healthdatalayer 1.6.6__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (105) hide show
  1. healthdatalayer/__init__.py +0 -0
  2. healthdatalayer/config/__init__.py +0 -0
  3. healthdatalayer/config/config.py +24 -0
  4. healthdatalayer/config/db.py +12 -0
  5. healthdatalayer/config/vault.py +20 -0
  6. healthdatalayer/dtos/__init__.py +2 -0
  7. healthdatalayer/dtos/collaborator/__init__.py +0 -0
  8. healthdatalayer/dtos/collaborator/schedule_collaborator.py +13 -0
  9. healthdatalayer/dtos/medical_visit/__init__.py +0 -0
  10. healthdatalayer/dtos/medical_visit/medical_certificate.py +62 -0
  11. healthdatalayer/models/__init__.py +75 -0
  12. healthdatalayer/models/bridge_area_floor_branch/__init__.py +0 -0
  13. healthdatalayer/models/bridge_area_floor_branch/area.py +8 -0
  14. healthdatalayer/models/bridge_area_floor_branch/branch.py +16 -0
  15. healthdatalayer/models/bridge_area_floor_branch/bridge_area_floor_branch.py +27 -0
  16. healthdatalayer/models/bridge_area_floor_branch/floor.py +8 -0
  17. healthdatalayer/models/bridge_area_floor_branch/room.py +8 -0
  18. healthdatalayer/models/bridge_area_floor_branch/system.py +8 -0
  19. healthdatalayer/models/client/__init__.py +0 -0
  20. healthdatalayer/models/client/address.py +13 -0
  21. healthdatalayer/models/client/city.py +11 -0
  22. healthdatalayer/models/client/client.py +25 -0
  23. healthdatalayer/models/client/client_type.py +9 -0
  24. healthdatalayer/models/client/education.py +9 -0
  25. healthdatalayer/models/client/emergency_contact.py +17 -0
  26. healthdatalayer/models/client/gender.py +9 -0
  27. healthdatalayer/models/client/marriage_status.py +9 -0
  28. healthdatalayer/models/client/nationality.py +10 -0
  29. healthdatalayer/models/client/pathological_history.py +29 -0
  30. healthdatalayer/models/client/pet.py +16 -0
  31. healthdatalayer/models/client/profession.py +9 -0
  32. healthdatalayer/models/client/px.py +35 -0
  33. healthdatalayer/models/client/state.py +9 -0
  34. healthdatalayer/models/collaborator/__init__.py +0 -0
  35. healthdatalayer/models/collaborator/collaborator.py +33 -0
  36. healthdatalayer/models/collaborator/collaborator_speciality.py +8 -0
  37. healthdatalayer/models/collaborator/collaborator_type.py +9 -0
  38. healthdatalayer/models/collaborator/speciality.py +23 -0
  39. healthdatalayer/models/lab/__init__.py +0 -0
  40. healthdatalayer/models/lab/client_lab.py +13 -0
  41. healthdatalayer/models/lab/measure_lab.py +11 -0
  42. healthdatalayer/models/lab/medical_lab.py +17 -0
  43. healthdatalayer/models/medical_visit/__init__.py +0 -0
  44. healthdatalayer/models/medical_visit/medical_diagnosis.py +12 -0
  45. healthdatalayer/models/medical_visit/medical_diagnosis_visit.py +25 -0
  46. healthdatalayer/models/medical_visit/medical_drug.py +27 -0
  47. healthdatalayer/models/medical_visit/medical_drug_recipe.py +19 -0
  48. healthdatalayer/models/medical_visit/medical_recipe_visit.py +28 -0
  49. healthdatalayer/models/medical_visit/medical_visit.py +53 -0
  50. healthdatalayer/models/medical_visit/organ_system_review.py +28 -0
  51. healthdatalayer/models/medical_visit/physical_exam.py +45 -0
  52. healthdatalayer/models/medical_visit/status_visit_enum.py +8 -0
  53. healthdatalayer/models/medical_visit/visit_triage.py +28 -0
  54. healthdatalayer/models/user/__init__.py +0 -0
  55. healthdatalayer/models/user/permission.py +27 -0
  56. healthdatalayer/models/user/permission_user.py +8 -0
  57. healthdatalayer/models/user/role.py +27 -0
  58. healthdatalayer/models/user/role_permission.py +8 -0
  59. healthdatalayer/models/user/role_user.py +8 -0
  60. healthdatalayer/models/user/user.py +30 -0
  61. healthdatalayer/repositories/__init__.py +40 -0
  62. healthdatalayer/repositories/client_repositories/__init__.py +0 -0
  63. healthdatalayer/repositories/client_repositories/address_repository.py +94 -0
  64. healthdatalayer/repositories/client_repositories/client_type_repository.py +69 -0
  65. healthdatalayer/repositories/client_repositories/education_repository.py +70 -0
  66. healthdatalayer/repositories/client_repositories/emergency_contact_repository.py +78 -0
  67. healthdatalayer/repositories/client_repositories/gender_repository.py +70 -0
  68. healthdatalayer/repositories/client_repositories/marriage_status_repository.py +70 -0
  69. healthdatalayer/repositories/client_repositories/nationality_repository.py +69 -0
  70. healthdatalayer/repositories/client_repositories/pathological_history_repository.py +73 -0
  71. healthdatalayer/repositories/client_repositories/pet_repository.py +126 -0
  72. healthdatalayer/repositories/client_repositories/profession_repository.py +70 -0
  73. healthdatalayer/repositories/client_repositories/px_repository.py +239 -0
  74. healthdatalayer/repositories/collaborator_repositories/__init__.py +0 -0
  75. healthdatalayer/repositories/collaborator_repositories/collaborator_repository.py +197 -0
  76. healthdatalayer/repositories/collaborator_repositories/collaborator_type_repository.py +69 -0
  77. healthdatalayer/repositories/collaborator_repositories/speciality_repository.py +75 -0
  78. healthdatalayer/repositories/infraestructure_repositories/__init__.py +0 -0
  79. healthdatalayer/repositories/infraestructure_repositories/area_repository.py +69 -0
  80. healthdatalayer/repositories/infraestructure_repositories/branch_repository.py +69 -0
  81. healthdatalayer/repositories/infraestructure_repositories/bridge_repository.py +82 -0
  82. healthdatalayer/repositories/infraestructure_repositories/floor_repository.py +69 -0
  83. healthdatalayer/repositories/infraestructure_repositories/room_repository.py +69 -0
  84. healthdatalayer/repositories/infraestructure_repositories/system_repository.py +69 -0
  85. healthdatalayer/repositories/lab_repositories/__init__.py +0 -0
  86. healthdatalayer/repositories/lab_repositories/measure_lab_repository.py +80 -0
  87. healthdatalayer/repositories/lab_repositories/medical_lab_repository.py +254 -0
  88. healthdatalayer/repositories/medical_visit_repositories/__init__.py +0 -0
  89. healthdatalayer/repositories/medical_visit_repositories/medical_diagnosis_repository.py +98 -0
  90. healthdatalayer/repositories/medical_visit_repositories/medical_diagnosis_visit_repository.py +109 -0
  91. healthdatalayer/repositories/medical_visit_repositories/medical_drug_recipe_repository.py +71 -0
  92. healthdatalayer/repositories/medical_visit_repositories/medical_drug_repository.py +78 -0
  93. healthdatalayer/repositories/medical_visit_repositories/medical_recipe_visit_repository.py +93 -0
  94. healthdatalayer/repositories/medical_visit_repositories/medical_visit_repository.py +509 -0
  95. healthdatalayer/repositories/medical_visit_repositories/organ_system_review_repository.py +89 -0
  96. healthdatalayer/repositories/medical_visit_repositories/physical_exam_repository.py +89 -0
  97. healthdatalayer/repositories/medical_visit_repositories/visit_triage_repository.py +95 -0
  98. healthdatalayer/repositories/user_repositories/__init__.py +0 -0
  99. healthdatalayer/repositories/user_repositories/permission_repository.py +238 -0
  100. healthdatalayer/repositories/user_repositories/role_repository.py +174 -0
  101. healthdatalayer/repositories/user_repositories/user_repository.py +251 -0
  102. healthdatalayer-1.6.6.dist-info/METADATA +30 -0
  103. healthdatalayer-1.6.6.dist-info/RECORD +105 -0
  104. healthdatalayer-1.6.6.dist-info/WHEEL +5 -0
  105. healthdatalayer-1.6.6.dist-info/top_level.txt +1 -0
@@ -0,0 +1,254 @@
1
+ from typing import Optional, List
2
+ from uuid import UUID
3
+ from sqlmodel import select
4
+
5
+ from healthdatalayer.models import MedicalLab
6
+ from healthdatalayer.models import Px
7
+ from healthdatalayer.config.db import engines, get_session
8
+
9
+ class MedicalLabRepository:
10
+ def __init__(self, tenant: str):
11
+ self.tenant = tenant
12
+ if tenant not in engines:
13
+ raise ValueError(f"Tenant {tenant} is not configured")
14
+
15
+ def create_command(self, medical_lab: MedicalLab) -> MedicalLab:
16
+ with get_session(self.tenant) as session:
17
+ session.add(medical_lab)
18
+ session.commit()
19
+ session.refresh(medical_lab)
20
+ return medical_lab
21
+
22
+ def get_by_id_command(self, medical_lab_id: UUID, load_relations: bool = False) -> Optional[MedicalLab]:
23
+ with get_session(self.tenant) as session:
24
+ medical_lab = session.get(MedicalLab, medical_lab_id)
25
+
26
+ if medical_lab and load_relations:
27
+ if medical_lab.measure_lab_id:
28
+ from healthdatalayer.models import MeasureLab
29
+ measure_lab_obj = session.get(MeasureLab, medical_lab.measure_lab_id)
30
+ object.__setattr__(medical_lab, 'measure_lab', measure_lab_obj)
31
+
32
+ from healthdatalayer.models.lab.client_lab import ClientLab
33
+ statement = select(ClientLab).where(ClientLab.medical_lab_id == medical_lab_id)
34
+ client_labs = session.exec(statement).all()
35
+
36
+ pxs_list = []
37
+ for cl in client_labs:
38
+ px = session.get(Px, cl.client_id)
39
+ if px:
40
+ pxs_list.append(px)
41
+
42
+ object.__setattr__(medical_lab, 'pxs', pxs_list)
43
+
44
+ return medical_lab
45
+
46
+ def get_by_parameter_command(self, parameter: str, load_relations: bool = False) -> Optional[MedicalLab]:
47
+ with get_session(self.tenant) as session:
48
+ statement = select(MedicalLab).where(MedicalLab.parameter == parameter)
49
+ medical_lab = session.exec(statement).first()
50
+
51
+ if medical_lab and load_relations:
52
+ if medical_lab.measure_lab_id:
53
+ from healthdatalayer.models import MeasureLab
54
+ measure_lab_obj = session.get(MeasureLab, medical_lab.measure_lab_id)
55
+ object.__setattr__(medical_lab, 'measure_lab', measure_lab_obj)
56
+
57
+ from healthdatalayer.models.lab.client_lab import ClientLab
58
+ statement_cl = select(ClientLab).where(ClientLab.medical_lab_id == medical_lab.medical_lab_id)
59
+ client_labs = session.exec(statement_cl).all()
60
+
61
+ pxs_list = []
62
+ for cl in client_labs:
63
+ px = session.get(Px, cl.client_id)
64
+ if px:
65
+ pxs_list.append(px)
66
+
67
+ object.__setattr__(medical_lab, 'pxs', pxs_list)
68
+
69
+ return medical_lab
70
+
71
+ def search_by_parameter_command(self, parameter: str, load_relations: bool = False) -> List[MedicalLab]:
72
+ with get_session(self.tenant) as session:
73
+ statement = select(MedicalLab).where(MedicalLab.parameter.ilike(f"%{parameter}%"))
74
+ results = session.exec(statement).all()
75
+
76
+ if load_relations:
77
+ from healthdatalayer.models import MeasureLab
78
+ from healthdatalayer.models.lab.client_lab import ClientLab
79
+
80
+ for medical_lab in results:
81
+ if medical_lab.measure_lab_id:
82
+ measure_lab_obj = session.get(MeasureLab, medical_lab.measure_lab_id)
83
+ object.__setattr__(medical_lab, 'measure_lab', measure_lab_obj)
84
+
85
+ statement_cl = select(ClientLab).where(ClientLab.medical_lab_id == medical_lab.medical_lab_id)
86
+ client_labs = session.exec(statement_cl).all()
87
+
88
+ pxs_list = []
89
+ for cl in client_labs:
90
+ px = session.get(Px, cl.client_id)
91
+ if px:
92
+ pxs_list.append(px)
93
+
94
+ object.__setattr__(medical_lab, 'pxs', pxs_list)
95
+
96
+ return results
97
+
98
+ def list_all_command(self, active_only: bool = True, load_relations: bool = False) -> List[MedicalLab]:
99
+ with get_session(self.tenant) as session:
100
+ statement = select(MedicalLab)
101
+
102
+ if active_only:
103
+ statement = statement.where(MedicalLab.is_active == True)
104
+
105
+ results = session.exec(statement).all()
106
+
107
+ if load_relations:
108
+ from healthdatalayer.models import MeasureLab
109
+ from healthdatalayer.models.lab.client_lab import ClientLab
110
+
111
+ for medical_lab in results:
112
+ if medical_lab.measure_lab_id:
113
+ measure_lab_obj = session.get(MeasureLab, medical_lab.measure_lab_id)
114
+ object.__setattr__(medical_lab, 'measure_lab', measure_lab_obj)
115
+
116
+ statement_cl = select(ClientLab).where(ClientLab.medical_lab_id == medical_lab.medical_lab_id)
117
+ client_labs = session.exec(statement_cl).all()
118
+
119
+ pxs_list = []
120
+ for cl in client_labs:
121
+ px = session.get(Px, cl.client_id)
122
+ if px:
123
+ pxs_list.append(px)
124
+
125
+ object.__setattr__(medical_lab, 'pxs', pxs_list)
126
+
127
+ return results
128
+
129
+ def list_by_measure_lab_command(self, measure_lab_id: UUID, active_only: bool = True) -> List[MedicalLab]:
130
+ with get_session(self.tenant) as session:
131
+ statement = select(MedicalLab).where(MedicalLab.measure_lab_id == measure_lab_id)
132
+
133
+ if active_only:
134
+ statement = statement.where(MedicalLab.is_active == True)
135
+
136
+ results = session.exec(statement)
137
+ return results.all()
138
+
139
+ def update_command(self, medical_lab: MedicalLab) -> MedicalLab:
140
+ with get_session(self.tenant) as session:
141
+ db_medical_lab = session.merge(medical_lab)
142
+ session.commit()
143
+ session.refresh(db_medical_lab)
144
+ return db_medical_lab
145
+
146
+ def delete_command(self, medical_lab_id: UUID, soft_delete: bool = True) -> bool:
147
+ with get_session(self.tenant) as session:
148
+ db_medical_lab = session.get(MedicalLab, medical_lab_id)
149
+ if not db_medical_lab:
150
+ return False
151
+
152
+ if soft_delete:
153
+ db_medical_lab.is_active = False
154
+ session.add(db_medical_lab)
155
+ else:
156
+ session.delete(db_medical_lab)
157
+
158
+ session.commit()
159
+ return True
160
+
161
+ def count_command(self, active_only: bool = True) -> int:
162
+ with get_session(self.tenant) as session:
163
+ statement = select(MedicalLab)
164
+ if active_only:
165
+ statement = statement.where(MedicalLab.is_active == True)
166
+ results = session.exec(statement)
167
+ return len(results.all())
168
+
169
+ def exists_by_parameter_command(self, parameter: str) -> bool:
170
+ with get_session(self.tenant) as session:
171
+ statement = select(MedicalLab).where(MedicalLab.parameter == parameter)
172
+ result = session.exec(statement).first()
173
+ return result is not None
174
+
175
+ def get_medical_lab_patients_command(self, medical_lab_id: UUID) -> List[Px]:
176
+ """Get all patients associated with a medical lab"""
177
+ with get_session(self.tenant) as session:
178
+ from healthdatalayer.models.lab.client_lab import ClientLab
179
+
180
+ statement = select(ClientLab).where(ClientLab.medical_lab_id == medical_lab_id)
181
+ client_labs = session.exec(statement).all()
182
+
183
+ pxs_list = []
184
+ for cl in client_labs:
185
+ px = session.get(Px, cl.client_id)
186
+ if px:
187
+ pxs_list.append(px)
188
+
189
+ return pxs_list
190
+
191
+ def assign_patient_command(self, medical_lab_id: UUID, px_id: UUID) -> Optional[MedicalLab]:
192
+ """Assign a patient to a medical lab"""
193
+ with get_session(self.tenant) as session:
194
+ from healthdatalayer.models.lab.client_lab import ClientLab
195
+
196
+ medical_lab = session.get(MedicalLab, medical_lab_id)
197
+ if not medical_lab:
198
+ return None
199
+
200
+ px = session.get(Px, px_id)
201
+ if not px:
202
+ return None
203
+
204
+ existing = session.exec(
205
+ select(ClientLab).where(
206
+ ClientLab.medical_lab_id == medical_lab_id,
207
+ ClientLab.client_id == px_id
208
+ )
209
+ ).first()
210
+
211
+ if not existing:
212
+ client_lab = ClientLab(medical_lab_id=medical_lab_id, client_id=px_id)
213
+ session.add(client_lab)
214
+ session.commit()
215
+
216
+ session.refresh(medical_lab)
217
+ return medical_lab
218
+
219
+ def remove_patient_command(self, medical_lab_id: UUID, px_id: UUID) -> Optional[MedicalLab]:
220
+ """Remove a patient from a medical lab"""
221
+ with get_session(self.tenant) as session:
222
+ from healthdatalayer.models.lab.client_lab import ClientLab
223
+
224
+ medical_lab = session.get(MedicalLab, medical_lab_id)
225
+ if not medical_lab:
226
+ return None
227
+
228
+ client_lab = session.exec(
229
+ select(ClientLab).where(
230
+ ClientLab.medical_lab_id == medical_lab_id,
231
+ ClientLab.client_id == px_id
232
+ )
233
+ ).first()
234
+
235
+ if client_lab:
236
+ session.delete(client_lab)
237
+ session.commit()
238
+
239
+ session.refresh(medical_lab)
240
+ return medical_lab
241
+
242
+ def is_patient_assigned_command(self, medical_lab_id: UUID, px_id: UUID) -> bool:
243
+ """Check if a patient is assigned to a medical lab"""
244
+ with get_session(self.tenant) as session:
245
+ from healthdatalayer.models.lab.client_lab import ClientLab
246
+
247
+ result = session.exec(
248
+ select(ClientLab).where(
249
+ ClientLab.medical_lab_id == medical_lab_id,
250
+ ClientLab.client_id == px_id
251
+ )
252
+ ).first()
253
+
254
+ return result is not None
@@ -0,0 +1,98 @@
1
+ from typing import Optional, List
2
+ from uuid import UUID
3
+ from sqlmodel import select, or_
4
+
5
+ from healthdatalayer.models import MedicalDiagnosis
6
+ from healthdatalayer.config.db import engines, get_session
7
+
8
+ class MedicalDiagnosisRepository:
9
+ def __init__(self, tenant: str):
10
+ self.tenant = tenant
11
+ if tenant not in engines:
12
+ raise ValueError(f"Tenant {tenant} is not configured")
13
+
14
+ def create_command(self, medical_diagnosis: MedicalDiagnosis) -> MedicalDiagnosis:
15
+ with get_session(self.tenant) as session:
16
+ session.add(medical_diagnosis)
17
+ session.commit()
18
+ session.refresh(medical_diagnosis)
19
+ return medical_diagnosis
20
+
21
+ def get_by_id_command(self, medical_diagnosis_id: UUID) -> Optional[MedicalDiagnosis]:
22
+ with get_session(self.tenant) as session:
23
+ return session.get(MedicalDiagnosis, medical_diagnosis_id)
24
+
25
+ def get_by_name_command(self, name:str, active_only: bool = True) -> Optional[MedicalDiagnosis]:
26
+ with get_session(self.tenant) as session:
27
+ statement = select(MedicalDiagnosis).where(MedicalDiagnosis.name == name)
28
+
29
+ if active_only:
30
+ statement = statement.where(MedicalDiagnosis.is_active == True)
31
+
32
+ medical_diagnosis = session.exec(statement).first()
33
+ return medical_diagnosis
34
+
35
+ def get_by_name_code_ilike_command(self, name:str, active_only: bool = True) -> List[MedicalDiagnosis]:
36
+ with get_session(self.tenant) as session:
37
+ statement = select(MedicalDiagnosis).where(
38
+ or_(
39
+ MedicalDiagnosis.name.ilike(f"%{name}%"),
40
+ MedicalDiagnosis.cie_10_code.ilike(f"%{name}%")
41
+ )
42
+ )
43
+
44
+ if active_only:
45
+ statement = statement.where(MedicalDiagnosis.is_active == True)
46
+
47
+ medical_diagnosis = session.exec(statement).all()
48
+ return medical_diagnosis
49
+
50
+ def get_by_code_command(self, code:str, active_only: bool = True) -> Optional[MedicalDiagnosis]:
51
+ with get_session(self.tenant) as session:
52
+ statement = select(MedicalDiagnosis).where(MedicalDiagnosis.cie_10_code == code)
53
+
54
+ if active_only:
55
+ statement = statement.where(MedicalDiagnosis.is_active == True)
56
+
57
+ medical_diagnosis = session.exec(statement).first()
58
+ return medical_diagnosis
59
+
60
+ def list_all_command(self, active_only: bool = True) -> List[MedicalDiagnosis]:
61
+ with get_session(self.tenant) as session:
62
+ statement = select(MedicalDiagnosis)
63
+
64
+ if active_only:
65
+ statement = statement.where(MedicalDiagnosis.is_active == True)
66
+
67
+ results = session.exec(statement)
68
+ return results.all()
69
+
70
+ def update_command(self, medical_diagnosis_id: UUID, **kwargs) -> Optional[MedicalDiagnosis]:
71
+ with get_session(self.tenant) as session:
72
+ db_medical_diagnosis = session.get(MedicalDiagnosis, medical_diagnosis_id)
73
+ if not db_medical_diagnosis:
74
+ return None
75
+
76
+ for key, value in kwargs.items():
77
+ if hasattr(db_medical_diagnosis, key):
78
+ setattr(db_medical_diagnosis, key, value)
79
+
80
+ session.add(db_medical_diagnosis)
81
+ session.commit()
82
+ session.refresh(db_medical_diagnosis)
83
+ return db_medical_diagnosis
84
+
85
+ def delete_command(self, medical_diagnosis_id: UUID, soft_delete: bool = True) -> bool:
86
+ with get_session(self.tenant) as session:
87
+ db_medical_diagnosis = session.get(MedicalDiagnosis, medical_diagnosis_id)
88
+ if not db_medical_diagnosis:
89
+ return False
90
+
91
+ if soft_delete:
92
+ db_medical_diagnosis.is_active = False
93
+ session.add(db_medical_diagnosis)
94
+ else:
95
+ session.delete(db_medical_diagnosis)
96
+
97
+ session.commit()
98
+ return True
@@ -0,0 +1,109 @@
1
+ from typing import Optional, List
2
+ from uuid import UUID
3
+ from sqlmodel import select, or_
4
+ from sqlalchemy.orm import selectinload,joinedload
5
+ from healthdatalayer.models import MedicalDiagnosisVisit
6
+ from healthdatalayer.models import MedicalVisit
7
+ from healthdatalayer.config.db import engines, get_session
8
+
9
+ class MedicalDiagnosisVisitRepository:
10
+ def __init__(self, tenant: str):
11
+ self.tenant = tenant
12
+ if tenant not in engines:
13
+ raise ValueError(f"Tenant {tenant} is not configured")
14
+
15
+ def create_command(self, medical_diagnosis_visit: MedicalDiagnosisVisit) -> MedicalDiagnosisVisit:
16
+ with get_session(self.tenant) as session:
17
+ session.add(medical_diagnosis_visit)
18
+ session.commit()
19
+ session.refresh(medical_diagnosis_visit)
20
+ return medical_diagnosis_visit
21
+
22
+ def get_by_id_command(self, medical_diagnosis_visit_id: UUID, load_relations: bool = False) -> Optional[MedicalDiagnosisVisit]:
23
+ with get_session(self.tenant) as session:
24
+
25
+ if load_relations:
26
+ statement = select(MedicalDiagnosisVisit).where(MedicalDiagnosisVisit.medical_diagnosis_visit_id == medical_diagnosis_visit_id).options(
27
+ joinedload(MedicalDiagnosisVisit.medical_visit),
28
+ joinedload(MedicalDiagnosisVisit.medical_diagnosis)
29
+ )
30
+ medical_diagnosis_visit = session.exec(statement).first()
31
+
32
+ return medical_diagnosis_visit
33
+ else:
34
+ return session.get(MedicalDiagnosisVisit, medical_diagnosis_visit_id)
35
+
36
+ def get_by_medical_visit_id_command(self, medical_visit_id: UUID, load_relations: bool = False) ->List[MedicalDiagnosisVisit]:
37
+ with get_session(self.tenant) as session:
38
+
39
+ statement = select(MedicalDiagnosisVisit).where(MedicalDiagnosisVisit.medical_visit_id == medical_visit_id)
40
+ if load_relations:
41
+ statement = statement.options(
42
+ joinedload(MedicalDiagnosisVisit.medical_visit),
43
+ joinedload(MedicalDiagnosisVisit.medical_diagnosis)
44
+ )
45
+ medical_diagnosis_visits = session.exec(statement).all()
46
+
47
+ return medical_diagnosis_visits
48
+
49
+ def get_by_medicalvisitid_and_diagnosisid_command(self, medical_visit_id: UUID, medical_diagnosis_id: UUID, load_relations: bool = False) ->Optional[MedicalDiagnosisVisit]:
50
+ with get_session(self.tenant) as session:
51
+
52
+ statement = select(MedicalDiagnosisVisit).where(
53
+ MedicalDiagnosisVisit.medical_visit_id == medical_visit_id,
54
+ MedicalDiagnosisVisit.medical_diagnosis_id == medical_diagnosis_id
55
+ )
56
+
57
+ if load_relations:
58
+ statement = statement.options(
59
+ joinedload(MedicalDiagnosisVisit.medical_visit),
60
+ joinedload(MedicalDiagnosisVisit.medical_diagnosis)
61
+ )
62
+ medical_diagnosis_visit = session.exec(statement).first()
63
+
64
+ return medical_diagnosis_visit
65
+
66
+ def list_all_command(self, active_only: bool = True,load_related: bool = False) -> List[MedicalDiagnosisVisit]:
67
+ with get_session(self.tenant) as session:
68
+
69
+ statement = select(MedicalDiagnosisVisit)
70
+
71
+ if load_related:
72
+ statement = select(MedicalDiagnosisVisit).options(
73
+ selectinload(MedicalDiagnosisVisit.medical_visit),
74
+ joinedload(MedicalDiagnosisVisit.medical_diagnosis)
75
+ )
76
+
77
+ if active_only:
78
+ statement = statement.where(MedicalDiagnosisVisit.is_active == True)
79
+ medical_diagnosis_visit = session.exec(statement).all()
80
+
81
+ return medical_diagnosis_visit
82
+
83
+ def update_command(self, medical_diagnosis_visit: MedicalDiagnosisVisit) -> MedicalDiagnosisVisit:
84
+ with get_session(self.tenant) as session:
85
+ existing_medical_diagnosis_visit = session.get(MedicalDiagnosisVisit, medical_diagnosis_visit.medical_diagnosis_visit_id)
86
+ if not existing_medical_diagnosis_visit:
87
+ raise ValueError(f"MedicalDiagnosisVisit with id {medical_diagnosis_visit.medical_diagnosis_visit_id} does not exist")
88
+
89
+ for key, value in medical_diagnosis_visit.dict(exclude_unset=True).items():
90
+ setattr(existing_medical_diagnosis_visit, key, value)
91
+
92
+ bd_medical_diagnosis_visit = session.merge(existing_medical_diagnosis_visit)
93
+ session.commit()
94
+ session.refresh(bd_medical_diagnosis_visit)
95
+ return bd_medical_diagnosis_visit
96
+
97
+ def delete_command(self, medical_diagnosis_visit_id: UUID, soft_delete: bool = False)->None:
98
+ with get_session(self.tenant) as session:
99
+ existing_medical_diagnosis_visit = session.get(MedicalDiagnosisVisit, medical_diagnosis_visit_id)
100
+ if not existing_medical_diagnosis_visit:
101
+ raise ValueError(f"MedicalDiagnosisVisit with id {medical_diagnosis_visit_id} does not exist")
102
+
103
+ if soft_delete:
104
+ existing_medical_diagnosis_visit.is_active = False
105
+ session.add(existing_medical_diagnosis_visit)
106
+ else:
107
+ session.delete(existing_medical_diagnosis_visit)
108
+
109
+ session.commit()
@@ -0,0 +1,71 @@
1
+ from typing import Optional, List
2
+ from uuid import UUID
3
+ from sqlmodel import select
4
+ from sqlalchemy.orm import selectinload,joinedload
5
+ from healthdatalayer.models import MedicalDrugRecipe
6
+ from healthdatalayer.config.db import engines, get_session
7
+
8
+ class MedicalDrugRecipeRepository:
9
+ def __init__(self, tenant: str):
10
+ self.tenant = tenant
11
+ if tenant not in engines:
12
+ raise ValueError(f"Tenant {tenant} is not configured")
13
+ def create_command(self, medical_drug_recipe: MedicalDrugRecipe) -> MedicalDrugRecipe:
14
+ with get_session(self.tenant) as session:
15
+ session.add(medical_drug_recipe)
16
+ session.commit()
17
+ session.refresh(medical_drug_recipe)
18
+ return medical_drug_recipe
19
+
20
+ def get_by_id_command(self, medical_drug_recipe_id: UUID) -> Optional[MedicalDrugRecipe]:
21
+ with get_session(self.tenant) as session:
22
+ statement = select(MedicalDrugRecipe).where(MedicalDrugRecipe.medical_drug_recipe_id == medical_drug_recipe_id)
23
+ return session.exec(statement).first()
24
+
25
+ def list_all_command(self, active_only: bool = True)->List[MedicalDrugRecipe]:
26
+ with get_session(self.tenant) as session:
27
+
28
+ statement = select(MedicalDrugRecipe)
29
+ if active_only:
30
+ statement = statement.where(MedicalDrugRecipe.is_active == True)
31
+
32
+ return session.exec(statement).all()
33
+
34
+ def get_by_medical_recipe_visit_id_command(self, medical_recipe_visit_id: UUID,active_only: bool = True)-> List[MedicalDrugRecipe]:
35
+ with get_session(self.tenant) as session:
36
+ statement = select(MedicalDrugRecipe).where(MedicalDrugRecipe.medical_recipe_visit_id == medical_recipe_visit_id)
37
+ if active_only:
38
+ statement = statement.where(MedicalDrugRecipe.is_active == True)
39
+
40
+ return session.exec(statement).all()
41
+
42
+ def update_command(self, medical_drug_recipe_id: UUID, **kwargs) -> Optional[MedicalDrugRecipe]:
43
+ with get_session(self.tenant) as session:
44
+ db_medical_drug_recipe = session.get(MedicalDrugRecipe, medical_drug_recipe_id)
45
+ if not db_medical_drug_recipe:
46
+ return None
47
+
48
+ for key, value in kwargs.items():
49
+ if hasattr(db_medical_drug_recipe, key):
50
+ setattr(db_medical_drug_recipe, key, value)
51
+
52
+ session.add(db_medical_drug_recipe)
53
+ session.commit()
54
+ session.refresh(db_medical_drug_recipe)
55
+ return db_medical_drug_recipe
56
+
57
+ def delete_command(self, medical_drug_recipe_id: UUID, soft_delete: bool = True) -> bool:
58
+ with get_session(self.tenant) as session:
59
+ statement = select(MedicalDrugRecipe).where(MedicalDrugRecipe.medical_drug_recipe_id == medical_drug_recipe_id)
60
+ db_medical_drug_recipe = session.exec(statement).first()
61
+ if not db_medical_drug_recipe:
62
+ return False
63
+
64
+ if soft_delete:
65
+ db_medical_drug_recipe.is_active = False
66
+ session.add(db_medical_drug_recipe)
67
+ else:
68
+ session.delete(db_medical_drug_recipe)
69
+
70
+ session.commit()
71
+ return True
@@ -0,0 +1,78 @@
1
+ from typing import Optional, List
2
+ from uuid import UUID
3
+ from sqlmodel import select,or_
4
+
5
+ from healthdatalayer.models import MedicalDrug
6
+ from healthdatalayer.config.db import engines, get_session
7
+
8
+ class MedicalDrugRepository:
9
+ def __init__(self, tenant: str):
10
+ self.tenant = tenant
11
+ if tenant not in engines:
12
+ raise ValueError(f"Tenant {tenant} is not configured")
13
+
14
+ def create_command(self, medical_drug: MedicalDrug) -> MedicalDrug:
15
+ with get_session(self.tenant) as session:
16
+ session.add(medical_drug)
17
+ session.commit()
18
+ session.refresh(medical_drug)
19
+ return medical_drug
20
+
21
+ def get_by_id_command(self, medical_drug_id: UUID) -> Optional[MedicalDrug]:
22
+ with get_session(self.tenant) as session:
23
+ return session.get(MedicalDrug, medical_drug_id)
24
+
25
+ def list_all_command(self, active_only: bool = True) -> List[MedicalDrug]:
26
+ with get_session(self.tenant) as session:
27
+ statement = select(MedicalDrug)
28
+
29
+ if active_only:
30
+ statement = statement.where(MedicalDrug.is_active == True)
31
+
32
+ results = session.exec(statement)
33
+ return results.all()
34
+
35
+ def update_command(self, medical_drug_id: UUID, **kwargs) -> Optional[MedicalDrug]:
36
+ with get_session(self.tenant) as session:
37
+ db_medical_drug = session.get(MedicalDrug, medical_drug_id)
38
+ if not db_medical_drug:
39
+ return None
40
+
41
+ for key, value in kwargs.items():
42
+ if hasattr(db_medical_drug, key):
43
+ setattr(db_medical_drug, key, value)
44
+
45
+ session.add(db_medical_drug)
46
+ session.commit()
47
+ session.refresh(db_medical_drug)
48
+ return db_medical_drug
49
+
50
+ def delete_command(self, medical_drug_id: UUID, soft_delete: bool = True) -> bool:
51
+ with get_session(self.tenant) as session:
52
+ db_medical_drug = session.get(MedicalDrug, medical_drug_id)
53
+ if not db_medical_drug:
54
+ return False
55
+
56
+ if soft_delete:
57
+ db_medical_drug.is_active = False
58
+ session.add(db_medical_drug)
59
+ else:
60
+ session.delete(db_medical_drug)
61
+
62
+ session.commit()
63
+ return True
64
+
65
+ def get_by_name_code_ilike_command(self, name:str, active_only: bool = True) -> List[MedicalDrug]:
66
+ with get_session(self.tenant) as session:
67
+ statement = select(MedicalDrug).where(
68
+ or_(
69
+ MedicalDrug.drug_name.ilike(f"%{name}%"),
70
+ MedicalDrug.drug_code.ilike(f"%{name}%")
71
+ )
72
+ )
73
+
74
+ if active_only:
75
+ statement = statement.where(MedicalDrug.is_active == True)
76
+
77
+ medical_diagnosis = session.exec(statement).all()
78
+ return medical_diagnosis