
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Determine whether a site is suitable and has enough data to compile a carbon stock inventory.
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Parameters
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----------
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site : dict
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A HESTIA (Site node)[https://www.hestia.earth/schema/Site]
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cycles : list[dict]
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A list of HESTIA (Cycle nodes)[https://www.hestia.earth/schema/Cycle] that are related to the site.
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carbon_stock_measurements : list[dict]
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A list of HESTIA carbon stock (Measurement nodes)[https://www.hestia.earth/schema/Measurement] that are related
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to the site.
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Returns
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-------
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tuple[bool, dict]
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`(should_run, logs)`.
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"""
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site_type = site.get("siteType")
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has_soil = site_type not in _SITE_TYPE_SYSTEMS_MAPPING or all(
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cumulative_nodes_term_match(
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cycle.get("practices", []),
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target_term_ids=_SITE_TYPE_SYSTEMS_MAPPING[site_type],
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cumulative_threshold=0
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) for cycle in cycles
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)
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has_stock_measurements = len(carbon_stock_measurements) > 0
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has_cycles = len(cycles) > 0
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has_functional_unit_1_ha = all(cycle.get('functionalUnit') == CycleFunctionalUnit._1_HA.value for cycle in cycles)
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should_run = all([
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has_soil,
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has_stock_measurements,
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has_cycles,
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has_functional_unit_1_ha
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])
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logs = {
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"site_type": site_type,
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"has_soil": has_soil,
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"carbon_stock_term": _CARBON_STOCK_TERM_ID,
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"has_stock_measurements": has_stock_measurements,
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"has_cycles": has_cycles,
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"has_functional_unit_1_ha": has_functional_unit_1_ha,
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}
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return should_run, logs
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from hestia_earth.schema import CycleFunctionalUnit, EmissionMethodTier, SiteSiteType
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from hestia_earth.models.log import logRequirements, logShouldRun
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from hestia_earth.models.utils.blank_node import cumulative_nodes_term_match
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from hestia_earth.models.utils.emission import _new_emission
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from .co2ToAirCarbonStockChange_utils import create_run_function, create_should_run_function
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from . import MODEL
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REQUIREMENTS = {
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"Cycle": {
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"site": {
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"measurements": [
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{
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"@type": "Measurement",
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"value": "",
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"dates": "",
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"depthUpper": "0",
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"depthLower": "30",
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"term.@id": " belowGroundBiomass"
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}
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]
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},
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"functionalUnit": "1 ha",
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"endDate": "",
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"optional": {
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"startDate": ""
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}
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}
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}
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RETURNS = {
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"Emission": [{
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"value": "",
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"sd": "",
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"min": "",
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"max": "",
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"statsDefinition": "simulated",
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"observations": "",
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"methodTier": "",
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"depth": "30"
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}]
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}
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TERM_ID = 'co2ToAirBelowGroundBiomassStockChangeLandUseChange'
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_DEPTH_UPPER = 0
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_DEPTH_LOWER = 30
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_CARBON_STOCK_TERM_ID = 'belowGroundBiomass'
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_SITE_TYPE_SYSTEMS_MAPPING = {
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SiteSiteType.GLASS_OR_HIGH_ACCESSIBLE_COVER.value: [
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"protectedCroppingSystemSoilBased",
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"protectedCroppingSystemSoilAndSubstrateBased"
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]
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}
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def _emission(
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*,
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value: list[float],
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method_tier: EmissionMethodTier,
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sd: list[float] = None,
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min: list[float] = None,
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max: list[float] = None,
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statsDefinition: str = None,
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observations: list[int] = None
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) -> dict:
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"""
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Create an emission node based on the provided value and method tier.
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See [Emission schema](https://www.hestia.earth/schema/Emission) for more information.
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+
|
|
73
|
+
Parameters
|
|
74
|
+
----------
|
|
75
|
+
value : float
|
|
76
|
+
The emission value (kg CO2 ha-1).
|
|
77
|
+
sd : float
|
|
78
|
+
The standard deviation (kg CO2 ha-1).
|
|
79
|
+
method_tier : EmissionMethodTier
|
|
80
|
+
The emission method tier.
|
|
81
|
+
|
|
82
|
+
Returns
|
|
83
|
+
-------
|
|
84
|
+
dict
|
|
85
|
+
The emission dictionary with keys 'depth', 'value', and 'methodTier'.
|
|
86
|
+
"""
|
|
87
|
+
update_dict = {
|
|
88
|
+
"value": value,
|
|
89
|
+
"sd": sd,
|
|
90
|
+
"min": min,
|
|
91
|
+
"max": max,
|
|
92
|
+
"statsDefinition": statsDefinition,
|
|
93
|
+
"observations": observations,
|
|
94
|
+
"methodTier": method_tier.value,
|
|
95
|
+
"depth": _DEPTH_LOWER
|
|
96
|
+
}
|
|
97
|
+
emission = _new_emission(TERM_ID, MODEL) | {
|
|
98
|
+
key: value for key, value in update_dict.items() if value
|
|
99
|
+
}
|
|
100
|
+
return emission
|
|
101
|
+
|
|
102
|
+
|
|
103
|
+
def run(cycle: dict) -> list[dict]:
|
|
104
|
+
"""
|
|
105
|
+
Run the `ipcc2019.co2ToAirBelowGroundBiomassStockChangeManagementChange`.
|
|
106
|
+
|
|
107
|
+
Parameters
|
|
108
|
+
----------
|
|
109
|
+
cycle : dict
|
|
110
|
+
A HESTIA (Cycle node)[https://www.hestia.earth/schema/Cycle].
|
|
111
|
+
|
|
112
|
+
Returns
|
|
113
|
+
-------
|
|
114
|
+
list[dict]
|
|
115
|
+
A list of [Emission nodes](https://www.hestia.earth/schema/Emission) containing model results.
|
|
116
|
+
"""
|
|
117
|
+
should_run_exec = create_should_run_function(
|
|
118
|
+
_CARBON_STOCK_TERM_ID,
|
|
119
|
+
_should_compile_inventory_func,
|
|
120
|
+
should_run_measurement_func=_should_run_measurement_func
|
|
121
|
+
)
|
|
122
|
+
|
|
123
|
+
run_exec = create_run_function(_emission)
|
|
124
|
+
|
|
125
|
+
should_run, cycle_id, inventory, logs = should_run_exec(cycle)
|
|
126
|
+
|
|
127
|
+
logRequirements(cycle, model=MODEL, term=TERM_ID, **logs)
|
|
128
|
+
logShouldRun(cycle, MODEL, TERM_ID, should_run)
|
|
129
|
+
|
|
130
|
+
return run_exec(cycle_id, inventory) if should_run else []
|
|
131
|
+
|
|
132
|
+
|
|
133
|
+
def _should_run_measurement_func(node: dict) -> bool:
|
|
134
|
+
"""
|
|
135
|
+
Validate a [Measurement](https://www.hestia.earth/schema/Measurement) to determine whether it is a valid
|
|
136
|
+
`organicCarbonPerHa` node.
|
|
137
|
+
|
|
138
|
+
Parameters
|
|
139
|
+
----------
|
|
140
|
+
node : dict
|
|
141
|
+
The node to be validated.
|
|
142
|
+
|
|
143
|
+
Returns
|
|
144
|
+
-------
|
|
145
|
+
bool
|
|
146
|
+
`True` if the node passes all validation criteria, `False` otherwise.
|
|
147
|
+
"""
|
|
148
|
+
return all([
|
|
149
|
+
node.get("depthLower") == _DEPTH_LOWER,
|
|
150
|
+
node.get("depthUpper") == _DEPTH_UPPER
|
|
151
|
+
])
|
|
152
|
+
|
|
153
|
+
|
|
154
|
+
def _should_compile_inventory_func(
|
|
155
|
+
site: dict, cycles: list[dict], carbon_stock_measurements: list[dict]
|
|
156
|
+
) -> tuple[bool, dict]:
|
|
157
|
+
"""
|
|
158
|
+
Determine whether a site is suitable and has enough data to compile a carbon stock inventory.
|
|
159
|
+
|
|
160
|
+
Parameters
|
|
161
|
+
----------
|
|
162
|
+
site : dict
|
|
163
|
+
A HESTIA (Site node)[https://www.hestia.earth/schema/Site]
|
|
164
|
+
cycles : list[dict]
|
|
165
|
+
A list of HESTIA (Cycle nodes)[https://www.hestia.earth/schema/Cycle] that are related to the site.
|
|
166
|
+
carbon_stock_measurements : list[dict]
|
|
167
|
+
A list of HESTIA carbon stock (Measurement nodes)[https://www.hestia.earth/schema/Measurement] that are related
|
|
168
|
+
to the site.
|
|
169
|
+
|
|
170
|
+
Returns
|
|
171
|
+
-------
|
|
172
|
+
tuple[bool, dict]
|
|
173
|
+
`(should_run, logs)`.
|
|
174
|
+
"""
|
|
175
|
+
site_type = site.get("siteType")
|
|
176
|
+
has_soil = site_type not in _SITE_TYPE_SYSTEMS_MAPPING or all(
|
|
177
|
+
cumulative_nodes_term_match(
|
|
178
|
+
cycle.get("practices", []),
|
|
179
|
+
target_term_ids=_SITE_TYPE_SYSTEMS_MAPPING[site_type],
|
|
180
|
+
cumulative_threshold=0
|
|
181
|
+
) for cycle in cycles
|
|
182
|
+
)
|
|
183
|
+
|
|
184
|
+
has_stock_measurements = len(carbon_stock_measurements) > 0
|
|
185
|
+
has_cycles = len(cycles) > 0
|
|
186
|
+
has_functional_unit_1_ha = all(cycle.get('functionalUnit') == CycleFunctionalUnit._1_HA.value for cycle in cycles)
|
|
187
|
+
|
|
188
|
+
should_run = all([
|
|
189
|
+
has_soil,
|
|
190
|
+
has_stock_measurements,
|
|
191
|
+
has_cycles,
|
|
192
|
+
has_functional_unit_1_ha
|
|
193
|
+
])
|
|
194
|
+
|
|
195
|
+
logs = {
|
|
196
|
+
"site_type": site_type,
|
|
197
|
+
"has_soil": has_soil,
|
|
198
|
+
"carbon_stock_term": _CARBON_STOCK_TERM_ID,
|
|
199
|
+
"has_stock_measurements": has_stock_measurements,
|
|
200
|
+
"has_cycles": has_cycles,
|
|
201
|
+
"has_functional_unit_1_ha": has_functional_unit_1_ha,
|
|
202
|
+
}
|
|
203
|
+
|
|
204
|
+
return should_run, logs
|