guts-base 0.8.5__py3-none-any.whl → 1.0.0__py3-none-any.whl
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- guts_base/__init__.py +2 -1
- guts_base/data/__init__.py +1 -1
- guts_base/data/generator.py +6 -5
- guts_base/data/survival.py +6 -0
- guts_base/mod.py +27 -80
- guts_base/prob.py +23 -275
- guts_base/sim/__init__.py +10 -1
- guts_base/sim/base.py +350 -78
- guts_base/sim/constructors.py +31 -0
- guts_base/sim/ecx.py +221 -63
- guts_base/sim/mempy.py +85 -70
- guts_base/sim/report.py +9 -9
- guts_base/sim/utils.py +10 -0
- {guts_base-0.8.5.dist-info → guts_base-1.0.0.dist-info}/METADATA +3 -4
- guts_base-1.0.0.dist-info/RECORD +25 -0
- guts_base/sim.py +0 -0
- guts_base-0.8.5.dist-info/RECORD +0 -24
- {guts_base-0.8.5.dist-info → guts_base-1.0.0.dist-info}/WHEEL +0 -0
- {guts_base-0.8.5.dist-info → guts_base-1.0.0.dist-info}/entry_points.txt +0 -0
- {guts_base-0.8.5.dist-info → guts_base-1.0.0.dist-info}/licenses/LICENSE +0 -0
- {guts_base-0.8.5.dist-info → guts_base-1.0.0.dist-info}/top_level.txt +0 -0
guts_base/sim/utils.py
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Metadata-Version: 2.4
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Name: guts_base
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Version: 0.
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Version: 1.0.0
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Summary: Basic GUTS model implementation in pymob
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Author-email: Florian Schunck <fluncki@protonmail.com>
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License: GNU GENERAL PUBLIC LICENSE
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Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
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Classifier: Operating System :: OS Independent
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Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
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Requires-Python:
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Requires-Python: <3.12,>=3.10
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Description-Content-Type: text/markdown
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License-File: LICENSE
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Requires-Dist: openpyxl>=3.1.3
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Requires-Dist: Bottleneck>=1.5.0
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Requires-Dist: expydb>=0.6.0
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Requires-Dist: pymob[numpyro]<1.0.0,>=0.4.1
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Requires-Dist: pymob[interactive,numpyro]<0.6.0,>=0.5.10
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Provides-Extra: dev
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Requires-Dist: pytest>=7.3; extra == "dev"
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Requires-Dist: bumpver; extra == "dev"
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guts_base/__init__.py,sha256=ulUbdy3eks46Fl2VAVRRymWiAmzDOj_pqRCBpItSnMI,227
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guts_base/mod.py,sha256=AzOCg1A8FP5EtVfp-66HT7G7h_wnHkenieaxTc9qCyk,5796
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guts_base/plot.py,sha256=rjIzyPUikOtubjWI5mX_ZY8ARWl2NiHDmwAZAdoaPS8,5693
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guts_base/prob.py,sha256=ITwo5dAGMHr5xTldilHMbKU6AFsWo4_ZwbfaXh97Gew,5443
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guts_base/data/__init__.py,sha256=JBgft1DTledwvB5hRZnyGiKWv-RXo1OIpb5kJXloOmo,826
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guts_base/data/expydb.py,sha256=Kcc6CeZMl3oEelk5UBN9VEfwgNF3CzTh13ooVkufAjE,8218
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guts_base/data/generator.py,sha256=rGOZU3B0Ho8V6KtfjcAmely8lnlqNFV8cRyGboayTRc,2910
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guts_base/data/openguts.py,sha256=WvhYl_AOdvNgzrcVS2f_PYbXNH_wSAz2uIBSR6BMSh0,11078
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guts_base/data/preprocessing.py,sha256=qggYkx2x62ingU1BNhJFyL1eQdFQsDJR2lefVfVWW2U,1732
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guts_base/data/survival.py,sha256=U-Ehloo8vnD81VeIglXLEUHX9lt7SjtEs2YEB0D9FHE,5096
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guts_base/data/time_of_death.py,sha256=hwngUwfRP3u8WmD3dHyXrphuu5d8ZJTKyBovGRwAHNQ,21014
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guts_base/data/utils.py,sha256=u3gGDJK15MfRUP4iIxsS-I1oqxD2qH_ugsT7o_Eac18,236
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guts_base/sim/__init__.py,sha256=5VgzsOXjMsylfWy4neeovZBG1w6G6p_tFaIfhnIeLPM,415
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guts_base/sim/base.py,sha256=7u7gj6HQSCtFUXrrX-ngfWsWnFEMk5NrDVJH0CIolAs,28960
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guts_base/sim/constructors.py,sha256=Kz9FHIH3EHsSIKd9sQgHa3eveniFifFlk1Hf-QR69Pg,875
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guts_base/sim/ecx.py,sha256=F2ImQbtJjP57udebY2c_vtOf4gB3yKSje0P8s9VIbtQ,18858
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guts_base/sim/mempy.py,sha256=IHd87UrmdXpC7y7q0IjYQJH075frjbp2a-dMVBeqZ0U,10164
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guts_base/sim/report.py,sha256=swTAp1qNTjDwWh-YOq_TLqtSxjQvjdwaNVHpEW8kXK4,1959
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guts_base/sim/utils.py,sha256=Qj_FPH6kywVxOwgCerS7w5CyuYR9HKmvBWFpmxwDFgk,256
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guts_base-1.0.0.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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guts_base-1.0.0.dist-info/METADATA,sha256=g8sJM482NTXEGv7dJKbLVujO_sRzkpg3fuHadmDMdhc,45406
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guts_base-1.0.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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guts_base-1.0.0.dist-info/entry_points.txt,sha256=icsHzG2jQ90ZS7XvLsI5Qj0-qGuPv2T0RBVN5daGCPU,183
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guts_base-1.0.0.dist-info/top_level.txt,sha256=PxhBgUd4r39W_VI4FyJjARwKbV5_glgCVnd6v_zAGdE,10
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guts_base-1.0.0.dist-info/RECORD,,
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guts_base/sim.py
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guts_base-0.8.5.dist-info/RECORD
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guts_base/__init__.py,sha256=ppPpX1eCoTM71Hz26tprUYZD-HlgQoc6uzIruorgAlE,208
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guts_base/mod.py,sha256=gGXV8j4Xm4HprN3wCUuWitIlwxU4SO3TuenE0bk8czE,7247
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guts_base/plot.py,sha256=rjIzyPUikOtubjWI5mX_ZY8ARWl2NiHDmwAZAdoaPS8,5693
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guts_base/prob.py,sha256=k1b-gc8yZNg8DMnxJHJzCy8Pud8_qEygGkrnmS2AcMY,14004
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guts_base/sim.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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guts_base/data/__init__.py,sha256=U5sJJgPwEVHVGTLeZNwl8VKLIgn1twpDNkOCMRSV1Nk,808
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guts_base/data/expydb.py,sha256=Kcc6CeZMl3oEelk5UBN9VEfwgNF3CzTh13ooVkufAjE,8218
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guts_base/data/generator.py,sha256=RBlPYIdFBGzTmcbTPWRqD2UrgejuZ4PmAdLq4ajc0LM,2887
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guts_base/data/openguts.py,sha256=WvhYl_AOdvNgzrcVS2f_PYbXNH_wSAz2uIBSR6BMSh0,11078
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guts_base/data/preprocessing.py,sha256=qggYkx2x62ingU1BNhJFyL1eQdFQsDJR2lefVfVWW2U,1732
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guts_base/data/survival.py,sha256=yNNZ7MabzrMeqPHOa8-LPxCgsIN4_X0aj_ANmeC9Wd8,4878
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guts_base/data/time_of_death.py,sha256=hwngUwfRP3u8WmD3dHyXrphuu5d8ZJTKyBovGRwAHNQ,21014
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guts_base/sim/__init__.py,sha256=vgZu2oi4RHIQuLS19570xBdLQasL75puxabGrbLuIGA,276
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guts_base/sim/base.py,sha256=dgMJdgNNXM-89fKN6hvSu1UCtdR-6cxVoa4F0MHknV4,18037
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guts_base/sim/ecx.py,sha256=j4PCCvStUFtX4MJGpsYgc3G9vgAoKRTeDzs7LwzFBwg,12560
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guts_base/sim/mempy.py,sha256=xsA3Q7jQrdcmQZJzKBdQnr8yZk-f36YgbLlV-VvJpxg,9514
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guts_base/sim/report.py,sha256=EextbyUn3nsgTm16P_rWPOqCtknu9a99VuAk3vvstf4,1992
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guts_base-0.8.5.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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guts_base-0.8.5.dist-info/METADATA,sha256=KQmNrVoovVfjENXuD5hR0XwM3M0lYvnwZN2rzseTu0Q,45419
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guts_base-0.8.5.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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guts_base-0.8.5.dist-info/entry_points.txt,sha256=icsHzG2jQ90ZS7XvLsI5Qj0-qGuPv2T0RBVN5daGCPU,183
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guts_base-0.8.5.dist-info/top_level.txt,sha256=PxhBgUd4r39W_VI4FyJjARwKbV5_glgCVnd6v_zAGdE,10
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guts_base-0.8.5.dist-info/RECORD,,
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