hccinfhir 0.0.1__py3-none-any.whl → 0.0.3__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- hccinfhir/__init__.py +1 -1
- hccinfhir/data/__init__.py +1 -1
- hccinfhir/data/ra_eligible_cpt_hcpcs_2023.csv +6646 -0
- hccinfhir/data/sample_837_0.txt +175 -0
- hccinfhir/data/sample_837_1.txt +49 -0
- hccinfhir/data/sample_837_10.txt +42 -0
- hccinfhir/data/sample_837_11.txt +29 -0
- hccinfhir/data/sample_837_2.txt +41 -0
- hccinfhir/data/sample_837_3.txt +40 -0
- hccinfhir/data/sample_837_4.txt +38 -0
- hccinfhir/data/sample_837_5.txt +48 -0
- hccinfhir/data/sample_837_6.txt +52 -0
- hccinfhir/data/sample_837_7.txt +47 -0
- hccinfhir/data/sample_837_8.txt +45 -0
- hccinfhir/data/sample_837_9.txt +50 -0
- hccinfhir/data/sample_eob_200.ndjson +200 -0
- hccinfhir/extractor.py +45 -116
- hccinfhir/extractor_837.py +175 -0
- hccinfhir/extractor_fhir.py +193 -0
- hccinfhir/filter.py +43 -0
- hccinfhir/models.py +44 -0
- hccinfhir-0.0.3.dist-info/METADATA +179 -0
- hccinfhir-0.0.3.dist-info/RECORD +28 -0
- hccinfhir-0.0.1.dist-info/METADATA +0 -89
- hccinfhir-0.0.1.dist-info/RECORD +0 -10
- {hccinfhir-0.0.1.dist-info → hccinfhir-0.0.3.dist-info}/WHEEL +0 -0
- {hccinfhir-0.0.1.dist-info → hccinfhir-0.0.3.dist-info}/licenses/LICENSE +0 -0
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Metadata-Version: 2.3
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Name: hccinfhir
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Version: 0.0.3
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Summary: HCC Algorithm for FHIR Resources
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Project-URL: Homepage, https://github.com/mimilabs/hccinfhir
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Project-URL: Issues, https://github.com/mimilabs/hccinfhir/issues
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Author-email: Yubin Park <yubin.park@mimilabs.ai>
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Classifier: License :: OSI Approved :: Apache Software License
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Classifier: Operating System :: OS Independent
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Classifier: Programming Language :: Python :: 3
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Requires-Python: >=3.8
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Requires-Dist: pydantic>=2.10.3
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Description-Content-Type: text/markdown
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# `hccinfhir` (HCC in FHIR)
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A Python library for extracting standardized service-level data from FHIR ExplanationOfBenefit resources, with a focus on supporting HCC (Hierarchical Condition Category) risk adjustment calculations.
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## Features
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- Extract diagnosis codes, procedures, providers, and other key data elements from FHIR EOBs
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- Support for both BCDA (Blue Button 2.0) and standard FHIR R4 formats
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- Pydantic models for type safety and data validation
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- Standardized Service Level Data (SLD) output format
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## Installation
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```bash
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pip install hccinfhir
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```
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## Why FHIR-Based HCC Processing?
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Risk Adjustment calculations traditionally rely on processed claims data, leading to information loss and reconciliation challenges. `hccinfhir` processes FHIR resources directly because:
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- FHIR represents the source of truth with complete clinical and administrative data
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- Risk Adjustment requires multiple data elements beyond diagnosis codes
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- Direct processing eliminates data transformation errors and simplifies reconciliation
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## Data Model & Flexibility
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While built for native FHIR processing, `hccinfhir` works with any data source that can be transformed into the SLD (Service Level Data) format:
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```python
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sld = [{
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"procedure_code": "99214",
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"diagnosis_codes": ["E11.9", "I10"],
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"claim_type": "71",
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"provider_specialty": "01",
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"service_date": "2024-01-15"
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}, ...]
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```
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For more details on the SLD format, see the `models.py` file.
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## Core Components
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### 1. Extractor Module
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Processes FHIR ExplanationOfBenefit resources to extract Minimum Data Elements (MDE):
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```python
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from hccinfhir.extractor import extract_sld, extract_sld_list
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sld = extract_sld(eob_data) # Process single EOB
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sld_list = extract_sld_list([eob1, eob2]) # Process multiple EOBs
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```
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### 2. Filter Module
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Implements claim filtering rules:
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- Inpatient/outpatient criteria - Type of Bill + Eligible CPT/HCPCS
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- Professional service requirements - Eligible CPT/HCPCS
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- Provider validation (Not in scope for this release, applicable to RAPS)
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```python
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from hccinfhir.filter import apply_filter
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filtered_sld = apply_filter(sld_list)
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```
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### 3. Logic Module (In Development)
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Implements core HCC calculation logic:
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- Maps diagnosis codes to HCC categories
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- Applies hierarchical rules and interactions
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- Calculates final RAF scores
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- Integrates with standard CMS data files
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## Usage
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```python
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from hccinfhir import HCCInFHIR
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hcc_processor = HCCInFHIR()
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sld_list = hcc_processor.extract_sld_list(eob_list)
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filtered_sld = hcc_processor.apply_filters(sld_list) # future
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raf_details = hcc_processor.calculate_raf(filtered_sld, demographic_data) # future
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```
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## Testing
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```bash
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$ python3 -m hatch shell
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$ python3 -m pip install -e .
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$ python3 -m pytest tests/*
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```
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## Dependencies
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- Pydantic >= 2.10.3
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- Standard Python libraries
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## Research: FHIR BCDA and 837 Field Mapping Analysis
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### Core Identifiers
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| Field | 837 Source | FHIR BCDA Source | Alignment Analysis |
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|-------|------------|------------------|-------------------|
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| claim_id | CLM01 segment | eob.id | ✓ Direct mapping |
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| patient_id | NM109 when NM101='IL' | eob.patient.reference (last part after '/') | ✓ Aligned but different formats |
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### Provider Information
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| Field | 837 Source | FHIR BCDA Source | Alignment Analysis |
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|-------|------------|-------------------|-------------------|
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| performing_provider_npi | NM109 when NM101='82' and NM108='XX' | careTeam member with role 'performing'/'rendering' | ✓ Aligned |
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| billing_provider_npi | NM109 when NM101='85' and NM108='XX' | contained resources with NPI system identifier | ✓ Conceptually aligned |
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| provider_specialty | PRV03 when PRV01='PE' | careTeam member qualification with specialty system | ✓ Aligned but different code systems |
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### Claim Type Information
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| Field | 837 Source | FHIR BCDA Source | Alignment Analysis |
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|-------|------------|-------------------|-------------------|
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| claim_type | GS08 (mapped via CLAIM_TYPES) | eob.type with claim_type system | ✓ Aligned but different coding |
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| facility_type | CLM05-1 (837I only) | facility.extension with facility_type system | ✓ Aligned for institutional claims |
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| service_type | CLM05-2 (837I only) | extension or eob.type with service_type system | ✓ Aligned for institutional claims |
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### Service Line Information
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| Field | 837 Source | FHIR BCDA Source | Alignment Analysis |
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|-------|------------|-------------------|-------------------|
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| procedure_code | SV1/SV2 segment, element 2 | item.productOrService with pr system | ✓ Aligned |
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| ndc | LIN segment after service line | item.productOrService with ndc system or extension | ✓ Aligned but different locations |
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| quantity | SV1/SV2 element 4 | item.quantity.value | ✓ Direct mapping |
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| quantity_unit | SV1/SV2 element 5 | item.quantity.unit | ✓ Direct mapping |
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| service_date | DTP segment with qualifier 472 | item.servicedPeriod or eob.billablePeriod | ✓ Aligned |
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| place_of_service | SV1 element 6 | item.locationCodeableConcept with place_of_service system | ✓ Aligned |
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| modifiers | SV1/SV2 segment, additional qualifiers | item.modifier with pr system | ✓ Aligned |
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### Diagnosis Information
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| Field | 837 Source | FHIR BCDA Source | Alignment Analysis |
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|-------|------------|-------------------|-------------------|
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| linked_diagnosis_codes | SV1/SV2 diagnosis pointers + HI segment codes | item.diagnosisSequence + diagnosis lookup | ✓ Aligned but different structure |
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| claim_diagnosis_codes | HI segment codes | diagnosis array with icd10cm/icd10 systems | ✓ Aligned |
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### Additional Fields
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| Field | 837 Source | FHIR BCDA Source | Alignment Analysis |
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|-------|------------|-------------------|-------------------|
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| allowed_amount | Not available in 837 | item.adjudication with 'eligible' category | ⚠️ Only in FHIR |
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### Key Differences and Notes
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1. **Structural Differences**:
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- 837 uses a segment-based approach with positional elements
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- FHIR uses a nested object structure with explicit systems and codes
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2. **Code Systems**:
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- FHIR explicitly defines systems for each code (via SYSTEMS constant)
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- 837 uses implicit coding based on segment position and qualifiers
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3. **Data Validation**:
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- FHIR implementation uses Pydantic models for validation
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- 837 implements manual validation and parsing
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4. **Diagnosis Handling**:
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- 837: Direct parsing from HI segment with position-based lookup
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- FHIR: Uses sequence numbers and separate diagnosis array
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5. **Provider Information**:
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- 837: Direct from NM1 segments with role qualifiers
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- FHIR: Through careTeam structure with role coding
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### TODO: Enhancement Suggestions
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1. Consider adding validation for code systems in 837 parser to match FHIR's explicitness
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2. Standardize date handling between both implementations
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3. Add support for allowed_amount in 837 if available in different segments
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4. Consider adding more robust error handling in both implementations
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## Contributing
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Join us at [mimilabs](https://mimilabs.ai/signup). Reference data available in MIMILabs data lakehouse.
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## License
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Apache License 2.0
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hccinfhir/__init__.py,sha256=OCyYCv4jTOlYHZbTw2DTks3e6_YT1N2JXAOuyR03KNE,43
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hccinfhir/extractor.py,sha256=IHKxHEsuU5JIPnScv8x9v_L28aG5F6edZZ0VeYpBF6Y,1770
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hccinfhir/extractor_837.py,sha256=84OeYB1nXl329osWagkkuX0q4MVATnHGk7VZa9p6zoI,7160
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hccinfhir/extractor_fhir.py,sha256=Yu6Ce-2iKvn0j21t_EJUeXjwjZYbTh5HgqChMz8KkjI,8445
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hccinfhir/filter.py,sha256=C05uFhqSVb0J7BpKPGt4hwQrCd0_HbGSmrxKHIZLg4w,2259
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hccinfhir/models.py,sha256=dH0qICn8yjsqc35INYSG4HbvYyegRCPtQOPTJf5Qozw,2033
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hccinfhir/data/__init__.py,sha256=SGiSkpGrnxbvtEFMMlk82NFHOE50hFXcgKwKUSuVZUg,45
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hccinfhir/data/ra_eligible_cpt_hcpcs_2023.csv,sha256=VVoA4s0hsFmcRIugyFdbvSoeLcn7M7z0DITT6l4YqL8,39885
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hccinfhir/data/sample_837_0.txt,sha256=eggrD259uHa05z2dfxWBpUDseSDp_AQcLyN_adpHyTw,5295
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hccinfhir/data/sample_837_1.txt,sha256=E155MdemSDYoXokuTXUZ6Br_RGGedYv5t5dh-eMRmuk,1322
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hccinfhir/data/sample_837_10.txt,sha256=zSJXI78vHAksA7FFQEVLvepefdpMM2_AexLyoDimV3Q,1129
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hccinfhir/data/sample_837_11.txt,sha256=suVxlZEllEOy6dYgbzGIphKW6hDAKdYQTZFM3Ob84q4,817
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hccinfhir/data/sample_837_2.txt,sha256=2bvXzaiopr7pO3D3pL7nLxcpgqKXrhu3lbulveJDJ-I,1125
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hccinfhir/data/sample_837_3.txt,sha256=_B1Ktpsg7bOnA5BwZ7AUB0o7MME5AmLGuxzHq42FWok,1113
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hccinfhir/data/sample_837_4.txt,sha256=jpzyiHKmRGMqN1ij9s1X4zRj0a2PXwtee4mjn4BRF3g,1077
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hccinfhir/data/sample_837_5.txt,sha256=eYG4URk3zAr5UsnBKO5Wezo8dnL_HXGCMmXWJu0nxPA,1300
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hccinfhir/data/sample_837_6.txt,sha256=pnKQf2cVcZpUl8PGeYzZxRxjKOMcISN2dBObIMtLx7E,1331
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hccinfhir/data/sample_837_7.txt,sha256=5Y-x7ZA9d_qGaIrpVGfXKQBXqbxKiQ5CWOwEW1XGlds,1253
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hccinfhir/data/sample_837_8.txt,sha256=J-zm0fzp6F19r2SWfHcCtab9ezd3c4YaSRO-RatJ-c4,1250
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hccinfhir/data/sample_837_9.txt,sha256=nIIurZ0tLHw6ZfDM__U-WqV8Q0u4K3WP56-r3BnAEv8,1341
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hccinfhir/data/sample_eob_1.json,sha256=_NGSVR2ysFpx-DcTvyga6dFCzhQ8Vi9fNzQEMPz5awU,3124
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hccinfhir/data/sample_eob_2.json,sha256=FcnJcx0ApOczxjJ_uxVLzCep9THfNf4xs9Yf7hxk8e4,1769
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hccinfhir/data/sample_eob_200.ndjson,sha256=CxpjeQ1DCMUzZILaM68UEhfxO0p45YGhDDoCZeq8PxU,1917986
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hccinfhir/data/sample_eob_3.json,sha256=4BW4wOMBEEU9RDfJR15rBEvk0KNHyuMEh3e055y87Hc,2306
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hccinfhir-0.0.3.dist-info/METADATA,sha256=Ekro5D_Wg4htDTmM1NDJOE03Z9BSggoQEdHKSsv1DY8,7654
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hccinfhir-0.0.3.dist-info/WHEEL,sha256=C2FUgwZgiLbznR-k0b_5k3Ai_1aASOXDss3lzCUsUug,87
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hccinfhir-0.0.3.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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hccinfhir-0.0.3.dist-info/RECORD,,
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Metadata-Version: 2.3
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Name: hccinfhir
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Version: 0.0.1
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Summary: HCC Algorithm for FHIR Resources
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Project-URL: Homepage, https://github.com/mimilabs/hccinfhir
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Project-URL: Issues, https://github.com/mimilabs/hccinfhir/issues
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Author-email: Yubin Park <yubin.park@mimilabs.ai>
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Classifier: License :: OSI Approved :: Apache Software License
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Classifier: Operating System :: OS Independent
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Classifier: Programming Language :: Python :: 3
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Requires-Python: >=3.8
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Requires-Dist: pydantic>=2.10.3
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Description-Content-Type: text/markdown
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# `hccinfhir` (HCC in FHIR)
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HCC (Hierarchical Condition Category) Algorithm Implementation for FHIR Resources
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## Overview
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`hccinfhir` implements the CMS-HCC Risk Adjustment model using FHIR (Fast Healthcare Interoperability Resources) data. It processes Blue Button 2.0 API (BCDA) data to calculate Hierarchical Condition Category (HCC) Risk Adjustment Factors (RAF).
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## Why FHIR-Based HCC Processing?
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Risk Adjustment calculations traditionally rely on processed claims data, leading to information loss and reconciliation challenges. `hccinfhir` processes FHIR resources directly because:
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23
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- FHIR represents the source of truth with complete clinical and administrative data
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24
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- Risk Adjustment requires multiple data elements beyond diagnosis codes
|
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25
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- Direct processing eliminates data transformation errors and simplifies reconciliation
|
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26
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-
|
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27
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## Data Flexibility
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|
28
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While built for native FHIR processing, `hccinfhir` works with any data source that can be transformed into the MDE format:
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29
|
-
|
|
30
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-
```python
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|
31
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-
mde = [{
|
|
32
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-
"procedure_code": "99214",
|
|
33
|
-
"diagnosis_codes": ["E11.9", "I10"],
|
|
34
|
-
"claim_type": "71",
|
|
35
|
-
"provider_specialty": "01",
|
|
36
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"service_date": "2024-01-15"
|
|
37
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-
}, ...]
|
|
38
|
-
```
|
|
39
|
-
|
|
40
|
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## Components
|
|
41
|
-
|
|
42
|
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### 1. Extractor Module
|
|
43
|
-
Processes FHIR ExplanationOfBenefit resources to extract Minimum Data Elements (MDE):
|
|
44
|
-
```python
|
|
45
|
-
from hccinfhir.extractor import extract_mde, extract_mde_list
|
|
46
|
-
|
|
47
|
-
mde = extract_mde(eob_data) # Process single EOB
|
|
48
|
-
|
|
49
|
-
mde_list = extract_mde_list([eob1, eob2]) # Process multiple EOBs
|
|
50
|
-
```
|
|
51
|
-
|
|
52
|
-
### 2. Logic Module (In Development)
|
|
53
|
-
Implements core HCC calculation logic:
|
|
54
|
-
- Maps diagnosis codes to HCC categories
|
|
55
|
-
- Applies hierarchical rules and interactions
|
|
56
|
-
- Calculates final RAF scores
|
|
57
|
-
- Integrates with standard CMS data files
|
|
58
|
-
|
|
59
|
-
### 3. Filter Module (In Development)
|
|
60
|
-
Implements claim filtering rules:
|
|
61
|
-
- Inpatient/outpatient criteria
|
|
62
|
-
- Professional service requirements
|
|
63
|
-
- Provider validation
|
|
64
|
-
- Date range filtering
|
|
65
|
-
|
|
66
|
-
## Installation
|
|
67
|
-
```bash
|
|
68
|
-
pip install hccinfhir
|
|
69
|
-
```
|
|
70
|
-
|
|
71
|
-
## Usage
|
|
72
|
-
```python
|
|
73
|
-
from hccinfhir import HCCInFHIR
|
|
74
|
-
|
|
75
|
-
hcc_processor = HCCInFHIR()
|
|
76
|
-
mde_list = hcc_processor.extract_mde_list(eob_list)
|
|
77
|
-
filtered_mde = hcc_processor.apply_filters(mde_list) # future
|
|
78
|
-
raf_details = hcc_processor.calculate_raf(filtered_mde, demographic_data) # future
|
|
79
|
-
```
|
|
80
|
-
|
|
81
|
-
## Dependencies
|
|
82
|
-
- Pydantic >= 2.10.3
|
|
83
|
-
- Standard Python libraries
|
|
84
|
-
|
|
85
|
-
## Contributing
|
|
86
|
-
Join us at [mimilabs](https://mimilabs.ai/signup). Reference data available in MIMILabs data lakehouse.
|
|
87
|
-
|
|
88
|
-
## License
|
|
89
|
-
Apache License 2.0
|
hccinfhir-0.0.1.dist-info/RECORD
DELETED
|
@@ -1,10 +0,0 @@
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|
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1
|
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hccinfhir/__init__.py,sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs,1
|
|
2
|
-
hccinfhir/extractor.py,sha256=XRoWxmXAvqqmXkNjmr-yWmkKhKuFcVO5W3RyV9oCEQc,4288
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|
3
|
-
hccinfhir/data/__init__.py,sha256=daEdpEyAJIa8b2VkCqSKcw8PaExcB6Qro80XNes_sHA,2
|
|
4
|
-
hccinfhir/data/sample_eob_1.json,sha256=_NGSVR2ysFpx-DcTvyga6dFCzhQ8Vi9fNzQEMPz5awU,3124
|
|
5
|
-
hccinfhir/data/sample_eob_2.json,sha256=FcnJcx0ApOczxjJ_uxVLzCep9THfNf4xs9Yf7hxk8e4,1769
|
|
6
|
-
hccinfhir/data/sample_eob_3.json,sha256=4BW4wOMBEEU9RDfJR15rBEvk0KNHyuMEh3e055y87Hc,2306
|
|
7
|
-
hccinfhir-0.0.1.dist-info/METADATA,sha256=nFVxOtMDW1xRb_Ff_58Pc3x6FQkucve7yCGLpG7TKgI,2998
|
|
8
|
-
hccinfhir-0.0.1.dist-info/WHEEL,sha256=C2FUgwZgiLbznR-k0b_5k3Ai_1aASOXDss3lzCUsUug,87
|
|
9
|
-
hccinfhir-0.0.1.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
|
|
10
|
-
hccinfhir-0.0.1.dist-info/RECORD,,
|
|
File without changes
|
|
File without changes
|