geoseeq 0.6.12.dev2__py3-none-any.whl → 0.6.13.dev0__py3-none-any.whl

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Files changed (8) hide show
  1. geoseeq/cli/main.py +1 -1
  2. geoseeq/upload_download_manager.py +6 -7
  3. {geoseeq-0.6.12.dev2.dist-info → geoseeq-0.6.13.dev0.dist-info}/METADATA +1 -1
  4. {geoseeq-0.6.12.dev2.dist-info → geoseeq-0.6.13.dev0.dist-info}/RECORD +8 -8
  5. {geoseeq-0.6.12.dev2.dist-info → geoseeq-0.6.13.dev0.dist-info}/LICENSE +0 -0
  6. {geoseeq-0.6.12.dev2.dist-info → geoseeq-0.6.13.dev0.dist-info}/WHEEL +0 -0
  7. {geoseeq-0.6.12.dev2.dist-info → geoseeq-0.6.13.dev0.dist-info}/entry_points.txt +0 -0
  8. {geoseeq-0.6.12.dev2.dist-info → geoseeq-0.6.13.dev0.dist-info}/top_level.txt +0 -0
geoseeq/cli/main.py CHANGED
@@ -54,7 +54,7 @@ def version():
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  Use of this tool implies acceptance of the GeoSeeq End User License Agreement.
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  Run `geoseeq eula show` to view the EULA.
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  """
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- click.echo('0.6.12dev2') # remember to update pyproject.toml
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+ click.echo('0.6.13dev0') # remember to update pyproject.toml
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  @main.group('advanced')
geoseeq/upload_download_manager.py CHANGED
@@ -127,17 +127,16 @@ class GeoSeeqUploadManager:
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  def _download_one_file(args):
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- original_url, file_path, key, callback, pbar, ignore_errors, head, log_level, parallel_downloads = args
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+ url, file_path, key, callback, pbar, ignore_errors, head, log_level, parallel_downloads = args
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  if parallel_downloads:
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  _make_in_process_logger(log_level)
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- if isinstance(original_url, ResultFile):
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- url = original_url.get_download_url()
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+ if dirname(file_path):
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+ makedirs(dirname(file_path), exist_ok=True)
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+ if isinstance(url, ResultFile):
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+ local_path = url.download(filename=file_path, progress_tracker=pbar, head=head)
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  else:
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- url = original_url
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- try:
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- if dirname(file_path):
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- makedirs(dirname(file_path), exist_ok=True)
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  local_path = download_url(url, filename=file_path, progress_tracker=pbar, head=head)
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+ try:
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  if callback is not None:
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  callback_result = callback(local_path)
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  else:
{geoseeq-0.6.12.dev2.dist-info → geoseeq-0.6.13.dev0.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: geoseeq
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- Version: 0.6.12.dev2
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+ Version: 0.6.13.dev0
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  Summary: GeoSeeq command line tools and python API
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  Author: David C. Danko
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  Author-email: "David C. Danko" <dcdanko@biotia.io>
{geoseeq-0.6.12.dev2.dist-info → geoseeq-0.6.13.dev0.dist-info}/RECORD RENAMED
@@ -11,7 +11,7 @@ geoseeq/project.py,sha256=kN6m1N4Tlud7saU03Sbir-oIBnXet_Cwi2OVVdaeag0,13929
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  geoseeq/remote_object.py,sha256=GYN6PKU7Zz3htIdpFjfZiFejzGqqJHbJyKlefM1Eixk,7151
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  geoseeq/sample.py,sha256=nlvmSy2WmiOMamkulNRloFPX7E9jVs34m1vO1PSOrHU,8336
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  geoseeq/search.py,sha256=gawad6Cx5FxJBPlYkXWb-UKAO-UC0_yhvyU9Ca1kaNI,3388
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- geoseeq/upload_download_manager.py,sha256=n9gghhN6WAlV6kpKXhR8inyKilo3vexRVWJSiwlujtI,9372
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+ geoseeq/upload_download_manager.py,sha256=TCdTKtQTPIakVuvpXa0OHgOBy7mtV0gHBqHDJYc2UO0,9361
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  geoseeq/user.py,sha256=tol8i1UGLRrbMw5jeJDnna1ikRgrCDd50Jxz0a1lSgg,690
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  geoseeq/utils.py,sha256=ZXpWb2MetUIeLrExiXb7IaOXYrW1pvrdP3o0KWzbwCs,4035
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  geoseeq/work_orders.py,sha256=5uLVVfdKE8qh4gGaHkdBpXJGRTujuSg59knWCqEET4A,8071
@@ -22,7 +22,7 @@ geoseeq/cli/detail.py,sha256=q8Suu-j2k18knfSVFG-SWWGNsKM-n8y9RMA3LcIIi9Y,4132
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  geoseeq/cli/download.py,sha256=W3OswqpHg1thzW6CJ7IcSS0Te2LA2WfgYISQMSl4GQg,18921
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  geoseeq/cli/fastq_utils.py,sha256=-bmeQLaiMBm57zWOF0R5OlWTU0_3sh1JBC1RYw2BOFM,3083
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  geoseeq/cli/get_eula.py,sha256=79mbUwyiF7O1r0g6UTxG9kJGQEqKuH805E6eLkPC6Y4,997
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- geoseeq/cli/main.py,sha256=Vf6c8exFrzRQfUggMvzNAdP98bDF1ekweoMGFsKzEs8,3922
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+ geoseeq/cli/main.py,sha256=v2ragOI9QbnXoMtb47IStgTOVcRBW8minvlM14Ag0WM,3922
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  geoseeq/cli/manage.py,sha256=wGXAcVaXqE5JQEU8Jh6OlHr02nB396bpS_SFcOZdrEo,5929
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  geoseeq/cli/progress_bar.py,sha256=p1Xl01nkYxSBZCB30ue2verIIi22W93m3ZAMAxipD0g,738
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  geoseeq/cli/project.py,sha256=V5SdXm2Hwo2lxrkpwRDedw-mAE4XnM2uwT-Gj1D90VQ,3030
@@ -85,9 +85,9 @@ geoseeq/vc/vc_stub.py,sha256=IQr8dI0zsWKVAeY_5ybDD6n49_3othcgfHS3P0O9tuY,3110
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  tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  tests/test_api_client.py,sha256=TS5njc5pcPP_Ycy-ljcfPVT1hQRBsFVdQ0lCqBmoesU,12810
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  tests/test_plotting.py,sha256=TcTu-2ARr8sxZJ7wPQxmbs3-gHw7uRvsgrhhhg0qKik,784
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- geoseeq-0.6.12.dev2.dist-info/LICENSE,sha256=IuhIl1XCxXLPLJT_coN1CNqQU4Khlq7x4IdW7ioOJD8,1067
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- geoseeq-0.6.12.dev2.dist-info/METADATA,sha256=lB84tEqqjrvgoJUV-DdiFSzFYxjKLtjr78vXQzRMUzg,4937
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- geoseeq-0.6.12.dev2.dist-info/WHEEL,sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8,91
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- geoseeq-0.6.12.dev2.dist-info/entry_points.txt,sha256=yF-6KDM8zXib4Al0qn49TX-qM7PUkWUIcYtsgt36rjM,45
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- geoseeq-0.6.12.dev2.dist-info/top_level.txt,sha256=zZk7mmeaqAYqFJG8nq2DTgSQPbflRjJwkDIhNURPDEU,14
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- geoseeq-0.6.12.dev2.dist-info/RECORD,,
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+ geoseeq-0.6.13.dev0.dist-info/LICENSE,sha256=IuhIl1XCxXLPLJT_coN1CNqQU4Khlq7x4IdW7ioOJD8,1067
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+ geoseeq-0.6.13.dev0.dist-info/METADATA,sha256=yT6Z6TV6oF9EpR4GdxtuzolpFlj50tlmdYLRJHL8vJo,4937
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+ geoseeq-0.6.13.dev0.dist-info/WHEEL,sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8,91
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+ geoseeq-0.6.13.dev0.dist-info/entry_points.txt,sha256=yF-6KDM8zXib4Al0qn49TX-qM7PUkWUIcYtsgt36rjM,45
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+ geoseeq-0.6.13.dev0.dist-info/top_level.txt,sha256=zZk7mmeaqAYqFJG8nq2DTgSQPbflRjJwkDIhNURPDEU,14
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+ geoseeq-0.6.13.dev0.dist-info/RECORD,,