hanzo-mcp 0.5.0__py3-none-any.whl → 0.5.2__py3-none-any.whl

hanzo_mcp/tools/database/graph_stats.py

@@ -0,0 +1,345 @@
+"""Graph statistics tool for analyzing the graph database."""
+
+import json
+import sqlite3
+from typing import Annotated, Optional, TypedDict, Unpack, final, override
+from collections import Counter, defaultdict
+
+from fastmcp import Context as MCPContext
+from pydantic import Field
+
+from hanzo_mcp.tools.common.base import BaseTool
+from hanzo_mcp.tools.common.context import create_tool_context
+from hanzo_mcp.tools.common.permissions import PermissionManager
+from hanzo_mcp.tools.database.database_manager import DatabaseManager
+
+
+ProjectPath = Annotated[
+    Optional[str],
+    Field(
+        description="Project path (defaults to current directory)",
+        default=None,
+    ),
+]
+
+Detailed = Annotated[
+    bool,
+    Field(
+        description="Show detailed statistics",
+        default=False,
+    ),
+]
+
+NodeType = Annotated[
+    Optional[str],
+    Field(
+        description="Filter stats by node type",
+        default=None,
+    ),
+]
+
+Relationship = Annotated[
+    Optional[str],
+    Field(
+        description="Filter stats by relationship type",
+        default=None,
+    ),
+]
+
+
+class GraphStatsParams(TypedDict, total=False):
+    """Parameters for graph stats tool."""
+
+    project_path: Optional[str]
+    detailed: bool
+    node_type: Optional[str]
+    relationship: Optional[str]
+
+
+@final
+class GraphStatsTool(BaseTool):
+    """Tool for getting graph database statistics."""
+
+    def __init__(self, permission_manager: PermissionManager, db_manager: DatabaseManager):
+        """Initialize the graph stats tool.
+
+        Args:
+            permission_manager: Permission manager for access control
+            db_manager: Database manager instance
+        """
+        self.permission_manager = permission_manager
+        self.db_manager = db_manager
+
+    @property
+    @override
+    def name(self) -> str:
+        """Get the tool name."""
+        return "graph_stats"
+
+    @property
+    @override
+    def description(self) -> str:
+        """Get the tool description."""
+        return """Get statistics about the project's graph database.
+
+Shows:
+- Node and edge counts
+- Node type distribution
+- Relationship type distribution
+- Degree statistics (connections per node)
+- Connected components
+- Most connected nodes (hubs)
+- Orphaned nodes
+
+Examples:
+- graph_stats                      # Basic stats
+- graph_stats --detailed           # Detailed analysis
+- graph_stats --node-type "class"  # Stats for specific node type
+- graph_stats --relationship "calls"  # Stats for specific relationship
+"""
+
+    @override
+    async def call(
+        self,
+        ctx: MCPContext,
+        **params: Unpack[GraphStatsParams],
+    ) -> str:
+        """Get graph statistics.
+
+        Args:
+            ctx: MCP context
+            **params: Tool parameters
+
+        Returns:
+            Graph statistics
+        """
+        tool_ctx = create_tool_context(ctx)
+        await tool_ctx.set_tool_info(self.name)
+
+        # Extract parameters
+        project_path = params.get("project_path")
+        detailed = params.get("detailed", False)
+        node_type_filter = params.get("node_type")
+        relationship_filter = params.get("relationship")
+
+        # Get project database
+        try:
+            if project_path:
+                project_db = self.db_manager.get_project_db(project_path)
+            else:
+                import os
+                project_db = self.db_manager.get_project_for_path(os.getcwd())
+                
+            if not project_db:
+                return "Error: Could not find project database"
+
+        except PermissionError as e:
+            return str(e)
+        except Exception as e:
+            return f"Error accessing project database: {str(e)}"
+
+        await tool_ctx.info(f"Getting graph statistics for project: {project_db.project_path}")
+
+        # Get graph connection
+        graph_conn = project_db.get_graph_connection()
+
+        try:
+            cursor = graph_conn.cursor()
+            output = []
+            output.append(f"=== Graph Database Statistics ===")
+            output.append(f"Project: {project_db.project_path}")
+            output.append(f"Database: {project_db.graph_path}")
+            output.append("")
+            
+            # Basic counts
+            if node_type_filter:
+                cursor.execute("SELECT COUNT(*) FROM nodes WHERE type = ?", (node_type_filter,))
+                node_count = cursor.fetchone()[0]
+                output.append(f"Nodes (type='{node_type_filter}'): {node_count:,}")
+            else:
+                cursor.execute("SELECT COUNT(*) FROM nodes")
+                node_count = cursor.fetchone()[0]
+                output.append(f"Total Nodes: {node_count:,}")
+            
+            if relationship_filter:
+                cursor.execute("SELECT COUNT(*) FROM edges WHERE relationship = ?", (relationship_filter,))
+                edge_count = cursor.fetchone()[0]
+                output.append(f"Edges (relationship='{relationship_filter}'): {edge_count:,}")
+            else:
+                cursor.execute("SELECT COUNT(*) FROM edges")
+                edge_count = cursor.fetchone()[0]
+                output.append(f"Total Edges: {edge_count:,}")
+            
+            if node_count == 0:
+                output.append("\nGraph is empty.")
+                return "\n".join(output)
+            
+            output.append("")
+            
+            # Node type distribution
+            output.append("=== Node Types ===")
+            cursor.execute("SELECT type, COUNT(*) as count FROM nodes GROUP BY type ORDER BY count DESC")
+            node_types = cursor.fetchall()
+            
+            for n_type, count in node_types[:10]:
+                pct = (count / node_count) * 100
+                output.append(f"{n_type}: {count:,} ({pct:.1f}%)")
+            
+            if len(node_types) > 10:
+                output.append(f"... and {len(node_types) - 10} more types")
+            
+            output.append("")
+            
+            # Relationship distribution
+            output.append("=== Relationship Types ===")
+            cursor.execute("SELECT relationship, COUNT(*) as count FROM edges GROUP BY relationship ORDER BY count DESC")
+            rel_types = cursor.fetchall()
+            
+            if rel_types:
+                for rel, count in rel_types[:10]:
+                    pct = (count / edge_count) * 100 if edge_count > 0 else 0
+                    output.append(f"{rel}: {count:,} ({pct:.1f}%)")
+                
+                if len(rel_types) > 10:
+                    output.append(f"... and {len(rel_types) - 10} more types")
+            else:
+                output.append("No edges in graph")
+            
+            output.append("")
+            
+            # Degree statistics
+            output.append("=== Connectivity ===")
+            
+            # Calculate degrees
+            degrees = defaultdict(int)
+            
+            # Out-degree
+            query = "SELECT source, COUNT(*) FROM edges"
+            if relationship_filter:
+                query += " WHERE relationship = ?"
+                cursor.execute(query + " GROUP BY source", (relationship_filter,))
+            else:
+                cursor.execute(query + " GROUP BY source")
+            
+            for node, out_degree in cursor.fetchall():
+                degrees[node] += out_degree
+            
+            # In-degree
+            query = "SELECT target, COUNT(*) FROM edges"
+            if relationship_filter:
+                query += " WHERE relationship = ?"
+                cursor.execute(query + " GROUP BY target", (relationship_filter,))
+            else:
+                cursor.execute(query + " GROUP BY target")
+            
+            for node, in_degree in cursor.fetchall():
+                degrees[node] += in_degree
+            
+            if degrees:
+                degree_values = list(degrees.values())
+                avg_degree = sum(degree_values) / len(degree_values)
+                max_degree = max(degree_values)
+                min_degree = min(degree_values)
+                
+                output.append(f"Average degree: {avg_degree:.2f}")
+                output.append(f"Max degree: {max_degree}")
+                output.append(f"Min degree: {min_degree}")
+                
+                # Most connected nodes
+                output.append("\nMost connected nodes:")
+                sorted_nodes = sorted(degrees.items(), key=lambda x: x[1], reverse=True)
+                
+                for node, degree in sorted_nodes[:5]:
+                    cursor.execute("SELECT type FROM nodes WHERE id = ?", (node,))
+                    node_type = cursor.fetchone()
+                    type_str = f" ({node_type[0]})" if node_type else ""
+                    output.append(f"  {node}{type_str}: {degree} connections")
+            
+            # Orphaned nodes
+            cursor.execute("""
+                SELECT COUNT(*) FROM nodes n
+                WHERE NOT EXISTS (SELECT 1 FROM edges WHERE source = n.id OR target = n.id)
+            """)
+            orphan_count = cursor.fetchone()[0]
+            if orphan_count > 0:
+                orphan_pct = (orphan_count / node_count) * 100
+                output.append(f"\nOrphaned nodes: {orphan_count} ({orphan_pct:.1f}%)")
+            
+            if detailed:
+                output.append("\n=== Detailed Analysis ===")
+                
+                # Node properties usage
+                cursor.execute("SELECT COUNT(*) FROM nodes WHERE properties IS NOT NULL")
+                nodes_with_props = cursor.fetchone()[0]
+                if nodes_with_props > 0:
+                    props_pct = (nodes_with_props / node_count) * 100
+                    output.append(f"Nodes with properties: {nodes_with_props} ({props_pct:.1f}%)")
+                
+                # Edge properties usage
+                cursor.execute("SELECT COUNT(*) FROM edges WHERE properties IS NOT NULL")
+                edges_with_props = cursor.fetchone()[0]
+                if edges_with_props > 0 and edge_count > 0:
+                    props_pct = (edges_with_props / edge_count) * 100
+                    output.append(f"Edges with properties: {edges_with_props} ({props_pct:.1f}%)")
+                
+                # Weight distribution
+                cursor.execute("SELECT MIN(weight), MAX(weight), AVG(weight) FROM edges")
+                weight_stats = cursor.fetchone()
+                if weight_stats[0] is not None:
+                    output.append(f"\nEdge weights:")
+                    output.append(f"  Min: {weight_stats[0]}")
+                    output.append(f"  Max: {weight_stats[1]}")
+                    output.append(f"  Avg: {weight_stats[2]:.2f}")
+                
+                # Most common patterns
+                if not relationship_filter:
+                    output.append("\n=== Common Patterns ===")
+                    
+                    # Most common node type connections
+                    cursor.execute("""
+                        SELECT n1.type, e.relationship, n2.type, COUNT(*) as count
+                        FROM edges e
+                        JOIN nodes n1 ON e.source = n1.id
+                        JOIN nodes n2 ON e.target = n2.id
+                        GROUP BY n1.type, e.relationship, n2.type
+                        ORDER BY count DESC
+                        LIMIT 10
+                    """)
+                    
+                    patterns = cursor.fetchall()
+                    if patterns:
+                        output.append("Most common connections:")
+                        for src_type, rel, tgt_type, count in patterns:
+                            output.append(f"  {src_type} --[{rel}]--> {tgt_type}: {count} times")
+                
+                # Component analysis (simplified)
+                output.append("\n=== Graph Structure ===")
+                
+                # Check if graph is fully connected (simplified)
+                cursor.execute("""
+                    SELECT COUNT(DISTINCT node_id) FROM (
+                        SELECT source as node_id FROM edges
+                        UNION
+                        SELECT target as node_id FROM edges
+                    )
+                """)
+                connected_nodes = cursor.fetchone()[0]
+                
+                if connected_nodes < node_count:
+                    output.append(f"Connected nodes: {connected_nodes} / {node_count}")
+                    output.append("Graph has disconnected components")
+                else:
+                    output.append("All nodes are connected")
+            
+            return "\n".join(output)
+
+        except sqlite3.Error as e:
+            await tool_ctx.error(f"SQL error: {str(e)}")
+            return f"SQL error: {str(e)}"
+        except Exception as e:
+            await tool_ctx.error(f"Unexpected error: {str(e)}")
+            return f"Error getting statistics: {str(e)}"
+
+    def register(self, mcp_server) -> None:
+        """Register this tool with the MCP server."""
+        pass

hanzo_mcp/tools/database/sql_query.py

@@ -0,0 +1,229 @@
+"""SQL query tool for direct database queries."""
+
+import sqlite3
+from typing import Annotated, Optional, TypedDict, Unpack, final, override
+
+from fastmcp import Context as MCPContext
+from pydantic import Field
+
+from hanzo_mcp.tools.common.base import BaseTool
+from hanzo_mcp.tools.common.context import create_tool_context
+from hanzo_mcp.tools.common.permissions import PermissionManager
+from hanzo_mcp.tools.database.database_manager import DatabaseManager
+
+
+Query = Annotated[
+    str,
+    Field(
+        description="SQL query to execute",
+        min_length=1,
+    ),
+]
+
+ProjectPath = Annotated[
+    Optional[str],
+    Field(
+        description="Project path (defaults to current directory)",
+        default=None,
+    ),
+]
+
+ReadOnly = Annotated[
+    bool,
+    Field(
+        description="Execute in read-only mode (no INSERT/UPDATE/DELETE)",
+        default=True,
+    ),
+]
+
+
+class SqlQueryParams(TypedDict, total=False):
+    """Parameters for SQL query tool."""
+
+    query: str
+    project_path: Optional[str]
+    read_only: bool
+
+
+@final
+class SqlQueryTool(BaseTool):
+    """Tool for executing SQL queries on project databases."""
+
+    def __init__(self, permission_manager: PermissionManager, db_manager: DatabaseManager):
+        """Initialize the SQL query tool.
+
+        Args:
+            permission_manager: Permission manager for access control
+            db_manager: Database manager instance
+        """
+        self.permission_manager = permission_manager
+        self.db_manager = db_manager
+
+    @property
+    @override
+    def name(self) -> str:
+        """Get the tool name."""
+        return "sql_query"
+
+    @property
+    @override
+    def description(self) -> str:
+        """Get the tool description."""
+        return """Execute SQL queries on the project's embedded SQLite database.
+
+Each project has its own SQLite database with tables:
+- metadata: Key-value store for project metadata
+- files: File information and content
+- symbols: Code symbols (functions, classes, etc.)
+
+Features:
+- Direct SQL query execution
+- Read-only mode by default (safety)
+- Returns results in tabular format
+- Automatic project detection
+
+Examples:
+- sql_query --query "SELECT * FROM files LIMIT 10"
+- sql_query --query "SELECT name, type FROM symbols WHERE type='function'"
+- sql_query --query "INSERT INTO metadata (key, value) VALUES ('version', '1.0')" --read-only false
+
+Note: Use sql_search for text search operations."""
+
+    @override
+    async def call(
+        self,
+        ctx: MCPContext,
+        **params: Unpack[SqlQueryParams],
+    ) -> str:
+        """Execute SQL query.
+
+        Args:
+            ctx: MCP context
+            **params: Tool parameters
+
+        Returns:
+            Query results
+        """
+        tool_ctx = create_tool_context(ctx)
+        await tool_ctx.set_tool_info(self.name)
+
+        # Extract parameters
+        query = params.get("query")
+        if not query:
+            return "Error: query is required"
+
+        project_path = params.get("project_path")
+        read_only = params.get("read_only", True)
+
+        # Get project database
+        try:
+            if project_path:
+                project_db = self.db_manager.get_project_db(project_path)
+            else:
+                import os
+                project_db = self.db_manager.get_project_for_path(os.getcwd())
+                
+            if not project_db:
+                return "Error: Could not find project database"
+
+        except PermissionError as e:
+            return str(e)
+        except Exception as e:
+            return f"Error accessing project database: {str(e)}"
+
+        # Check if query is read-only
+        if read_only:
+            # Simple check for write operations
+            write_keywords = ['INSERT', 'UPDATE', 'DELETE', 'DROP', 'CREATE', 'ALTER']
+            query_upper = query.upper()
+            for keyword in write_keywords:
+                if keyword in query_upper:
+                    return f"Error: Query contains {keyword} operation. Set --read-only false to allow write operations."
+
+        await tool_ctx.info(f"Executing SQL query on project: {project_db.project_path}")
+
+        # Execute query
+        conn = None
+        try:
+            conn = project_db.get_sqlite_connection()
+            cursor = conn.cursor()
+            
+            # Execute the query
+            cursor.execute(query)
+            
+            # Handle different query types
+            if query.strip().upper().startswith('SELECT'):
+                # Fetch results
+                results = cursor.fetchall()
+                
+                if not results:
+                    return "No results found."
+                
+                # Get column names
+                columns = [desc[0] for desc in cursor.description]
+                
+                # Format as table
+                output = self._format_results_table(columns, results)
+                
+                return f"Query executed successfully. Found {len(results)} row(s).\n\n{output}"
+                
+            else:
+                # For non-SELECT queries, commit and return affected rows
+                conn.commit()
+                affected = cursor.rowcount
+                return f"Query executed successfully. Affected {affected} row(s)."
+
+        except sqlite3.Error as e:
+            await tool_ctx.error(f"SQL error: {str(e)}")
+            return f"SQL error: {str(e)}"
+        except Exception as e:
+            await tool_ctx.error(f"Unexpected error: {str(e)}")
+            return f"Error executing query: {str(e)}"
+        finally:
+            if conn:
+                conn.close()
+
+    def _format_results_table(self, columns: list[str], rows: list[tuple]) -> str:
+        """Format query results as a table."""
+        if not rows:
+            return "No results"
+        
+        # Calculate column widths
+        col_widths = []
+        for i, col in enumerate(columns):
+            max_width = len(col)
+            for row in rows[:100]:  # Check first 100 rows
+                val_str = str(row[i]) if row[i] is not None else "NULL"
+                max_width = max(max_width, len(val_str))
+            col_widths.append(min(max_width, 50))  # Cap at 50 chars
+        
+        # Build header
+        header = " | ".join(col.ljust(width) for col, width in zip(columns, col_widths))
+        separator = "-+-".join("-" * width for width in col_widths)
+        
+        # Build rows
+        output_rows = []
+        for row in rows[:1000]:  # Limit to 1000 rows
+            row_str = " | ".join(
+                self._truncate(str(val) if val is not None else "NULL", width).ljust(width)
+                for val, width in zip(row, col_widths)
+            )
+            output_rows.append(row_str)
+        
+        # Combine
+        output = [header, separator] + output_rows
+        
+        if len(rows) > 1000:
+            output.append(f"\n... and {len(rows) - 1000} more rows")
+        
+        return "\n".join(output)
+
+    def _truncate(self, text: str, max_width: int) -> str:
+        """Truncate text to max width."""
+        if len(text) <= max_width:
+            return text
+        return text[:max_width-3] + "..."
+
+    def register(self, mcp_server) -> None:
+        """Register this tool with the MCP server."""
+        pass