geoseeq 0.5.6a6__py3-none-any.whl → 0.5.6a7__py3-none-any.whl

geoseeq/cli/main.py

@@ -53,7 +53,7 @@ def version():
     Use of this tool implies acceptance of the GeoSeeq End User License Agreement.
     Run `geoseeq eula show` to view the EULA.
     """
-    click.echo('0.5.6a6')  # remember to update setup
+    click.echo('0.5.6a7')  # remember to update setup
 
 
 @main.group('advanced')

geoseeq/result/file_download.py

@@ -87,7 +87,7 @@ class ResultFileDownload:
     def _download_flag_path(self, filename, flag_suffix='.gs_downloaded'):
         return filename + flag_suffix
         
-    def download_needs_update(self, filename, flag_suffix='.gs_downloaded'):
+    def download_needs_update(self, filename, flag_suffix='.gs_downloaded', slack=5):
         """Return True if the file needs to be downloaded, False otherwise.
         
         If either the file or the flag file does not exist, return True.
@@ -95,7 +95,7 @@ class ResultFileDownload:
         Otherwise, return False.
         """
         if isfile(filename) and isfile(self._download_flag_path(filename, flag_suffix)):
-            if getmtime(filename) > self.updated_at_timestamp:
+            if self.updated_at_timestamp - getmtime(self._download_flag_path(filename, flag_suffix)) > slack:
                 return True
             return False
         return True

{geoseeq-0.5.6a6.dist-info → geoseeq-0.5.6a7.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: geoseeq
-Version: 0.5.6a6
+Version: 0.5.6a7
 Summary: GeoSeeq command line tools and python API
 Author: David C. Danko
 Author-email: "David C. Danko" <dcdanko@biotia.io>

{geoseeq-0.5.6a6.dist-info → geoseeq-0.5.6a7.dist-info}/RECORD

@@ -22,7 +22,7 @@ geoseeq/cli/detail.py,sha256=q8Suu-j2k18knfSVFG-SWWGNsKM-n8y9RMA3LcIIi9Y,4132
 geoseeq/cli/download.py,sha256=ldpqpnRe00utb1EL1T_5CyPbFrZbtauIvOSOHtxz9qc,17656
 geoseeq/cli/fastq_utils.py,sha256=-bmeQLaiMBm57zWOF0R5OlWTU0_3sh1JBC1RYw2BOFM,3083
 geoseeq/cli/get_eula.py,sha256=79mbUwyiF7O1r0g6UTxG9kJGQEqKuH805E6eLkPC6Y4,997
-geoseeq/cli/main.py,sha256=dVKIq2lsDPga_ndZGO8xAOXlGbAjama4nWpWy4p7R-E,3259
+geoseeq/cli/main.py,sha256=ONd6tMTFSLtEQ8MiL53Ig2Gncindxmpcgm8MXBWWCE8,3259
 geoseeq/cli/manage.py,sha256=wGXAcVaXqE5JQEU8Jh6OlHr02nB396bpS_SFcOZdrEo,5929
 geoseeq/cli/progress_bar.py,sha256=p1Xl01nkYxSBZCB30ue2verIIi22W93m3ZAMAxipD0g,738
 geoseeq/cli/run.py,sha256=bx2AV6VIqOSTlxUda78xl0XxcZ8TXlQx02-e7iLQPwI,3838
@@ -63,7 +63,7 @@ geoseeq/plotting/map/map.py,sha256=h2QPLGqe-SamhfaTij53S9cQIiO8orCJUAUh0hRicSM,3
 geoseeq/plotting/map/overlay.py,sha256=4VmxqOESTQra9tPr8b8OLEUhJSit9lNipabeSznEYwE,1795
 geoseeq/result/__init__.py,sha256=IFHIyRV8ZzuKIfwfze1SXgcKwNMcSgMAknLHMkwjXIU,356
 geoseeq/result/bioinfo.py,sha256=QQtbyogrdro9avJSN0713sxLVnVeA24mFw3hWtKDKyw,1782
-geoseeq/result/file_download.py,sha256=PNLB7_l1aMd8jhSeyEMvNvqTgyCYqq6kzMMeSXaOdGc,5512
+geoseeq/result/file_download.py,sha256=XQA5bdQJJSZIgbFcN09OvVdLq12fnA98kPCIONAkLk0,5568
 geoseeq/result/file_upload.py,sha256=dl5T3bUNfb4JdotldAQxZV0wwYcA_XUTlHOApFl8Bgw,7390
 geoseeq/result/result_file.py,sha256=HG1gKpgIcWImWuf6LduVLEOyW_auuQ-dWld8MNOXGLE,8433
 geoseeq/result/result_folder.py,sha256=6porOXPh7Tpxw3oX5yMRPYQzNCGYqszqmFJd3SwQmTc,11122
@@ -80,9 +80,9 @@ geoseeq/vc/vc_stub.py,sha256=IQr8dI0zsWKVAeY_5ybDD6n49_3othcgfHS3P0O9tuY,3110
 tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 tests/test_api_client.py,sha256=TS5njc5pcPP_Ycy-ljcfPVT1hQRBsFVdQ0lCqBmoesU,12810
 tests/test_plotting.py,sha256=TcTu-2ARr8sxZJ7wPQxmbs3-gHw7uRvsgrhhhg0qKik,784
-geoseeq-0.5.6a6.dist-info/LICENSE,sha256=IuhIl1XCxXLPLJT_coN1CNqQU4Khlq7x4IdW7ioOJD8,1067
-geoseeq-0.5.6a6.dist-info/METADATA,sha256=2brnJbqA8P_-19lp49SnyPlTUwHetWLjh0I0WXG4qcE,4805
-geoseeq-0.5.6a6.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
-geoseeq-0.5.6a6.dist-info/entry_points.txt,sha256=yF-6KDM8zXib4Al0qn49TX-qM7PUkWUIcYtsgt36rjM,45
-geoseeq-0.5.6a6.dist-info/top_level.txt,sha256=zZk7mmeaqAYqFJG8nq2DTgSQPbflRjJwkDIhNURPDEU,14
-geoseeq-0.5.6a6.dist-info/RECORD,,
+geoseeq-0.5.6a7.dist-info/LICENSE,sha256=IuhIl1XCxXLPLJT_coN1CNqQU4Khlq7x4IdW7ioOJD8,1067
+geoseeq-0.5.6a7.dist-info/METADATA,sha256=2FR5sXg1kzhWv9LZHlcaKxgLUmGSeLpRdxqVZJN861A,4805
+geoseeq-0.5.6a7.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
+geoseeq-0.5.6a7.dist-info/entry_points.txt,sha256=yF-6KDM8zXib4Al0qn49TX-qM7PUkWUIcYtsgt36rjM,45
+geoseeq-0.5.6a7.dist-info/top_level.txt,sha256=zZk7mmeaqAYqFJG8nq2DTgSQPbflRjJwkDIhNURPDEU,14
+geoseeq-0.5.6a7.dist-info/RECORD,,