geoseeq 0.7.1__py3-none-any.whl → 0.7.2__py3-none-any.whl

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Files changed (7) hide show
  1. geoseeq/cli/main.py +1 -1
  2. geoseeq/cli/upload/upload.py +2 -2
  3. {geoseeq-0.7.1.dist-info → geoseeq-0.7.2.dist-info}/METADATA +6 -1
  4. {geoseeq-0.7.1.dist-info → geoseeq-0.7.2.dist-info}/RECORD +7 -7
  5. {geoseeq-0.7.1.dist-info → geoseeq-0.7.2.dist-info}/WHEEL +0 -0
  6. {geoseeq-0.7.1.dist-info → geoseeq-0.7.2.dist-info}/entry_points.txt +0 -0
  7. {geoseeq-0.7.1.dist-info → geoseeq-0.7.2.dist-info}/licenses/LICENSE +0 -0
geoseeq/cli/main.py CHANGED
@@ -55,7 +55,7 @@ def version():
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  Use of this tool implies acceptance of the GeoSeeq End User License Agreement.
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  Run `geoseeq eula show` to view the EULA.
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  """
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- click.echo('0.7.1') # remember to update pyproject.toml
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+ click.echo('0.7.2') # remember to update pyproject.toml
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  @main.group('advanced')
geoseeq/cli/upload/upload.py CHANGED
@@ -128,9 +128,9 @@ def cli_upload_file(state, cores, threads_per_upload, num_retries, chunk_size_mb
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  )
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  for geoseeq_file_name, file_path in name_pairs:
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  if isfile(file_path):
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- upload_manager.add_local_file_to_result_folder(result_folder, file_path)
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+ upload_manager.add_local_file_to_result_folder(result_folder, file_path, geoseeq_file_name=geoseeq_file_name)
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  elif isdir(file_path) and recursive:
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- upload_manager.add_local_folder_to_result_folder(result_folder, file_path, recursive=recursive, hidden_files=hidden, prefix=file_path)
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+ upload_manager.add_local_folder_to_result_folder(result_folder, file_path, recursive=recursive, hidden_files=hidden, prefix=file_path, geoseeq_file_name=geoseeq_file_name)
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  elif isdir(file_path) and not recursive:
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  raise click.UsageError('Cannot upload a folder without --recursive')
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  click.echo(upload_manager.get_preview_string(), err=True)
{geoseeq-0.7.1.dist-info → geoseeq-0.7.2.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: geoseeq
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- Version: 0.7.1
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+ Version: 0.7.2
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  Summary: GeoSeeq command line tools and python API
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  Project-URL: Homepage, https://github.com/biotia/geoseeq_api_client
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  Project-URL: Issues, https://github.com/biotia/geoseeq_api_client/issues
@@ -15,6 +15,11 @@ Requires-Dist: click
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  Requires-Dist: pandas
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  Requires-Dist: requests
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  Requires-Dist: tqdm
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+ Provides-Extra: test
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+ Requires-Dist: pytest-cov>=4.0; extra == 'test'
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+ Requires-Dist: pytest-mock>=3.10; extra == 'test'
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+ Requires-Dist: pytest>=7.0; extra == 'test'
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+ Requires-Dist: requests-mock>=1.11; extra == 'test'
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  Description-Content-Type: text/markdown
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  # Geoseeq API Client
{geoseeq-0.7.1.dist-info → geoseeq-0.7.2.dist-info}/RECORD RENAMED
@@ -25,7 +25,7 @@ geoseeq/cli/download.py,sha256=Znjuc9IFOcIa5_Od9mFXHJdYAJtgw9Bc_wPPcOVXn7s,21298
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  geoseeq/cli/fastq_utils.py,sha256=-bmeQLaiMBm57zWOF0R5OlWTU0_3sh1JBC1RYw2BOFM,3083
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  geoseeq/cli/find_grn.py,sha256=oMDxkzGQBQb2_cCuvmwoeHOsFHqyO9RLeJzrB6bAe5M,439
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  geoseeq/cli/get_eula.py,sha256=79mbUwyiF7O1r0g6UTxG9kJGQEqKuH805E6eLkPC6Y4,997
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- geoseeq/cli/main.py,sha256=jN3ar-CL5glFnlJhelXliESoP_W2QMrVKkHPQtvhU54,3982
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+ geoseeq/cli/main.py,sha256=uGCf-uREHdrDzQZDiBLFt6KcKcyDRHnN6vHZRSwZaYU,3982
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  geoseeq/cli/manage.py,sha256=wGXAcVaXqE5JQEU8Jh6OlHr02nB396bpS_SFcOZdrEo,5929
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  geoseeq/cli/progress_bar.py,sha256=p1Xl01nkYxSBZCB30ue2verIIi22W93m3ZAMAxipD0g,738
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  geoseeq/cli/project.py,sha256=V5SdXm2Hwo2lxrkpwRDedw-mAE4XnM2uwT-Gj1D90VQ,3030
@@ -42,7 +42,7 @@ geoseeq/cli/shared_params/id_handlers.py,sha256=KtzflnplYVkXsyqI5Ej6r-_BwQnuXVHP
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  geoseeq/cli/shared_params/obj_getters.py,sha256=ZSkt6LnDkVFlNVYKgLrjzg60-6BthZMr3eeD3HNqzac,2741
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  geoseeq/cli/shared_params/opts_and_args.py,sha256=_DcJ-TqgrbBaeDd-kuHEx2gLZPQN6EHZYWh8Ag-d8Vg,2091
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  geoseeq/cli/upload/__init__.py,sha256=tRrljqG7uBM6zVBKpDw1zevHz6Vy418HuIYZKwByyWg,862
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- geoseeq/cli/upload/upload.py,sha256=U9w18sG6dZ0uJoAMcQDLdrEtgmRaSaPS7-8KM5LkVd4,14220
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+ geoseeq/cli/upload/upload.py,sha256=tBga8TW_5qXM4avXH5BAfLrYNms_5eqdyJZex47hZ90,14294
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  geoseeq/cli/upload/upload_advanced.py,sha256=1pjtbe8EidIo4eR1_oVD00rPCTxYj8CRqB8D9buA62M,12432
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  geoseeq/cli/upload/upload_reads.py,sha256=dZK_Mh3a3NdC4zVB4Yyfz-NViCK9_rROQbmLWTrh8Pc,11642
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  geoseeq/contrib/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -92,8 +92,8 @@ geoseeq/vc/vc_cache.py,sha256=P4LXTbq2zOIv1OhP7Iw5MmypR2vXuy29Pq5K6gRvi-M,730
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  geoseeq/vc/vc_dir.py,sha256=A9CLTh2wWCRzZjiLyqXD1vhtsWZGD3OjaMT5KqlfAXI,457
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  geoseeq/vc/vc_sample.py,sha256=qZeioWydXvfu4rGMs20nICfNcp46y_XkND-bHdV6P5M,3850
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  geoseeq/vc/vc_stub.py,sha256=IQr8dI0zsWKVAeY_5ybDD6n49_3othcgfHS3P0O9tuY,3110
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- geoseeq-0.7.1.dist-info/METADATA,sha256=7muy1ekQlBoXXfeEAz6NeuvXHgNttqHKJkCVSIqxdIU,4892
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- geoseeq-0.7.1.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
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- geoseeq-0.7.1.dist-info/entry_points.txt,sha256=yF-6KDM8zXib4Al0qn49TX-qM7PUkWUIcYtsgt36rjM,45
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- geoseeq-0.7.1.dist-info/licenses/LICENSE,sha256=IuhIl1XCxXLPLJT_coN1CNqQU4Khlq7x4IdW7ioOJD8,1067
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- geoseeq-0.7.1.dist-info/RECORD,,
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+ geoseeq-0.7.2.dist-info/METADATA,sha256=nBGfEYFfG9yWP6LWxczthpgwC5vZ5f7xi7VyaxVmz4Y,5107
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+ geoseeq-0.7.2.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
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+ geoseeq-0.7.2.dist-info/entry_points.txt,sha256=yF-6KDM8zXib4Al0qn49TX-qM7PUkWUIcYtsgt36rjM,45
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+ geoseeq-0.7.2.dist-info/licenses/LICENSE,sha256=IuhIl1XCxXLPLJT_coN1CNqQU4Khlq7x4IdW7ioOJD8,1067
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+ geoseeq-0.7.2.dist-info/RECORD,,